TCONS_00003909-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00003909-protein
Unique Name	TCONS_00003909-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	298

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00003909-protein ID=TCONS_00003909-protein|Name=TCONS_00003909-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
MWRQACPNIPSIPNPRGAILNFLKGVWGRGNSTLSTAIYSSEMKVKLLPA
LQDNYMYMIICEQSREAAIIDPVEPEKCLNALKEENVKLTHILTTHHHWD
HAGGNEEMCKLVKGLTVCGGDDRIGALNKKVEDGDKLKIGNLDVTCIFTP
CHTMGHICYLVEGNSNAPALFTGDTLFVGGCGRFFEGTPHQMHEALIEKL
SKLPDHCNVYCGHEYTVQNLQYALHVEPENKDLIEKMEWAKGRRERNLPT
IPSSLNEEKLYNPFMRTSQPAVQQHVQLTDPIEVMGAIRKEKDTFKPK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002188	XLOC_002188	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00003909	TCONS_00003909	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001279	Metallo-B-lactamas
IPR032282	HAGH_C
IPR017782	Hydroxyacylglutathione_Hdrlase

Vocabulary: **Biological Process**
Term	Definition
GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione

Vocabulary: **Molecular Function**
Term	Definition
GO:0004416	hydroxyacylglutathione hydrolase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
molecular_function	GO:0004416	hydroxyacylglutathione hydrolase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001279	Metallo-beta-lactamase	SMART	SM00849	Lactamase_B_5a	coord: 53..213 e-value: 1.9E-35 score: 133.8
IPR001279	Metallo-beta-lactamase	GENE3D	3.60.15.10		coord: 43..298 e-value: 5.4E-73 score: 245.1
IPR001279	Metallo-beta-lactamase	PFAM	PF00753	Lactamase_B	coord: 69..195 e-value: 5.5E-9 score: 36.2
IPR001279	Metallo-beta-lactamase	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 43..295
IPR032282	Hydroxyacylglutathione hydrolase, C-terminal domain	PFAM	PF16123	HAGH_C	coord: 214..295 e-value: 3.7E-27 score: 94.5
IPR017782	Hydroxyacylglutathione hydrolase	PIRSF	PIRSF005457	Glx	coord: 38..295 e-value: 1.7E-83 score: 277.7
IPR017782	Hydroxyacylglutathione hydrolase	TIGRFAM	TIGR03413	TIGR03413	coord: 46..295 e-value: 1.4E-84 score: 281.3
IPR017782	Hydroxyacylglutathione hydrolase	HAMAP	MF_01374	Glyoxalase_2	coord: 43..295 score: 36.892

Blast

[Close]

BLAST of TCONS_00003909-protein vs. Swiss-Prot (Human)
Match: GLO2 (Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 5.141e-110
Identity = 150/276 (54.35%), Postives = 197/276 (71.38%), Query Frame = 0

Query:   23 LKGVWGRGNSTLSTAIYSSEMKVKLLPALQDNYMYMIICEQSREAAIIDPVEPEKCLNALKEENVKLTHILTTHHHWDHAGGNEEMCKLVKGLTVCGGDDRIGALNKKVEDGDKLKIGNLDVTCIFTPCHTMGHICYLVE--GNSNAPALFTGDTLFVGGCGRFFEGTPHQMHEALIEKLSKLPDHCNVYCGHEYTVQNLQYALHVEPENKDLIEKMEWAKGRRERNLPTIPSSLNEEKLYNPFMRTSQPAVQQHVQLTDPIEVMGAIRKEKDTFK 296
            L GV+   +   +  +    MKV++LPAL DNYMY++I ++++EAAI+DPV+P+K ++A ++  VKLT +LTTHHHWDHAGGNE++ KL  GL V GGDDRIGAL  K+     L++G+L+V C+ TPCHT GHICY V   G S  PA+FTGDTLFV GCG+F+EGT  +M +AL+E L +LP    VYCGHEYT+ NL++A HVEP N  + EK+ WAK +     PT+PS+L EE  YNPFMR  +  VQQH   TDP+  M A+R+EKD FK
Sbjct:   29 LLGVFCHTDLRKNLTVDEGTMKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETDPVTTMRAVRREKDQFK 304

The following BLAST results are available for this feature:

BLAST of TCONS_00003909-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00003909-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GLO2	5.141e-110	54.35	Hydroxyacylglutathione hydrolase, mitochondrial OS...	[more]

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TCONS_00003909-protein (polypeptide) - C. hemisphaerica