XLOC_002638 (gene) - C. hemisphaerica

Overview
NameXLOC_002638
Unique NameXLOC_002638
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000047:328482..336987-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002638 ID=XLOC_002638|Name=XLOC_002638|organism=Clytia hemisphaerica|type=gene|length=8506bp|location=Sequence derived from alignment at sc0000047:328482..336987- (Clytia hemisphaerica)
GTAGAAGCTGTCGGCACGGCTGATTCTTGAACGTTAATCGAATACGGTAA ATGCCATACTGCCTACTAATCATTGGCATTTGGCAAAAAGGAGCAAAAGG ACAGAAGTAGACAGTAGATATTCAGGTATGGTAAGTTTTTCTCTACAAAT TGTTGTTTTCTTCATTGAATTTGACCTTTAAAAAGTAATTCAGCGATGAC CTAAACATGATGCAAAGCTATTATTCATATAAACTGCATTTATAGCTAGA TAGCTACTAGAAGAAAAACTCTGAGCTCCGCCGCAAGAACCAAAATCTAT TATTGCCACGGGAGATAAATCCCATGCAGACGAAAGATGCCAAAGCAAAA TACCTAAGAAGAAAGTTCTCTCCAAAAAAATAAATTCAGGCGGTGTCAAC CAAACCCTCCTTGAACCATTTTCTTAATTAAAAAATCAAAATCAAAATAA AGCTTTTCCATGACCAAATTCTGATGGGACACCCTCCTTTCTGTGTCGGA ATTATCAATTATCAATTAGACAAGGGATGATTAATATGAAAGCTTGAATC ACTGATTGAAATAGGATTATTCCTCTTTGACCACTAAGCAAAGAAAAACA GTTTCAACCTTTCTATAAATTTCAGCTGAGAAAAAGGGTGTTGGAATTAG AGGAGGGGTGTCGACATTAGACCAAGTTACGGCACCTATTGAACTTATTA CAAAAATTTCTTAACTTGATTTTAGTGCGATTAGCTAAAGTTTCCAAACG GTGTCAATCGAACGAATCGAACGCCAAATCAATNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGCAT GATACAGTAATTATGCATGGCTCTATCATTGTTCTTATGGCTGGACTACA TAATTATTCAACAGGACGTCCTCTTTGAAAAAAGGTCTATTGAACGCGCA ATTGAACGCAATCGAATAATTGTAATTCTATTGTCAAACGCAATAACGCA ATCGAACATTACCCAGGATTTGCCTTGCAATTGCTTCGATTACATTCGAT TGTATTCGATTGTATTCAATTACGACGTTCGATAGACCTTTTTTTAAAGA GGCAGTTGAATAATTATGTACTCCAGCATAAAAACAATGATACAGCCATG CATAATTACTGTATATACAGTATCATGCATATTTTAAAAATTATGCATGG CTGTATCATTGTTTTTATGCTGGAGTACATAATTATTCCTCTATTTGATT CAATTTTAGATTTTATTCGCTTTGGTACGATACTTAAGCGCTCGGCTGCC CATGCTAAAAAGCCCTAACAGAGTGATCCAATTTAATTTAATCGCAATCA AACTCATTGAACATAATCTTCAGTGCGTCACAAACAGCCATATAAACAAA ACTCAACATTCTCACAAAAGTTGTCTTTTTGATTTACCAAACATTCGTTC ACTTCACAATAATTTATGTAATTGCAATTTTGTTCAGTCCACAGTCGGCT TCAACATATACACGTGTTTTTATTTATGTGACCGAAGTGCCTACTAAAAC AATCCGGGAGTAAGTGGCGAAGCAACACAGCAGATTGTTTGTAAAGTAAA GAAATATCTTTTGGCATTGACAATCAAATATAAATATATTATATTATATT TCCTTAATTCAAAAATCACAAATTCATTTTTCATTCGCGAAAAAAAAAAA ATAATGAATTAATATTACATACTAAGACGCCCCCGTCTTTTACTCTCGTT TAATTTCCTTTACTCTCGTTTAATTTCCAATCTCGGAACGGGCAAAATGC CTGTCCGCCCAATATCCACCCAATCAGCTTAAATTTGCTTTCATTGTCCT TTGACTTTCAAAAAATAGTATTTAAAAATTATGAATTTATAATAATTACA AAAAACAAAAAGTTTGATACTTCATTAGGGAAATATTCAATAAATTCCTA GTTTCAATTTTCAGTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GCGCAATTTTTGCGTCACACAAACTTTCTCGGCCGCTCGTAATAATTATG CATTGCCAAATTTGGTTCTCCATTGTCAAGTCAGGATCGATGGTGAGGTC ACCTAAGCATAAAAAAGAAAAGATTTCATCAGTTTTATGCATATATTAAT TTGCGAGATATTCTATTCCCCGTGTGAGCGCACTTCTCGTAGACTAGTCG GAATACTTTCTTTTACTCGCGGGATTGATGGTAACTTTTCATCTTCGTTA TTTTTAAAGTGAAGCACAACCGAAAAAAACACGAAAACTTCAGAAAGTAG CGTATTTCCAGTGAGTAAACGATTCTGACAATTAACAAAATTGATGATAA TGATTTTTTTCGGTCAGGCAAATGTCTCGTATTTGGGGTTCTAGTCTTGA CCCCTAAGCCTACGCGAGATTAAAGCGTTTGGGTAAACAAGACAAAACTG GTGTTTTGAACAGCCCTGTGAATTCAGACAAAATTTTGCCGACCTAGAGG TCATTTTAGGTCGGCAAAGCCGTCCTAAGTAGCTTGTTTACGTCGGCAAA GACAAAATAGGAAGAAAATTAACGAACTAACAAAATCAGCTGCTCTATAA TTGTGTTATTAAGTTTTATTTTTTATAAAGAGAATGGAATGAGGCTTGAT TATCATGTGTTATCAAATGATAACACAATTAGATTAACCTAACAAATAAT ATTTTTCCTCTTTAGGTCAGCTTTGCTGACCCAAAACATTTCTTTTGTGG GCACGCCGACCTAGAGTGTAAATTACGTCGGCAAATAAAAGCCGACTTCA GCTCAACTTACGTTGGCTTTCAAGTCGGCATTGCCGAATGCCGACCTGGA TTCACAGGGCTGTTTGAAGCGCTTCCGTGCAATCCAAATATCGCTGTTTG TGACGCACTGATCTTAATCGAACGAAATTGGAATGTAATTGACAATCAAT CAAACCAATCGAACATAGTCAACTATCAATCGAACCAATCTAACTATCGA ATATTACCCAGGAATCGGCCTTTCGATTGAGATTCGAGTAAGTTCGACAA TCAAATTGCAATTATTCCCTTGCGTTTGATTACGTTCGATTGGTTCGATT GCAATTTTTGTTCGAAGTTTTTTGATTGACACCGTCTGTAATTCAATGAA GTTCGATTGAAGGTAAATAGGGTTCAATTGATGTTTGATGAGTCGAATGC CGATGCGAATTAGAATGACTTTGACTGTACTTTAAAAACAAATATTAAGT ACCTAAAAGCAGAGAGTCACAGAGCTGTATTCCTTTTATTACACACCGCA AACGTCTTAATCTCCAAGTGTAGAAGTTATCATGTGATCGTGGCGCGTTC CTTTGTGGATTCAGGCTTTAGGCCCATAACTTTTGATCTAGAAAAGTTGG GACTTTGGTGTAATACACTTTTTGCTCAGTTTGAAGAGCTCTATTGTGTG ATATAGGTATTTTTTTAATTTGAAGACCCCCCCAAAATCATGAATTTCCA GGCCTTGCAATTTTGCCTGGAAACGCAAAAAATCGCCAATTACTCGTTAC TTGCACGACAATATCGTGGAAACTTTTTGATTTTAGAATCTACATATACT AATTCGCGAGTTTCCACCAAAAAAAGTTAGTTCTAAGATGTGTGTCACGA AATGAAACATTTATCAACCTCAGCAGCGGGACTAAAAGAATGTGTGATGT TATAATTACTGCTTTCAGTTTGCGTGTTTTGAAAGTTTGCTGTGTGTACT CCTTCATGGAATTTTTTAATGGCATGAAAATATGTTTCATTTTTACGTAA CTTTGAACCCTTTTAATTTTTTTTCTATGTATGCTAAAGCGTTCCAGTTT TTACTAAAAGAAAGACCGCGATTTCAGCTTTCCAGTGCTATAACACTGTG GACATGGGCTAGGCGGCAGATTGGTAAATTCCCAGAATGTTTTTGCAACA TTTCAAAATTTGTCTGCTGCGGACGGAAAAAAGTTGCAACTCTTGATGAA CAAATGTTTCTGGAAATAATAAAACATATTTGAAAGCTGAAACTTTGTAT ATTTATCAGAAAAAGGGTGTTGAGGAATTTAAAAAATCACATCAGCTAAT TCTGGTTCTTTCATTTTCATGTAATTTTATCACTTTGTTGCTTCTCTAGC ATAGGAATGTCCCTAAAAAAAGTATTTATTTCTGCTGATGTGGATTTTAT TTTTATTTTCAGGTGATGCCAAAAGTGCATTAATGTTTACACATCTGAAA TAAAAATTAAAAAACTGTCCACTTTGCTTGTGCGAGAAATTCGAAATTGC CAATTATCCAGGCAAAGACTTACTAAATAAAATAAATGGACTGAAATTGT TGCAAACTGTCAACATCGATATTAACATTTATTCGATAAAAACATACTGG CCTTTGTCAAAAGATCTTTCATAGTATTAAGAAAATAAAAATGTTTTGCC TAAGATTCCCTTTCCCACACTAAGATTCTCCAGAAATTTCCGGGATTTTT TTGCTATTTTTCCTGCCACGAGGTTGGAAAAAGTTTTCTTCTAAATAAAG GTGGGGAAAATCTTGTGTTTATTTACGAAACAGTCACTTTCCAAAGCTCT TGTTTCAACTACCTGGAGCTCTGGTCTTTTTCCGGTAGAAGAGTGACAGT TGATATTCAATGTACTTGAATGGGATAATTTTTTTTTGAACCTACCTCCG GGTACCCCGGTGGAGGTTCTATAAATTAACCCATGTCCGTCCGTTCGTCC GTCCGTCCGTCTGTTACTAGCTTTTCTCAGGATTGGCTCATTAGTTTTTT CTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAGAACGTGACGGA GCCCGATTTTTGAGAAAAAAATTATTTGGGCAAATTTGGGCCAAAAACCT CCCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTT TTTCTGATTTTTTGTACAAAGATGGAGGGCAAAATTCTCTAAAGAATGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGATTTTCGAAAGAAAATATATTTGGGCAAATTTGGGCCAAAA ACTGCCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTAT TTTTTTCTTATTTTTTGTACAAAGATAGAGGGCAAGATTCTCTAAAGAAT GGCTGAAGTGTTTTTTCCCGGAAAATTCTTATTCGCCTTAAAAAACGGAT TTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTT TCTCAAAGTTGACTCATTACTTTTTTCTGATTTTTTGCACAATGATGCAA AATGGCAATGCCTAAAATGTGACGGAGCCTGATTTTCGAAAAAATATATA TTTCGGCAAATTTGGGCCAAAAACTGCCCAAAAATAGGGATTTTGGGCCT GAATGGTTTAAGTGATTTTCGTATTTGGGGAAATTCCATTTTACTATTTT ACATTATTCAACACACAAGCTTTATTTTTCCATTCTGAATTTTTGTACAA TTATTGTCACTTTTTTCTTATTTTCATCTGATGTTAATCATTAGGTAGGT CCATTCAGCATGTTGCTTGTTTGTTTTTTTTTAATGGGATAAATTTTCTC CTGAATTAAATTTTGCAGATTTTTTGATTTTGTTCTCAACCCATGAAATT AAGTCCCAATGGAAATTGGAAAGGTGCTTTCTGTGAAGAATTTTCTATCT ATTAAAACTCAAAAAAAATGTCAAATAACTAATTTTAAAATGTTTACTGG TATCAAAGAAGCGCTAATAATGCCTATTTCAACAATCAACATGCACAATT TGACAGTTTTTCTGCAGATATAAGTGTAATTAGACATCATGCCTGACACT CCGGCTACATAAACATAGAAATGTTCTACACAACCGTGCATTGATGATTG TAGGATGATTGTGTACCAATTCTCCCTTAAAACTCAACTTAACTTGTAAG CAAATGTGTTGTTGTTTGTGATTGAGTCAAACTGGAAAGTGAAAACTGAC AATGAAGGGCGAGGCTTTTGGAACTTGTTTGCGCAATAACACTTGCTCAA ATTCGTTTGAATTCAATCAAAGTCAATAATAACCAGTTAAAGGTTATTGT TTATTCAAACAAATCTGTTTGAAAGTTTACAATTCTATTTGAAAACAACT TTGGTCGTCATGTCTTTAGGCTAGCGCTCCTTTAAATCTTGAAAAGATTA AAAATGTTTCAAAAATCTTTTCAGAATGTGAAATTCCTTTTTTTCCATTT TTCAGATGACAGTTAAAACTACAATGGCTGGTATATCACTATCAAATTTA CAAGGTGCATTGAATGAGATTGGCTTAACTGAAAAAGAGTTGTACATTGG TGGTTTATTAGCCGAGTTATTAGTTCACCATGAGATATTGAGTGTCTCTT TTATTAACAGTCAATTGAATGGCAAGAAAAAAGGATTCTCTATCACTTTT GATTTCTTGAGAAAAACCAAGTTTGAGTTGGCTGTCATCGGGTGTGATTT AAAGATCATGAGAATGAACCCAAATTATGTTGAAGATGAAAGATTTGTTG GGTTTAGTAAAAGTGACGATTTTTATAATCAGCTTTTCCAAATCATACAG AAAGATAATCAAGCTTATGTCCAGTTGAAGAGAAAGCTCATCAACGAAGA CAATAACAATACCGCTAGACTGGATGATGTTTTTACATGGTCTTCTAACA AGTTTAAATTTAACGTCCCGTTTTTATTGAGAAACAGTCACAAGTTTGAA ATATTTATGGACGAGGATGTATCTTATGTAAGGCTGGCCGAAGTTCATCA GATGGCAATGCGCATTGAATTTGGTCAAGATCAAATTAATGAAATCATTC AAAGTGATAAGAGAAAATTAGTGGTTGAATGTCTGAAAAGGTTGCTGGCA AAGTTAGATCATCCTGTAAACCAGGGCACCTTTCAAGCTTGTATTGATTA CGGCTTCCCACCTATTGATAAACTGTTTATGCAATGCAATGGTCACCTGT TTGTCTTTGGTGGAGCTGACAGAAAGATTGCACTAAAGGGAAGTAAAGCT GCAAGAGAAATTCTCAAGTCGTCCCATGCTAGTCCCCCACAAGGTTATAA ATCTGAACCAAAGAAATATAGCACATTTACTACAGCACCACATACAACAA CACCGGCACCTAAACAGAATCTGGCTTCGACCTCACCAATACCAAACAAC ACTATTCCTCAATTGCCAACTACTGCAATACAACAGTTGTCAAGCACTGG AAAATCAATTTTATCAGCTTCTCTTCTATCAGATGTGGAAAAAGCTTACC AGAAAGGCCAAACTGTTGTTGTGGTAGGAAAAGATTCAACACTACCAGTA GTATTTCTTACTGAGAATACTTCAAATGTTACCAATTTGGAAATGTTAGT TGGACTCAAATCTCAATTGGAATCAGAGATCCATAGAAGAACTTTTGCAA AATAAAAGATTTTGGTATAATGAACTTTTTACTGTTTTTTAAAAATTCAG ATTTTACAAATGTAATTTTTCATTATCTATTCTTGTATGATACTTTATAT GAATATTGTATATTATAAAACCTAGACCTGTACCTGGAAATTAAGATCTT ACTCCCTTATAACCTGCAATGACATTTTTTTCTTGGATGAAATTTCTAAA GCATAGCTTTATAAAAATTCACTATTTTTTGTAAGTGTCTCCAAAGCTTG CTCTTATCAACTTGTTTTCTTCCATTACAGTTCGCCTTTTTGTAACCTTT ATTAAAAAGCAAATTTCTTAAAGCCTGTTGAATGCCTCCAGGGTCTAGGT TCAGGTTTTGCTTTTATAGTATGCCATCTATTTTATCAAATTTTGATTAT TATTTAGACATTTTATTTAACGAAACTTAGAAAATTTAGAATTTTAAGCA CTGTTTTGGATTTTCAAATTTACCAAAATAAAATTAGTGAGATATTTCTC TTATAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004681TCONS_00004681Clytia hemisphaericatranscript
TCONS_00004680TCONS_00004680Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004680-proteinTCONS_00004680-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000047supercontigsc0000047:328482..336987 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.53 11.79 2.4 1.39 7.53 6.08 5.19 5.05 3.08 3.89 5.79 3.14 3.27 3.32 4.25 3.89 4.84 4.77 2.9 2.8 6.5 6.02 26.72 26.2 5.13 6.3 5.45 4.51 15.99 18.61