TCONS_00004833 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004833
Unique NameTCONS_00004833
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1823

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004833 ID=TCONS_00004833|Name=TCONS_00004833|organism=Clytia hemisphaerica|type=transcript|length=1823bp
gattacagagaaaagaaaagtaaaataaagaaatattcggAATGGAAAAT
GAACAACCAGCAATCAACAACCATgtgaataatgatgaaatggACGAAAA
ATTACCAACAATTCCAATTCCACCTTCTGAGAAGTCCAATGGTCGTGTTT
TCTTGGAGAGTCTGTTGAACAAAACAGTGAAGATTGAAATTACAGATGGT
CGTACATTGATTGGTACATATTTGTGCACTGATCgagagaaaaacataat
tttaggATCTTGCCAAGAATTCATCGCTAATCCAGAGACTAGCTTAGAAG
AACCAAGGCTTCTTGGATTAGCAATGATCCCTGGAAGGCATGTTAAATCT
CTCCATGCTGACATTGACAATGAATTCCATTTAGCGTTAAAAGATATCTT
GAAACCTTCTGTTAAAGATTGAATCGATTGATGCAAGGAGGTTGATGGCT
AATCGATGGTCTAGTATAAAGCTCACCTTTGATTAAAATTTGAGGTGGAT
CTACAATTGGGTTCTTAACATTTGGAGGAGTTATGTTAAAGATACCTAAT
GTACAAATGAAATACTAAAAATTGATACAAAATCATTTGAATCGAATAGC
TTATTGGAATGAAGATGTATTCAAACAAAGATGATGGTAAACCTTTGGTC
CATTGATGATTGTTTTTGGATAATTCACGCAAATTATGGGgaagaaactt
tcaaaacacagACTTGGCACAAACCAATTTACAACATTTGAATCAAGTCA
AAGCAATGCTGTCAGTGGTGCTGGTGGTGCTAGTTCTGGTGCTGGAAAAC
CTCCCAGTAGCTCTGGTTTGGCTTCACAAGGAGAAGTGATCATCAACAGG
GAATCCATTAGATCTCTGGCATTAATGAATGGATTGTTGTACATTGGAGA
TACAGAGGgtattgtgaatgttttcgaTTTGGAGCAGAAGCAGCAAAAAG
AGACGCTGAAAGTGCACACAAAAGCTGTCACAAGGATAGTCGATGGGCCT
GGTGATTCGTACTTTACTGCTTCTCGCGACAAATCTGTCTCAAAGAGAAT
GCTGGGTAGCACAGATGGGGCGAAAATGGAAGGTCATAGATTAGCAGTCA
CTGCCCTGGCTATGAAACCTGATTTGGCGAAAGTTATGTCAGGGAGTCGT
GATGGAAATGTAATTATTTGGGACACAAATACCTGCCTATTGGAACAACA
AGAAGAAATTGCTAGAAATATAgTTACAGATATCGTTTGGTTTGATTCGT
CGCAAGCAATCCAGTGTGGAGAAGACAAAACTGTAAAGTTATGGGATTGC
AGAAGATTACATGTTCTTGACACACTTCCCATGAAGCAATACTTTCAGTC
ATGTTGCGCAGTGAATGATACTCAATTGGTGACTGGAAGTGTTGGTGGCA
ATGGTAGAGGTTGTCACGTCACTCTCTGGGATTTACGAGAACGTAGAGAA
ATAGTCACCTTAAATGGGCATGAGCAAAGTTTATCATCTGTTGCTTATTT
CACCAATCGAAACAATCAACTGAGGATAATTTCAATTGCTGACGATTGTT
ATGTCAAAGTTTGGGATCCAGCGAGACAAGAGTGCGCATGCTCACTTTAT
GTACCTGGAGCACAAGGATTGACTGCAATGATTCAATTATCTGAGGACAG
CTTTATAATTGGTTCAATTCAAGGTGCTTTATATGAAGTGAGATACAAAT
GTGACCCAACTGAGCAAATAGAAATAACTAGCACAATGTAATGATGATGC
AACATGGATATCACTAACTGAATCCAGGTGACATTTTCCTTTTTATGACT
Tctgtacccagctggcacacaac
Run BLAST on NCBI

protein sequence of TCONS_00004833-protein

>TCONS_00004833-protein ID=TCONS_00004833-protein|Name=TCONS_00004833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
MGKKLSKHRLGTNQFTTFESSQSNAVSGAGGASSGAGKPPSSSGLASQGE
VIINRESIRSLALMNGLLYIGDTEGIVNVFDLEQKQQKETLKVHTKAVTR
IVDGPGDSYFTASRDKSVSKRMLGSTDGAKMEGHRLAVTALAMKPDLAKV
MSGSRDGNVIIWDTNTCLLEQQEEIARNIVTDIVWFDSSQAIQCGEDKTV
KLWDCRRLHVLDTLPMKQYFQSCCAVNDTQLVTGSVGGNGRGCHVTLWDL
RERREIVTLNGHEQSLSSVAYFTNRNNQLRIISIADDCYVKVWDPARQEC
ACSLYVPGAQGLTAMIQLSEDSFIIGSIQGALYEVRYKCDPTEQIEITST
M
Run BLAST on NCBI

transcript from alignment at sc0000049:15640..22149+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004833 ID=TCONS_00004833|Name=TCONS_00004833|organism=Clytia hemisphaerica|type=transcript|length=6510bp|location=Sequence derived from alignment at sc0000049:15640..22149+ (Clytia hemisphaerica)
gattacagagaaaagaaaagtaaaataaagaaatattcggAATGGAAAAT
GAACAACCAGCAATCAACAACCATgtgaataatgatgaaatggACGTAAG
GATTGTATTTCATACagcaataataataataaagaaatAAGACAATCCAA
GGTtccatttttttacttgaatgtTTGGGATGTTttgttgaattattttt
atcaagaAAATAAAACATATAAAATGTTGACTTCTAGGTTTGAATCCAAA
GTTCCATCAAATAGAAGGTTTGGATTGCTTTGAATAACTTAATTAACAAA
ATAAGACATAGTGTTGACCTCATTACTTTGTTCTAATTCAGGAAAAATTA
CCAACAATTCCAATTCCACCTTCTGAGAAGTCCAATGGTCGTGTTTTCTT
GGAGAGTCTGTTGAACAAAACAGTGAAGATTGAAATTACAGATGGTCGTA
CATTGATTGGTACATATTTGTGCACTGATCgagagaaaaacataatttta
ggATCTTGCCAAGAATTCATCGCTAATCCAGGTTTCTTGCATTACgtttt
tttatgtttgttgATTTAACCCTACTATTTTAAGCCCCTTTACCTGATTA
ATCTGCCTCGTCTATCAAAACAACTGAGACGTTTTCAATCTGCTACAATA
TTTACGAAAAATTATGCAATTTTTTACCGACATAGAGAGAAATTTGAAGG
TGTTAGCAAAATTATCAGGTGCAGTAGAACCTGTTCTGCCTGGTATGTTG
TGTCTGCTAGAAGATAGTAGAAGGGAGAAGTGCTCAAAGAGTTTTGAAGC
ACATGGAAAAATTTAATCACTTTAATTTTTGCAAGTTTTATAAACATCAA
TATAATAACATCCTTTCATTTTCAGAGACTAGCTTAGAAGAACCAAGGCT
TCTTGGATTAGCAATGATCCCTGGAAGGCATGTTAAATCTCTCCATGCTG
ACATTGACAATGAATTCCATTTAGCGTTAAAAGATATCTTGAAACCTTCT
GTTAAAGATTGAATCGATTGATGCAAGGAGGTTGATGGCTAATCGATGGT
CTAGTATAAAGCTCACCTTTGATTAAAATTTGAGGTGGATCTACAATTGG
GTTCTTAACATTTGGAGGAGTTATGTTAAAGATACCTAAGTATGTCACAA
CATAGATGAAATGTTTCATTCAACAATTTCTTGGAATGCTGTTTAAATTC
CTTCCATAAACTGAAATTCTtgatcaaaatcttttttttaaattgtaaaa
GAAATAACAAATGTTAATAAGACTGACATATTTTGTGTCAATTCATTTTC
TGGCAATTATTCTTTTTTATCCtacctcattttttttcaacaagaggtta
agtaagtaagtctgcgaccgcagtcggaggcgaccggAAGGGTCCTCTTT
TGATAgttatctacccgaaggtaggggagggcgccactctttctccctgg
atttcatttacccttgatccttctcttaatttctgagcatcaagcagaga
ggtatcaagtaccattttgagaatatttggtttgacccggctggggggtt
gaacccacaaccttgcaaaccgtagccggatgctccaCCACTGCACCACG
GCTCGCTTTCTCTACTTAAACCTTCTAATGATTCTGTTTCACTTCAGTGT
ACAAATGAAATACTAAAAATTGATACAAAATCATTTGAATCGAATAGCTT
ATTGGAATGAAGATGTATTCAAACAAAGATGATGGTAAACCTTTGGTCCA
TTGATGATTGTTTTTGGATAATTCACGCAAATTATGGGgaagaaactttc
aaaacacagACTTGGCACAAACCAATTTACAACATTTGAATCAAGTCAAA
GCAATGCTGTCAGTGGTGCTGGTGGTGCTAGTTCTGGTGCTGGAAAACCT
CCCAGTAGCTCTGGTTTGGCTTCACAAGGAGAAGTGATCATCAACAGGGA
ATCCATTAGATCTCTGGCATTAATGAATGGATTGTTGTACATTGGAGATA
CAGAGGgtgtaagaacaatttttttcccTTAATAATATTGTTGAGGCTTT
AGTTATACTCTACATTTTTTAGGTTTATTCCTATCAGCTCACAATAAGTA
TAACCTCCTTCTTATTtccagattgtgaatgttttcgaTTTGGAGCAGAA
GCAGCAAAAAGAGACGCTGAAAGTGCACACAAAAGCTGTCACAAGGGTAA
GACATTGAGGGATATCTACTAAAAGAGACATTATGTTATAACCAAATATG
CAAATGGTGTTGGCATGAAACAATCAGACTTCAATTGTTTgacattgggc
cattccattttatatccatgcagggggtggacgaacatttccaaggggtg
atttttcatttttccagtagGTAAAAGGTTATTCTAAAATCTCCAGGGGG
AAACAGACTCATTTTTGTTTGTCCACCCTTACTTTTGaggtatgaaaata
atttttccaagaacCCAGATGAGTTTGGCCGTAGAACGTTCGAATTGTTG
ATTGGTGTATTGAGAATATGATGTTTTAATAAATCATTTTGTTTCCACCT
CAGATAGTCGATGGGCCTGGTGATTCGTACTTTACTGCTTCTCGCGACAA
ATCTGTCTCAAAGAGAATGCTGGGTAGCACAGATGGGGCGAAAATGGAAG
GTCATAGATTAGCAGTCACTGCCCTGGCTATGAAACCTGGTAAAATTCAA
CATTTGAAAATCTAAATGTCAAAGAAATTGAATAATCATAATTCTAATTA
AATTCTTCCCCTGGAATATTCTTACACTGGAAACATAGTTTGCCCAAACC
TGCCCAAACTGAAAAAGTACaagataaagtttttttttctcaaggaAAGT
TTCTCTATCAGAGCAATTCTTGCCGTATTTTCAATCACAATTATGCTTGT
CAATTTAAggcgaaatttgattttttcagtgttttttttattggtTTTAG
ATTTGGCGAAAGTTATGTCAGGGAGTCGTGATGGAAATGTAATTATTTGG
GACACAAATACCTGCCTATTGGAACAACAAGAAGAAATTGCTAGAAATAT
AGTATGTGCCGATCTACCTAGATATTTGTGTTATTTTTGAGGCCGAATTG
ACTGATTCCCTGTCCAATATCCTGGCCATTATCCCGGCCATTTTCTTTCC
TAGATTTAGAGAGGGGCAGGCGTCATGGATTTCAAACAACCCAAACTCTC
AATATTGCAATTTCAGTCATATGGTGAGCTGAGTTCGTTGGTAAGCAAGG
GATATTATGAAATCTATGCTGAAcaatgaaaaagattttcaatacattaa
aacaattttttgatacattaaaaaaataacaaattttaggTTACAGATAT
CGTTTGGTTTGATTCGTCGCAAGCAATCCAGTGTGGAGAAGACAAAACTG
TAAAGTATGTTAttgtttttcaacaaattttgtattaaaaagaaatttaa
aataNGTTTGGTTTGATTCGTCGCAAGCAATCCAGTGTGGAGAAGACAAA
ACTGTAAAGTATGTTAttgtttttcaacaaattttgtattaaaaagaaat
tgaaaatagcAAAATGTCCCCTTATTTTTGACAGTAATTACCGTTGAGCG
CTTTCTATTCAGATGTGTAACTTAATTATAATAATGATGGATACTAAAAT
GCACTTTACTCTGCGAAATCAGGAAGTATTTATACTTTTACTACAGAGAT
TTTTTTATGCTTCGCTAAGTTTCGTAACTACcgcgccattatggaagcaa
acgatCGATTTGCGTATGAAATCGCCTCTAAAAATCTGAATcattgcttc
cataatggtggaagttACGTAGCTCAACAAGAAATTAAAAACGTCTAGGA
AGACTTCCCGATTTCACAAAGTTAAACTTCTATAGTGTGAAATAATCCCA
GTTTATGAAACAAATCTTTACATACAAGCATTTGGTCTTTCATTATCATT
TAGGTTATGGGATTGCAGAAGATTACATGTTCTTGACACACTTCCCATGA
AGCAATACTTTCAGGTCACTTTTGAATCTTGTCAAACTAGTATATACTTG
TTTGTTAGGTGTggctttaaagaatttttttttacataaggGTATCATTA
TATAAAGATCTTTACGGTCTTCGAATGGACTTCTCTCGCTGTTAAATTTT
GActagatatttcaaaattttaagtcaaaagtgttagattattaaaaata
aaaaggtaaCCTTGTCCCTGTTAATAAGCTAATGAAATGCTCTTTACTTT
CTAGTCATGTTGCGCAGTGAATGATACTCAATTGGTGACTGGAAGTGTTG
GTGGCAATGGTAGAGGTTGTCACGTCACTGTGAGTTAGTTCTAATTTAAA
CATTCCATGCACTCTTAACTACGCTTGACTTGATCGGGCTTCCCATATCA
TAGGAAGTGTATTTAGTAATAAAGCTGACTATTTCCCTCATGTTATTCTG
TTTGTCAACAGTGGAAGTGgaagttttgaaattaaaacattcgaaagttt
gACTTGACACGGCGGACTAGTCGACTTTATCTGTAGACATTTTtatgcaa
aaatttaatttgtcgTCTTTCTACCGACTTTTCCCGCTATTGTAAGAATG
CTCGGCAAAGTATTTGTGATTCGTTCtaacgatttttttttttcaatggc
GTTCAATATAGAGATGCACAATTTCTTTAAACACCTAATCAATTTCACgt
tagctgattggttgcaagtggcATTTTGATTAGAGAAAAAAAGAGCCAAA
AATGTATTCGGCTTCAAATTTCGTACAAATCGTTCTTCCGCCTAAACTTA
AAagtagaaatgaaaataaaaaagaataaataagGTTTTGTTAAGGCATT
GCAGTGACACACATTTCATGaactttttttgtgttttttatgCTACTTGC
TTCACTTTTAGCTCTGGGATTTACGAGAACGTAGAGAAATAGTCACCTTA
AATGGGCATGAGCAAAGTTTATCATCTGTTGCTTATTTCACCAATCGAAA
CAATCAACTGAGGTACTGTATGAGAAGTTCTAGCCCAACAAtaacaatta
tttttcaacatgTTATACTTTATATCTCTGcaaccaatttttatttttat
tttagtacttCTGTTTGCTCAGTACATACCTAGTAATTTTCATATGTTGG
TCACCTTGAAGGAGTTGGTAAAACTTTGTATACAACCCTTACTTTTCAGG
ATAATTTCAATTGCTGACGATTGTTATGTCAAAGTTTGGGATCCAGCGAG
ACAAGGTTTTCTTTCTTCCCTTGAATATAATTGAGaaattatttttggac
ctaccccggtggggtggaggtcctataaattaacctctctTTGTTCGCCC
GTCCGTTcgcgtccgtccgttcgtttgtctgttaccaacttttctgaGGA
TTGAATCATatgaatcttttgatttttggtacaaaggtgcaaaatggtgg
tggccaaaatgtgacggagcctgatttcagcaaatttcagccaaaaaaca
gctaaaaaaaggttttttaagacattgtgaaaaattggatcattattttt
tctgatttttttgcatgaaagtaagctaacatcattggtaaaagatggct
gaagcagattttcacaaaaaaaagttttctgagtaattttgtccattttc
ctaagaaattgggtgttttagagtctgtaaagccttaaaatgttcttaac
attttggccatccaagccttatgctcttatacagtttgctcttataaaaa
acgtgtaagcctTTTACTAGCTTCGACCATATGACAATTTCAAAGATGAA
ATTTGAACCGAAAATTGATTTGTCACGAGTCTTTGTAAAATTTGGGTccc
agtttcattgaaaaaaataccaacTTGCTTCACAACAAAATCATCTTCAG
AGCGAAAGtgatataaattttaaaattttcagaaaaatcaaaaatcaact
atccttccacttttttaatctttttatttaaatatctCATCTTTAGAGTG
CGCATGCTCACTTTATGTACCTGGAGCACAAGGATTGACTGCAATGATTC
AATTATCTGAGGACAGGTTTGTCATGCTTCGATTTTTGGAAAGAGTGCAT
CCTACCCCCTCTCCCTCCCCCACGTCTACAGTATGTCCAGAAAAAGTGGA
CATAGATacataaataaaattttcataccGGTTGTCAAAGCAAAGAGCCC
CCTCTCTGCAATTTTCTCTGGAATATTTAGAAttcacactttttttaata
gaaaaataatctttaatttTATTTGTATAGTCAAGTTTGTGTTATTTTTA
CTGCCGTAAATTACTGCTATGGATTTCTTTTTTCCAGCTTTATAATTGGT
TCAATTCAAGGTGCTTTATATGAAGTGAGATACAAATGTGACCCAACTGA
GCAAATAGAAATAACTAGCACAATGTAATGATGATGCAACATGGATATCA
CTAACTGAATCCAGGTGACATTTTCCTTTTTATGACTTctgtacccagct
ggcacacaac

Coding sequence (CDS) from alignment at sc0000049:15640..22149+

>TCONS_00004833 ID=TCONS_00004833|Name=TCONS_00004833|organism=Clytia hemisphaerica|type=CDS|length=11616bp|location=Sequence derived from alignment at sc0000049:15640..22149+ (Clytia hemisphaerica)
ATGGGgaagaaactttcaaaacacagACTTGGCACAAACCAATTTACAAC
ATTTGAATCAAGTCAAAGCAATGCTGTCAGTGGTGCTGGTGGTGCTAGTT
CTGGTGCTGGAAAACCTCCCAGTAGCTCTGGTTTGGCTTCACAAGGAGAA
GTGATCATCAACAGGGAATCCATTAGATCTCTGGCATTAATGAATGGATT
GTTGTACATTGGAGATACAGAGGgtattgtgaatgttttcgaTTTGGAGC
AGAAGCAGCAAAAAGAGACGCTGAAAGTGCACACAAAAGCTGTCACAAGG
ATAGTCGATGGGCCTGGTGATTCGTACTTTACTGCTTCTCGCGACAAATC
TGTCTCAAAGAGAATGCTGGGTAGCACAGATGGGGCGAAAATGGAAGGTC
ATAGATTAGCAGTCACTGCCCTGGCTATGAAACCTGATTTGGCGAAAGTT
ATGTCAGGGAGTCGTGATGGAAATGTAATTATTTGGGACACAAATACCTG
CCTATTGGAACAACAAGAAGAAATTGCTAGAAATATAgTTACAGATATCG
TTTGGTTTGATTCGTCGCAAGCAATCCAGTGTGGAGAAGACAAAACTGTA
AAGTTATGGGATTGCAGAAGATTACATGTTCTTGACACACTTCCCATGAA
GCAATACTTTCAGTCATGTTGCGCAGTGAATGATACTCAATTGGTGACTG
GAAGTGTTGGTGGCAATGGTAGAGGTTGTCACGTCACTCTCTGGGATTTA
CGAGAACGTAGAGAAATAGTCACCTTAAATGGGCATGAGCAAAGTTTATC
ATCTGTTGCTTATTTCACCAATCGAAACAATCAACTGAGGATAATTTCAA
TTGCTGACGATTGTTATGTCAAAGTTTGGGATCCAGCGAGACAAGAGTGC
GCATGCTCACTTTATGTACCTGGAGCACAAGGATTGACTGCAATGATTCA
ATTATCTGAGGACAGCTTTATAATTGGTTCAATTCAAGGTGCTTTATATG
AAGTGAGATACAAATGTGACCCAACTGAGCAAATAGAAATAACTAGCACA
ATGTAAATGGGgaagaaactttcaaaacacagACTTGGCACAAACCAATT
TACAACATTTGAATCAAGTCAAAGCAATGCTGTCAGTGGTGCTGGTGGTG
CTAGTTCTGGTGCTGGAAAACCTCCCAGTAGCTCTGGTTTGGCTTCACAA
GGAGAAGTGATCATCAACAGGGAATCCATTAGATCTCTGGCATTAATGAA
TGGATTGTTGTACATTGGAGATACAGAGGgtattgtgaatgttttcgaTT
TGGAGCAGAAGCAGCAAAAAGAGACGCTGAAAGTGCACACAAAAGCTGTC
ACAAGGATAGTCGATGGGCCTGGTGATTCGTACTTTACTGCTTCTCGCGA
CAAATCTGTCTCAAAGAGAATGCTGGGTAGCACAGATGGGGCGAAAATGG
AAGGTCATAGATTAGCAGTCACTGCCCTGGCTATGAAACCTGATTTGGCG
AAAGTTATGTCAGGGAGTCGTGATGGAAATGTAATTATTTGGGACACAAA
TACCTGCCTATTGGAACAACAAGAAGAAATTGCTAGAAATATAgTTACAG
ATATCGTTTGGTTTGATTCGTCGCAAGCAATCCAGTGTGGAGAAGACAAA
ACTGTAAAGTTATGGGATTGCAGAAGATTACATGTTCTTGACACACTTCC
CATGAAGCAATACTTTCAGTCATGTTGCGCAGTGAATGATACTCAATTGG
TGACTGGAAGTGTTGGTGGCAATGGTAGAGGTTGTCACGTCACTCTCTGG
GATTTACGAGAACGTAGAGAAATAGTCACCTTAAATGGGCATGAGCAAAG
TTTATCATCTGTTGCTTATTTCACCAATCGAAACAATCAACTGAGGATAA
TTTCAATTGCTGACGATTGTTATGTCAAAGTTTGGGATCCAGCGAGACAA
GAGTGCGCATGCTCACTTTATGTACCTGGAGCACAAGGATTGACTGCAAT
GATTCAATTATCTGAGGACAGCTTTATAATTGGTTCAATTCAAGGTGCTT
TATATGAAGTGAGATACAAATGTGACCCAACTGAGCAAATAGAAATAACT
AGCACAATGTAAATGGGgaagaaactttcaaaacacagACTTGGCACAAA
CCAATTTACAACATTTGAATCAAGTCAAAGCAATGCTGTCAGTGGTGCTG
GTGGTGCTAGTTCTGGTGCTGGAAAACCTCCCAGTAGCTCTGGTTTGGCT
TCACAAGGAGAAGTGATCATCAACAGGGAATCCATTAGATCTCTGGCATT
AATGAATGGATTGTTGTACATTGGAGATACAGAGGgtattgtgaatgttt
tcgaTTTGGAGCAGAAGCAGCAAAAAGAGACGCTGAAAGTGCACACAAAA
GCTGTCACAAGGATAGTCGATGGGCCTGGTGATTCGTACTTTACTGCTTC
TCGCGACAAATCTGTCTCAAAGAGAATGCTGGGTAGCACAGATGGGGCGA
AAATGGAAGGTCATAGATTAGCAGTCACTGCCCTGGCTATGAAACCTGAT
TTGGCGAAAGTTATGTCAGGGAGTCGTGATGGAAATGTAATTATTTGGGA
CACAAATACCTGCCTATTGGAACAACAAGAAGAAATTGCTAGAAATATAg
TTACAGATATCGTTTGGTTTGATTCGTCGCAAGCAATCCAGTGTGGAGAA
GACAAAACTGTAAAGTTATGGGATTGCAGAAGATTACATGTTCTTGACAC
ACTTCCCATGAAGCAATACTTTCAGTCATGTTGCGCAGTGAATGATACTC
AATTGGTGACTGGAAGTGTTGGTGGCAATGGTAGAGGTTGTCACGTCACT
CTCTGGGATTTACGAGAACGTAGAGAAATAGTCACCTTAAATGGGCATGA
GCAAAGTTTATCATCTGTTGCTTATTTCACCAATCGAAACAATCAACTGA
GGATAATTTCAATTGCTGACGATTGTTATGTCAAAGTTTGGGATCCAGCG
AGACAAGAGTGCGCATGCTCACTTTATGTACCTGGAGCACAAGGATTGAC
TGCAATGATTCAATTATCTGAGGACAGCTTTATAATTGGTTCAATTCAAG
GTGCTTTATATGAAGTGAGATACAAATGTGACCCAACTGAGCAAATAGAA
ATAACTAGCACAATGTAAATGGGgaagaaactttcaaaacacagACTTGG
CACAAACCAATTTACAACATTTGAATCAAGTCAAAGCAATGCTGTCAGTG
GTGCTGGTGGTGCTAGTTCTGGTGCTGGAAAACCTCCCAGTAGCTCTGGT
TTGGCTTCACAAGGAGAAGTGATCATCAACAGGGAATCCATTAGATCTCT
GGCATTAATGAATGGATTGTTGTACATTGGAGATACAGAGGgtattgtga
atgttttcgaTTTGGAGCAGAAGCAGCAAAAAGAGACGCTGAAAGTGCAC
ACAAAAGCTGTCACAAGGATAGTCGATGGGCCTGGTGATTCGTACTTTAC
TGCTTCTCGCGACAAATCTGTCTCAAAGAGAATGCTGGGTAGCACAGATG
GGGCGAAAATGGAAGGTCATAGATTAGCAGTCACTGCCCTGGCTATGAAA
CCTGATTTGGCGAAAGTTATGTCAGGGAGTCGTGATGGAAATGTAATTAT
TTGGGACACAAATACCTGCCTATTGGAACAACAAGAAGAAATTGCTAGAA
ATATAgTTACAGATATCGTTTGGTTTGATTCGTCGCAAGCAATCCAGTGT
GGAGAAGACAAAACTGTAAAGTTATGGGATTGCAGAAGATTACATGTTCT
TGACACACTTCCCATGAAGCAATACTTTCAGTCATGTTGCGCAGTGAATG
ATACTCAATTGGTGACTGGAAGTGTTGGTGGCAATGGTAGAGGTTGTCAC
GTCACTCTCTGGGATTTACGAGAACGTAGAGAAATAGTCACCTTAAATGG
GCATGAGCAAAGTTTATCATCTGTTGCTTATTTCACCAATCGAAACAATC
AACTGAGGATAATTTCAATTGCTGACGATTGTTATGTCAAAGTTTGGGAT
CCAGCGAGACAAGAGTGCGCATGCTCACTTTATGTACCTGGAGCACAAGG
ATTGACTGCAATGATTCAATTATCTGAGGACAGCTTTATAATTGGTTCAA
TTCAAGGTGCTTTATATGAAGTGAGATACAAATGTGACCCAACTGAGCAA
ATAGAAATAACTAGCACAATGTAAATGGGgaagaaactttcaaaacacag
ACTTGGCACAAACCAATTTACAACATTTGAATCAAGTCAAAGCAATGCTG
TCAGTGGTGCTGGTGGTGCTAGTTCTGGTGCTGGAAAACCTCCCAGTAGC
TCTGGTTTGGCTTCACAAGGAGAAGTGATCATCAACAGGGAATCCATTAG
ATCTCTGGCATTAATGAATGGATTGTTGTACATTGGAGATACAGAGGgta
ttgtgaatgttttcgaTTTGGAGCAGAAGCAGCAAAAAGAGACGCTGAAA
GTGCACACAAAAGCTGTCACAAGGATAGTCGATGGGCCTGGTGATTCGTA
CTTTACTGCTTCTCGCGACAAATCTGTCTCAAAGAGAATGCTGGGTAGCA
CAGATGGGGCGAAAATGGAAGGTCATAGATTAGCAGTCACTGCCCTGGCT
ATGAAACCTGATTTGGCGAAAGTTATGTCAGGGAGTCGTGATGGAAATGT
AATTATTTGGGACACAAATACCTGCCTATTGGAACAACAAGAAGAAATTG
CTAGAAATATAgTTACAGATATCGTTTGGTTTGATTCGTCGCAAGCAATC
CAGTGTGGAGAAGACAAAACTGTAAAGTTATGGGATTGCAGAAGATTACA
TGTTCTTGACACACTTCCCATGAAGCAATACTTTCAGTCATGTTGCGCAG
TGAATGATACTCAATTGGTGACTGGAAGTGTTGGTGGCAATGGTAGAGGT
TGTCACGTCACTCTCTGGGATTTACGAGAACGTAGAGAAATAGTCACCTT
AAATGGGCATGAGCAAAGTTTATCATCTGTTGCTTATTTCACCAATCGAA
ACAATCAACTGAGGATAATTTCAATTGCTGACGATTGTTATGTCAAAGTT
TGGGATCCAGCGAGACAAGAGTGCGCATGCTCACTTTATGTACCTGGAGC
ACAAGGATTGACTGCAATGATTCAATTATCTGAGGACAGCTTTATAATTG
GTTCAATTCAAGGTGCTTTATATGAAGTGAGATACAAATGTGACCCAACT
GAGCAAATAGAAATAACTAGCACAATGTAAATGGGgaagaaactttcaaa
acacagACTTGGCACAAACCAATTTACAACATTTGAATCAAGTCAAAGCA
ATGCTGTCAGTGGTGCTGGTGGTGCTAGTTCTGGTGCTGGAAAACCTCCC
AGTAGCTCTGGTTTGGCTTCACAAGGAGAAGTGATCATCAACAGGGAATC
CATTAGATCTCTGGCATTAATGAATGGATTGTTGTACATTGGAGATACAG
AGGgtattgtgaatgttttcgaTTTGGAGCAGAAGCAGCAAAAAGAGACG
CTGAAAGTGCACACAAAAGCTGTCACAAGGATAGTCGATGGGCCTGGTGA
TTCGTACTTTACTGCTTCTCGCGACAAATCTGTCTCAAAGAGAATGCTGG
GTAGCACAGATGGGGCGAAAATGGAAGGTCATAGATTAGCAGTCACTGCC
CTGGCTATGAAACCTGATTTGGCGAAAGTTATGTCAGGGAGTCGTGATGG
AAATGTAATTATTTGGGACACAAATACCTGCCTATTGGAACAACAAGAAG
AAATTGCTAGAAATATAgTTACAGATATCGTTTGGTTTGATTCGTCGCAA
GCAATCCAGTGTGGAGAAGACAAAACTGTAAAGTTATGGGATTGCAGAAG
ATTACATGTTCTTGACACACTTCCCATGAAGCAATACTTTCAGTCATGTT
GCGCAGTGAATGATACTCAATTGGTGACTGGAAGTGTTGGTGGCAATGGT
AGAGGTTGTCACGTCACTCTCTGGGATTTACGAGAACGTAGAGAAATAGT
CACCTTAAATGGGCATGAGCAAAGTTTATCATCTGTTGCTTATTTCACCA
ATCGAAACAATCAACTGAGGATAATTTCAATTGCTGACGATTGTTATGTC
AAAGTTTGGGATCCAGCGAGACAAGAGTGCGCATGCTCACTTTATGTACC
TGGAGCACAAGGATTGACTGCAATGATTCAATTATCTGAGGACAGCTTTA
TAATTGGTTCAATTCAAGGTGCTTTATATGAAGTGAGATACAAATGTGAC
CCAACTGAGCAAATAGAAATAACTAGCACAATGTAAATGGGgaagaaact
ttcaaaacacagACTTGGCACAAACCAATTTACAACATTTGAATCAAGTC
AAAGCAATGCTGTCAGTGGTGCTGGTGGTGCTAGTTCTGGTGCTGGAAAA
CCTCCCAGTAGCTCTGGTTTGGCTTCACAAGGAGAAGTGATCATCAACAG
GGAATCCATTAGATCTCTGGCATTAATGAATGGATTGTTGTACATTGGAG
ATACAGAGGgtattgtgaatgttttcgaTTTGGAGCAGAAGCAGCAAAAA
GAGACGCTGAAAGTGCACACAAAAGCTGTCACAAGGATAGTCGATGGGCC
TGGTGATTCGTACTTTACTGCTTCTCGCGACAAATCTGTCTCAAAGAGAA
TGCTGGGTAGCACAGATGGGGCGAAAATGGAAGGTCATAGATTAGCAGTC
ACTGCCCTGGCTATGAAACCTGATTTGGCGAAAGTTATGTCAGGGAGTCG
TGATGGAAATGTAATTATTTGGGACACAAATACCTGCCTATTGGAACAAC
AAGAAGAAATTGCTAGAAATATAgTTACAGATATCGTTTGGTTTGATTCG
TCGCAAGCAATCCAGTGTGGAGAAGACAAAACTGTAAAGTTATGGGATTG
CAGAAGATTACATGTTCTTGACACACTTCCCATGAAGCAATACTTTCAGT
CATGTTGCGCAGTGAATGATACTCAATTGGTGACTGGAAGTGTTGGTGGC
AATGGTAGAGGTTGTCACGTCACTCTCTGGGATTTACGAGAACGTAGAGA
AATAGTCACCTTAAATGGGCATGAGCAAAGTTTATCATCTGTTGCTTATT
TCACCAATCGAAACAATCAACTGAGGATAATTTCAATTGCTGACGATTGT
TATGTCAAAGTTTGGGATCCAGCGAGACAAGAGTGCGCATGCTCACTTTA
TGTACCTGGAGCACAAGGATTGACTGCAATGATTCAATTATCTGAGGACA
GCTTTATAATTGGTTCAATTCAAGGTGCTTTATATGAAGTGAGATACAAA
TGTGACCCAACTGAGCAAATAGAAATAACTAGCACAATGTAAATGGGgaa
gaaactttcaaaacacagACTTGGCACAAACCAATTTACAACATTTGAAT
CAAGTCAAAGCAATGCTGTCAGTGGTGCTGGTGGTGCTAGTTCTGGTGCT
GGAAAACCTCCCAGTAGCTCTGGTTTGGCTTCACAAGGAGAAGTGATCAT
CAACAGGGAATCCATTAGATCTCTGGCATTAATGAATGGATTGTTGTACA
TTGGAGATACAGAGGgtattgtgaatgttttcgaTTTGGAGCAGAAGCAG
CAAAAAGAGACGCTGAAAGTGCACACAAAAGCTGTCACAAGGATAGTCGA
TGGGCCTGGTGATTCGTACTTTACTGCTTCTCGCGACAAATCTGTCTCAA
AGAGAATGCTGGGTAGCACAGATGGGGCGAAAATGGAAGGTCATAGATTA
GCAGTCACTGCCCTGGCTATGAAACCTGATTTGGCGAAAGTTATGTCAGG
GAGTCGTGATGGAAATGTAATTATTTGGGACACAAATACCTGCCTATTGG
AACAACAAGAAGAAATTGCTAGAAATATAgTTACAGATATCGTTTGGTTT
GATTCGTCGCAAGCAATCCAGTGTGGAGAAGACAAAACTGTAAAGTTATG
GGATTGCAGAAGATTACATGTTCTTGACACACTTCCCATGAAGCAATACT
TTCAGTCATGTTGCGCAGTGAATGATACTCAATTGGTGACTGGAAGTGTT
GGTGGCAATGGTAGAGGTTGTCACGTCACTCTCTGGGATTTACGAGAACG
TAGAGAAATAGTCACCTTAAATGGGCATGAGCAAAGTTTATCATCTGTTG
CTTATTTCACCAATCGAAACAATCAACTGAGGATAATTTCAATTGCTGAC
GATTGTTATGTCAAAGTTTGGGATCCAGCGAGACAAGAGTGCGCATGCTC
ACTTTATGTACCTGGAGCACAAGGATTGACTGCAATGATTCAATTATCTG
AGGACAGCTTTATAATTGGTTCAATTCAAGGTGCTTTATATGAAGTGAGA
TACAAATGTGACCCAACTGAGCAAATAGAAATAACTAGCACAATGTAAAT
GGGgaagaaactttcaaaacacagACTTGGCACAAACCAATTTACAACAT
TTGAATCAAGTCAAAGCAATGCTGTCAGTGGTGCTGGTGGTGCTAGTTCT
GGTGCTGGAAAACCTCCCAGTAGCTCTGGTTTGGCTTCACAAGGAGAAGT
GATCATCAACAGGGAATCCATTAGATCTCTGGCATTAATGAATGGATTGT
TGTACATTGGAGATACAGAGGgtattgtgaatgttttcgaTTTGGAGCAG
AAGCAGCAAAAAGAGACGCTGAAAGTGCACACAAAAGCTGTCACAAGGAT
AGTCGATGGGCCTGGTGATTCGTACTTTACTGCTTCTCGCGACAAATCTG
TCTCAAAGAGAATGCTGGGTAGCACAGATGGGGCGAAAATGGAAGGTCAT
AGATTAGCAGTCACTGCCCTGGCTATGAAACCTGATTTGGCGAAAGTTAT
GTCAGGGAGTCGTGATGGAAATGTAATTATTTGGGACACAAATACCTGCC
TATTGGAACAACAAGAAGAAATTGCTAGAAATATAgTTACAGATATCGTT
TGGTTTGATTCGTCGCAAGCAATCCAGTGTGGAGAAGACAAAACTGTAAA
GTTATGGGATTGCAGAAGATTACATGTTCTTGACACACTTCCCATGAAGC
AATACTTTCAGTCATGTTGCGCAGTGAATGATACTCAATTGGTGACTGGA
AGTGTTGGTGGCAATGGTAGAGGTTGTCACGTCACTCTCTGGGATTTACG
AGAACGTAGAGAAATAGTCACCTTAAATGGGCATGAGCAAAGTTTATCAT
CTGTTGCTTATTTCACCAATCGAAACAATCAACTGAGGATAATTTCAATT
GCTGACGATTGTTATGTCAAAGTTTGGGATCCAGCGAGACAAGAGTGCGC
ATGCTCACTTTATGTACCTGGAGCACAAGGATTGACTGCAATGATTCAAT
TATCTGAGGACAGCTTTATAATTGGTTCAATTCAAGGTGCTTTATATGAA
GTGAGATACAAATGTGACCCAACTGAGCAAATAGAAATAACTAGCACAAT
GTAAATGGGgaagaaactttcaaaacacagACTTGGCACAAACCAATTTA
CAACATTTGAATCAAGTCAAAGCAATGCTGTCAGTGGTGCTGGTGGTGCT
AGTTCTGGTGCTGGAAAACCTCCCAGTAGCTCTGGTTTGGCTTCACAAGG
AGAAGTGATCATCAACAGGGAATCCATTAGATCTCTGGCATTAATGAATG
GATTGTTGTACATTGGAGATACAGAGGgtattgtgaatgttttcgaTTTG
GAGCAGAAGCAGCAAAAAGAGACGCTGAAAGTGCACACAAAAGCTGTCAC
AAGGATAGTCGATGGGCCTGGTGATTCGTACTTTACTGCTTCTCGCGACA
AATCTGTCTCAAAGAGAATGCTGGGTAGCACAGATGGGGCGAAAATGGAA
GGTCATAGATTAGCAGTCACTGCCCTGGCTATGAAACCTGATTTGGCGAA
AGTTATGTCAGGGAGTCGTGATGGAAATGTAATTATTTGGGACACAAATA
CCTGCCTATTGGAACAACAAGAAGAAATTGCTAGAAATATAgTTACAGAT
ATCGTTTGGTTTGATTCGTCGCAAGCAATCCAGTGTGGAGAAGACAAAAC
TGTAAAGTTATGGGATTGCAGAAGATTACATGTTCTTGACACACTTCCCA
TGAAGCAATACTTTCAGTCATGTTGCGCAGTGAATGATACTCAATTGGTG
ACTGGAAGTGTTGGTGGCAATGGTAGAGGTTGTCACGTCACTCTCTGGGA
TTTACGAGAACGTAGAGAAATAGTCACCTTAAATGGGCATGAGCAAAGTT
TATCATCTGTTGCTTATTTCACCAATCGAAACAATCAACTGAGGATAATT
TCAATTGCTGACGATTGTTATGTCAAAGTTTGGGATCCAGCGAGACAAGA
GTGCGCATGCTCACTTTATGTACCTGGAGCACAAGGATTGACTGCAATGA
TTCAATTATCTGAGGACAGCTTTATAATTGGTTCAATTCAAGGTGCTTTA
TATGAAGTGAGATACAAATGTGACCCAACTGAGCAAATAGAAATAACTAG
CACAATGTAAATGGGgaagaaactttcaaaacacagACTTGGCACAAACC
AATTTACAACATTTGAATCAAGTCAAAGCAATGCTGTCAGTGGTGCTGGT
GGTGCTAGTTCTGGTGCTGGAAAACCTCCCAGTAGCTCTGGTTTGGCTTC
ACAAGGAGAAGTGATCATCAACAGGGAATCCATTAGATCTCTGGCATTAA
TGAATGGATTGTTGTACATTGGAGATACAGAGGgtattgtgaatgttttc
gaTTTGGAGCAGAAGCAGCAAAAAGAGACGCTGAAAGTGCACACAAAAGC
TGTCACAAGGATAGTCGATGGGCCTGGTGATTCGTACTTTACTGCTTCTC
GCGACAAATCTGTCTCAAAGAGAATGCTGGGTAGCACAGATGGGGCGAAA
ATGGAAGGTCATAGATTAGCAGTCACTGCCCTGGCTATGAAACCTGATTT
GGCGAAAGTTATGTCAGGGAGTCGTGATGGAAATGTAATTATTTGGGACA
CAAATACCTGCCTATTGGAACAACAAGAAGAAATTGCTAGAAATATAgTT
ACAGATATCGTTTGGTTTGATTCGTCGCAAGCAATCCAGTGTGGAGAAGA
CAAAACTGTAAAGTTATGGGATTGCAGAAGATTACATGTTCTTGACACAC
TTCCCATGAAGCAATACTTTCAGTCATGTTGCGCAGTGAATGATACTCAA
TTGGTGACTGGAAGTGTTGGTGGCAATGGTAGAGGTTGTCACGTCACTCT
CTGGGATTTACGAGAACGTAGAGAAATAGTCACCTTAAATGGGCATGAGC
AAAGTTTATCATCTGTTGCTTATTTCACCAATCGAAACAATCAACTGAGG
ATAATTTCAATTGCTGACGATTGTTATGTCAAAGTTTGGGATCCAGCGAG
ACAAGAGTGCGCATGCTCACTTTATGTACCTGGAGCACAAGGATTGACTG
CAATGATTCAATTATCTGAGGACAGCTTTATAATTGGTTCAATTCAAGGT
GCTTTATATGAAGTGAGATACAAATGTGACCCAACTGAGCAAATAGAAAT
AACTAGCACAATGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002742XLOC_002742Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004833-proteinTCONS_00004833-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004833-exon-sc0000049-1491911889:15640..15734TCONS_00004833-exon-sc0000049-1491911889:15640..15734Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:15640..15734TCONS_00004833-exon-sc0000049-1510915933:15640..15734Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:15640..15734TCONS_00004833-exon-sc0000049-1575043694:15640..15734Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:15981..16170TCONS_00004833-exon-sc0000049-1491911889:15981..16170Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:15981..16170TCONS_00004833-exon-sc0000049-1510915933:15981..16170Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:15981..16170TCONS_00004833-exon-sc0000049-1575043694:15981..16170Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:16515..16778TCONS_00004833-exon-sc0000049-1491911889:16515..16778Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:16515..16778TCONS_00004833-exon-sc0000049-1510915933:16515..16778Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:16515..16778TCONS_00004833-exon-sc0000049-1575043694:16515..16778Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:17287..17647TCONS_00004833-exon-sc0000049-1491911889:17287..17647Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:17287..17647TCONS_00004833-exon-sc0000049-1510915933:17287..17647Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:17287..17647TCONS_00004833-exon-sc0000049-1575043694:17287..17647Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:17761..17835TCONS_00004833-exon-sc0000049-1491911889:17761..17835Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:17761..17835TCONS_00004833-exon-sc0000049-1510915933:17761..17835Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:17761..17835TCONS_00004833-exon-sc0000049-1575043694:17761..17835Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:18193..18328TCONS_00004833-exon-sc0000049-1491911889:18193..18328Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:18193..18328TCONS_00004833-exon-sc0000049-1510915933:18193..18328Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:18193..18328TCONS_00004833-exon-sc0000049-1575043694:18193..18328Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:18590..18690TCONS_00004833-exon-sc0000049-1491911889:18590..18690Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:18590..18690TCONS_00004833-exon-sc0000049-1510915933:18590..18690Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:18590..18690TCONS_00004833-exon-sc0000049-1575043694:18590..18690Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:18979..19043TCONS_00004833-exon-sc0000049-1491911889:18979..19043Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:18979..19043TCONS_00004833-exon-sc0000049-1510915933:18979..19043Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:18979..19043TCONS_00004833-exon-sc0000049-1575043694:18979..19043Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:19593..19653TCONS_00004833-exon-sc0000049-1491911889:19593..19653Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:19593..19653TCONS_00004833-exon-sc0000049-1510915933:19593..19653Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:19593..19653TCONS_00004833-exon-sc0000049-1575043694:19593..19653Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:19894..19968TCONS_00004833-exon-sc0000049-1491911889:19894..19968Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:19894..19968TCONS_00004833-exon-sc0000049-1510915933:19894..19968Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:19894..19968TCONS_00004833-exon-sc0000049-1575043694:19894..19968Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:20551..20651TCONS_00004833-exon-sc0000049-1491911889:20551..20651Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:20551..20651TCONS_00004833-exon-sc0000049-1510915933:20551..20651Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:20551..20651TCONS_00004833-exon-sc0000049-1575043694:20551..20651Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:20839..20894TCONS_00004833-exon-sc0000049-1491911889:20839..20894Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:20839..20894TCONS_00004833-exon-sc0000049-1510915933:20839..20894Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:20839..20894TCONS_00004833-exon-sc0000049-1575043694:20839..20894Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:21636..21705TCONS_00004833-exon-sc0000049-1491911889:21636..21705Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:21636..21705TCONS_00004833-exon-sc0000049-1510915933:21636..21705Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:21636..21705TCONS_00004833-exon-sc0000049-1575043694:21636..21705Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1491911889:21977..22149TCONS_00004833-exon-sc0000049-1491911889:21977..22149Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1510915933:21977..22149TCONS_00004833-exon-sc0000049-1510915933:21977..22149Clytia hemisphaericaexon
TCONS_00004833-exon-sc0000049-1575043694:21977..22149TCONS_00004833-exon-sc0000049-1575043694:21977..22149Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:15640..22149 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.1438	33.2204	51.6889	57.9692	34.2658	28.1709	23.4448	22.8393	21.5827	18.0444	18.603	16.3586	11.1991	9.98844	14.4475	16.2566	21.8447	21.0975	11.8555	13.6678	18.0298	18.3552	37.9556	34.2111	13.3273	14.7378	16.5722	12.3483	27.8098	30.7135
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00004833 vs. Swiss-Prot (Human)
Match: WDR31 (WD repeat-containing protein 31 OS=Homo sapiens GN=WDR31 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.005e-35
Identity = 88/294 (29.93%), Postives = 151/294 (51.36%), Query Frame = 2 
Query:  869 ALMNGLLYIGDTEGIVNVFDLEQKQQKETLKVHTKAVTRIVDGPGDS-YFTASRDKSVSKRMLGSTDGAKME--GHRLAVTALAMKPDLAKVMSGSRDGNVIIWDTNTCLLEQQEEIARNIVTDIVWFDSSQAI-QCGEDKTVKLWDCRRLHVLDTLPMKQYFQSCC--AVNDTQLVTGSVGGNGRGCHVTLWDLRE-RREIVTLNGHEQSLSSVAYFTNRNNQLRIISIAD-DCYVKVWDPARQECACSLYVPGAQGLTAMIQLSEDSFIIGSIQGALYEVRYKCDPTEQIEI 1726
            AL + L   G  +  V  ++ +     +  K H   +T++   P  S +F+ASRD+ V    L  +   + +  GH + VT LA+ PD +++ +GSRD  +++WD  T    ++  ++RN+VT + W      I Q  EDKT++LWD R L V    P KQ+ Q+ C  +V+  + ++ S G  G GC  TLWDLR+ R  I    GH Q+++S  +       + +I+ +  DC VK+W+     C  +L + G+  LT++      S +  S    ++ +R   D ++ +E+
Sbjct:   70 ALNSDLCVSGGKDKTVVAYNWKTGNVVKRFKGHEHEITKVACIPKSSQFFSASRDRMVMMWDLHGSSQPRQQLCGHAMVVTGLAVSPDSSQLCTGSRDNTLLLWDVVTGQSVERASVSRNVVTHLCWVPREPYILQTSEDKTLRLWDSRGLQVAHMFPAKQHIQTYCEVSVDGHKCISCSNGFGGEGCEATLWDLRQTRNRICEYKGHFQTVASCVFLPRALALMPLIATSSHDCKVKIWNQDTGACLFTLSLDGSGPLTSLAVGDAISLLCASFNRGIHLLRM--DHSQGLEL 361
The following BLAST results are available for this feature:
BLAST of TCONS_00004833 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR311.005e-3529.93WD repeat-containing protein 31 OS=Homo sapiens GN... [more]
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