TCONS_00004880 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004880
Unique NameTCONS_00004880
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2077

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004880 ID=TCONS_00004880|Name=TCONS_00004880|organism=Clytia hemisphaerica|type=transcript|length=2077bp
AAAGAGTTTCACAAACAACAACATGTGAACAATGTTCAAACAGAAATAAA
CATTGTTGGTTCAGAAAGTGTGTCCATCTGTAGCCTCAAAACTAAACTTC
CAAGTTTATTCAGTagaatgaaattcaaaatggtagacatgGAAATGGCT
GTTAAGGAGCTGGATTCCATTAACATGTAGAGAAGAATGCTGTTGAAATG
CTAAATAAACGACATAATGTTACACTCAGAAATCGCTTCCGTATCTGTTT
GTATACATTCCTCTTCACATCCGCCATCTTGGTGTTCGCCGTCAATTCAT
GGTTCCAACAGAAAGATGACTTCCACGCTGCGGATGGAACAATATATAAC
TCGAGAAAATTACAAGAATACCGTCCAGAATGGTTTCGATCCTCTGCAGA
CTTGTATCGTCGTCAACTGACCCAAGATGCGAAAGCTCAAACACCAACAC
CCCCTTCGCAACAAACAAATCCTACTACTCAACCACCAACAGAATCACCA
ACCTTCTCTTCAACAGTCCCTTCAATATCAACATTCAGTTCGCAATACAC
TACCACACCATTCAACAAATCCACAACGAATAAAACTAGAAATGCAACCG
TCGACGAGTGTGACATGCCAGCCATCGCAGAATTCCCAGGAGACCTTTTC
ACACAGAAACAACGAATACACGGAGCTTTTTTAGTTCACGCTTTCATCGC
AATCTACATGTGTATAGCATTAGCCGTCATATGTGATTATTATTTTGTAC
CCTCACTGGAAGTGGTGTGTTATCGATTGGACTTGCAAGCTGATGTTGCT
GGAGCTTCATTGATGGCAATTGGGTCATCTGCTCCTGAACTTTTCGCCTC
CGTTATCGGTGTTTTTGTGACGAAAGGAGATATCGGGATAGGAACCATCC
TAGGatccgccatctttaatgttCTTCTGGTGATTGGGTTGTGTGGTGTG
CTAACCGGTTTCAATTTGGAACTAGCCTGGTGGCCATTGATGAGAGATGG
GATGTGTTACGCGTTTAGTCTAGTCATACTGGCCATTGTGATTGTCGATG
AACGAGTTGGATGgCTTGAAGCGGTGATCATGTTGGTATTTTATTTGTTG
TATTTGGTGTTAATGTGGAAGAATGAGAAGTTGGAGAAGTGGTTTTATTT
GTACGCAGGCTTGATGGAGACGTATGAAAAACGTTTCGGTGCGTTGGAAG
AAGAAACGAAcgatgaagaagatgaagagGAGCACAAGTTGACggaaaaa
gaacgaaaaagacATGAGAAATATCTAAAGATTGGCAAAGAAGGGGTCTA
TCACCCTCTTAGTCACACTGACTCCGaAATGAGCAGTGAAGATTCTATTG
ACGCCGTTTATCCTGACGATGATCCTTTCGTATTAACAGACATCCCCTCA
CGATGGACGGAGAAAATTGTGTGGGCGTTCCTTCTCCCCATCCGTGCATT
GTTCTACATCACCGTGCCCGATATCCGATACAAAAGCATGAGGCGTTTTT
TCTATCTGACTTTTTTCATGTCAATCGTTTGGATTGGTGTGACCACGTAT
ATTTTGGTTTGGATGACAACCGTGGTCGGTTTCACCTTCAGTATCCCCGA
TGCTGTGATGGGTTTGACTTTCATCGCGTTTGGTAGTAGTGTCCCTGATG
CCTTCGCAAGTATCATAGTTGCACAGCAAGGCAAAGGAGACATGGCAGTT
TCGCAAGCAATGGGGAGCAACGTGTTTGATATTCTTCTTGGTCTTGGCCT
GCCATGGATCCTCAAGACATTGATTTTCGACCCCGATTCGATCATCGAAG
TTCAGTCGGTCGGTCTCATCATTTCTTGTTTCGCAATCTTCATCAGTGTG
TTGTTCGTTATTGGTTGCTTTTATTATTATGAATTTAAACTGACCAAGAA
AATTGGTTGGGCGTTCATTGTGGCGTACTTTGTGGTGTTGTTGATATCTG
TTCTCTTGGAATTGTTCTTATGGAATAATTATCATCTTCCTACTTGTAAA
TATTTCTAGTTCTCAGCCTATTCTTATTATTGATGGTTCATGAGCTGAAA
ctgttttttatatgttttgtgATCAAG
Run BLAST on NCBI

protein sequence of TCONS_00004880-protein

>TCONS_00004880-protein ID=TCONS_00004880-protein|Name=TCONS_00004880-protein|organism=Clytia hemisphaerica|type=polypeptide|length=603bp
MLNKRHNVTLRNRFRICLYTFLFTSAILVFAVNSWFQQKDDFHAADGTIY
NSRKLQEYRPEWFRSSADLYRRQLTQDAKAQTPTPPSQQTNPTTQPPTES
PTFSSTVPSISTFSSQYTTTPFNKSTTNKTRNATVDECDMPAIAEFPGDL
FTQKQRIHGAFLVHAFIAIYMCIALAVICDYYFVPSLEVVCYRLDLQADV
AGASLMAIGSSAPELFASVIGVFVTKGDIGIGTILGSAIFNVLLVIGLCG
VLTGFNLELAWWPLMRDGMCYAFSLVILAIVIVDERVGWLEAVIMLVFYL
LYLVLMWKNEKLEKWFYLYAGLMETYEKRFGALEEETNDEEDEEEHKLTE
KERKRHEKYLKIGKEGVYHPLSHTDSEMSSEDSIDAVYPDDDPFVLTDIP
SRWTEKIVWAFLLPIRALFYITVPDIRYKSMRRFFYLTFFMSIVWIGVTT
YILVWMTTVVGFTFSIPDAVMGLTFIAFGSSVPDAFASIIVAQQGKGDMA
VSQAMGSNVFDILLGLGLPWILKTLIFDPDSIIEVQSVGLIISCFAIFIS
VLFVIGCFYYYEFKLTKKIGWAFIVAYFVVLLISVLLELFLWNNYHLPTC
KYF
Run BLAST on NCBI

transcript from alignment at sc0000049:704287..713182+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004880 ID=TCONS_00004880|Name=TCONS_00004880|organism=Clytia hemisphaerica|type=transcript|length=8896bp|location=Sequence derived from alignment at sc0000049:704287..713182+ (Clytia hemisphaerica)
AAAGAGTTTCACAAACAACAACATGTGAACAATGTTCAAACAGAAATAAA
CATTGTTGGTTCAGAAAGTGTGTCCATCTGTAGCCTCAAAACTAAACTTC
CAAGTTTATTCAGTagaatgaaattcaaaatggtagacatgGAAATGGCT
GTTAAGGAGCTGGATTCCATTAACATGTAGAGAAGGTATTTATGCATttc
gaaatttatttgattgtttGATGTTTCTTACATAGCAGACCCACGTTACG
ACCAAACCTCCTCACTATTCAAACCATGCACATTTCGCATTTCATCCAAA
GTTTAATTATAATGAGTAAATTCGAAACTACTCTTGActcttttgctttt
gttttcgaTAATTCTTTTAGCATTTCAACCCTACCGTTGTGTTCTTACCG
CGAAAGCTCTAAACATGTTATATATGCTTCAATGATTCAAGATTTTGATT
TAGTGTAGTGTATTTGTAGAACAGACATTTcgctttttgttttgttggct
tTATACCGGTCAAAGTGGCAGTGCTGATTCGTGAGGCTTGAGATCTCCTG
TGTTCACTTCTACATCTCCATTGCATCAtcaaaaactcactttttttagA
GAACTAGTAAATATTGGTTCAGTCTCCAGGCTATTAATAATTTTGCATAA
GTTTTCAGGCTTAAGTTCTTAATACGCTTAGGTTTTGACTGAAAAGAGAT
GGAATCCACTTTTTTCCTCATTGGAGGCTTGTATTGCCCTTACTCAATTC
TAAGTTTCAGTCCAATTTCTTCCTTATGTTTTCATggcatttttcattaa
aagaaaacgtgtaccaGAACGTTGGCTAAAAACATATTTCTATGAATATT
GCTTAGTGATACACGAATACATTGTCATGTCGTTTTGCCTGGTAGCTTGC
ATGTTATTTGCGCAGTTGCCATTCCTGTTCAAAGCACAAAAGTTTATATT
GTGTAAATGTCTTTATATTAAAATTCATTGCATTAGATTTTCTTCAGTTC
CCTGATTGAAATTTGTCGTTTGTTTTTAGAATGCTGTTGAAATGCTAAAT
AAACGACATAATGTTACACTCAGAAATCGCTTCCGTATCTGTTTGTATAC
ATTCCTCTTCACATCCGCCATCTTGGTGTTCGCCGTCAATTCATGGTTCC
AACAGAAAGATGACTTCCACGCTGCGGATGGAACAATATATAGtaagttt
tgttttaaatttcggCCACCTGGAAAGAAAGATTTACTCATGTATTTCCC
TTTCCTTGCTTACAAAAGAGTGGAATATTTCGAAATCTTGGACCGAAgta
cagtaaaacctccaaaTAACGGACACTTCGCAGACACTCTAAAGGGTGgt
cacctctgattagcggacaattatatttttccagccATTTCCTTGTCATA
TCCTCATGAAATAGTTTCCGAAAGGAGGACACGATCTCCTCAACATAGAG
GGTACAAagtttttctggaatagcccatttgaATAATCATTCTCTTGTTC
TTACATATCCTAGGGTCTCTAAAAAAGCACTTCGGACCAAAATTTTACAT
ACTTGCCTTGCCTTGCCTTGCCTTGCCTTGATTCATCCGTGAGGTGAATC
ATCGACAAAGTCTTTTTTCCACTTTTGACGATCTGACATGACTGTTAGCA
AATCTTTACCGGCAAGACCAGTTTCCTCTTCAATAATCAATNATTTTAGT
GTGAAACCTTAGTTAGAAGTAATCGAAGTTCGAAGAGCGTAATCCAAGAC
TATGACGAAAAGAAAGGGTGCGAGCGGATCGCCTTTTAGAACACCTGTTT
TAATGGAGAAAGGTTCGGTTTCTCCCTCTGGAGTGACAAATGAAGCGGTT
GTGTCTTTGTATAAGATTTTAATGGCATTAACGATAGTAACAGGAATTCC
GTAGGCGGTAAGAATCTCAAACATTCTTGAACGATTAACGGAGTCAAAGG
CTTTTCGAAAGTCAATGAATGATATGACGGCTTCTTTCTTGTGGTTTTTC
AGTTCTTCGACGATTCTTCTGAGGGCAAGGACATGNATGTTATCAATTTT
TCGGCTGGTTCGTTATGTCTTTAGACATGACCTGCAAGTTTGAGTCGCCG
TTGGCGTACAACCGATGTGATACGGGGAAGATTGCCGTAAATTTGTTGGA
TCGTAGCATGTTGTTGTCAAGAAATATTGTATATACGCCTTAGCATTTTA
GTATAAACTCCATCAAGTCGTTTACTTCGTTTGACATTGAGACACCAGGA
TTCGGATCCGNGATTTGCGATAGTGCAATACCTCTGTAGTTGTCTGTTTT
TGTTAGATCACCTTTTTTCGGGACTGGGATTAGATTTGCGATTCCCCGTT
CAGGAGGGCGATTGCCAAGGAAGGTTTTGTTGCAGAACTGATGGAGTTTT
TCTCTAGTCTTAGGCAATTTCCAAAACTCTGGAGGTAGCCCATCGGAACC
TGGGGCTTTTCCGTTTTTCAATTGTTGAGCTGCTTTGTCTGTTTCCTCTT
TAGAAAATAAGCCAGATGGGATTTCATTCCATTCATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAACCTTATGCACA
GGATCAGGAGCAGTCCGATTTTGAGGTTCTGAATTCaaaaggtttttgaa
atgaGTTTCCCAACATTTAAGGCGATTTTCTCCTTCAATGAAGATAACAC
TGCGAGCTTTTTTGCCAGAGATTTTCTTTCATGTTTCACTGATGAGGGTG
ATGCAGGgtgttcaaattattttaagatATCATTGATGCGAGTGTCTTCA
GATCTGTCGTAAGTGTTTCTTAGGTTGATTTGAGCTGTTTGAATAGCTCT
GGTTGATGCTCTTAAAGTGGCTTTCCGAGCAACTACTACATCGTGAACGT
CAGCAGAGTTTGTTTGAGGAGGACGATCCCTTGTAGGGAGAAGTTGAGAA
CCTATGGCAATTTTGACGAACGAAGCGTAAGTTTGTTGGTTTCTTGGAAG
GTTATCAAACTGGGTTTTAATTGAACTATCAACACGATTGGAGAGATTTT
TGTCCCTAGGTAGATATTGCCAGTATAACTTCTTCACAGTTGTAGGAGGA
GGGCGACGGACgctaagttttatttttgccgATACAATTCTGTGATCACT
GCCAACAGGATGAGAAGACGAAAATGCTTGACAATCAAGGACACTGTTTC
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGTCCAAAGTTTCGCCG
TAGGTTTCTGAAAGGACGTATTTCCAATGATTAGATTGAATTGATTAGTA
AAATCTTGTAGGAAAACACCATTTCTGTCGGTTATAGTGTGCAAAGAAAA
TCTGTTGTTAGTTCTTGCGTTCATATCTCCACCAATGATCAGCATATGGT
GGGGAGGGATCGTATCAACGATGTGACATAAATCATCGTAAAAATCAGAA
ACCATTTCTTCGGGTAGTGAATTATGTGGGGAATAGCATgaaatgatgac
agttttgggATTTCCTTTGAAGGTTGCGATAACAATACGTTCGTTGATTT
TCTTTACTGATAAAAGAATGGGAAGAAGTTTAGAGTTAATGGCGATGCCA
GCACCATGAAAAGCAGCACCTTGATCGTTACGTTTGGCAGAAGCAGTGAA
CAGTGTAGATGAGCCAAGATTATGAGCAACGATGTCAGGGTCTGTAGGTT
TATGAACAAATCTGTGTTCTTGAATACAAGTAATATCAATGGTTTGTGAA
TGAAGGAGCTTATTGAGTTCAACTATAGACGAGTCGGTTTGTAGTGTTCT
ACAATTTAATGATGCGACTTTGAACATCTTGGAAGGTTTGGAAAGGCCAT
TTTTACGATTGCGAGCATCAGAGTTTCTCCGCCGATTATGGTTGAAGATA
GTCTCGTCATTGGTTACATTTGCAACAGGGTCGGATCGGTTTAATGGCTG
AGAGTCAAGGGCTTTAACCTTGGTGCTATTAGTGGACTTTGTCATGCTTT
TTCTAATGGCTAAGATTGAAGTGAGCGGCTCGCCACACCTGTTCACCTGA
TACGGTTCCCATGTACTAGGGCGGTATGCCTTCCCGTTGTCNTGTTCACC
TGATACGGTCCCCATGTACTAGGGCCGTATGCCTTCCCGTTGTCATCAGA
AGACGATCTTCCGTGAAGccacgttgtttcgacgttttcgAAGTTTTTCA
GCCCTTAGGAAGTTTTACATACTTAACCCCTTATTAGTAGGTACATTATA
CCATAATTGTTATTGCTATTGATGGTATCTGATGTTGTCTTCTTTCCAGA
CTCGAGAAAATTACAAGAATACCGTCCAGAATGGTTTCGATCCTCTGCAG
ACTTGTATCGTCGTCAACTGACCCAAGATGCGAAAGCTCAAACACCAACA
CCCCCTTCGCAACAAACAAATCCTACTACTCAACCACCAACAGAATCACC
AACCTTCTCTTCAACAGTCCCTTCAATATCAACATTCAGTTCGCAATACA
CTACCACACCATTCAACAAATCCACAACGAATAAAACTAGAAATGCAACC
GTCGACGAGTGTGACATGCCAGCCATCGCAGAATTCCCAGGAGACCTTTT
CACACAGAAACAACGAATACACGGAGCTTTTTTAGTTCACGCTTTCATCG
CAATCTACATGTGTATAGCATTAGCCGTCATATGTGATTATTATTTTGTA
CCCTCACTGGAAGTGGTGTGTTATCGATTGGACTTGCAAGCTGATGTTGC
TGGAGCTTCATTGATGGCAATTGGGTCATCTGCTCCTGAACTTTTCGCCT
CCGTTATCGGTAAGAAcgccttaagggctctgaccatagtgaatttttca
taattgctgtgtttaaaatgtgttttctgactgatgtaaccaacaaaaat
atggcatgttatacattttctgttagacaaactattcctgaatctgaaaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaataaaa
atttttgcggaaaatatttgtaaatgcttctttgtctcgaaatcttcaaa
atagtggtgtTTCATCAATTtctcatctggattttgcttaaaaaaacagt
cataacttttgacacatctttttagaaaagttttccgcaaaatttacaat
agttcaattctttgcggacagtttgaaaaaagttcaagacaaaaaggtta
attacccattaaaacttagcactttttataaaagaaggtgatgcaacata
ttattaacgtctttttaaagttaataacgtcatttttgcaattaagttct
taattactcttaaggggtttgattaaaaagcaatttataaaggcaattct
ttgttaaaagtgttaaagaatctaaaacataacttttatgctcagatact
aaaattatttttctgactatggtcagagcccttaaatattTCAGCTAATA
TTTGTCGGCTAAAAGAAACAACGTGGATGAACGATACTCtacaaaaatat
gtcaaatgACGTCATATGAAAGATGACATCACGAGCATCTCTGTTGATAT
CTTTTAAACCGAATTTCCTAAGCAAGGTTTAAATCGCATGGATGGGTATC
ACTATGGAAAATATACCCATCGAagtaaatatttctttattattATCAGG
TGTTTTTGTGACGAAAGGAGATATCGGGATAGGAACCATCCTAGGatccg
ccatctttaatgttCTTCTGGTGATTGGGTTGTGTGGTGTGCTAACCGGT
TTCGTAAGTATAATGATGACTTgacaagattttttattttactttctaTA
TTTTactttgcaaatttttgttgaaataaaAGGTAAGTGTCTGATGTATT
GTGGTGTTGCTTTCCCTTTTTCACCGGCATGATTTAGCCAACGGACTTTC
ttgtaaacaaacaaataatttttttattactagAATTTGGAACTAGCCTG
GTGGCCATTGATGAGAGATGGGATGTGTTACGCGTTTAGTCTAGTCATAC
TGGCCATTGTGATTGTCGATGAACGAGTTGGATGGTAAGACAATTTATGT
ATTATCATAAGAAATAAAACGAtcccagaaaaaaataatttgttcacctg
ttttaacaaaaatccgaaaatccACAATTTTTAAGGTTAGTGTTTAAGTT
TTTGATAATTTCTGGCAACCTATATGGTGCCTGGTAACAAGCTGTTCAAA
CCTCTGTAGTAAGCACCCTCCTTATACAAGTAATTCTGAAACGCTCCCCA
GTCGATAAAATTGTCCATATAACCTCCATAACTTAATTCATCGGAGTTCA
TAATGTGGACATTGGACCAACTAACGTTGGCTTGGCAAATGAAGCTTTac
attgtgttttttttcttccaggCTTGAAGCGGTGATCATGTTGGTATTTT
ATTTGTTGTATTTGGTGTTAATGTGGAAGAATGAGAAGTTGGAGAAGTGG
TTTTATTTGTACGCAGGCTTGATGGAGACGTATGAAAAACGTTTCGGTGC
GTTGGAAGAAGAAACGAAcgatgaagaagatgaagagGAGCACAAGTTGA
CggaaaaagaacgaaaaagacATGAGAAATATCTAAAGATTGGCAAAGAA
GGGGTCTATCACCCTCTTAGTCACACTGACTCCGGTAAGTCCTCTTCTGC
TATACTTGTGACAATGTAGAATCTTCCTCTAACTTGCCATCCCAGAAGaa
actttttcgaaatttgtaaGTTTTTTTCAGGCAGCAGAATGTGAAAAACA
ATCTTACGATTTGCTTTTGATAACTAAAGAGTGATTTCTCGACCTGAGTA
CATCTCTCTGGCCACTTGCTCGGAAATTGATATTTTCCTCTGTTTTAGCA
AATCCAACATTCTTGATATGCTATTGGAATTTTACAGGCTCATTTCATCC
ATCACATAcaaattatttgtttttagaAATGAGCAGTGAAGATTCTATTG
ACGCCGTTTATCCTGACGATGATCCTTTCGTATTAACAGACATCCCCTCA
CGATGGACGGAGAAAATTGTGTGGGCGTTCCTTCTCCCCATCCGTGCATT
GTTCTACATCACCGTGCCCGATATCCGATACAAAAGCATGAGGCGTTTTT
TCTATCTGACTTTTTTCATGTCAATCGTTTGGATTGGTGTGACCACGTAT
ATTTTGGTTTGGATGACAACCGTGGTCGGTTTCACCTTCAGTATCCCCGA
TGCTGTGATGGGTTTGACTTTCATCGCGTTTGGTAGTAGTGTCCCTGATG
CCTTCGCAAGTATCATAGTTGCACAGCAAGGTGAGAATACTTCCAATATT
CCATGATTGAAAGTCCTTCTATATTGCCAACACGTGCATAAAAACGAATT
acacacccctgcctcacatagccccggtgaaacttttcgTCACAGCGGGG
ATAGAAATTTCTATCGGAATCTCAATggggaaaaatatttattgtcCCAA
GATCAAAAAATAACGTGGGGATTgatttggagtgcaatttttaaacattg
aatttcgaatggggtgaaatcaaagtcaaattccGAGTTgggtagacgat
cctatcgtctacacaagatcactaaaaaagggaatagtttaggagaggcg
tgataaattcgggtgatgtaagcagtggcggagatgtttacagttccaaa
actctaccacCACTTTTtccccgtaaaccgccctgacgcccgaACTTTTT
CCCGTGTTTACTgacctttaaacggacgatagcatcgtctacgaATTgcg
ctgaaattgtagggtacttttctcaccggggacgaaatttttgccaaatt
ttcaagtGAGGCGGAGGTAACCCAGggtctgtgaaacaggggtgtaataa
CTAAACCGGAGACTGGTAGTTCCTCTATAAAAATTTTCTCTCTCCTATCT
ACATTTTTACTTTCGTAAAAGTTTCAAATCGTGTAGTCATAAAGGTCAAA
TCTGACTTTTCTCGTCCTGGTCAGAAACGATGTTATGAAAATTGCtctat
gaaaaaattttcctgaatgatgaatattagaaaaaatctactattgatga
aaaatttcttttccgtCAATTGACCCTCTCTATCTGTTCATCATTACAGG
CAAAGGAGACATGGCAGTTTCGCAAGCAATGGGGAGCAACGTGTTTGATA
TTCTTCTTGGTCTTGGCCTGCCATGGATCCTCAAGACATTGATTTTCGAC
CCCGATTCGATCATCGAAGTTCAGTCGGTCGGTCTCATCATTTCTTGTTT
CGCAATCTTCATCAGTGTGTTGTTCGTTATTGGTTGCTTTTATTATTATG
AATTTAAACTGACCAAGAAAATTGGTTGGGCGTTCATTGTGGCGTACTTT
GTGGTGTTGTTGATATCTGTTCTCTTGGAATTGTTCTTATGGAATAATTA
TCATCTTCCTACTTGTAAATATTTCTAGTTCTCAGCCTATTCTTATTATT
GATGGTTCATGAGCTGAAActgttttttatatgttttgtgATCAAG

Coding sequence (CDS) from alignment at sc0000049:704287..713182+

>TCONS_00004880 ID=TCONS_00004880|Name=TCONS_00004880|organism=Clytia hemisphaerica|type=CDS|length=12684bp|location=Sequence derived from alignment at sc0000049:704287..713182+ (Clytia hemisphaerica)
ATGCTAAATAAACGACATAATGTTACACTCAGAAATCGCTTCCGTATCTG
TTTGTATACATTCCTCTTCACATCCGCCATCTTGGTGTTCGCCGTCAATT
CATGGTTCCAACAGAAAGATGACTTCCACGCTGCGGATGGAACAATATAT
AACTCGAGAAAATTACAAGAATACCGTCCAGAATGGTTTCGATCCTCTGC
AGACTTGTATCGTCGTCAACTGACCCAAGATGCGAAAGCTCAAACACCAA
CACCCCCTTCGCAACAAACAAATCCTACTACTCAACCACCAACAGAATCA
CCAACCTTCTCTTCAACAGTCCCTTCAATATCAACATTCAGTTCGCAATA
CACTACCACACCATTCAACAAATCCACAACGAATAAAACTAGAAATGCAA
CCGTCGACGAGTGTGACATGCCAGCCATCGCAGAATTCCCAGGAGACCTT
TTCACACAGAAACAACGAATACACGGAGCTTTTTTAGTTCACGCTTTCAT
CGCAATCTACATGTGTATAGCATTAGCCGTCATATGTGATTATTATTTTG
TACCCTCACTGGAAGTGGTGTGTTATCGATTGGACTTGCAAGCTGATGTT
GCTGGAGCTTCATTGATGGCAATTGGGTCATCTGCTCCTGAACTTTTCGC
CTCCGTTATCGGTGTTTTTGTGACGAAAGGAGATATCGGGATAGGAACCA
TCCTAGGatccgccatctttaatgttCTTCTGGTGATTGGGTTGTGTGGT
GTGCTAACCGGTTTCAATTTGGAACTAGCCTGGTGGCCATTGATGAGAGA
TGGGATGTGTTACGCGTTTAGTCTAGTCATACTGGCCATTGTGATTGTCG
ATGAACGAGTTGGATGgCTTGAAGCGGTGATCATGTTGGTATTTTATTTG
TTGTATTTGGTGTTAATGTGGAAGAATGAGAAGTTGGAGAAGTGGTTTTA
TTTGTACGCAGGCTTGATGGAGACGTATGAAAAACGTTTCGGTGCGTTGG
AAGAAGAAACGAAcgatgaagaagatgaagagGAGCACAAGTTGACggaa
aaagaacgaaaaagacATGAGAAATATCTAAAGATTGGCAAAGAAGGGGT
CTATCACCCTCTTAGTCACACTGACTCCGaAATGAGCAGTGAAGATTCTA
TTGACGCCGTTTATCCTGACGATGATCCTTTCGTATTAACAGACATCCCC
TCACGATGGACGGAGAAAATTGTGTGGGCGTTCCTTCTCCCCATCCGTGC
ATTGTTCTACATCACCGTGCCCGATATCCGATACAAAAGCATGAGGCGTT
TTTTCTATCTGACTTTTTTCATGTCAATCGTTTGGATTGGTGTGACCACG
TATATTTTGGTTTGGATGACAACCGTGGTCGGTTTCACCTTCAGTATCCC
CGATGCTGTGATGGGTTTGACTTTCATCGCGTTTGGTAGTAGTGTCCCTG
ATGCCTTCGCAAGTATCATAGTTGCACAGCAAGGCAAAGGAGACATGGCA
GTTTCGCAAGCAATGGGGAGCAACGTGTTTGATATTCTTCTTGGTCTTGG
CCTGCCATGGATCCTCAAGACATTGATTTTCGACCCCGATTCGATCATCG
AAGTTCAGTCGGTCGGTCTCATCATTTCTTGTTTCGCAATCTTCATCAGT
GTGTTGTTCGTTATTGGTTGCTTTTATTATTATGAATTTAAACTGACCAA
GAAAATTGGTTGGGCGTTCATTGTGGCGTACTTTGTGGTGTTGTTGATAT
CTGTTCTCTTGGAATTGTTCTTATGGAATAATTATCATCTTCCTACTTGT
AAATATTTCTAGATGCTAAATAAACGACATAATGTTACACTCAGAAATCG
CTTCCGTATCTGTTTGTATACATTCCTCTTCACATCCGCCATCTTGGTGT
TCGCCGTCAATTCATGGTTCCAACAGAAAGATGACTTCCACGCTGCGGAT
GGAACAATATATAACTCGAGAAAATTACAAGAATACCGTCCAGAATGGTT
TCGATCCTCTGCAGACTTGTATCGTCGTCAACTGACCCAAGATGCGAAAG
CTCAAACACCAACACCCCCTTCGCAACAAACAAATCCTACTACTCAACCA
CCAACAGAATCACCAACCTTCTCTTCAACAGTCCCTTCAATATCAACATT
CAGTTCGCAATACACTACCACACCATTCAACAAATCCACAACGAATAAAA
CTAGAAATGCAACCGTCGACGAGTGTGACATGCCAGCCATCGCAGAATTC
CCAGGAGACCTTTTCACACAGAAACAACGAATACACGGAGCTTTTTTAGT
TCACGCTTTCATCGCAATCTACATGTGTATAGCATTAGCCGTCATATGTG
ATTATTATTTTGTACCCTCACTGGAAGTGGTGTGTTATCGATTGGACTTG
CAAGCTGATGTTGCTGGAGCTTCATTGATGGCAATTGGGTCATCTGCTCC
TGAACTTTTCGCCTCCGTTATCGGTGTTTTTGTGACGAAAGGAGATATCG
GGATAGGAACCATCCTAGGatccgccatctttaatgttCTTCTGGTGATT
GGGTTGTGTGGTGTGCTAACCGGTTTCAATTTGGAACTAGCCTGGTGGCC
ATTGATGAGAGATGGGATGTGTTACGCGTTTAGTCTAGTCATACTGGCCA
TTGTGATTGTCGATGAACGAGTTGGATGgCTTGAAGCGGTGATCATGTTG
GTATTTTATTTGTTGTATTTGGTGTTAATGTGGAAGAATGAGAAGTTGGA
GAAGTGGTTTTATTTGTACGCAGGCTTGATGGAGACGTATGAAAAACGTT
TCGGTGCGTTGGAAGAAGAAACGAAcgatgaagaagatgaagagGAGCAC
AAGTTGACggaaaaagaacgaaaaagacATGAGAAATATCTAAAGATTGG
CAAAGAAGGGGTCTATCACCCTCTTAGTCACACTGACTCCGaAATGAGCA
GTGAAGATTCTATTGACGCCGTTTATCCTGACGATGATCCTTTCGTATTA
ACAGACATCCCCTCACGATGGACGGAGAAAATTGTGTGGGCGTTCCTTCT
CCCCATCCGTGCATTGTTCTACATCACCGTGCCCGATATCCGATACAAAA
GCATGAGGCGTTTTTTCTATCTGACTTTTTTCATGTCAATCGTTTGGATT
GGTGTGACCACGTATATTTTGGTTTGGATGACAACCGTGGTCGGTTTCAC
CTTCAGTATCCCCGATGCTGTGATGGGTTTGACTTTCATCGCGTTTGGTA
GTAGTGTCCCTGATGCCTTCGCAAGTATCATAGTTGCACAGCAAGGCAAA
GGAGACATGGCAGTTTCGCAAGCAATGGGGAGCAACGTGTTTGATATTCT
TCTTGGTCTTGGCCTGCCATGGATCCTCAAGACATTGATTTTCGACCCCG
ATTCGATCATCGAAGTTCAGTCGGTCGGTCTCATCATTTCTTGTTTCGCA
ATCTTCATCAGTGTGTTGTTCGTTATTGGTTGCTTTTATTATTATGAATT
TAAACTGACCAAGAAAATTGGTTGGGCGTTCATTGTGGCGTACTTTGTGG
TGTTGTTGATATCTGTTCTCTTGGAATTGTTCTTATGGAATAATTATCAT
CTTCCTACTTGTAAATATTTCTAGATGCTAAATAAACGACATAATGTTAC
ACTCAGAAATCGCTTCCGTATCTGTTTGTATACATTCCTCTTCACATCCG
CCATCTTGGTGTTCGCCGTCAATTCATGGTTCCAACAGAAAGATGACTTC
CACGCTGCGGATGGAACAATATATAACTCGAGAAAATTACAAGAATACCG
TCCAGAATGGTTTCGATCCTCTGCAGACTTGTATCGTCGTCAACTGACCC
AAGATGCGAAAGCTCAAACACCAACACCCCCTTCGCAACAAACAAATCCT
ACTACTCAACCACCAACAGAATCACCAACCTTCTCTTCAACAGTCCCTTC
AATATCAACATTCAGTTCGCAATACACTACCACACCATTCAACAAATCCA
CAACGAATAAAACTAGAAATGCAACCGTCGACGAGTGTGACATGCCAGCC
ATCGCAGAATTCCCAGGAGACCTTTTCACACAGAAACAACGAATACACGG
AGCTTTTTTAGTTCACGCTTTCATCGCAATCTACATGTGTATAGCATTAG
CCGTCATATGTGATTATTATTTTGTACCCTCACTGGAAGTGGTGTGTTAT
CGATTGGACTTGCAAGCTGATGTTGCTGGAGCTTCATTGATGGCAATTGG
GTCATCTGCTCCTGAACTTTTCGCCTCCGTTATCGGTGTTTTTGTGACGA
AAGGAGATATCGGGATAGGAACCATCCTAGGatccgccatctttaatgtt
CTTCTGGTGATTGGGTTGTGTGGTGTGCTAACCGGTTTCAATTTGGAACT
AGCCTGGTGGCCATTGATGAGAGATGGGATGTGTTACGCGTTTAGTCTAG
TCATACTGGCCATTGTGATTGTCGATGAACGAGTTGGATGgCTTGAAGCG
GTGATCATGTTGGTATTTTATTTGTTGTATTTGGTGTTAATGTGGAAGAA
TGAGAAGTTGGAGAAGTGGTTTTATTTGTACGCAGGCTTGATGGAGACGT
ATGAAAAACGTTTCGGTGCGTTGGAAGAAGAAACGAAcgatgaagaagat
gaagagGAGCACAAGTTGACggaaaaagaacgaaaaagacATGAGAAATA
TCTAAAGATTGGCAAAGAAGGGGTCTATCACCCTCTTAGTCACACTGACT
CCGaAATGAGCAGTGAAGATTCTATTGACGCCGTTTATCCTGACGATGAT
CCTTTCGTATTAACAGACATCCCCTCACGATGGACGGAGAAAATTGTGTG
GGCGTTCCTTCTCCCCATCCGTGCATTGTTCTACATCACCGTGCCCGATA
TCCGATACAAAAGCATGAGGCGTTTTTTCTATCTGACTTTTTTCATGTCA
ATCGTTTGGATTGGTGTGACCACGTATATTTTGGTTTGGATGACAACCGT
GGTCGGTTTCACCTTCAGTATCCCCGATGCTGTGATGGGTTTGACTTTCA
TCGCGTTTGGTAGTAGTGTCCCTGATGCCTTCGCAAGTATCATAGTTGCA
CAGCAAGGCAAAGGAGACATGGCAGTTTCGCAAGCAATGGGGAGCAACGT
GTTTGATATTCTTCTTGGTCTTGGCCTGCCATGGATCCTCAAGACATTGA
TTTTCGACCCCGATTCGATCATCGAAGTTCAGTCGGTCGGTCTCATCATT
TCTTGTTTCGCAATCTTCATCAGTGTGTTGTTCGTTATTGGTTGCTTTTA
TTATTATGAATTTAAACTGACCAAGAAAATTGGTTGGGCGTTCATTGTGG
CGTACTTTGTGGTGTTGTTGATATCTGTTCTCTTGGAATTGTTCTTATGG
AATAATTATCATCTTCCTACTTGTAAATATTTCTAGATGCTAAATAAACG
ACATAATGTTACACTCAGAAATCGCTTCCGTATCTGTTTGTATACATTCC
TCTTCACATCCGCCATCTTGGTGTTCGCCGTCAATTCATGGTTCCAACAG
AAAGATGACTTCCACGCTGCGGATGGAACAATATATAACTCGAGAAAATT
ACAAGAATACCGTCCAGAATGGTTTCGATCCTCTGCAGACTTGTATCGTC
GTCAACTGACCCAAGATGCGAAAGCTCAAACACCAACACCCCCTTCGCAA
CAAACAAATCCTACTACTCAACCACCAACAGAATCACCAACCTTCTCTTC
AACAGTCCCTTCAATATCAACATTCAGTTCGCAATACACTACCACACCAT
TCAACAAATCCACAACGAATAAAACTAGAAATGCAACCGTCGACGAGTGT
GACATGCCAGCCATCGCAGAATTCCCAGGAGACCTTTTCACACAGAAACA
ACGAATACACGGAGCTTTTTTAGTTCACGCTTTCATCGCAATCTACATGT
GTATAGCATTAGCCGTCATATGTGATTATTATTTTGTACCCTCACTGGAA
GTGGTGTGTTATCGATTGGACTTGCAAGCTGATGTTGCTGGAGCTTCATT
GATGGCAATTGGGTCATCTGCTCCTGAACTTTTCGCCTCCGTTATCGGTG
TTTTTGTGACGAAAGGAGATATCGGGATAGGAACCATCCTAGGatccgcc
atctttaatgttCTTCTGGTGATTGGGTTGTGTGGTGTGCTAACCGGTTT
CAATTTGGAACTAGCCTGGTGGCCATTGATGAGAGATGGGATGTGTTACG
CGTTTAGTCTAGTCATACTGGCCATTGTGATTGTCGATGAACGAGTTGGA
TGgCTTGAAGCGGTGATCATGTTGGTATTTTATTTGTTGTATTTGGTGTT
AATGTGGAAGAATGAGAAGTTGGAGAAGTGGTTTTATTTGTACGCAGGCT
TGATGGAGACGTATGAAAAACGTTTCGGTGCGTTGGAAGAAGAAACGAAc
gatgaagaagatgaagagGAGCACAAGTTGACggaaaaagaacgaaaaag
acATGAGAAATATCTAAAGATTGGCAAAGAAGGGGTCTATCACCCTCTTA
GTCACACTGACTCCGaAATGAGCAGTGAAGATTCTATTGACGCCGTTTAT
CCTGACGATGATCCTTTCGTATTAACAGACATCCCCTCACGATGGACGGA
GAAAATTGTGTGGGCGTTCCTTCTCCCCATCCGTGCATTGTTCTACATCA
CCGTGCCCGATATCCGATACAAAAGCATGAGGCGTTTTTTCTATCTGACT
TTTTTCATGTCAATCGTTTGGATTGGTGTGACCACGTATATTTTGGTTTG
GATGACAACCGTGGTCGGTTTCACCTTCAGTATCCCCGATGCTGTGATGG
GTTTGACTTTCATCGCGTTTGGTAGTAGTGTCCCTGATGCCTTCGCAAGT
ATCATAGTTGCACAGCAAGGCAAAGGAGACATGGCAGTTTCGCAAGCAAT
GGGGAGCAACGTGTTTGATATTCTTCTTGGTCTTGGCCTGCCATGGATCC
TCAAGACATTGATTTTCGACCCCGATTCGATCATCGAAGTTCAGTCGGTC
GGTCTCATCATTTCTTGTTTCGCAATCTTCATCAGTGTGTTGTTCGTTAT
TGGTTGCTTTTATTATTATGAATTTAAACTGACCAAGAAAATTGGTTGGG
CGTTCATTGTGGCGTACTTTGTGGTGTTGTTGATATCTGTTCTCTTGGAA
TTGTTCTTATGGAATAATTATCATCTTCCTACTTGTAAATATTTCTAGAT
GCTAAATAAACGACATAATGTTACACTCAGAAATCGCTTCCGTATCTGTT
TGTATACATTCCTCTTCACATCCGCCATCTTGGTGTTCGCCGTCAATTCA
TGGTTCCAACAGAAAGATGACTTCCACGCTGCGGATGGAACAATATATAA
CTCGAGAAAATTACAAGAATACCGTCCAGAATGGTTTCGATCCTCTGCAG
ACTTGTATCGTCGTCAACTGACCCAAGATGCGAAAGCTCAAACACCAACA
CCCCCTTCGCAACAAACAAATCCTACTACTCAACCACCAACAGAATCACC
AACCTTCTCTTCAACAGTCCCTTCAATATCAACATTCAGTTCGCAATACA
CTACCACACCATTCAACAAATCCACAACGAATAAAACTAGAAATGCAACC
GTCGACGAGTGTGACATGCCAGCCATCGCAGAATTCCCAGGAGACCTTTT
CACACAGAAACAACGAATACACGGAGCTTTTTTAGTTCACGCTTTCATCG
CAATCTACATGTGTATAGCATTAGCCGTCATATGTGATTATTATTTTGTA
CCCTCACTGGAAGTGGTGTGTTATCGATTGGACTTGCAAGCTGATGTTGC
TGGAGCTTCATTGATGGCAATTGGGTCATCTGCTCCTGAACTTTTCGCCT
CCGTTATCGGTGTTTTTGTGACGAAAGGAGATATCGGGATAGGAACCATC
CTAGGatccgccatctttaatgttCTTCTGGTGATTGGGTTGTGTGGTGT
GCTAACCGGTTTCAATTTGGAACTAGCCTGGTGGCCATTGATGAGAGATG
GGATGTGTTACGCGTTTAGTCTAGTCATACTGGCCATTGTGATTGTCGAT
GAACGAGTTGGATGgCTTGAAGCGGTGATCATGTTGGTATTTTATTTGTT
GTATTTGGTGTTAATGTGGAAGAATGAGAAGTTGGAGAAGTGGTTTTATT
TGTACGCAGGCTTGATGGAGACGTATGAAAAACGTTTCGGTGCGTTGGAA
GAAGAAACGAAcgatgaagaagatgaagagGAGCACAAGTTGACggaaaa
agaacgaaaaagacATGAGAAATATCTAAAGATTGGCAAAGAAGGGGTCT
ATCACCCTCTTAGTCACACTGACTCCGaAATGAGCAGTGAAGATTCTATT
GACGCCGTTTATCCTGACGATGATCCTTTCGTATTAACAGACATCCCCTC
ACGATGGACGGAGAAAATTGTGTGGGCGTTCCTTCTCCCCATCCGTGCAT
TGTTCTACATCACCGTGCCCGATATCCGATACAAAAGCATGAGGCGTTTT
TTCTATCTGACTTTTTTCATGTCAATCGTTTGGATTGGTGTGACCACGTA
TATTTTGGTTTGGATGACAACCGTGGTCGGTTTCACCTTCAGTATCCCCG
ATGCTGTGATGGGTTTGACTTTCATCGCGTTTGGTAGTAGTGTCCCTGAT
GCCTTCGCAAGTATCATAGTTGCACAGCAAGGCAAAGGAGACATGGCAGT
TTCGCAAGCAATGGGGAGCAACGTGTTTGATATTCTTCTTGGTCTTGGCC
TGCCATGGATCCTCAAGACATTGATTTTCGACCCCGATTCGATCATCGAA
GTTCAGTCGGTCGGTCTCATCATTTCTTGTTTCGCAATCTTCATCAGTGT
GTTGTTCGTTATTGGTTGCTTTTATTATTATGAATTTAAACTGACCAAGA
AAATTGGTTGGGCGTTCATTGTGGCGTACTTTGTGGTGTTGTTGATATCT
GTTCTCTTGGAATTGTTCTTATGGAATAATTATCATCTTCCTACTTGTAA
ATATTTCTAGATGCTAAATAAACGACATAATGTTACACTCAGAAATCGCT
TCCGTATCTGTTTGTATACATTCCTCTTCACATCCGCCATCTTGGTGTTC
GCCGTCAATTCATGGTTCCAACAGAAAGATGACTTCCACGCTGCGGATGG
AACAATATATAACTCGAGAAAATTACAAGAATACCGTCCAGAATGGTTTC
GATCCTCTGCAGACTTGTATCGTCGTCAACTGACCCAAGATGCGAAAGCT
CAAACACCAACACCCCCTTCGCAACAAACAAATCCTACTACTCAACCACC
AACAGAATCACCAACCTTCTCTTCAACAGTCCCTTCAATATCAACATTCA
GTTCGCAATACACTACCACACCATTCAACAAATCCACAACGAATAAAACT
AGAAATGCAACCGTCGACGAGTGTGACATGCCAGCCATCGCAGAATTCCC
AGGAGACCTTTTCACACAGAAACAACGAATACACGGAGCTTTTTTAGTTC
ACGCTTTCATCGCAATCTACATGTGTATAGCATTAGCCGTCATATGTGAT
TATTATTTTGTACCCTCACTGGAAGTGGTGTGTTATCGATTGGACTTGCA
AGCTGATGTTGCTGGAGCTTCATTGATGGCAATTGGGTCATCTGCTCCTG
AACTTTTCGCCTCCGTTATCGGTGTTTTTGTGACGAAAGGAGATATCGGG
ATAGGAACCATCCTAGGatccgccatctttaatgttCTTCTGGTGATTGG
GTTGTGTGGTGTGCTAACCGGTTTCAATTTGGAACTAGCCTGGTGGCCAT
TGATGAGAGATGGGATGTGTTACGCGTTTAGTCTAGTCATACTGGCCATT
GTGATTGTCGATGAACGAGTTGGATGgCTTGAAGCGGTGATCATGTTGGT
ATTTTATTTGTTGTATTTGGTGTTAATGTGGAAGAATGAGAAGTTGGAGA
AGTGGTTTTATTTGTACGCAGGCTTGATGGAGACGTATGAAAAACGTTTC
GGTGCGTTGGAAGAAGAAACGAAcgatgaagaagatgaagagGAGCACAA
GTTGACggaaaaagaacgaaaaagacATGAGAAATATCTAAAGATTGGCA
AAGAAGGGGTCTATCACCCTCTTAGTCACACTGACTCCGaAATGAGCAGT
GAAGATTCTATTGACGCCGTTTATCCTGACGATGATCCTTTCGTATTAAC
AGACATCCCCTCACGATGGACGGAGAAAATTGTGTGGGCGTTCCTTCTCC
CCATCCGTGCATTGTTCTACATCACCGTGCCCGATATCCGATACAAAAGC
ATGAGGCGTTTTTTCTATCTGACTTTTTTCATGTCAATCGTTTGGATTGG
TGTGACCACGTATATTTTGGTTTGGATGACAACCGTGGTCGGTTTCACCT
TCAGTATCCCCGATGCTGTGATGGGTTTGACTTTCATCGCGTTTGGTAGT
AGTGTCCCTGATGCCTTCGCAAGTATCATAGTTGCACAGCAAGGCAAAGG
AGACATGGCAGTTTCGCAAGCAATGGGGAGCAACGTGTTTGATATTCTTC
TTGGTCTTGGCCTGCCATGGATCCTCAAGACATTGATTTTCGACCCCGAT
TCGATCATCGAAGTTCAGTCGGTCGGTCTCATCATTTCTTGTTTCGCAAT
CTTCATCAGTGTGTTGTTCGTTATTGGTTGCTTTTATTATTATGAATTTA
AACTGACCAAGAAAATTGGTTGGGCGTTCATTGTGGCGTACTTTGTGGTG
TTGTTGATATCTGTTCTCTTGGAATTGTTCTTATGGAATAATTATCATCT
TCCTACTTGTAAATATTTCTAGATGCTAAATAAACGACATAATGTTACAC
TCAGAAATCGCTTCCGTATCTGTTTGTATACATTCCTCTTCACATCCGCC
ATCTTGGTGTTCGCCGTCAATTCATGGTTCCAACAGAAAGATGACTTCCA
CGCTGCGGATGGAACAATATATAACTCGAGAAAATTACAAGAATACCGTC
CAGAATGGTTTCGATCCTCTGCAGACTTGTATCGTCGTCAACTGACCCAA
GATGCGAAAGCTCAAACACCAACACCCCCTTCGCAACAAACAAATCCTAC
TACTCAACCACCAACAGAATCACCAACCTTCTCTTCAACAGTCCCTTCAA
TATCAACATTCAGTTCGCAATACACTACCACACCATTCAACAAATCCACA
ACGAATAAAACTAGAAATGCAACCGTCGACGAGTGTGACATGCCAGCCAT
CGCAGAATTCCCAGGAGACCTTTTCACACAGAAACAACGAATACACGGAG
CTTTTTTAGTTCACGCTTTCATCGCAATCTACATGTGTATAGCATTAGCC
GTCATATGTGATTATTATTTTGTACCCTCACTGGAAGTGGTGTGTTATCG
ATTGGACTTGCAAGCTGATGTTGCTGGAGCTTCATTGATGGCAATTGGGT
CATCTGCTCCTGAACTTTTCGCCTCCGTTATCGGTGTTTTTGTGACGAAA
GGAGATATCGGGATAGGAACCATCCTAGGatccgccatctttaatgttCT
TCTGGTGATTGGGTTGTGTGGTGTGCTAACCGGTTTCAATTTGGAACTAG
CCTGGTGGCCATTGATGAGAGATGGGATGTGTTACGCGTTTAGTCTAGTC
ATACTGGCCATTGTGATTGTCGATGAACGAGTTGGATGgCTTGAAGCGGT
GATCATGTTGGTATTTTATTTGTTGTATTTGGTGTTAATGTGGAAGAATG
AGAAGTTGGAGAAGTGGTTTTATTTGTACGCAGGCTTGATGGAGACGTAT
GAAAAACGTTTCGGTGCGTTGGAAGAAGAAACGAAcgatgaagaagatga
agagGAGCACAAGTTGACggaaaaagaacgaaaaagacATGAGAAATATC
TAAAGATTGGCAAAGAAGGGGTCTATCACCCTCTTAGTCACACTGACTCC
GaAATGAGCAGTGAAGATTCTATTGACGCCGTTTATCCTGACGATGATCC
TTTCGTATTAACAGACATCCCCTCACGATGGACGGAGAAAATTGTGTGGG
CGTTCCTTCTCCCCATCCGTGCATTGTTCTACATCACCGTGCCCGATATC
CGATACAAAAGCATGAGGCGTTTTTTCTATCTGACTTTTTTCATGTCAAT
CGTTTGGATTGGTGTGACCACGTATATTTTGGTTTGGATGACAACCGTGG
TCGGTTTCACCTTCAGTATCCCCGATGCTGTGATGGGTTTGACTTTCATC
GCGTTTGGTAGTAGTGTCCCTGATGCCTTCGCAAGTATCATAGTTGCACA
GCAAGGCAAAGGAGACATGGCAGTTTCGCAAGCAATGGGGAGCAACGTGT
TTGATATTCTTCTTGGTCTTGGCCTGCCATGGATCCTCAAGACATTGATT
TTCGACCCCGATTCGATCATCGAAGTTCAGTCGGTCGGTCTCATCATTTC
TTGTTTCGCAATCTTCATCAGTGTGTTGTTCGTTATTGGTTGCTTTTATT
ATTATGAATTTAAACTGACCAAGAAAATTGGTTGGGCGTTCATTGTGGCG
TACTTTGTGGTGTTGTTGATATCTGTTCTCTTGGAATTGTTCTTATGGAA
TAATTATCATCTTCCTACTTGTAAATATTTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002765XLOC_002765Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004880-proteinTCONS_00004880-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004880-exon-sc0000049-1491911889:704287..704471TCONS_00004880-exon-sc0000049-1491911889:704287..704471Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1510915933:704287..704471TCONS_00004880-exon-sc0000049-1510915933:704287..704471Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1575043694:704287..704471TCONS_00004880-exon-sc0000049-1575043694:704287..704471Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1491911889:705316..705478TCONS_00004880-exon-sc0000049-1491911889:705316..705478Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1510915933:705316..705478TCONS_00004880-exon-sc0000049-1510915933:705316..705478Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1575043694:705316..705478TCONS_00004880-exon-sc0000049-1575043694:705316..705478Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1491911889:708736..709245TCONS_00004880-exon-sc0000049-1491911889:708736..709245Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1510915933:708736..709245TCONS_00004880-exon-sc0000049-1510915933:708736..709245Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1575043694:708736..709245TCONS_00004880-exon-sc0000049-1575043694:708736..709245Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1491911889:710336..710439TCONS_00004880-exon-sc0000049-1491911889:710336..710439Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1510915933:710336..710439TCONS_00004880-exon-sc0000049-1510915933:710336..710439Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1575043694:710336..710439TCONS_00004880-exon-sc0000049-1575043694:710336..710439Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1491911889:710620..710720TCONS_00004880-exon-sc0000049-1491911889:710620..710720Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1510915933:710620..710720TCONS_00004880-exon-sc0000049-1510915933:710620..710720Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1575043694:710620..710720TCONS_00004880-exon-sc0000049-1575043694:710620..710720Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1491911889:711058..711320TCONS_00004880-exon-sc0000049-1491911889:711058..711320Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1510915933:711058..711320TCONS_00004880-exon-sc0000049-1510915933:711058..711320Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1575043694:711058..711320TCONS_00004880-exon-sc0000049-1575043694:711058..711320Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1491911889:711613..711966TCONS_00004880-exon-sc0000049-1491911889:711613..711966Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1510915933:711613..711966TCONS_00004880-exon-sc0000049-1510915933:711613..711966Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1575043694:711613..711966TCONS_00004880-exon-sc0000049-1575043694:711613..711966Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1491911889:712786..713182TCONS_00004880-exon-sc0000049-1491911889:712786..713182Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1510915933:712786..713182TCONS_00004880-exon-sc0000049-1510915933:712786..713182Clytia hemisphaericaexon
TCONS_00004880-exon-sc0000049-1575043694:712786..713182TCONS_00004880-exon-sc0000049-1575043694:712786..713182Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:704287..713182 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.303878	0.240767	0.150529	0.126231	1.35745	1.3965	8.8392	11.1555	3.00885	2.02206	7.10023	4.78125	7.45242	7.87059	4.85302	11.666	6.34459	6.70759	2.70537	3.04224	3.01152	2.82139	2.46072	1.88079	3.81317	5.29583	0.416677	0.0555861	0.0632401	0.171818
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004836Na_Ca_Ex
IPR004481K/Na/Ca-exchanger
IPR004837NaCa_Exmemb
Vocabulary: Molecular Function
TermDefinition
GO:0005432calcium:sodium antiporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006816calcium ion transport
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006816 calcium ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0005432 calcium:sodium antiporter activity
Blast
[Close]
BLAST of TCONS_00004880 vs. Swiss-Prot (Human)
Match: NCKX5 (Sodium/potassium/calcium exchanger 5 OS=Homo sapiens GN=SLC24A5 PE=1 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 2.378e-86
Identity = 175/480 (36.46%), Postives = 264/480 (55.00%), Query Frame = 3 
Query:  555 TPFNKSTTNKTRNATVDECDMPAIAEFPGDLFTQKQRIHGAFLVHAFIAIYMCIALAVICDYYFVPSLEVVCYRLDLQADVAGASLMAIGSSAPELFASVIGVFVTKGDIGIGTILGSAIFNVLLVIGLCGVLTGFNLELAWWPLMRDGMCYAFSLVILAIVIVDERVGWLEAVIXXXXXXXXXXXXWKNEKLEKWFY--------LYAGLMETYEKRFGAXXXXXXXXXXXXXXXXXXXXXXXXXXYLKIGKEGVYHPL----SHTDSEMSSEDSIDAVYP---------DDDPFVLTDIPSRWTEKIVWAFLLPIRALFYITVPDIRYKSMRRFFYLTFFMSIVWIGVTTYILVWMTTVVGFTFSIPDAVMGLTFIAFGSSVPDAFASIIVAQQGKGDMAVSQAMGSNVFDILLGLGLPWILKTLIFDPDSIIEVQSVGLIISCFAIFISVLFVIGCFYYYEFKLTKKIGWAFIVAYF 1931
            T   +     T N+T  +C +   +EFP   FT+++R  G  +++  I +YM +A++++CD YF+PSLE++   L L  DVAG + MA GSSAPEL  + +GVF+TKGDIGI TILGSAI+N+L +   CG+L+     L+ WPL RD   Y  S   +  +I D +V W E  ++L+ Y LY++++  + K+ ++            A  ME  E++                                +G E    P     S TDS +  EDS  +             +DP  + ++P    ++I W   LPI  L ++T PD R K  + +F +TFFMS +WI   TYILVWM T+ G T  IPD VMGLT +A G+S+PD  AS++VA++GKGDMA+S  +GSNVFD+L  LG+PW +KT   +  +  EV S GL     ++ IS++F+    ++  +KL +K+G   +++Y 
Sbjct:   30 TSLPQRLPRATGNST--QCVISPSSEFPEGFFTRQERRDGGIIIYFLIIVYMFMAISIVCDEYFLPSLEIISESLGLSQDVAGTTFMAAGSSAPELVTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNTVSTLSCWPLFRDCAAYTISAAAVLGIIYDNQVYWYEGALLLLIYGLYVLVLCFDIKINQYIIKKCSPCCACLAKAMERSEQQ------------------------------PLMGWEDEGQPFIRRQSRTDSGIFYEDSGYSQLSISLHGLSQVSEDPPSVFNMPEADLKRIFWVLSLPIITLLFLTTPDCRKKFWKNYFVITFFMSAIWISAFTYILVWMVTITGETLEIPDTVMGLTLLAAGTSIPDTIASVLVARKGKGDMAMSNIVGSNVFDMLC-LGIPWFIKTAFINGSAPAEVNSRGLTYITISLNISIIFLFLAVHFNGWKLDRKLGIVCLLSYL 476
The following BLAST results are available for this feature:
BLAST of TCONS_00004880 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCKX52.378e-8636.46Sodium/potassium/calcium exchanger 5 OS=Homo sapie... [more]
back to top