TCONS_00004680 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004680
Unique NameTCONS_00004680
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1818

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004680 ID=TCONS_00004680|Name=TCONS_00004680|organism=Clytia hemisphaerica|type=transcript|length=1818bp
GCACGGCTGATTCTTGAACGTTAATCGAATACGGTAAATGCCATACTGCC
TACTAATCATTGGCATTTGGCAAAAAGGAGCAAAAGGACAGAAGTAGACA
GTAGATATTCAGGTATGatGACAGTTAAAACTACAATGGCTGGTATATCA
CTATCAAATTTACAAGGTGCATTGAATGAGATTGGCTTAACTGAAAAAGA
GTTGTACATTGGTGGTTTATTAGCCGAGTTATTAGTTCACCATGAGATAT
TGAGTGTCTCTTTTATTAACAGTCAATTGAATGGCAAGAAAAAAGGATTC
TCTATCACTTTTGATTTCTTGAGAAAAACCAAGTTTGAGTTGGCTGTCAT
CGGGTGTGATTTAAAGATCATGAGAATGAACCCAAATTATGTTGAAGATG
AAAGATTTGTTGGGTTTAGTAAAAGTGACGATTTTTATAATCAGCTTTTC
CAAATCATACAGAAAGATAATCAAGCTTATGTCCAGTTGAAGAGAAAGCT
CATCAACGAAGACAATAACAATACCGCTAGACTGGATGATGTTTTTACAT
GGTCTTCTAACAAGTTTAAATTTAACGTCCCGTTTTTATTGAGAAACAGT
CAcaagtttgaaatatttatgGACGAGGATGTATCTTATGTAAGGCTGGC
CGAAGTTCATCAGATGGCAATGCGCATTGAATTTGGTCAAGATCAAATTA
ATGAAATCATTCAAAGTGATAAGAGAAAATTAGTGGTTGAATGTCTGAAA
AGGTTGCTGGCAAAGTTAGATCATCCTGTAAACCAGGGCACCTTTCAAGC
TTGTATTGATTACGGCTTCCCACCTATTGATAAACTGTTTATGCAATGCA
ATGGTCACCTGTTTGTCTTTGGTGGAGCTGACAGAAAGATTGCACTAAAG
GGAAGTAAAGCTGCAAGAGAAATTCTCAAGTCGTCCCATGCTAGTCCCCC
ACAAGGTTATAAATCTGAACCAAAGAAATATAGCACATTTACTACAGCAC
CACATACAACAACACCGGCACCTAAACAGAATCTGGCTTCGACCTCACCA
ATACCAAACAACACTATTCCTCAATTGCCAACTACTGCAATACAACAGTT
GTCAAGCACTGGAAAATCAATTTTATCAGCTTCTCTTCTATCAGATGTGG
AAAAAGCTTACCAGAAAGGCCAAACTGTTGTTGTGGTAGGAAAAGATTCA
ACACTACCAGTAGTATTTCTTACTGAGAATACTTCAAATGTTACCAATTT
GGAAATGTTAGTTGGACTCAAATCTCAATTGGAATCAGAGATCCATAgaa
gaacttttgcaaaataaaagattttggtataatgaactttttactgtttt
ttaaaaattcagaTTTTACAAATGTAATTTTTCATTATCTATTCTTGTAT
GATACTTTATATGAAtattgtatattataaaacctAGACCTGTACCTGGA
AATTAAGATCTTACTCCCTTATAACCTGCAATGACATTTTTTTCTTGGAT
GAAATTTCTAAAGCATAGCTTTataaaaattcactatttttTGTAAGTGT
CTCCAAAGCTTGCTCTTATCAACTTGTTTTCTTCCATTACAGTTCGCCTT
TTTGTAACCtttattaaaaagcaaatttctTAAAGCCTGTTGAATGCCTC
CAGGGTCTAGGTTCAGGTTTTGCTTTTATAGTATGCCAtctattttatca
aattttgattattatttAGACATTTTATTTAACGAAActtagaaaattta
gaattttaagcactgttttggattttcaaatttaccaaaataaaaTTAGT
GAGATATTTCTCTTATAG
Run BLAST on NCBI

protein sequence of TCONS_00004680-protein

>TCONS_00004680-protein ID=TCONS_00004680-protein|Name=TCONS_00004680-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
MMTVKTTMAGISLSNLQGALNEIGLTEKELYIGGLLAELLVHHEILSVSF
INSQLNGKKKGFSITFDFLRKTKFELAVIGCDLKIMRMNPNYVEDERFVG
FSKSDDFYNQLFQIIQKDNQAYVQLKRKLINEDNNNTARLDDVFTWSSNK
FKFNVPFLLRNSHKFEIFMDEDVSYVRLAEVHQMAMRIEFGQDQINEIIQ
SDKRKLVVECLKRLLAKLDHPVNQGTFQACIDYGFPPIDKLFMQCNGHLF
VFGGADRKIALKGSKAAREILKSSHASPPQGYKSEPKKYSTFTTAPHTTT
PAPKQNLASTSPIPNNTIPQLPTTAIQQLSSTGKSILSASLLSDVEKAYQ
KGQTVVVVGKDSTLPVVFLTENTSNVTNLEMLVGLKSQLESEIHRRTFAK
Run BLAST on NCBI

transcript from alignment at sc0000047:328482..336974-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004680 ID=TCONS_00004680|Name=TCONS_00004680|organism=Clytia hemisphaerica|type=transcript|length=8493bp|location=Sequence derived from alignment at sc0000047:328482..336974- (Clytia hemisphaerica)
GCACGGCTGATTCTTGAACGTTAATCGAATACGGTAAATGCCATACTGCC TACTAATCATTGGCATTTGGCAAAAAGGAGCAAAAGGACAGAAGTAGACA GTAGATATTCAGGTATGGTAAGTTTTTCTCTACAAATTGTTGTTTTCTTC ATTGAATTTGACCTTTAAAAAGTAATTCAGCGATGACCTAAACATGATGC AAAGCTATTATTCATATAAACTGCATTTATAGCTAGATAGCTACTAGAAG AAAAACTCTGAGCTCCGCCGCAAGAACCAAAATCTATTATTGCCACGGGA GATAAATCCCATGCAGACGAAAGATGCCAAAGCAAAATACCTAAGAAGAA AGTTCTCTCCAAAAAAATAAATTCAGGCGGTGTCAACCAAACCCTCCTTG AACCATTTTCTTAATTAAAAAATCAAAATCAAAATAAAGCTTTTCCATGA CCAAATTCTGATGGGACACCCTCCTTTCTGTGTCGGAATTATCAATTATC AATTAGACAAGGGATGATTAATATGAAAGCTTGAATCACTGATTGAAATA GGATTATTCCTCTTTGACCACTAAGCAAAGAAAAACAGTTTCAACCTTTC TATAAATTTCAGCTGAGAAAAAGGGTGTTGGAATTAGAGGAGGGGTGTCG ACATTAGACCAAGTTACGGCACCTATTGAACTTATTACAAAAATTTCTTA ACTTGATTTTAGTGCGATTAGCTAAAGTTTCCAAACGGTGTCAATCGAAC GAATCGAACGCCAAATCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGCATGATACAGTAATTA TGCATGGCTCTATCATTGTTCTTATGGCTGGACTACATAATTATTCAACA GGACGTCCTCTTTGAAAAAAGGTCTATTGAACGCGCAATTGAACGCAATC GAATAATTGTAATTCTATTGTCAAACGCAATAACGCAATCGAACATTACC CAGGATTTGCCTTGCAATTGCTTCGATTACATTCGATTGTATTCGATTGT ATTCAATTACGACGTTCGATAGACCTTTTTTTAAAGAGGCAGTTGAATAA TTATGTACTCCAGCATAAAAACAATGATACAGCCATGCATAATTACTGTA TATACAGTATCATGCATATTTTAAAAATTATGCATGGCTGTATCATTGTT TTTATGCTGGAGTACATAATTATTCCTCTATTTGATTCAATTTTAGATTT TATTCGCTTTGGTACGATACTTAAGCGCTCGGCTGCCCATGCTAAAAAGC CCTAACAGAGTGATCCAATTTAATTTAATCGCAATCAAACTCATTGAACA TAATCTTCAGTGCGTCACAAACAGCCATATAAACAAAACTCAACATTCTC ACAAAAGTTGTCTTTTTGATTTACCAAACATTCGTTCACTTCACAATAAT TTATGTAATTGCAATTTTGTTCAGTCCACAGTCGGCTTCAACATATACAC GTGTTTTTATTTATGTGACCGAAGTGCCTACTAAAACAATCCGGGAGTAA GTGGCGAAGCAACACAGCAGATTGTTTGTAAAGTAAAGAAATATCTTTTG GCATTGACAATCAAATATAAATATATTATATTATATTTCCTTAATTCAAA AATCACAAATTCATTTTTCATTCGCGAAAAAAAAAAAATAATGAATTAAT ATTACATACTAAGACGCCCCCGTCTTTTACTCTCGTTTAATTTCCTTTAC TCTCGTTTAATTTCCAATCTCGGAACGGGCAAAATGCCTGTCCGCCCAAT ATCCACCCAATCAGCTTAAATTTGCTTTCATTGTCCTTTGACTTTCAAAA AATAGTATTTAAAAATTATGAATTTATAATAATTACAAAAAACAAAAAGT TTGATACTTCATTAGGGAAATATTCAATAAATTCCTAGTTTCAATTTTCA GTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCAATTTTTGC GTCACACAAACTTTCTCGGCCGCTCGTAATAATTATGCATTGCCAAATTT GGTTCTCCATTGTCAAGTCAGGATCGATGGTGAGGTCACCTAAGCATAAA AAAGAAAAGATTTCATCAGTTTTATGCATATATTAATTTGCGAGATATTC TATTCCCCGTGTGAGCGCACTTCTCGTAGACTAGTCGGAATACTTTCTTT TACTCGCGGGATTGATGGTAACTTTTCATCTTCGTTATTTTTAAAGTGAA GCACAACCGAAAAAAACACGAAAACTTCAGAAAGTAGCGTATTTCCAGTG AGTAAACGATTCTGACAATTAACAAAATTGATGATAATGATTTTTTTCGG TCAGGCAAATGTCTCGTATTTGGGGTTCTAGTCTTGACCCCTAAGCCTAC GCGAGATTAAAGCGTTTGGGTAAACAAGACAAAACTGGTGTTTTGAACAG CCCTGTGAATTCAGACAAAATTTTGCCGACCTAGAGGTCATTTTAGGTCG GCAAAGCCGTCCTAAGTAGCTTGTTTACGTCGGCAAAGACAAAATAGGAA GAAAATTAACGAACTAACAAAATCAGCTGCTCTATAATTGTGTTATTAAG TTTTATTTTTTATAAAGAGAATGGAATGAGGCTTGATTATCATGTGTTAT CAAATGATAACACAATTAGATTAACCTAACAAATAATATTTTTCCTCTTT AGGTCAGCTTTGCTGACCCAAAACATTTCTTTTGTGGGCACGCCGACCTA GAGTGTAAATTACGTCGGCAAATAAAAGCCGACTTCAGCTCAACTTACGT TGGCTTTCAAGTCGGCATTGCCGAATGCCGACCTGGATTCACAGGGCTGT TTGAAGCGCTTCCGTGCAATCCAAATATCGCTGTTTGTGACGCACTGATC TTAATCGAACGAAATTGGAATGTAATTGACAATCAATCAAACCAATCGAA CATAGTCAACTATCAATCGAACCAATCTAACTATCGAATATTACCCAGGA ATCGGCCTTTCGATTGAGATTCGAGTAAGTTCGACAATCAAATTGCAATT ATTCCCTTGCGTTTGATTACGTTCGATTGGTTCGATTGCAATTTTTGTTC GAAGTTTTTTGATTGACACCGTCTGTAATTCAATGAAGTTCGATTGAAGG TAAATAGGGTTCAATTGATGTTTGATGAGTCGAATGCCGATGCGAATTAG AATGACTTTGACTGTACTTTAAAAACAAATATTAAGTACCTAAAAGCAGA GAGTCACAGAGCTGTATTCCTTTTATTACACACCGCAAACGTCTTAATCT CCAAGTGTAGAAGTTATCATGTGATCGTGGCGCGTTCCTTTGTGGATTCA GGCTTTAGGCCCATAACTTTTGATCTAGAAAAGTTGGGACTTTGGTGTAA TACACTTTTTGCTCAGTTTGAAGAGCTCTATTGTGTGATATAGGTATTTT TTTAATTTGAAGACCCCCCCAAAATCATGAATTTCCAGGCCTTGCAATTT TGCCTGGAAACGCAAAAAATCGCCAATTACTCGTTACTTGCACGACAATA TCGTGGAAACTTTTTGATTTTAGAATCTACATATACTAATTCGCGAGTTT CCACCAAAAAAAGTTAGTTCTAAGATGTGTGTCACGAAATGAAACATTTA TCAACCTCAGCAGCGGGACTAAAAGAATGTGTGATGTTATAATTACTGCT TTCAGTTTGCGTGTTTTGAAAGTTTGCTGTGTGTACTCCTTCATGGAATT TTTTAATGGCATGAAAATATGTTTCATTTTTACGTAACTTTGAACCCTTT TAATTTTTTTTCTATGTATGCTAAAGCGTTCCAGTTTTTACTAAAAGAAA GACCGCGATTTCAGCTTTCCAGTGCTATAACACTGTGGACATGGGCTAGG CGGCAGATTGGTAAATTCCCAGAATGTTTTTGCAACATTTCAAAATTTGT CTGCTGCGGACGGAAAAAAGTTGCAACTCTTGATGAACAAATGTTTCTGG AAATAATAAAACATATTTGAAAGCTGAAACTTTGTATATTTATCAGAAAA AGGGTGTTGAGGAATTTAAAAAATCACATCAGCTAATTCTGGTTCTTTCA TTTTCATGTAATTTTATCACTTTGTTGCTTCTCTAGCATAGGAATGTCCC TAAAAAAAGTATTTATTTCTGCTGATGTGGATTTTATTTTTATTTTCAGG TGATGCCAAAAGTGCATTAATGTTTACACATCTGAAATAAAAATTAAAAA ACTGTCCACTTTGCTTGTGCGAGAAATTCGAAATTGCCAATTATCCAGGC AAAGACTTACTAAATAAAATAAATGGACTGAAATTGTTGCAAACTGTCAA CATCGATATTAACATTTATTCGATAAAAACATACTGGCCTTTGTCAAAAG ATCTTTCATAGTATTAAGAAAATAAAAATGTTTTGCCTAAGATTCCCTTT CCCACACTAAGATTCTCCAGAAATTTCCGGGATTTTTTTGCTATTTTTCC TGCCACGAGGTTGGAAAAAGTTTTCTTCTAAATAAAGGTGGGGAAAATCT TGTGTTTATTTACGAAACAGTCACTTTCCAAAGCTCTTGTTTCAACTACC TGGAGCTCTGGTCTTTTTCCGGTAGAAGAGTGACAGTTGATATTCAATGT ACTTGAATGGGATAATTTTTTTTTGAACCTACCTCCGGGTACCCCGGTGG AGGTTCTATAAATTAACCCATGTCCGTCCGTTCGTCCGTCCGTCCGTCTG TTACTAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCA CAATGATGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGA GAAAAAAATTATTTGGGCAAATTTGGGCCAAAAACCTCCCTAAAAATAGG GTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTT GTACAAAGATGGAGGGCAAAATTCTCTAAAGAATGNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTT TCGAAAGAAAATATATTTGGGCAAATTTGGGCCAAAAACTGCCTAAAAAT AGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTATTTTTTTCTTATTT TTTGTACAAAGATAGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGTTT TTTCCCGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTCGTATTTTGG GGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTCTCAAAGTTGAC TCATTACTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCT AAAATGTGACGGAGCCTGATTTTCGAAAAAATATATATTTCGGCAAATTT GGGCCAAAAACTGCCCAAAAATAGGGATTTTGGGCCTGAATGGTTTAAGT GATTTTCGTATTTGGGGAAATTCCATTTTACTATTTTACATTATTCAACA CACAAGCTTTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCACTTT TTTCTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCATTCAGCATGT TGCTTGTTTGTTTTTTTTTAATGGGATAAATTTTCTCCTGAATTAAATTT TGCAGATTTTTTGATTTTGTTCTCAACCCATGAAATTAAGTCCCAATGGA AATTGGAAAGGTGCTTTCTGTGAAGAATTTTCTATCTATTAAAACTCAAA AAAAATGTCAAATAACTAATTTTAAAATGTTTACTGGTATCAAAGAAGCG CTAATAATGCCTATTTCAACAATCAACATGCACAATTTGACAGTTTTTCT GCAGATATAAGTGTAATTAGACATCATGCCTGACACTCCGGCTACATAAA CATAGAAATGTTCTACACAACCGTGCATTGATGATTGTAGGATGATTGTG TACCAATTCTCCCTTAAAACTCAACTTAACTTGTAAGCAAATGTGTTGTT GTTTGTGATTGAGTCAAACTGGAAAGTGAAAACTGACAATGAAGGGCGAG GCTTTTGGAACTTGTTTGCGCAATAACACTTGCTCAAATTCGTTTGAATT CAATCAAAGTCAATAATAACCAGTTAAAGGTTATTGTTTATTCAAACAAA TCTGTTTGAAAGTTTACAATTCTATTTGAAAACAACTTTGGTCGTCATGT CTTTAGGCTAGCGCTCCTTTAAATCTTGAAAAGATTAAAAATGTTTCAAA AATCTTTTCAGAATGTGAAATTCCTTTTTTTCCATTTTTCAGATGACAGT TAAAACTACAATGGCTGGTATATCACTATCAAATTTACAAGGTGCATTGA ATGAGATTGGCTTAACTGAAAAAGAGTTGTACATTGGTGGTTTATTAGCC GAGTTATTAGTTCACCATGAGATATTGAGTGTCTCTTTTATTAACAGTCA ATTGAATGGCAAGAAAAAAGGATTCTCTATCACTTTTGATTTCTTGAGAA AAACCAAGTTTGAGTTGGCTGTCATCGGGTGTGATTTAAAGATCATGAGA ATGAACCCAAATTATGTTGAAGATGAAAGATTTGTTGGGTTTAGTAAAAG TGACGATTTTTATAATCAGCTTTTCCAAATCATACAGAAAGATAATCAAG CTTATGTCCAGTTGAAGAGAAAGCTCATCAACGAAGACAATAACAATACC GCTAGACTGGATGATGTTTTTACATGGTCTTCTAACAAGTTTAAATTTAA CGTCCCGTTTTTATTGAGAAACAGTCACAAGTTTGAAATATTTATGGACG AGGATGTATCTTATGTAAGGCTGGCCGAAGTTCATCAGATGGCAATGCGC ATTGAATTTGGTCAAGATCAAATTAATGAAATCATTCAAAGTGATAAGAG AAAATTAGTGGTTGAATGTCTGAAAAGGTTGCTGGCAAAGTTAGATCATC CTGTAAACCAGGGCACCTTTCAAGCTTGTATTGATTACGGCTTCCCACCT ATTGATAAACTGTTTATGCAATGCAATGGTCACCTGTTTGTCTTTGGTGG AGCTGACAGAAAGATTGCACTAAAGGGAAGTAAAGCTGCAAGAGAAATTC TCAAGTCGTCCCATGCTAGTCCCCCACAAGGTTATAAATCTGAACCAAAG AAATATAGCACATTTACTACAGCACCACATACAACAACACCGGCACCTAA ACAGAATCTGGCTTCGACCTCACCAATACCAAACAACACTATTCCTCAAT TGCCAACTACTGCAATACAACAGTTGTCAAGCACTGGAAAATCAATTTTA TCAGCTTCTCTTCTATCAGATGTGGAAAAAGCTTACCAGAAAGGCCAAAC TGTTGTTGTGGTAGGAAAAGATTCAACACTACCAGTAGTATTTCTTACTG AGAATACTTCAAATGTTACCAATTTGGAAATGTTAGTTGGACTCAAATCT CAATTGGAATCAGAGATCCATAGAAGAACTTTTGCAAAATAAAAGATTTT GGTATAATGAACTTTTTACTGTTTTTTAAAAATTCAGATTTTACAAATGT AATTTTTCATTATCTATTCTTGTATGATACTTTATATGAATATTGTATAT TATAAAACCTAGACCTGTACCTGGAAATTAAGATCTTACTCCCTTATAAC CTGCAATGACATTTTTTTCTTGGATGAAATTTCTAAAGCATAGCTTTATA AAAATTCACTATTTTTTGTAAGTGTCTCCAAAGCTTGCTCTTATCAACTT GTTTTCTTCCATTACAGTTCGCCTTTTTGTAACCTTTATTAAAAAGCAAA TTTCTTAAAGCCTGTTGAATGCCTCCAGGGTCTAGGTTCAGGTTTTGCTT TTATAGTATGCCATCTATTTTATCAAATTTTGATTATTATTTAGACATTT TATTTAACGAAACTTAGAAAATTTAGAATTTTAAGCACTGTTTTGGATTT TCAAATTTACCAAAATAAAATTAGTGAGATATTTCTCTTATAG

Coding sequence (CDS) from alignment at sc0000047:328482..336974-

>TCONS_00004680 ID=TCONS_00004680|Name=TCONS_00004680|organism=Clytia hemisphaerica|type=CDS|length=2406bp|location=Sequence derived from alignment at sc0000047:328482..336974- (Clytia hemisphaerica)
ATGACAGTTAAAACTACAATGGCTGGTATATCACTATCAAATTTACAAGG
TGCATTGAATGAGATTGGCTTAACTGAAAAAGAGTTGTACATTGGTGGTT
TATTAGCCGAGTTATTAGTTCACCATGAGATATTGAGTGTCTCTTTTATT
AACAGTCAATTGAATGGCAAGAAAAAAGGATTCTCTATCACTTTTGATTT
CTTGAGAAAAACCAAGTTTGAGTTGGCTGTCATCGGGTGTGATTTAAAGA
TCATGAGAATGAACCCAAATTATGTTGAAGATGAAAGATTTGTTGGGTTT
AGTAAAAGTGACGATTTTTATAATCAGCTTTTCCAAATCATACAGAAAGA
TAATCAAGCTTATGTCCAGTTGAAGAGAAAGCTCATCAACGAAGACAATA
ACAATACCGCTAGACTGGATGATGTTTTTACATGGTCTTCTAACAAGTTT
AAATTTAACGTCCCGTTTTTATTGAGAAACAGTCACAAGTTTGAAATATT
TATGGACGAGGATGTATCTTATGTAAGGCTGGCCGAAGTTCATCAGATGG
CAATGCGCATTGAATTTGGTCAAGATCAAATTAATGAAATCATTCAAAGT
GATAAGAGAAAATTAGTGGTTGAATGTCTGAAAAGGTTGCTGGCAAAGTT
AGATCATCCTGTAAACCAGGGCACCTTTCAAGCTTGTATTGATTACGGCT
TCCCACCTATTGATAAACTGTTTATGCAATGCAATGGTCACCTGTTTGTC
TTTGGTGGAGCTGACAGAAAGATTGCACTAAAGGGAAGTAAAGCTGCAAG
AGAAATTCTCAAGTCGTCCCATGCTAGTCCCCCACAAGGTTATAAATCTG
AACCAAAGAAATATAGCACATTTACTACAGCACCACATACAACAACACCG
GCACCTAAACAGAATCTGGCTTCGACCTCACCAATACCAAACAACACTAT
TCCTCAATTGCCAACTACTGCAATACAACAGTTGTCAAGCACTGGAAAAT
CAATTTTATCAGCTTCTCTTCTATCAGATGTGGAAAAAGCTTACCAGAAA
GGCCAAACTGTTGTTGTGGTAGGAAAAGATTCAACACTACCAGTAGTATT
TCTTACTGAGAATACTTCAAATGTTACCAATTTGGAAATGTTAGTTGGAC
TCAAATCTCAATTGGAATCAGAGATCCATAGAAGAACTTTTGCAAAATAA
ATGATGACAGTTAAAACTACAATGGCTGGTATATCACTATCAAATTTACA
AGGTGCATTGAATGAGATTGGCTTAACTGAAAAAGAGTTGTACATTGGTG
GTTTATTAGCCGAGTTATTAGTTCACCATGAGATATTGAGTGTCTCTTTT
ATTAACAGTCAATTGAATGGCAAGAAAAAAGGATTCTCTATCACTTTTGA
TTTCTTGAGAAAAACCAAGTTTGAGTTGGCTGTCATCGGGTGTGATTTAA
AGATCATGAGAATGAACCCAAATTATGTTGAAGATGAAAGATTTGTTGGG
TTTAGTAAAAGTGACGATTTTTATAATCAGCTTTTCCAAATCATACAGAA
AGATAATCAAGCTTATGTCCAGTTGAAGAGAAAGCTCATCAACGAAGACA
ATAACAATACCGCTAGACTGGATGATGTTTTTACATGGTCTTCTAACAAG
TTTAAATTTAACGTCCCGTTTTTATTGAGAAACAGTCACAAGTTTGAAAT
ATTTATGGACGAGGATGTATCTTATGTAAGGCTGGCCGAAGTTCATCAGA
TGGCAATGCGCATTGAATTTGGTCAAGATCAAATTAATGAAATCATTCAA
AGTGATAAGAGAAAATTAGTGGTTGAATGTCTGAAAAGGTTGCTGGCAAA
GTTAGATCATCCTGTAAACCAGGGCACCTTTCAAGCTTGTATTGATTACG
GCTTCCCACCTATTGATAAACTGTTTATGCAATGCAATGGTCACCTGTTT
GTCTTTGGTGGAGCTGACAGAAAGATTGCACTAAAGGGAAGTAAAGCTGC
AAGAGAAATTCTCAAGTCGTCCCATGCTAGTCCCCCACAAGGTTATAAAT
CTGAACCAAAGAAATATAGCACATTTACTACAGCACCACATACAACAACA
CCGGCACCTAAACAGAATCTGGCTTCGACCTCACCAATACCAAACAACAC
TATTCCTCAATTGCCAACTACTGCAATACAACAGTTGTCAAGCACTGGAA
AATCAATTTTATCAGCTTCTCTTCTATCAGATGTGGAAAAAGCTTACCAG
AAAGGCCAAACTGTTGTTGTGGTAGGAAAAGATTCAACACTACCAGTAGT
ATTTCTTACTGAGAATACTTCAAATGTTACCAATTTGGAAATGTTAGTTG
GACTCAAATCTCAATTGGAATCAGAGATCCATAGAAGAACTTTTGCAAAA
TAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002638XLOC_002638Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004680-proteinTCONS_00004680-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004680-exon-sc0000047-1575043694:336858..336974TCONS_00004680-exon-sc0000047-1575043694:336858..336974Clytia hemisphaericaexon
TCONS_00004680-exon-sc0000047-1575043694:328482..330182TCONS_00004680-exon-sc0000047-1575043694:328482..330182Clytia hemisphaericaexon
TCONS_00004680-exon-sc0000047-1510915933:336858..336974TCONS_00004680-exon-sc0000047-1510915933:336858..336974Clytia hemisphaericaexon
TCONS_00004680-exon-sc0000047-1510915933:328482..330182TCONS_00004680-exon-sc0000047-1510915933:328482..330182Clytia hemisphaericaexon
TCONS_00004680-exon-sc0000047-1491911889:336858..336974TCONS_00004680-exon-sc0000047-1491911889:336858..336974Clytia hemisphaericaexon
TCONS_00004680-exon-sc0000047-1491911889:328482..330182TCONS_00004680-exon-sc0000047-1491911889:328482..330182Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000047supercontigsc0000047:328482..336974 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.7889e-09 8.75381e-06 0.4282 8.8815e-08 7.50798 6.06953 5.17153 5.04782 2.41924 1.55979 0 0.962771 0.639613 0.486767 0.880803 0.990447 0 1.56 9.95015e-07 1.75612 1.10696 0 4.31041 4.32837 5.12691 6.29044 3.30853 1.28865 0.00127001 4.87891
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004680 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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