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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004064 ID=TCONS_00004064|Name=TCONS_00004064|organism=Clytia hemisphaerica|type=transcript|length=902bp
ATTTAGTTACCAGGCATCTCCAGGTTCACACGAGGAAAGCAGtcgaaaaa
aatgtcaaatgaaGATAGCACgattgagaaaaacttaaaattacCTGTCA
AGAAATATCACAAGACTTTTGATCACAATGGAATTCCTTTTGTTATGAGA
TGGAGTATAGATGATGTGGCCGAATGGGTGACTTCTGAACTCAAATTTCC
TCAGTATAAAGATTGCTTTCGAAATAATTATGTGAGTGGTAAAAGATTAG
TCCAGATGACTGCATCAAATTTACCTCGGATGGGAATTACTGATTTTGAA
CATATTAAGAAAATCACTTACGAAATTCGTCAACTCTTGGGGATCGAAGA
ACCAAATTGGAATCGATCCATAACACTTCCTCCTAAAGATACCGTTGAAC
ATTATCTTGAACGGAAATCCGTTTCCGGAAGAAACACTGACGGTTTGACT
TTTGAGGAACATGTCCGGTATTtagaagaatttaaaaaacatgGCGTTCC
TGAGGAAGAAAAACATCATTGGACAGAAACGGCAGAGGCCAGAAAGAAAG
TTTTGTGATCACCAGGGTCGATTATGGAGGTTTAGAACGGATTAAATGAT
GATTTGAAGAGATTCGTTCGCTTTGGTAAAGGTGAGGCTTTCTTTGACAT
AGTTTGGTTTTAAGAATCATTTATACATGCTCATTGTTGCCGTCGtagtt
tcattttatttataCACTAAAtattgaatctttttgaaacaaTGTCAATT
CTAGTCGAAGCTTAAAAGAAATCTGCATTTCTTTTGTTAAGGGTAATGTT
TTAATGACAAATTCATTGAAGatggttttttgagattttatatCGAGGGT
TTACCTTCCTTTTCAAAATTATGTAGTGTGTCAACAAATAGATACAGTTg
ag Run BLAST on NCBI protein sequence of TCONS_00004064-protein >TCONS_00004064-protein ID=TCONS_00004064-protein|Name=TCONS_00004064-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
MSNEDSTIEKNLKLPVKKYHKTFDHNGIPFVMRWSIDDVAEWVTSELKFP
QYKDCFRNNYVSGKRLVQMTASNLPRMGITDFEHIKKITYEIRQLLGIEE
PNWNRSITLPPKDTVEHYLERKSVSGRNTDGLTFEEHVRYLEEFKKHGVP
EEEKHHWTETAEARKKVL Run BLAST on NCBI transcript from alignment at sc0000039:705944..719539+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004064 ID=TCONS_00004064|Name=TCONS_00004064|organism=Clytia hemisphaerica|type=transcript|length=13596bp|location=Sequence derived from alignment at sc0000039:705944..719539+ (Clytia hemisphaerica)
ATTTAGTTACCAGGCATCTCCAGGTTCACACGAGGAAAGCAGGTAGGTTG
ATCTTTTTCGTCTCCTTGTCTGCCTGTGTCTGCcttctaaattttctaaa
tattatAAATTTATTCTACTACTAatagtctaaacttaaactcttATATC
AGGATagactaggctagtcttacctcttttatctcttcctttacaacaat
acaatgctgacaagttgacacaacacacgTGTACATGTTATGCAGCCAGG
AAACGCTGTCTAACCATTTTCTGAGTATACTCAGGAATTCGAGATTTTTG
AGATTTCCGCAGTGAAGCGATAGACAGGTTTCCGGTCTAGTGTACATGTG
CATTGACAAGTACCGTAAGTTGgcctaatgtcgacatccgtcttctatat
aatttcgacatccttctttagagataggaataataagaaggttgaaatca
ctgatagactgaagatttttcctctcgccgcgctaatcaaagtcaatcag
caaTTTCGACCTTCCTCtatgttcctatctctaaagaaaggtgtcgaaat
tagaagacggatgtcaacattagaccaacttacggtaatccCTGCTCCCT
TGCAGTTGTTTattaaatttccaccaatgaggttgccgcgGCGTTTCgaa
cggcccttctttttggcacccgtggcctttcagtgccttgcacgacgggc
ggctgtaaaattccacccttcatatatatgtttgtttcaatccgtgatcc
gtggCTTGNagtgccttgcacgacgggcggctgtaaaattccacccttca
tatatatgtttgtttcaatccgtgatctgtggcttaggttttttctcatc
ttcaatttactgaagaaagtgggaatttgatgcaatagttagattaaaaa
atcattgaataaaagaagaacttaaaatcttaaatatttctattttgaag
aataggtgcaaaaaagaacatagaaaagtttcatttttcattgcattaag
gCGTAGATCACAAATAAGTTGTTTTCGCGTcgtccgaccgactcactttc
tatcttaaaaatcTGACACTTTTCAGTCGGAAAGTCGTAAATCTATCGGA
TTGTTTACCAatattttcaaagcattttGTACATTCATCGTTAACGTTAG
TCGCCGATTGGATCATCCAGTGGTAGTTCAAAGAAGCTTTCCGtccgtaa
tttttcaaagattgtttgcgTTAAAAAGCGCTATGCGACTGTTTATTGCA
ACCGTGATATGTAACAAAGATCATAATGCAGCTCGTGCGCTTGAAAATTC
TTGCCGCGCGAACAAACCTATGTTCATGGCGCATTTTTCCGATGATTCTA
GTGCTGACCGACTGCCTAGGTTCAGAGTGCACTTTTCCAACGATTTTAGT
GCCGggcgaccgaccgactcacttttttgggctggaaatgacgcgaacac
aacttataTGTGATTGACGCCTAAtggaaatgggggatttggaaaatttt
ctatgtttagttttttgcacaaacccctgtaactatgggcgggTACCcgg
ttgctaagatgttggcttgaaatcgaaaaagaaaccactcaaaacgaaag
taaaattgcCCCGTACtcaaaatcccgtaatcttgatatgtgagtttaag
tctatactgactAAATCAATGTTTAAATGAATTTTAGCTATTGGTGTTAA
AATTGACATTCAATCTTTCAATGAAAGATGGTTATTCGTGTCTGACGACA
GTAGTAAAATCTATACTATTATAATATATAGCATAGCTCTGACCCACAGT
TTTGGTGGTGGTGGTATTATTGCTATTGGTATATGGCCCAAACATACCCC
AAACATTTTAGGGTCATTTAGGCTAAAAAAGCTACGCATTTTTTGGCCAA
AACATGAGTGATCAGGCCAAATTCAGGCCACAAAGTCTTGGATACCTAGT
TGTTTGGGAGAGCATGCTgtctttttttaacattatgtTGCTTTTACAAC
TCAGGTCTCGTTGTTGCCTAGGGACAAGATAACTTAACCCGTTTGTACTG
GCTAAGGGGAAAAGTAACCAACTCATAAAGGACTATTTTCCCCTTTGAAA
ACCTGGCCGAACATGTGCGGGTCAGTTCTGGACAATTTAAAGTAGTTTGA
AATTGAAGTTCAGGCTAcatcgtcaactgctctaacttgggactacagtg
ctgcaaataaggaaatttcatTTGACCGGTAATTTTTTGAGTGCCACGAA
AATAATTTGAGCAGGGGGTCTGAGCAGGGGGTCTGGCAGAACCCCATTAG
AAAAGTCTGAAATGACCTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNttaaccggacaaaatgaaagATTGAGCTTCAGATTGG
CCGGTAGAAACTACgaaatgaccggtaattaccggtcaccggccgttatt
tgcagcactggactatgtgacaaaacatgggacggcaatttggccaccat
ttcaccgaaagtcatttgatttgagttaatgaacggcgtattaaaaaata
cacgatttctctttcgtatataccgagtaggcttttaaatcgaaatatga
aaataatctgtaatggaacacacgcgaatgtctggaacgaagaagaccaa
attagtggcaaaaagATAGAGCGCTTGATGTCACTCtcacggcaagttac
acactcgttatttgttaatcccatcgggtgaTAGgagggcgttctctaat
tctccaatcagcgtccgaccattttgaatgaaaacaaaaaagttaaaaag
ggtgcgCTACCGGTGAAatttatcgtgacatgttatgacagaaagtatga
ttgatagaCTTGGTGGAGtcttcaaaacaaatttgttgtcaaagagattt
aacataagtgaaaatacagtccagatatcaacagtcccatgtttcgacca
atcatcCCATGTTAGATGTTGTTGTTCAACAGAGGGATTATCTTACTCAA
GATAGTAagattcagggggtacctattttcttagggggtacctaaacccc
tggtccatgccatgcCTAGAGATCCCCAGAaatccaaaattggccgaacc
cccctgggggtactgattcgcactacaggcaaaaattggaaaaaatggcc
ttttcaggcctgtaaatttgtcaaaactatttcaaatctcatttttttca
tttgctgtactaaattttatgaagaaacaacaaaataatcatattgggtt
gaaaattgtgcccattggaaccctaaacgagccgttttaagccaattttg
ggtagcaaaatgctttttaaggccaattttgcaagttcataaacatACCC
AAATGCCaaacccagatgactttgagtTTCCTGCaatatttccagaatac
tatcactgtgagaaaattcgggcccatgtctattgtcattttagagattt
tttcagtccaaatttgggtttttgcctgaaaaatggctcttagcagggat
tttatttccaaaatggcggacatagacgcatcccagacccaaatgatttt
gattttcctggagtatctccaggatactcactgcaaaaaaaatttcagtc
agcatttaaactgagtttgtagaagcttgccttaaaaaatgctatttttt
gattaatataattttttgttgctaaaaagcgatttttgaaaacgccatta
tgaatttttgaaaaaagtgaaaaacttgaaattcattttgcttaaagact
ttattgaagacttccatctctgaaaatttcagacacgtgaattaatcagt
ttaaagtttatgaacttgcaaaattggccttaaaaagcattttgcttccc
aaaattggcttaaacagctcgtttagggttccaatgggcacaagtttttt
cataaaatttagtacagcaaatgaacaagataagatttgaaatagttttg
acatatttacaggcctgaaaagtccagaaaatgccattttttccaatttt
tgcctgtagtgcgaatcagtacccccagggtggttcggccaattttggac
ttctgaccttaaaaattgtgcaGAATGCCTCataataggttaaattttca
taaaaaaacactacatcttgaattttttgattttgcccCAAAAATGGCTG
TTGACGTCCTACCCTAATGTTAACAGATTCTGGCCGGACAAATCTTGTAT
TGATTGACATGTGTGATCCAGTATTGTACATCATGTTGTACATCGTGTTG
TAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAGT
GTTGTACATCGTGTTGTAACATAACGTAACGAAACATAAGTGTGTGTGTC
TTGAATCTGAGACCAAATCAATCTCAAAAGTGTTTCTGCATCAATAACAC
AATGTCAACAGAAGTTTAATGTTCAATACCAACAATATTTACACTATGTA
CATTTGGCGGGTCTTCTTATTGACTTGGAAGGCCAGCTTCACCAGCCAAA
ACTTTCATCAATAAGGAAGCAGATGCTGTCGATTTTGTTGAGCAATCTGC
CAGTTGTTTTGAGGCAGGAACCCATTCAATCGTAATGAGTTTGCCTTGAA
TCATTTCTCGTAAACAGCAAAGGTCAATCATAAGACCTTTATCTTCAACA
ACTGTAGATGTGTGAGCAGTGTCTCTCAATGATTTACTGTCTGTTATACA
AACAGTCGGAAATGTTGATTGTTCTGAATCATAAATCTCACAGAGTAGTG
CTTTAATTAATGTTGCGTGTTCTACTGCTTCCTGTAGTGCAAGAGTCTCG
GCAGCAAGTGGACTTTTCACAACACGTTTTACTTTCTTTGAAGTCCAGAC
AATTGGCGCAGAGTTTCCATTTTCACCTTTAATGAGTCTCAAGGAGGTTT
CATTATACCTCCTTGAGACTTAAATCCTGGAAGATTGGCGTGTGATGCGT
CACTATAAGCATACAACGTTGACTTTTTAACATCACCAATATTAGGTAAG
TTGATCTGAGCAGTTGAATTTTGAAGCTTTCGAAGATACTTGTTCGCTAA
CCGTATGTCATCTGTTGTACCATCTTTAACACGATTACTTAAATCACACG
ACGCAAAAGCTAAATCAGGGCGTGTTTGTTTTGACACCCATTGTATTTGT
CCAATTAAAGCTTTCAGTTGTAACTCTTGAGTAAGATTACGTTTTGATGT
ATCTTTCAATTCAATAGGTTGAAGTGTCTTAATGTAGTCATTTTGGTGCA
TTGCTACAAACTCTCCTGTCTGGTTGATGTCCAATCCTAGGTACTGGAAA
GTTGAAAACGATTCTTTGCTTAAATCAAATGATTTCTGTACATGTGATAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTT
CCTCAGCAGCTTTAAGATACCACGAGCGAGGGGCATCATTTAAACCGTAA
ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCGAGACGAAGGTTTTCCTTACAGATAGTTGG
GGAATCAGTACGAACTTCAGTATTGATTTCCTCAAAACCACGAGCGACTA
ACCTTGCTTTCACGGTGTAGGTGTCCTTGTCAGATTTCTCGGTAATAACC
CATCTGGTCGATACTGTCTCTTGACCTTCATTGTCAACCTCTTCACGGTC
CATTTCTCTACTTTTTATTTAGCTGCTAATACTTGAGGGTTGTTACTGGA
ACTGTAAAGGACTTCTTCTTCAACTGGCTGCCattgaatatttaaaaaat
caacgCACTTAATAACACCCGACACTAAATATTTAACATTAAACCAATGT
TTATTCTTGCAATTAGCTTTTCCAGCACGATTAACAGCGATAAACTTTTC
TTCCTTATTGGTATCTGGGTCAATGAACAAAATTTGTTGTCCAATACGAG
GAAGCTGAATTTGTTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGTCAGGTTTAGTAAGCTTAGGTTCTGCGATCGGGTTTTCAAC
TGGAATCATAACTGTTTCATTACTAACAATATCGATGTCTAATAGCTCTG
GAATGGGTTCATCTTCATCTGGTACGATAAGTATTTCCTTTGGTAATGAT
CCCGACTTTTCCTTATTTGCTTTCGTCAAATGGCATGGACTTACTCGTAG
AACACTTCCTCCGTGACGCACAACAACAACTTTTCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGCTTGGATAAATGCCCTTCTAGCAGAGTGAAG
AGCATTCAAATGTTCAGCAACAAATTCACTTGACGTTTTCGTTCGAAGGG
CTGGTAACTGAGATGTTAACGTGAACGGAAGATTTGGGTTACGGCCGAAG
ACTAGTTGATTAGGACTGTATCCCAAGTTGTTGGACAAAGCACTTTTCGC
ACTTACAGCCCAAACAAGTGCACTCTGTATGGAGCACTGAGTATCAGCAA
CAATTTTTTGGATCATGTTTCCTAGAGTAGCATTATGTCTCTCGACTACC
CCATTTGACCATGGTGATTCAGTAGCTGTTGAAGCTATCGATACATCTAA
AAGTTCTGCTACGTCACGAAGCAGTTCATTGTTAAACTCTCCTCCTTTGT
CAGCAAAGATTGATTGTGGTGAACCGAAAATAGCAACCCAGTGTTTCAAG
ATTTCGTCAACTATCACCTCCTTGTGTTTAGATTTGATGACGGACGCCGC
AGAGTAGCGAGTAAACAAATCGATCATATGAAAAACAATGTACTTTTTAT
CGTTAATTGTGATGAACTTtaaatccattgcaaggcaaCCATTAAATTCT
TTAGAAAGCGATAACGATACGACAGGTCTAGCTCTGGCTTTTCGGTAACG
GGTACAAACGTCACATTCCTCTGTAACTTGATCGATAAGTCCTAACAACT
CGTCATCTTTGATTTCTGCATCTTTTACGATAGTTTTCAGTTTTGCGGAA
TCAACAGGATGTCCAAACTGTTTATGCAGCTTAACAGCAATAGACTTTTT
CTCCTCTTTCGACTTTGTGTTTAAATCATTTATTGTAAGATATAACTCAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTGCTTTGGCGAAATAGGAATACAATAATGTCCGCTT
GAAGTGTGTTGAAGTTTTATCTCTGTACCGAAAAGAGTTATCGTGTCTTT
AACAAAATCAAGTTGTCCACGGGTTCCTTTATACTATGCTTAGAAAGTAA
GAGAGGTACCTCACAGTCGACTACATCTGTAAGGATATGCCCTGGTTTTC
CACCGATGTTAATAGGAATGTTTACTTTCTTCAATGATTGATAAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCGCATACATTTGAAGGGCA
CCCTGGATCAATAACTGCACAACTTAATGTTTCTGATACCATCTGCTCAA
GAAAACATAACTCGACtccactttcttgcctaaataACTGGATTTTCAAA
TGTTGTAATGATAAGTCCTTTTTATCTGCATCCGGACAGTCACGGTAGTA
ATGATGATTGAACCACAAATTTTACAACGAGTAGGGTTACCATTTTCATT
TGGACAGTTTCTATAACGAGTTGATGACTGTGCTTGAGGAGCGCGACTGT
CCTCTTGACGGGATCCTCGATAGTTAGCTCCTCCACGTCCATGATATCGT
ATCGATTAACTCGAAAATTTCGTCCTCGATTAGCAGAATAATTGTTACGG
GAATAATATGCTTGTTCATTTTCAACTAAAATATCTGATGTATCTTCAGT
CGTTTTAACATCAGTCGTACACGAATCGTAAATAGCTTTAATCTGCCGTT
TCATATCATCATACTTCAGTTCTGCAATAGTGGCTCTGGCTAAATCACGT
TTACTTTTTGGTAAATTAGCATTTTTCAACAATTGATAAGCTAGTACTGG
CGATGGTAACTCAATCTTATAAGTTTTCAGTTTATGATTGAGTTGTTCAA
ACTGATTGATATATTCTGCGATANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTG
GCGAACCTTTGGGGATAAACTGAGATACAACACAGGTCCCTGTTTTGTTT
TAGCTAAATCAGTTACTAACTGCcacatttcaatttcatgtaACCAATGT
TAAAAGTCTCGGAGTAACTCCATCTTCGGAGAACGGGGGCAATTTATACT
TTTGCCCTATCGAAACAACACCTGCCATTTTCAACAATTAACCACTTTAG
TTTATACTTTTATAACAACcaaagttcataaactttatcACACTTTAGTA
ACCAACCAATAATATCTTTACTGCAAAACCACCGAATGCTGCTACCATGT
AAATTGGTTGGACATCTCAACCAACAGGAtcacttctttatttaattatt
cCACTAAAAGAACAATGCTAACAGAACCAACCTTGTAGtttaatcccggg
attgaaaaaacctaGAGAAAATCTTTTCCATACATGATATAATATGTAGC
tgaggaattttaaaacaaggcATCCTAAGTGAAACAATTGATGGTGGAGA
AGTTGTGATTgaaggtttttgtaattagacagcgTGACATAGGTTTGTTT
TtggcataacaaagacaaacacaggaggtaaggtaaactGCGTTTTGACt
tcttttgaccatttttctaatacaaaataatttcaaacttgacttcactg
aatTTACTCTGTTTATACTGGCTGAGAGAAAGTAATGTATGCTGGAGTAA
TTTGATACTCAATAGACCATCGCGTTCTTCTATTAAACGACTATtcttat
ctctaaagaagggtgttggaattagaccagactctcccactcgatacaat
tgattcatttttcaatcaatgACCAATCGATAACCAAGGGATTTTGTGCT
ATATCTGATACACAAATAAGTGATATAATTCGCAATAGGAAAGTTCCAAA
TTTTCAGTATAGTTGTTACAATTTTACCCTATTTTGCaatattagaaata
tttttcgcTATTTCAAAAATAGCCAAATTCTGCCTCATAATTTTAAACCT
GTTTTAAAAATTtgctttattttatttcattttaaattgttttttatacT
GATTTGCTTTTACTagctttatcaaattttttatttagaggGAGAATTTG
GGCTTCTTAagtaaaataattgttaaattgtgaaCAAATTGCATTCTTCA
TTATGGGAAAACAAATTTCTGTACGTTTattactcttgggtacctaatag
ctggggggggggttggaataaaaatgtcctgggtggaaaatttgcTAATA
TAGCAGAGGTAACGCAAAagaggaaactttcaaaaacattttctcaaaaa
ttaataagcagggagattggaataagaatgtcctgcaTGGGAAATTTTCG
AATAATTAATAATCGGAGAGACGACTATTAGGTATACCCAAGAGTAGTCT
GGAAGTATGNtcaatgtttcttaagaaatcggccttttgagccttaaatg
tttcttacatgtttctaaactttgtcaagtttaaaggacgcatgtcgata
atacaatagtctaataAACTAATCTAaggtactttcctatcttctatatt
gattttctgactgttatgtaagtatttttctggAACTTCGCCTTGATTgg
aagtttcttaaaaaaacgaattaaaaaatttattttctcattctcagcct
cagcatgtttcttagatgtttcttagtttttaggcattctgagcctcgtt
tttcttaaaagtgtttcttaaaaaaaaaaaaaacgtgtatgttgaCATTA
ACTTATATGAAAAAAGTGTTCATACTCCCAAAAACCTTCAGATCTTTtct
tatttcaaaaatgaaagatcTGTGAATAATAAAGGATCCTGGTTTTTCCC
TCGCTAAATATTACCTTATTTTCGTtcttttaaagtcgaaaaaaatgtca
aatgaaGATAGCACgattgagaaaaacttaaaattacCTGTCAAGAAATA
TCACAAGACTTTTGATCACAATGGAATTCCTTTTGTTATGAGATGGAGTA
TAGATGATGTGGCCGAATGGGTGACTTCTGAACTCAAATTTCCTCAGTAT
AAAGTAAGTCATTTGTTTGTATTCAGAATCAGTAAATTTAAGCCTCAATT
TCTCCTTTTGCAAGTCCATTCCTCCTCGTAAGGAATAAGAGGCAAACAAT
CTTCTTTCTTACTTTTCGGAATTTCCCAGGATGTTGCAAATACACTTTTA
CTTTATTTCTGATAGGCTTTGAAGACCAGCATTTCCTTGGCCATGTCAAT
GGGATCATCATTCTTTTAGAACGTGGTTCTTAGGTATTTGTGAGAAATCT
CAATAAAAATAATGTATCCTTCTTGAGAAATTACTACCCAATAAATAGTC
AAAGTATTTATTAACTTCACTTGCTTTCACCATTGATTCCAGGATTGCTT
TCGAAATAATTATGTGAGTGGTAAAAGATTAGTCCAGATGACTGCATCAA
ATTTACCTCGGATGGGAATTACTGATTTTGAACATATTAAGGTAATTGAA
CCAACTTTCAATTGATACACCACTGGGACCTTACTCCCACTAgaatattt
ggcaaaaatttcgtccccagtgAGACAATACCCTGgagtttcagccccac
tgggatatcaactttgatttcatccccattcgaaattcaatgtctcACTC
CAAAACCATGCCTACTGAATTGTTtcaccttggaacaatagaattgctat
tctcattgggatttcaatataaattttGATCCCCACGGAGAAAAGAAGTT
CCACcagggttgtgagacaggggtgtattgacGGCGTTCTCATGCTGGTA
GatcattctttatttttatgTAGCCCGCTTaaactttcttccaaatttCT
TGAACACTTTGTAAAATCCTATTTAATTGTCTGGACACCAAGTTGGCCAT
CATATCTTCCAAATTTCTTGAACACTGAGTAATCCTATTTATTTTTCTGG
ACACCAAATAAGCCATCTATGCATATTGGGGTCATTCTACAACCAGGAGT
GATTTTAATCCTCCCTTACCCTTTCTTGTGCTAACAAAGAGGTTTAGTGA
GATTATCGCCTACTTTTGTTATCATTTGGGCAAGTTATCACAGAAACTTT
TTTAGCCAGTTTTGGCATGGTGCATCATTGTATCTTCTTGTTGACAGTGT
CCTATTAGTGTGACATGTCCAATTGGAATTAGTTGCAATTCAGGTATCTA
TGATtgagaaattttaaaaacattttttttttttgctttttcttcaaACA
TATTTCCTAGGTATTAAAGGcattataatataatatatatatttttatat
cagAAAATCACTTACGAAATTCGTCAACTCTTGGGGATCGAAGAACCAAA
TTGGAATCGATCCATAACACTTCCTCCTAAAGATACCGTTGAACATTATC
TTGAACGGAAATCCGTTTCCGGAAGAAACACTGACGGTTTGACTTTTGAG
GAACATGTCCGGTATTtagaagaatttaaaaaacatgGCGTTCCTGAGGA
AGAAAAACATCATTGGACAGAAACGGCAGAGGCCAGAAAGAAAGTTTTGT
GATCACCAGGGTCGATTATGGAGGTTTAGAACGGATTAAATGATGATTTG
AAGAGATTCGTTCGCTTTGGTAAAGGTGAGGCTTTCTTTGACATAGTTTG
GTTTTAAGAATCATTTATACATGCTCATTGTTGCCGTCGtagtttcattt
tatttataCACTAAAtattgaatctttttgaaacaaTGTCAATTCTAGTC
GAAGCTTAAAAGAAATCTGCATTTCTTTTGTTAAGGGTAATGTTTTAATG
ACAAATTCATTGAAGatggttttttgagattttatatCGAGGGTTTACCT
TCCTTTTCAAAATTATGTAGTGTGTCAACAAATAGATACAGTTgag Coding sequence (CDS) from alignment at sc0000039:705944..719539+ >TCONS_00004064 ID=TCONS_00004064|Name=TCONS_00004064|organism=Clytia hemisphaerica|type=CDS|length=1521bp|location=Sequence derived from alignment at sc0000039:705944..719539+ (Clytia hemisphaerica)
atgtcaaatgaaGATAGCACgattgagaaaaacttaaaattacCTGTCAA
GAAATATCACAAGACTTTTGATCACAATGGAATTCCTTTTGTTATGAGAT
GGAGTATAGATGATGTGGCCGAATGGGTGACTTCTGAACTCAAATTTCCT
CAGTATAAAGATTGCTTTCGAAATAATTATGTGAGTGGTAAAAGATTAGT
CCAGATGACTGCATCAAATTTACCTCGGATGGGAATTACTGATTTTGAAC
ATATTAAGAAAATCACTTACGAAATTCGTCAACTCTTGGGGATCGAAGAA
CCAAATTGGAATCGATCCATAACACTTCCTCCTAAAGATACCGTTGAACA
TTATCTTGAACGGAAATCCGTTTCCGGAAGAAACACTGACGGTTTGACTT
TTGAGGAACATGTCCGGTATTtagaagaatttaaaaaacatgGCGTTCCT
GAGGAAGAAAAACATCATTGGACAGAAACGGCAGAGGCCAGAAAGAAAGT
TTTGTGAatgtcaaatgaaGATAGCACgattgagaaaaacttaaaattac
CTGTCAAGAAATATCACAAGACTTTTGATCACAATGGAATTCCTTTTGTT
ATGAGATGGAGTATAGATGATGTGGCCGAATGGGTGACTTCTGAACTCAA
ATTTCCTCAGTATAAAGATTGCTTTCGAAATAATTATGTGAGTGGTAAAA
GATTAGTCCAGATGACTGCATCAAATTTACCTCGGATGGGAATTACTGAT
TTTGAACATATTAAGAAAATCACTTACGAAATTCGTCAACTCTTGGGGAT
CGAAGAACCAAATTGGAATCGATCCATAACACTTCCTCCTAAAGATACCG
TTGAACATTATCTTGAACGGAAATCCGTTTCCGGAAGAAACACTGACGGT
TTGACTTTTGAGGAACATGTCCGGTATTtagaagaatttaaaaaacatgG
CGTTCCTGAGGAAGAAAAACATCATTGGACAGAAACGGCAGAGGCCAGAA
AGAAAGTTTTGTGAatgtcaaatgaaGATAGCACgattgagaaaaactta
aaattacCTGTCAAGAAATATCACAAGACTTTTGATCACAATGGAATTCC
TTTTGTTATGAGATGGAGTATAGATGATGTGGCCGAATGGGTGACTTCTG
AACTCAAATTTCCTCAGTATAAAGATTGCTTTCGAAATAATTATGTGAGT
GGTAAAAGATTAGTCCAGATGACTGCATCAAATTTACCTCGGATGGGAAT
TACTGATTTTGAACATATTAAGAAAATCACTTACGAAATTCGTCAACTCT
TGGGGATCGAAGAACCAAATTGGAATCGATCCATAACACTTCCTCCTAAA
GATACCGTTGAACATTATCTTGAACGGAAATCCGTTTCCGGAAGAAACAC
TGACGGTTTGACTTTTGAGGAACATGTCCGGTATTtagaagaatttaaaa
aacatgGCGTTCCTGAGGAAGAAAAACATCATTGGACAGAAACGGCAGAG
GCCAGAAAGAAAGTTTTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004064-exon-sc0000039-1491911889:705944..705985 | TCONS_00004064-exon-sc0000039-1491911889:705944..705985 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1510915933:705944..705985 | TCONS_00004064-exon-sc0000039-1510915933:705944..705985 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1575043694:705944..705985 | TCONS_00004064-exon-sc0000039-1575043694:705944..705985 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1491911889:717529..717696 | TCONS_00004064-exon-sc0000039-1491911889:717529..717696 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1510915933:717529..717696 | TCONS_00004064-exon-sc0000039-1510915933:717529..717696 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1575043694:717529..717696 | TCONS_00004064-exon-sc0000039-1575043694:717529..717696 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1491911889:718036..718134 | TCONS_00004064-exon-sc0000039-1491911889:718036..718134 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1510915933:718036..718134 | TCONS_00004064-exon-sc0000039-1510915933:718036..718134 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1575043694:718036..718134 | TCONS_00004064-exon-sc0000039-1575043694:718036..718134 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1491911889:718947..719539 | TCONS_00004064-exon-sc0000039-1491911889:718947..719539 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1510915933:718947..719539 | TCONS_00004064-exon-sc0000039-1510915933:718947..719539 | Clytia hemisphaerica | exon |
| TCONS_00004064-exon-sc0000039-1575043694:718947..719539 | TCONS_00004064-exon-sc0000039-1575043694:718947..719539 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000039 | supercontig | sc0000039:705944..719539 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00004064 vs. Swiss-Prot (Human)
Match: SAM15 (Sterile alpha motif domain-containing protein 15 OS=Homo sapiens GN=SAMD15 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.360e-28 Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 1
Query: 16 ISRFTRGKQSKKMSNE--DSTIEKNLKLPVKKYHKTFDHNGIPFVMRWSIDDVAEWVTSELKFPQYKDCFRNNYVSGKRLVQMTASNLPRMGITDFEHIKKITYEIRQLLGIEEPNWNRSITLPPKDTVEHYLERKSVSGRNTDGLTFEEHVR 468
+S F K+ +S E + E + P K F+H + W ++VAEW+ S+L FPQYK+CF N++SG++L+ + SNLP+MGIT+FE +K I+ ++LL IEEP + RSI+LP +D + YLE+K +G +D LT E V+
Sbjct: 504 LSEFVHEKEVVDLSQELKERVSEDDETQPEKGTELQFEH------LNWDPEEVAEWI-SQLGFPQYKECFITNFISGRKLIHVNCSNLPQMGITNFEDMKAISRHTQELLEIEEPLFKRSISLPYRDIIGLYLEQKGHTGIKSDSLTLSEFVK 649
The following BLAST results are available for this feature:
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