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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003909 ID=TCONS_00003909|Name=TCONS_00003909|organism=Clytia hemisphaerica|type=transcript|length=3412bp
attttttaatacgtcgttcattaactcaaatcaaatgactttggagattC
GGTgtaatggtggccgaattgccgtcccatgttttgtcagatagtcccaa
gttagagcagttgacgttactattcctatctctaaagaagggtgttgaga
ttagaagagggatgttgacattagaccaagttacggtaaaaTATATTGCC
AGATTTCTAAAAATATGTCCTGGGAACAAAAGAAAGTGCtactttcaatc
tgtcattctgAATGATGCCCGAATCTTTACTTTTCTTGAATAATATAATA
TACAGCAAAGGCGAACAAACATTCTTATATATTTGATTTGTATATTACAG
ACCTGCCAACTCTTGCGCATTGAGCGTGAGTATTTCAACATTGTCtcatg
caatttttgaaaaacttgatttctCATGCACTCACAcattattgattttt
gaaaaaactttctctgatttcccgaattttggcaaaaaagtcTCCCTGAT
TTTccaatttccgaaaaaaattttccctaattttccaattttcggaaaaa
agttttcccccgatttccccgatttcgGAAAATTGGAAAACCGGGCTACA
ATTTCAGATTTGACttggaaatttttatctcatgcAAAATGGACATCTCA
AGTTGGCAGGTCTGACAGGGTCTCATGATATTTGCGCGCCacatttccgg
aaacaagactaTTTCTTTTTATTGGCCTGAGAAAACCATGACCAGACATA
TTAATTAATTGAGGCGTATGCATGTTTCCCTCCAGTGATGCAAGATTTCA
CTCCAGGTAGGATTCAATATCAAACAGGTTGCctttaaacattttaaaac
tatATTGTTTTTTCCCATCCAGATTAAATTAGAATAACatattatttaca
aaaaagaaGAGGAGAGTTTTCTTTAGATCAAATCAATGTGGAGACAAGCT
TGCCCAAATATCCCTAGTATACCAAATCCACGTGGTGCTATTCTCAACTT
TCTTAAAGGAGTTTGGGGTCGAGGTAATTCAACCCTCTCAACAGCCATTT
ACTCAAGCGAGATGAAAGTAAAACTATTACCAGCCCTTCAAGACAATTAC
ATGTACATGATCATTTGTGAGCAATCACGAGAAGCTGCTATTATTGATCC
TGTGGAACCGGAGAAATGCTTGAATGcactaaaagaagaaaatgtcaaat
tgACACACATCCTTACTACTCATCATCATTGGGATCATGCTGGCGGAAAT
GAGGAGATGTGCAAATTGGTCAAAGGACTGACTGTGTGCGGTGGCGATGA
TAGAATTGGTGCTCTCAATAAAAAAGTTGAAGATGGTGATAAACTTAAGA
TCGGTAACCTAGATGTCACGTGTATTTTTACGCCATGTCATACAATGGGT
CATATTTGTTATTTGGTGGAAGGAAATTCAAATGCTCCGGCACTTTTCAC
AGGAGACACATTGTTTGTAGGCGGTTGTGGGCGGTTCTTTGAAGGTACAC
CACACCAAATGCATGAAGCACTCATTGAGAAATTATCAAAACTACCCGAT
CATTGTAATGTTTATTGTGGTCACGAGTATACTGTACAGAATCTACAATA
CGCACTTCATGTTGAGCCAGAAAATAAAGATCTCATTGAGAAAATGGAGT
GGGCAAagGGTCGCAGAGAAAGAAATCTTCCAACAATACCATCTTCTTTA
AACGAAGAGAAGTTATACAATCCTTTCATGCGAACTAGTCAACCAGCTGT
TCAACAACACGTCCAATTGACGGATCCAATCGAAGTGATGGGTGCtatta
gaaaagaaaaagatactTTTAAACCCAAATAAAGATGATATGGTTAAGGC
TATGGTGTTATTGTTCATTCAAGAAAACGTTTTAGAGGATGAAAATGACT
TGAGATCAAAAGCGACTCTTGAATCAAACACCTTGTCAATTCCTGGGAAT
TAGTTGACAAGTTCAATGAATCTAGAAGATGTGTGATGTTTATTCGAAGT
TCACTGGTTAAATGCAACCATGTCGCCAGAAACTCAAGCACATACCCTGT
CTTCGAAATTGTATTTGGACGAAAATGGATGAAAGAAGGTCTAGAAGAAT
TAATGACGTTTAAAGGAATATGCAAAGGAGACTTTTTAACCTACTTTACA
CACATAATTTACACAAGACACAAGCATGAACACATTGAGTGAATCCACGT
TTATAACATAGAACATGTTGCTTACCGTATTTCCTTAAGTAACCGCCGCG
TTGCTCTttagatttttaagattttgggtgcggcaaaattgaaattatct
tAAAGTGATGATGGCCGATTTTTGGCGGAGGATTTAATTTGgggattttt
gccaaaattcgccaaatctgACCCccaccaaaatttatccacttatgTCA
GCTATTTTGCACCCTGGGTGTAAACTATTTTACACCCTGGGTGTAAAGAA
AAGCACAAATTTCACAACCAGCTATGCAGTTTTTGCACTTAAAACTGGTA
TATGCTTTATTTCGATAGCTCCAATCTTCCGTAGCACAAACTCCTTGAAG
TTCAAAGGGATTAGGAATCTATCGAAAAGTCAATGACTTTCTAATAAGtt
ctctcgggtacctaataagcgtccccctgattaatttttcgaaaattttc
ctaccAAGGCATTCTCTTTCCAatccccccctgcttattaatttttggaa
aatgctTTTTGGAAGTTCACTCTTTTGCCCAAATTCTTGCTGTGTTGGCC
tccattttaaaaattttccacccatgacatttttattcatagaaaaacag
ccataacttttgatgcattaatttagaagatttttccgaaaaatttaaaa
cagttcaattctttgcggacagtttgaaaaaacttcgaaacaaaaaagtt
aattacccattaaaacttagcactttttatagaaggaggtgatgcaacat
atcattaacgtctttttaaagttcacaacgtcatttttacaattaaattc
ttaattactcttaagagatttgattaaaaagcaatttataaaggcaattc
tttgtcaaaagtgttaaagaacctaaaaagtaacttttatgttcaaatac
ttaaatcaatttttcgactatggtcagagcccctaagttttgtgattttt
tcaCCAACCCCGATTATTCCAAAAAACCCAATTATTAGGAACCCGAGAGT
ACCGCTTTCTGGGGCACAGCGCGCCTTCTACTAACTTCTTGATTAAGGTA
TGGTGCCTGGCGCTCTAAACATAGGAAATACAGTAATCATATCTTAGATT
CATGAGCTTAAAAGAAACTTGTACGTTAAAAGTTTGATAccaattgaaaa
agaattaaatGGTTGAAAATATATAATCCGTTTTTGTACCCgttaatttt
gacgttcacGAG Run BLAST on NCBI protein sequence of TCONS_00003909-protein >TCONS_00003909-protein ID=TCONS_00003909-protein|Name=TCONS_00003909-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
MWRQACPNIPSIPNPRGAILNFLKGVWGRGNSTLSTAIYSSEMKVKLLPA
LQDNYMYMIICEQSREAAIIDPVEPEKCLNALKEENVKLTHILTTHHHWD
HAGGNEEMCKLVKGLTVCGGDDRIGALNKKVEDGDKLKIGNLDVTCIFTP
CHTMGHICYLVEGNSNAPALFTGDTLFVGGCGRFFEGTPHQMHEALIEKL
SKLPDHCNVYCGHEYTVQNLQYALHVEPENKDLIEKMEWAKGRRERNLPT
IPSSLNEEKLYNPFMRTSQPAVQQHVQLTDPIEVMGAIRKEKDTFKPK Run BLAST on NCBI transcript from alignment at sc0000038:550172..558248+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003909 ID=TCONS_00003909|Name=TCONS_00003909|organism=Clytia hemisphaerica|type=transcript|length=8077bp|location=Sequence derived from alignment at sc0000038:550172..558248+ (Clytia hemisphaerica)
attttttaatacgtcgttcattaactcaaatcaaatgactttggagattC
GGTgtaatggtggccgaattgccgtcccatgttttgtcagatagtcccaa
gttagagcagttgacgttactattcctatctctaaagaagggtgttgaga
ttagaagagggatgttgacattagaccaagttacggtaaaaTATATTGCC
AGATTTCTAAAAATATGTCCTGGGAACAAAAGAAAGTGCtactttcaatc
tgtcattctgAATGATGCCCGAATCTTTACTTTTCTTGAATAATATAATA
TACAGCAAAGGCGAACAAACATTCTTATATATTTGATTTGTATATTACAG
ACCTGCCAACTCTTGCGCATTGAGCGTGAGTATTTCAACATTGTCtcatg
caatttttgaaaaacttgatttctCATGCACTCACAcattattgattttt
gaaaaaactttctctgatttcccgaattttggcaaaaaagtcTCCCTGAT
TTTccaatttccgaaaaaaattttccctaattttccaattttcggaaaaa
agttttcccccgatttccccgatttcgGAAAATTGGAAAACCGGGCTACA
ATTTCAGATTTGACttggaaatttttatctcatgcAAAATGGACATCTCA
AGTTGGCAGGTCTGACAGGGTCTCATGATATTTGCGCGCCacatttccgg
aaacaagactaTTTCTTTTTATTGGCCTGAGAAAACCATGACCAGACATA
TTAATTAATTGAGGCGTATGCATGTTTCCCTCCAGTGATGCAAGATTTCA
CTCCAGGTAGGATTCAATATCAAACAGGTTGCctttaaacattttaaaac
tatATTGTTTTTTCCCATCCAGATTAAATTAGAATAACatattatttaca
aaaaagaaGAGGAGAGTTTTCTTTAGATCAAATCAATGTGGAGACAAGCT
TGCCCAAATATCCCTAGTATACCAAATCCACGTGGTGCTATTCTCAACTT
TCTTAAAGGAGTTTGGGGTATGTTTTTTATATATACTATAAAACTTTAAC
CACCGCAATAATACCTACCTCGATGCCTACTAAATTTTTGAGGTTATTTA
AAGTTTTAATCTAAATTGAACTGAGTTTATATATGTTTTATCATTCGATT
CACTGAATCTAGTCATGGTCATGGCGATTCCTTACATAGACTTATTTTGA
TTAACACAACAGTTGTGTTAATCAAAATAAGTCTATGTAAGGAATCGCCA
CAGTTACTGTGATttattgaaattgttttgatttaataaaCAATCCAGGT
CGAGGTAATTCAACCCTCTCAACAGCCATTTACTCAAGCGAGATGAAAGT
AAAACTATTACCAGCCCTTCAAGACAATTACATGTACATGATCATTTGTG
AGCAATCACGAGAAGCTGCTATTATTGATCCTGTGGAACCGGAGAAATGC
TTGAATGcactaaaagaagaaaatgtcaaattgACACACATCCTTACTAC
TCATCATCATTGGTAAGAAAATTCAgattctttttcttattttaagaTAA
GAGTCTTTTTAAGACTATTGCTTAAAAAGCAACATTTAAAGCTCAGTGGA
AAAATGTTGAACAAACCAAACCCAAGGTTGCTGGTTTTTAGACATTTTTA
GATAAGGCTTTTATTGTTCTAGCTATACAGAgctatattgaaaataaata
tcatTTGAGATTGCTAAGTGAAATTACCAGACCATTACCAAACTGTGTGG
CGAggtagctcagttggtagagcatTCGCTTTATGATCCAAGGGTTGTGG
TTTGATCCCTGGTCACTGCCAACTCAGTGAATAAGAATcatagattgggt
aatctggtCTAACTGTACAATCAtggtgttgaaatattttgaaatattag
tgtattttaacgtttttcaggatttaaagTTTGGACGAGAATTGCTTTTG
CAAtggcacttccactttctttcattcaatatttcgattttggaggggtt
cggtggctttTAGGCTACATTCCACGCCTTATTGGAGCagattttaatct
tttaaatcctgagGTCCTATAAGGTCCCAAGTCTTAAAAGTCTCATGCTA
AAACTcggagttaaaactctacttcccaactgtagtttaatgcgcttaaa
aatcatttgtgatGTTTAAGATTTTGCAGGAAAATCctctttgtctcaaa
tattttgtccatgattgtaggtaAGTCACTAGGAATTTATAGTAGGTGTG
CATTCGACCTCCAAGGTCTAGGGCAGATAGAAAAAGGGGAAGGATTCCAA
CACTCCCAGCCTATCGACAGCCACCAAAAGAATATACTTATTTTACTTTA
CTTAATAATGCTTTAAAAAATACAAGCTGCTTGTCAAAAGTCCCTTCAAC
CTAATACAGATTAACTATCTGCCTGATTCTAAAAAACCTACTTGTTTGCT
TGACAGGGATCATGCTGGCGGAAATGAGGAGATGTGCAAATTGGTCAAAG
GACTGACTGTGTGCGGTGGCGATGATAGAATTGGTGCTCTCAATAAAAAA
GTTGAAGATGGTGATAAACTTAAGGTTAGTATATTCTGCTTTGCACTTAA
TCTCTAAACAATGTAGACAGGAAACTCGTCTCTTTTCAGtgcagaaattt
tgaaaaacactggAATTCCATATTCAGCAGATACAGTTTCTCTCATCACT
ACTTAAGATAGGAGAATTTTAACCAGAGTTTCCCGGCTGAAAATGATAAT
GTTTTGCTGTTGGCATAGCCTACTGTATGTAcgaaattttatttgaattg
aatttaatgatTTAAATTTTCCAAAGCCCCTTCCCCTAGGGCAATAAAAA
TGCATTTCCATACAATAATTATATTCCTTCTATTGAATTTGTTATTTTGG
CAAACCAAATGTGTTTCAACATTTACTATCACGTTATTTAGGTGTTCAGA
CCAAAACAATGAACATGATTACAATTGTTTGTGTTTAGATCGGTAACCTA
GATGTCACGTGTATTTTTACGCCATGTCATACAATGGGTCATATTTGTTA
TTTGGTGGAAGGAAATTCAAATGCTCCGGCACTTTTCACAGGTATATATC
TTAATCATATATAAGACACGATATAATTAATAAGTGTTTTATTTGCATCA
TCTAGTAGTTATTTTTGCTACAAACAATGAGATTACTTTTCAATGCGATG
CTTCAATAACGGTTCAAAACATTACTCTCATTATCCCTATCCTGATTTGA
AGTCGTGAAAGACAAGAGTATAATCCTCGTAATTTATTTTTGGTGCATCT
TCATCTTTAAAACTTGTATGTATTTTGATAATTGATAATAATGATTGTAA
TAATGCATTATTAATATCTAATGACGAAAAAAAGGGCTACATGAATCTAA
TATTTCTCTTATATTTTTAATCATAGGAGACACATTGTTTGTAGGCGGTT
GTGGGCGGTTCTTTGAAGGTACACCACACCAAATGCATGAAGCACTCATT
GAGAAATTATCAAAACTACCCGATCATTGTGTAAGTATAAAATAACTGAG
GTGTGCTATATAGCGTATCAGAAGGTACATAGGGTGGTGACACAAAGCTG
TGTTTAAAATCATAGGATTGTTTTTACAGGATACACATAGCAATAAagct
attttttgagaaatatttcttttttagaaaatttattttcactCATCAGT
ACACTCAGTTTTGAGAGATTTAAGGAATAACTTATAATATCAAACTGTTC
CAGTTAGTGTATTTGGTTAACCGAATGTATTGAATAATTACATAATTTCT
TACCTTCAGAACAAAATGATGTAATTGTTTGAAATTCTTTCagttaaaac
tttaaaaaaagatttaaccCTACAACTCTCTACATTTTCTTACCTTTTGT
CTTTTCTTAGAATGTTTATTGTGGTCACGAGTATACTGTACAGAATCTAC
AATACGCACTTCATGTTGAGCCAGAAAATAAAGATCTCATTGAGAAAATG
GAGTGGGCAAaggtttgaaaatttgatttattcGTTGATCATTATGTGTA
ATTCTTTTATATCAACGTCTATTCGCTTATTGAAGTTATATACCACTGAA
AATAACTTCAAAAATgcagaagaaaataaaaaaaattcatttgatGAAAC
TTTATTTTTGGTATAGAGGTACCTGATTTCAGCTATACAATCGCATCTCT
CTAATTCAATTCCCAAGGGGCTAAATCATTTCTTCGAAtaagagattcga
attatagagagtgttTTGGAGTGCTTTTCGACTAAAGTGACCAACAATGT
TTAgtcgaattaaagaaaaatcCAAATTAAGAGGTTTGGgtattattttt
cattcaaaattattACATAGAAAGTTATAGCTTCCAGAACGTAGCAGAAA
GTGAAACTTTGAAACCTATTCCCAAATACCAAACTACATTACCATATGTA
TTCATAAACATAAaaatttctcttcttttctgttCAGGGTCGCAGAGAAA
GAAATCTTCCAACAATACCATCTTCTTTAAACGAAGAGAAGTTATACAAT
CCTTTCATGCGAACTAGGTATGATGAGTAGTAAACAGTGTACTCtcaggt
gccaaataaacggggggggagAGAGTCCTCGAATAAACGAGATCGGAAGA
GCGGTTCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNcgcacgatgggttattttttcttatttg
gcacgccctcaaagagagcaattaatcgttaattgcatcctgtagagagc
aattaatcgttaatcacactctctaatgcggcgccaatgtttacgaaatt
gattttaatattttttcttacattttttttcgcatcgaacgttttaattg
cattcgaaatttattttgtgagagagaaaatcaataaacaacaacaaaag
aaatacataaagagaagagaaaaatataaaactctcagtgtaatttctgt
aatttactttcctaactgggaaaaagtagtgacagccattgtgcgattag
ctcgtaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGTTtgtttggcacctaagagtaaactCTAAATTGAT
CTATTTTCAACATGATGGTGAGTACTTCAGTTGATGATAATATCTCGACT
GATAACCTAGATAGGCTTGGCCTCATTTAAAGATACTTTCATAAATTGGA
TGACTAGACCGTACCAGTCATTGCAAGAATAATAAGATACTTTCCTTTGA
TCAGAACTGTAAGTAACAAATTCaaaagggaacttattttgacgagaact
aattttgtTGGCGAGTAACGAAAATCTTGAAAGTTTTTAAtattggcgag
aactaattttggcgaattttctCTAAACTCGCTGaattgccaaaattagt
tcttgccAAAATGTGTTCCCTTAAGGATTTACATTAAGGAGGTGTGCAGT
CTTCCCTTATCTCTATCTGGGCTTTGGACAGATTTGGTAACTACCCTTCA
GTATTTCTTTCCTGGTAGATTTTAACAAATTCTGGTCTTTCTTTTTATTG
CAGTCAACCAGCTGTTCAACAACACGTCCAATTGACGGATCCAATCGAAG
TGATGGGTGCtattagaaaagaaaaagatactTTTAAACCCAAATAAAGA
TGATATGGTTAAGGCTATGGTGTTATTGTTCATTCAAGAAAACGTTTTAG
AGGATGAAAATGACTTGAGATCAAAAGCGACTCTTGAATCAAACACCTTG
TCAATTCCTGGGAATTAGTTGACAAGTTCAATGAATCTAGAAGATGTGTG
ATGTTTATTCGAAGTTCACTGGTTAAATGCAACCATGTCGCCAGAAACTC
AAGCACATACCCTGTCTTCGAAATTGTATTTGGACGAAAATGGATGAAAG
AAGGTCTAGAAGAATTAATGACGTTTAAAGGAATATGCAAAGGAGACTTT
TTAACCTACTTTACACACATAATTTACACAAGACACAAGCATGAACACAT
TGAGTGAATCCACGTTTATAACATAGAACATGTTGCTTACCGTATTTCCT
TAAGTAACCGCCGCGTTGCTCTttagatttttaagattttgggtgcggca
aaattgaaattatcttAAAGTGATGATGGCCGATTTTTGGCGGAGGATTT
AATTTGgggatttttgccaaaattcgccaaatctgACCCccaccaaaatt
tatccacttatgTCAGCTATTTTGCACCCTGGGTGTAAACTATTTTACAC
CCTGGGTGTAAAGAAAAGCACAAATTTCACAACCAGCTATGCAGTTTTTG
CACTTAAAACTGGTATATGCTTTATTTCGATAGCTCCAATCTTCCGTAGC
ACAAACTCCTTGAAGTTCAAAGGGATTAGGAATCTATCGAAAAGTCAATG
ACTTTCTAATAAGttctctcgggtacctaataagcgtccccctgattaat
ttttcgaaaattttcctaccAAGGCATTCTCTTTCCAatccccccctgct
tattaatttttggaaaatgctTTTTGGAAGTTCACTCTTTTGCCCAAATT
CTTGCTGTGTTGGCCtccattttaaaaattttccacccatgacattttta
ttcatagaaaaacagccataacttttgatgcattaatttagaagattttt
ccgaaaaatttaaaacagttcaattctttgcggacagtttgaaaaaactt
cgaaacaaaaaagttaattacccattaaaacttagcactttttatagaag
gaggtgatgcaacatatcattaacgtctttttaaagttcacaacgtcatt
tttacaattaaattcttaattactcttaagagatttgattaaaaagcaat
ttataaaggcaattctttgtcaaaagtgttaaagaacctaaaaagtaact
tttatgttcaaatacttaaatcaatttttcgactatggtcagagccccta
agttttgtgattttttcaCCAACCCCGATTATTCCAAAAAACCCAATTAT
TAGGAACCCGAGAGTACCGCTTTCTGGGGCACAGCGCGCCTTCTACTAAC
TTCTTGATTAAGGTATGGTGCCTGGCGCTCTAAACATAGGAAATACAGTA
ATCATATCTTAGATTCATGAGCTTAAAAGAAACTTGTACGTTAAAAGTTT
GATAccaattgaaaaagaattaaatGGTTGAAAATATATAATCCGTTTTT
GTACCCgttaattttgacgttcacGAG Coding sequence (CDS) from alignment at sc0000038:550172..558248+ >TCONS_00003909 ID=TCONS_00003909|Name=TCONS_00003909|organism=Clytia hemisphaerica|type=CDS|length=7176bp|location=Sequence derived from alignment at sc0000038:550172..558248+ (Clytia hemisphaerica)
ATGTGGAGACAAGCTTGCCCAAATATCCCTAGTATACCAAATCCACGTGG
TGCTATTCTCAACTTTCTTAAAGGAGTTTGGGGTCGAGGTAATTCAACCC
TCTCAACAGCCATTTACTCAAGCGAGATGAAAGTAAAACTATTACCAGCC
CTTCAAGACAATTACATGTACATGATCATTTGTGAGCAATCACGAGAAGC
TGCTATTATTGATCCTGTGGAACCGGAGAAATGCTTGAATGcactaaaag
aagaaaatgtcaaattgACACACATCCTTACTACTCATCATCATTGGGAT
CATGCTGGCGGAAATGAGGAGATGTGCAAATTGGTCAAAGGACTGACTGT
GTGCGGTGGCGATGATAGAATTGGTGCTCTCAATAAAAAAGTTGAAGATG
GTGATAAACTTAAGATCGGTAACCTAGATGTCACGTGTATTTTTACGCCA
TGTCATACAATGGGTCATATTTGTTATTTGGTGGAAGGAAATTCAAATGC
TCCGGCACTTTTCACAGGAGACACATTGTTTGTAGGCGGTTGTGGGCGGT
TCTTTGAAGGTACACCACACCAAATGCATGAAGCACTCATTGAGAAATTA
TCAAAACTACCCGATCATTGTAATGTTTATTGTGGTCACGAGTATACTGT
ACAGAATCTACAATACGCACTTCATGTTGAGCCAGAAAATAAAGATCTCA
TTGAGAAAATGGAGTGGGCAAagGGTCGCAGAGAAAGAAATCTTCCAACA
ATACCATCTTCTTTAAACGAAGAGAAGTTATACAATCCTTTCATGCGAAC
TAGTCAACCAGCTGTTCAACAACACGTCCAATTGACGGATCCAATCGAAG
TGATGGGTGCtattagaaaagaaaaagatactTTTAAACCCAAATAAATG
TGGAGACAAGCTTGCCCAAATATCCCTAGTATACCAAATCCACGTGGTGC
TATTCTCAACTTTCTTAAAGGAGTTTGGGGTCGAGGTAATTCAACCCTCT
CAACAGCCATTTACTCAAGCGAGATGAAAGTAAAACTATTACCAGCCCTT
CAAGACAATTACATGTACATGATCATTTGTGAGCAATCACGAGAAGCTGC
TATTATTGATCCTGTGGAACCGGAGAAATGCTTGAATGcactaaaagaag
aaaatgtcaaattgACACACATCCTTACTACTCATCATCATTGGGATCAT
GCTGGCGGAAATGAGGAGATGTGCAAATTGGTCAAAGGACTGACTGTGTG
CGGTGGCGATGATAGAATTGGTGCTCTCAATAAAAAAGTTGAAGATGGTG
ATAAACTTAAGATCGGTAACCTAGATGTCACGTGTATTTTTACGCCATGT
CATACAATGGGTCATATTTGTTATTTGGTGGAAGGAAATTCAAATGCTCC
GGCACTTTTCACAGGAGACACATTGTTTGTAGGCGGTTGTGGGCGGTTCT
TTGAAGGTACACCACACCAAATGCATGAAGCACTCATTGAGAAATTATCA
AAACTACCCGATCATTGTAATGTTTATTGTGGTCACGAGTATACTGTACA
GAATCTACAATACGCACTTCATGTTGAGCCAGAAAATAAAGATCTCATTG
AGAAAATGGAGTGGGCAAagGGTCGCAGAGAAAGAAATCTTCCAACAATA
CCATCTTCTTTAAACGAAGAGAAGTTATACAATCCTTTCATGCGAACTAG
TCAACCAGCTGTTCAACAACACGTCCAATTGACGGATCCAATCGAAGTGA
TGGGTGCtattagaaaagaaaaagatactTTTAAACCCAAATAAATGTGG
AGACAAGCTTGCCCAAATATCCCTAGTATACCAAATCCACGTGGTGCTAT
TCTCAACTTTCTTAAAGGAGTTTGGGGTCGAGGTAATTCAACCCTCTCAA
CAGCCATTTACTCAAGCGAGATGAAAGTAAAACTATTACCAGCCCTTCAA
GACAATTACATGTACATGATCATTTGTGAGCAATCACGAGAAGCTGCTAT
TATTGATCCTGTGGAACCGGAGAAATGCTTGAATGcactaaaagaagaaa
atgtcaaattgACACACATCCTTACTACTCATCATCATTGGGATCATGCT
GGCGGAAATGAGGAGATGTGCAAATTGGTCAAAGGACTGACTGTGTGCGG
TGGCGATGATAGAATTGGTGCTCTCAATAAAAAAGTTGAAGATGGTGATA
AACTTAAGATCGGTAACCTAGATGTCACGTGTATTTTTACGCCATGTCAT
ACAATGGGTCATATTTGTTATTTGGTGGAAGGAAATTCAAATGCTCCGGC
ACTTTTCACAGGAGACACATTGTTTGTAGGCGGTTGTGGGCGGTTCTTTG
AAGGTACACCACACCAAATGCATGAAGCACTCATTGAGAAATTATCAAAA
CTACCCGATCATTGTAATGTTTATTGTGGTCACGAGTATACTGTACAGAA
TCTACAATACGCACTTCATGTTGAGCCAGAAAATAAAGATCTCATTGAGA
AAATGGAGTGGGCAAagGGTCGCAGAGAAAGAAATCTTCCAACAATACCA
TCTTCTTTAAACGAAGAGAAGTTATACAATCCTTTCATGCGAACTAGTCA
ACCAGCTGTTCAACAACACGTCCAATTGACGGATCCAATCGAAGTGATGG
GTGCtattagaaaagaaaaagatactTTTAAACCCAAATAAATGTGGAGA
CAAGCTTGCCCAAATATCCCTAGTATACCAAATCCACGTGGTGCTATTCT
CAACTTTCTTAAAGGAGTTTGGGGTCGAGGTAATTCAACCCTCTCAACAG
CCATTTACTCAAGCGAGATGAAAGTAAAACTATTACCAGCCCTTCAAGAC
AATTACATGTACATGATCATTTGTGAGCAATCACGAGAAGCTGCTATTAT
TGATCCTGTGGAACCGGAGAAATGCTTGAATGcactaaaagaagaaaatg
tcaaattgACACACATCCTTACTACTCATCATCATTGGGATCATGCTGGC
GGAAATGAGGAGATGTGCAAATTGGTCAAAGGACTGACTGTGTGCGGTGG
CGATGATAGAATTGGTGCTCTCAATAAAAAAGTTGAAGATGGTGATAAAC
TTAAGATCGGTAACCTAGATGTCACGTGTATTTTTACGCCATGTCATACA
ATGGGTCATATTTGTTATTTGGTGGAAGGAAATTCAAATGCTCCGGCACT
TTTCACAGGAGACACATTGTTTGTAGGCGGTTGTGGGCGGTTCTTTGAAG
GTACACCACACCAAATGCATGAAGCACTCATTGAGAAATTATCAAAACTA
CCCGATCATTGTAATGTTTATTGTGGTCACGAGTATACTGTACAGAATCT
ACAATACGCACTTCATGTTGAGCCAGAAAATAAAGATCTCATTGAGAAAA
TGGAGTGGGCAAagGGTCGCAGAGAAAGAAATCTTCCAACAATACCATCT
TCTTTAAACGAAGAGAAGTTATACAATCCTTTCATGCGAACTAGTCAACC
AGCTGTTCAACAACACGTCCAATTGACGGATCCAATCGAAGTGATGGGTG
CtattagaaaagaaaaagatactTTTAAACCCAAATAAATGTGGAGACAA
GCTTGCCCAAATATCCCTAGTATACCAAATCCACGTGGTGCTATTCTCAA
CTTTCTTAAAGGAGTTTGGGGTCGAGGTAATTCAACCCTCTCAACAGCCA
TTTACTCAAGCGAGATGAAAGTAAAACTATTACCAGCCCTTCAAGACAAT
TACATGTACATGATCATTTGTGAGCAATCACGAGAAGCTGCTATTATTGA
TCCTGTGGAACCGGAGAAATGCTTGAATGcactaaaagaagaaaatgtca
aattgACACACATCCTTACTACTCATCATCATTGGGATCATGCTGGCGGA
AATGAGGAGATGTGCAAATTGGTCAAAGGACTGACTGTGTGCGGTGGCGA
TGATAGAATTGGTGCTCTCAATAAAAAAGTTGAAGATGGTGATAAACTTA
AGATCGGTAACCTAGATGTCACGTGTATTTTTACGCCATGTCATACAATG
GGTCATATTTGTTATTTGGTGGAAGGAAATTCAAATGCTCCGGCACTTTT
CACAGGAGACACATTGTTTGTAGGCGGTTGTGGGCGGTTCTTTGAAGGTA
CACCACACCAAATGCATGAAGCACTCATTGAGAAATTATCAAAACTACCC
GATCATTGTAATGTTTATTGTGGTCACGAGTATACTGTACAGAATCTACA
ATACGCACTTCATGTTGAGCCAGAAAATAAAGATCTCATTGAGAAAATGG
AGTGGGCAAagGGTCGCAGAGAAAGAAATCTTCCAACAATACCATCTTCT
TTAAACGAAGAGAAGTTATACAATCCTTTCATGCGAACTAGTCAACCAGC
TGTTCAACAACACGTCCAATTGACGGATCCAATCGAAGTGATGGGTGCta
ttagaaaagaaaaagatactTTTAAACCCAAATAAATGTGGAGACAAGCT
TGCCCAAATATCCCTAGTATACCAAATCCACGTGGTGCTATTCTCAACTT
TCTTAAAGGAGTTTGGGGTCGAGGTAATTCAACCCTCTCAACAGCCATTT
ACTCAAGCGAGATGAAAGTAAAACTATTACCAGCCCTTCAAGACAATTAC
ATGTACATGATCATTTGTGAGCAATCACGAGAAGCTGCTATTATTGATCC
TGTGGAACCGGAGAAATGCTTGAATGcactaaaagaagaaaatgtcaaat
tgACACACATCCTTACTACTCATCATCATTGGGATCATGCTGGCGGAAAT
GAGGAGATGTGCAAATTGGTCAAAGGACTGACTGTGTGCGGTGGCGATGA
TAGAATTGGTGCTCTCAATAAAAAAGTTGAAGATGGTGATAAACTTAAGA
TCGGTAACCTAGATGTCACGTGTATTTTTACGCCATGTCATACAATGGGT
CATATTTGTTATTTGGTGGAAGGAAATTCAAATGCTCCGGCACTTTTCAC
AGGAGACACATTGTTTGTAGGCGGTTGTGGGCGGTTCTTTGAAGGTACAC
CACACCAAATGCATGAAGCACTCATTGAGAAATTATCAAAACTACCCGAT
CATTGTAATGTTTATTGTGGTCACGAGTATACTGTACAGAATCTACAATA
CGCACTTCATGTTGAGCCAGAAAATAAAGATCTCATTGAGAAAATGGAGT
GGGCAAagGGTCGCAGAGAAAGAAATCTTCCAACAATACCATCTTCTTTA
AACGAAGAGAAGTTATACAATCCTTTCATGCGAACTAGTCAACCAGCTGT
TCAACAACACGTCCAATTGACGGATCCAATCGAAGTGATGGGTGCtatta
gaaaagaaaaagatactTTTAAACCCAAATAAATGTGGAGACAAGCTTGC
CCAAATATCCCTAGTATACCAAATCCACGTGGTGCTATTCTCAACTTTCT
TAAAGGAGTTTGGGGTCGAGGTAATTCAACCCTCTCAACAGCCATTTACT
CAAGCGAGATGAAAGTAAAACTATTACCAGCCCTTCAAGACAATTACATG
TACATGATCATTTGTGAGCAATCACGAGAAGCTGCTATTATTGATCCTGT
GGAACCGGAGAAATGCTTGAATGcactaaaagaagaaaatgtcaaattgA
CACACATCCTTACTACTCATCATCATTGGGATCATGCTGGCGGAAATGAG
GAGATGTGCAAATTGGTCAAAGGACTGACTGTGTGCGGTGGCGATGATAG
AATTGGTGCTCTCAATAAAAAAGTTGAAGATGGTGATAAACTTAAGATCG
GTAACCTAGATGTCACGTGTATTTTTACGCCATGTCATACAATGGGTCAT
ATTTGTTATTTGGTGGAAGGAAATTCAAATGCTCCGGCACTTTTCACAGG
AGACACATTGTTTGTAGGCGGTTGTGGGCGGTTCTTTGAAGGTACACCAC
ACCAAATGCATGAAGCACTCATTGAGAAATTATCAAAACTACCCGATCAT
TGTAATGTTTATTGTGGTCACGAGTATACTGTACAGAATCTACAATACGC
ACTTCATGTTGAGCCAGAAAATAAAGATCTCATTGAGAAAATGGAGTGGG
CAAagGGTCGCAGAGAAAGAAATCTTCCAACAATACCATCTTCTTTAAAC
GAAGAGAAGTTATACAATCCTTTCATGCGAACTAGTCAACCAGCTGTTCA
ACAACACGTCCAATTGACGGATCCAATCGAAGTGATGGGTGCtattagaa
aagaaaaagatactTTTAAACCCAAATAAATGTGGAGACAAGCTTGCCCA
AATATCCCTAGTATACCAAATCCACGTGGTGCTATTCTCAACTTTCTTAA
AGGAGTTTGGGGTCGAGGTAATTCAACCCTCTCAACAGCCATTTACTCAA
GCGAGATGAAAGTAAAACTATTACCAGCCCTTCAAGACAATTACATGTAC
ATGATCATTTGTGAGCAATCACGAGAAGCTGCTATTATTGATCCTGTGGA
ACCGGAGAAATGCTTGAATGcactaaaagaagaaaatgtcaaattgACAC
ACATCCTTACTACTCATCATCATTGGGATCATGCTGGCGGAAATGAGGAG
ATGTGCAAATTGGTCAAAGGACTGACTGTGTGCGGTGGCGATGATAGAAT
TGGTGCTCTCAATAAAAAAGTTGAAGATGGTGATAAACTTAAGATCGGTA
ACCTAGATGTCACGTGTATTTTTACGCCATGTCATACAATGGGTCATATT
TGTTATTTGGTGGAAGGAAATTCAAATGCTCCGGCACTTTTCACAGGAGA
CACATTGTTTGTAGGCGGTTGTGGGCGGTTCTTTGAAGGTACACCACACC
AAATGCATGAAGCACTCATTGAGAAATTATCAAAACTACCCGATCATTGT
AATGTTTATTGTGGTCACGAGTATACTGTACAGAATCTACAATACGCACT
TCATGTTGAGCCAGAAAATAAAGATCTCATTGAGAAAATGGAGTGGGCAA
agGGTCGCAGAGAAAGAAATCTTCCAACAATACCATCTTCTTTAAACGAA
GAGAAGTTATACAATCCTTTCATGCGAACTAGTCAACCAGCTGTTCAACA
ACACGTCCAATTGACGGATCCAATCGAAGTGATGGGTGCtattagaaaag
aaaaagatactTTTAAACCCAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003909-exon-sc0000038-1491911889:550172..551188 | TCONS_00003909-exon-sc0000038-1491911889:550172..551188 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1510915933:550172..551188 | TCONS_00003909-exon-sc0000038-1510915933:550172..551188 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1575043694:550172..551188 | TCONS_00003909-exon-sc0000038-1575043694:550172..551188 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1491911889:551470..551683 | TCONS_00003909-exon-sc0000038-1491911889:551470..551683 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1510915933:551470..551683 | TCONS_00003909-exon-sc0000038-1510915933:551470..551683 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1575043694:551470..551683 | TCONS_00003909-exon-sc0000038-1575043694:551470..551683 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1491911889:552628..552745 | TCONS_00003909-exon-sc0000038-1491911889:552628..552745 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1510915933:552628..552745 | TCONS_00003909-exon-sc0000038-1510915933:552628..552745 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1575043694:552628..552745 | TCONS_00003909-exon-sc0000038-1575043694:552628..552745 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1491911889:553160..553262 | TCONS_00003909-exon-sc0000038-1491911889:553160..553262 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1510915933:553160..553262 | TCONS_00003909-exon-sc0000038-1510915933:553160..553262 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1575043694:553160..553262 | TCONS_00003909-exon-sc0000038-1575043694:553160..553262 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1491911889:553598..553701 | TCONS_00003909-exon-sc0000038-1491911889:553598..553701 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1510915933:553598..553701 | TCONS_00003909-exon-sc0000038-1510915933:553598..553701 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1575043694:553598..553701 | TCONS_00003909-exon-sc0000038-1575043694:553598..553701 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1491911889:554082..554183 | TCONS_00003909-exon-sc0000038-1491911889:554082..554183 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1510915933:554082..554183 | TCONS_00003909-exon-sc0000038-1510915933:554082..554183 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1575043694:554082..554183 | TCONS_00003909-exon-sc0000038-1575043694:554082..554183 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1491911889:554659..554738 | TCONS_00003909-exon-sc0000038-1491911889:554659..554738 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1510915933:554659..554738 | TCONS_00003909-exon-sc0000038-1510915933:554659..554738 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1575043694:554659..554738 | TCONS_00003909-exon-sc0000038-1575043694:554659..554738 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1491911889:556575..558248 | TCONS_00003909-exon-sc0000038-1491911889:556575..558248 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1510915933:556575..558248 | TCONS_00003909-exon-sc0000038-1510915933:556575..558248 | Clytia hemisphaerica | exon |
| TCONS_00003909-exon-sc0000038-1575043694:556575..558248 | TCONS_00003909-exon-sc0000038-1575043694:556575..558248 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038 | supercontig | sc0000038:550172..558248 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019243 | methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004416 | hydroxyacylglutathione hydrolase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0019243 |
methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione |
| molecular_function |
GO:0004416 |
hydroxyacylglutathione hydrolase activity |
Blast
BLAST of TCONS_00003909 vs. Swiss-Prot (Human)
Match: GLO2 (Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 1.077e-99 Identity = 150/276 (54.35%), Postives = 197/276 (71.38%), Query Frame = 3
Query: 1002 LKGVWGRGNSTLSTAIYSSEMKVKLLPALQDNYMYMIICEQSREAAIIDPVEPEKCLNALKEENVKLTHILTTHHHWDHAGGNEEMCKLVKGLTVCGGDDRIGALNKKVEDGDKLKIGNLDVTCIFTPCHTMGHICYLVE--GNSNAPALFTGDTLFVGGCGRFFEGTPHQMHEALIEKLSKLPDHCNVYCGHEYTVQNLQYALHVEPENKDLIEKMEWAKGRRERNLPTIPSSLNEEKLYNPFMRTSQPAVQQHVQLTDPIEVMGAIRKEKDTFK 1823
L GV+ + + + MKV++LPAL DNYMY++I ++++EAAI+DPV+P+K ++A ++ VKLT +LTTHHHWDHAGGNE++ KL GL V GGDDRIGAL K+ L++G+L+V C+ TPCHT GHICY V G S PA+FTGDTLFV GCG+F+EGT +M +AL+E L +LP VYCGHEYT+ NL++A HVEP N + EK+ WAK + PT+PS+L EE YNPFMR + VQQH TDP+ M A+R+EKD FK
Sbjct: 29 LLGVFCHTDLRKNLTVDEGTMKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETDPVTTMRAVRREKDQFK 304
The following BLAST results are available for this feature:
|
