TCONS_00003751 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003751
Unique NameTCONS_00003751
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2955

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003751 ID=TCONS_00003751|Name=TCONS_00003751|organism=Clytia hemisphaerica|type=transcript|length=2955bp
GAGGATGGAACTCAAAACGCAAATCCAAGCATTGCTCCTTTACATCCTAG
TCGCTCACTCACTTGCCAAGGTATGCCTGGTGAAGGAGGAAAAGAACAAG
GAGAATGTATTTATGCTTGAGAAAGGTGGCGATTGCCAAGAATGTCAGCA
ATTCTTCTACAAGAATGTGTGGCCAAAATTCTCAAGGAACAGTATCAAAT
GGCATTTCATTTGTCAGTATTATGAGAATCAACCAAGTTTTTTTACATTG
TACGATATCAGATATCGAATGCCTTTGTTTTCAGCGTATAGACTGAATCT
GGGCGCTAAAGAAGCGTCTTGCAATATAGATGAGCCATGTCCTGAAGCTG
CGGGCAACAATGGTTTAGTATCTAGCAGTAGTGGGGCTGGAGCTTCAGGA
ACAAGTAATACTAACCAAAAAGTTGGGGAAAAACGGCCACAAACTTCTAA
TTCTGGTAAACCAACACCAAACGTAAAAAGACCAAAAATCGAATCACCTT
CATCGAATCAAGGTTCAAAGGAACAAAAGCCAGGGCTAAGGAGTGAAGAG
AACACCAAAGTCTCTTTTTCAGGCTTGCAAGAGAAATCCTTGTCGTTAGT
GGACCATAGTAACAGGAATAACAAAGGTGACAGTTACCCATTCAAACGAA
CGAAAGAGAAGACGAGTAAAGAAAACTATGAAGAGGAGAATGAAGATAGA
AAGAAATTACGAAAGGAAGAAGACAAGCGAACAAAACCGGACGCCGAACC
CTTCGATGATATGGATCGTAGAAGTAGGATTGGCGCTACAGGGCCAGCAC
TAAGTGCTCGGATTGGCGTTGCAGGGCCAGCACTAAGTGCTCAAGATGAC
CATGAATCATTACgccttgaagaaaattttgttaaaaagacAAAGTTGAA
ACGACGATATGAGGGAGATATTGATGTCGACAGAGTTTCCTTTGATGATG
ATTTCGATCGAAAGAGACGTAGTGAAAATGATGATATTGAATCAACGGTG
GCGAATGCTGGAGAAGTCAATGTCCTTCCTGGCAAGCCTCGTTCTGAAAA
GGAAGTGTCTCAACTGGCAAATTCTATTAAATCAAGAATTACTGAAGCCT
CCAGTGAAGAATCATTGACAAAATTTGGCCCTGGATTGCTGGCAAACTTA
CCTGAGAAACCTAAAAGTGAAAAGATCAACTCAACGGTGGCGAATACTGG
AGCCAATGTCCTTTCTGATGGGGAATCTGTTAAGAGAAAACGTAAGCTTA
GCAATAATTTTGAATCGGTCTCACAACTGCATACTGTTGCAGGTTATCGA
CGTAGTTTCAATGGAAAGAACTTTACTGTATCTAGCTTGTACGATAATTT
CATTCAAGATTTTTATGAGAATCACAGCGGCGAGAAGAAAGAAAATAGTT
TTCGCAGTAAAAAGAAGTCAACAAAGGGAAttaaaaaatcacacaaaaac
ttTGTAGAGAAAGACCTTCAGCTTGGTAAGCCTCATACTGAAAAGAAAGT
GTCGCAACTGGTAAATCATGTTAAATCAAGAGTTACTGGAGCTTCAAGAG
AAGATTTTTTAACGAAACTTCGCCCTGGATTGCTTGAGTCAGGAAAAGAA
AAGGATAATGTTACACAAAATTCCAATGGGACAACAACCGCATTGAAGCT
TCCTTTAGCAAAATATATTGACTTGACCATATTAGGAGATTCAAGTAATG
ACTCTTCCTCGAAAAACATAGATCAAGAAAAGGATGTACTCAGTCTTTGG
CAACCTAACAAACCTAAAACCGGAAATAGCGTCTCTCCTTTGGGAAAATA
TATTGATTCAACAATAATGGGAGAATCAAATTCAACAGATTATCGTGCAC
AAAAACGAGGGCCCGGGCAAGGAGGGGCCAGTGACACGACCAAAAGTGAG
AAaaagaaacaatggaaaaatgAGCCACAACTTGAATTGAGTAATGTTGA
CCCAAACAGAGGgaaatttgaaaacatgatGAAAACAGGTTCAAAAAATT
TCCCTGTTTCTTCACAGAGCGTTAATAATCAACCTcagaattcaaatttt
gaaaattctggaTGGGACAGAGGACATTTGAATCCAAATCGATTTCAAAT
AGACGATGATAGCGAAGCCACTTACACGCTAACAAATGCGGTGCCACAAT
ACCCAGGGTTCAACTCCGGTTATTGGTGTGAGCTCGAACAATACACTTTA
CAAGCAATGAAGACATTCTGTAAGGGTGGTGTACCCTATTTGATCACTGG
CGCAACGCCCGGTTTAACGCCCAAAGAACGAGAAATGGATATTGGGACAA
AGTTAAAAGAGAAACAGATTGTGATTCCATTGATGTTGTACACTGCAGCA
TGTTGTGATAAAGGAAAAGAATCATTCTCCTTTGGATTTTATGGTACAAA
CGAAGCAAAACCCAAAATTGGAGTTATCAAGGTCAACGAGTTGATCAGCA
TTGTGAACAAACAGCAAGATCCAACAGATAGAATCATCCTTGATCAATTC
TTCCCTGGAGATGCAGACAACTGCAAAAGTGACCAAGGATCACCAGCAAT
GAACGAGATCAAGACGAAAGTTGAAGAAATGCAAATAAAACGACTTGAGA
ATCTGATTTTTGATGAATCTTTACTTAAACCTGAACCAAATAGCAAGGAT
GCTGGGTCATCAGGATCAGGAGGAAGCCAGGCTTCCACCAGTGGGAAGGG
GGCAACAACCAGTGCTAAAGGAGGAAGCAATAAGAGGAAGCTACATGATA
ATGATATAAAGGAGACCGATGAGGATGTAGTCAATCTTGATGTTTTCCAA
TAGATGTACTAAAATCTCAATTATTAACCATTTTTGTATATAATCTACAC
AATCCGAACAATAGGCCTCAGAACTCTATTGAACCCTTATGAACCCTAAA
AATCCTTTAATCTTCCAACCTTAACTGGCTTTCAAGTGGAGCGGTTACCG
GTAAT
Run BLAST on NCBI

protein sequence of TCONS_00003751-protein

>TCONS_00003751-protein ID=TCONS_00003751-protein|Name=TCONS_00003751-protein|organism=Clytia hemisphaerica|type=polypeptide|length=933bp
RMELKTQIQALLLYILVAHSLAKVCLVKEEKNKENVFMLEKGGDCQECQQ
FFYKNVWPKFSRNSIKWHFICQYYENQPSFFTLYDIRYRMPLFSAYRLNL
GAKEASCNIDEPCPEAAGNNGLVSSSSGAGASGTSNTNQKVGEKRPQTSN
SGKPTPNVKRPKIESPSSNQGSKEQKPGLRSEENTKVSFSGLQEKSLSLV
DHSNRNNKGDSYPFKRTKEKTSKENYEEENEDRKKLRKEEDKRTKPDAEP
FDDMDRRSRIGATGPALSARIGVAGPALSAQDDHESLRLEENFVKKTKLK
RRYEGDIDVDRVSFDDDFDRKRRSENDDIESTVANAGEVNVLPGKPRSEK
EVSQLANSIKSRITEASSEESLTKFGPGLLANLPEKPKSEKINSTVANTG
ANVLSDGESVKRKRKLSNNFESVSQLHTVAGYRRSFNGKNFTVSSLYDNF
IQDFYENHSGEKKENSFRSKKKSTKGIKKSHKNFVEKDLQLGKPHTEKKV
SQLVNHVKSRVTGASREDFLTKLRPGLLESGKEKDNVTQNSNGTTTALKL
PLAKYIDLTILGDSSNDSSSKNIDQEKDVLSLWQPNKPKTGNSVSPLGKY
IDSTIMGESNSTDYRAQKRGPGQGGASDTTKSEKKKQWKNEPQLELSNVD
PNRGKFENMMKTGSKNFPVSSQSVNNQPQNSNFENSGWDRGHLNPNRFQI
DDDSEATYTLTNAVPQYPGFNSGYWCELEQYTLQAMKTFCKGGVPYLITG
ATPGLTPKEREMDIGTKLKEKQIVIPLMLYTAACCDKGKESFSFGFYGTN
EAKPKIGVIKVNELISIVNKQQDPTDRIILDQFFPGDADNCKSDQGSPAM
NEIKTKVEEMQIKRLENLIFDESLLKPEPNSKDAGSSGSGGSQASTSGKG
ATTSAKGGSNKRKLHDNDIKETDEDVVNLDVFQ
Run BLAST on NCBI

transcript from alignment at sc0000031:504985..510037+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003751 ID=TCONS_00003751|Name=TCONS_00003751|organism=Clytia hemisphaerica|type=transcript|length=5053bp|location=Sequence derived from alignment at sc0000031:504985..510037+ (Clytia hemisphaerica)
GAGGATGGAACTCAAAACGCAAATCCAAGCATTGCTCCTTTACATCCTAG TCGCTCACTCACTTGCCAAGGTATGCCTGGTGAAGGAGGAAAAGAACAAG GAGAATGTATTTATGCTTGAGAAAGGTGGCGATTGCCAAGAATGTCAGCA ATTCTTCTACAAGAATGTGTGGCCAAAATTCTCAAGGAACAGTATCAAAT GGCATTTCATTTGTCAGTATTATGAGAATCAACCAAGTTTTTTTACATTG TACGATATCAGATATCGAATGCCTTTGTTTTCAGCGTATAGACTGAATCT GGGCGCTAAAGAAGCGTCTTGCAATATAGATGAGCCATGTCCTGAAGCTG CGGGCAACAATGGTTTAGTATCTAGCAGTAGTGGGGCTGGAGCTTCAGGA ACAAGTAATACTAACCAAAAAGTTGGGGAAAAACGGCCACAAACTTCTAA TTCTGGTAAACCAACACCAAACGTAAAAAGACCAAAAATCGAATCACCTT CATCGAATCAAGGTTCAAAGGAACAAAAGCCAGGGCTAAGGAGTGAAGAG AACACCAAAGTCTCTTTTTCAGGCTTGCAAGAGAAATCCTTGTCGTTAGT GGACCATAGTAACAGGAATAACAAAGGTGACAGTTACCCATTCAAACGAA CGAAAGAGAAGACGAGTAAAGAAAACTATGAAGAGGAGAATGAAGATAGA AAGAAATTACGAAAGGAAGAAGACAAGCGAACAAAACCGGACGCCGAACC CTTCGATGATATGGATCGTAGAAGTAGGATTGGCGCTACAGGGCCAGCAC TAAGTGCTCGGATTGGCGTTGCAGGGCCAGCACTAAGTGCTCAAGATGAC CATGAATCATTACgccttgaagaaaattttgttaaaaagacAAAGTTGAA ACGACGATATGAGGGAGATATTGATGTCGACAGAGTTTCCTTTGATGATG ATTTCGATCGAAAGAGACGTAGTGAAAATGATGATATTGAATCAACGGTG GCGAATGCTGGAGAAGTCAATGTCCTTCCTGGCAAGCCTCGTTCTGAAAA GGAAGTGTCTCAACTGGCAAATTCTATTAAATCAAGAATTACTGAAGCCT CCAGTGAAGAATCATTGACAAAATTTGGCCCTGGATTGCTGGCAAACTTA CCTGAGAAACCTAAAAGTGAAAAGATCAACTCAACGGTGGCGAATACTGG AGCCAATGTCCTTTCTGATGGGGAATCTGTTAAGAGAAAACGTAAGCTTA GCAATAATTTTGAATCGGTCTCACAACTGCATACTGTTGCAGGTTATCGA CGTAGTTTCAATGGAAAGAACTTTACTGTATCTAGCTTGTACGATAATTT CATTCAAGATTTTTATGAGAATCACAGCGGCGAGAAGAAAGAAAATAGTT TTCGCAGTAAAAAGAAGTCAACAAAGGGAAttaaaaaatcacacaaaaac ttTGTAGAGAAAGACCTTCAGCTTGGTAAGCCTCATACTGAAAAGAAAGT GTCGCAACTGGTAAATCATGTTAAATCAAGAGTTACTGGAGCTTCAAGAG AAGATTTTTTAACGAAACTTCGCCCTGGATTGCTTGAGTCAGGAAAAGAA AAGGATAATGTTACACAAAATTCCAATGGGACAACAACCGCATTGAAGCT TCCTTTAGCAAAATATATTGACTTGACCATATTAGGAGATTCAAGTAATG ACTCTTCCTCGAAAAACATAGATCAAGAAAAGGATGTACTCAGTCTTTGG CAACCTAACAAACCTAAAACCGGAAATAGCGTCTCTCCTTTGGGAAAATA TATTGATTCAACAATAATGGGAGAATCAAATTCAACAGATTATCGTGCAC AAAAACGAGGGCCCGGGCAAGGAGGGGCCAGTGACACGACCAAAAGTGAG AAaaagaaacaatggaaaaatgAGCCACAACTTGAATTGAGTAATGTTGA CCCAAACAGAGGgaaatttgaaaacatgatGAAAACAGGTTCAAAAAATT TCCCTGTTTCTTCACAGAGCGTTAATAATCAACCTcagaattcaaatttt gaaaattctggaTGGGACAGAGGACATTTGAATCCAAATCGATTTCAAGT AAGTAcacgtatttttataagaataaactataagaagataaggcttcgat gaccaaaatgttaagaacaagttttagaacattttaatgctGCGTGGACc ataaaacacctgatttcttagaaaaatggacagaGATATACtctaaaaat ggtgaaaatacgaacatgttaagaacatctttaggcttaaaactccaaaa cttaaaaacatccgaaggcttcagaaattgtggatgttcttatgagaaaa aaaattttactctAATCTTCAGAATGCGTTCCCGTCAgggaacaaaacaa aaccctcttaaaatactctctctataattcgaatctctcttttattcgaa aaaataagattccccgttcgacGTTCGATTTAGTGAGAGTCAAAAAATGG ACGGGTTACGAATGGAATGGTattacccagctgacacacaacatcgtttc aacgtttttctaatattcacaacgttcatataacgttaaatgaacgttga aacaacgctgtgtgTCAGCTCGGTACGTTATTAACGACATCCGGTCAATA CCATTTCCAATATTCCATCCGTAATTTTGTTTTATAGATAGACGATGATA GCGAAGCCACTTACACGCTAACAAATGCGGTGCCACAATACCCAGGGTTC AACTCCGGTTATTGGTGTGAGCTCGAACAATACACTTTACAAGCAATGAA GACATTCTGTAAGGGTGGTGTACCCTATTTGATCACTGGCGCAACGCCCG GTTTAACGCCCAAAGAACGAGAAATGGATATTGGGACAAAGTTAAAAGAG AAACAGGTAACActaaatatattgagaatttaggtCAGaaggaaaaatca attttctagtttccaccctgaaaattgtctaATCTAAATAACCAAAactc gaccctgtcagatacgcattttgaaaaattagtaaatttggcaCCTTACC ACATATCTTCAGAACCTAAAAAAAGGACTCTaaccagcggcacatccccg tacccaattttctGCGTGATCCCTGCTCAATATAACAACAAATATCTAAt catataaaacactagatcgAGTTATTCTGTCCCTTCTTGAAGCTTAACAA TGCGCCACCTTTAAAAGTAGACTACAGTTCGTTGCCCGCAATTTGACCAA TCAACGCCATTCTCTTGCCTCTTCGTTTCTTGCTATGTCGCTGTTTGTCA cattgaacaaattgccggtgCCGAACTATAATTTACTACTGTGTAGTCCA CTCAGCAAAAACGGCGCGTTATTTTACTTCAACTTAGCTGTGGTTTGAGA AAGACAGCAtgagctctatctagtgttttatataagataccCGTATGTAA TCTAGCACGTTTGAAACAAGGTTGTGAGTGCGGATCTCTTTCACGTCGAA TATTTGTATTCTAgtgtcgatattttacgtggatagcccagtaatctagg acttttagacagtctttcgattgttttcacggggtccacggccagctgGC ATAgttatctatgaactgaacggaacattggaaggagcggggattcgaac cgtgAATCCCTGGTtttgagacgctgacgcctttgaccacttggccatcg cttcATAATATGTTTTCTATTTCAGATTGTGATTCCATTGATGTTGTACA CTGCAGCATGTTGTGATAAAGGAAAAGAATCATTCTCCTTTGGATTTTAT GGTACAAACGAAGCAAAACCCAAAATTGGAGTTATCAAGGTTAGACTcga gcccagctggcacacaacgttatttcaacgttcattttatgtccacaacg tccatataacgttagatgaacgttaagaCAACGTCGTGTACCTGCTGGGA TTTTaaccttttcttttccttttgaaaaaacgTTTTCCTTTACGGAATAG CTATTTTCATTATATCACAACTAGGTaccagtttgcagagtgtggcacgt ttgctcgagatctcgagtgcacaactcggaaaaagtcgagtgcaggtgca aaatttgagcttttCAGACGGATTTTTAACCTCCATTGCAGAGTTCAGCT ATTTTTTCCTCAAGTGcagctaattttagcaatttttgcctttttgggcG AATTTCTGAGTTATAAGTGCACTTTTTccggaccaaaatttatcaggtcC GTTCTTCCATTACAGAACTTGGTATTACCGAATTTTTCCTCGAGTACAGC cttgccatactctgcaaactaGGGCACAGAATATAATCGAGACAGGGATG AAACTACTATCGGTATTCGAATCTCAAAAGTTCAGTAGATTGTAAATAGT CTCGTCAGTAAATACCATCCGGATAATCATAATATATTTATTTGTCTCGC TATCGAACACAACGTGCTCAAACTGTCAAAAATGGCTTGTAAAAAGAATT TATCAATCTTTCTTCTCACACAACAACAGGTCAACGAGTTGATCAGCATT GTGAACAAACAGCAAGATCCAACAGATAGAATCATCCTTGATCAATTCTT CCCTGGAGATGCAGACAACTGCAAAAGTGACCAAGGATCACCAGCAATGA ACGAGATCAAGACGAAAGTTGAAGAAATGCAAATAAAACGACTTGAGAAT CTGATTTTTGATGAATCTTTACTTAAACCTGAACCAAATAGCAAGGATGC TGGGTCATCAGGATCAGGAGGAAGCCAGGCTTCCACCAGTGGGAAGGGGG CAACAACCAGTGCTAAAGGAGGAAGCAATAAGAGGAAGCTACATGATAAT GATATAAAGGAGACCGATGAGGATGTAGTCAATCTTGATGTTTTCCAATA GATGTACTAAAATCTCAATTATTAACCATTTTTGTATATAATCTACACAA TCCGAACAATAGGCCTCAGAACTCTATTGAACCCTTATGAACCCTAAAAA TCCTTTAATCTTCCAACCTTAACTGGCTTTCAAGTGGAGCGGTTACCGGT AAT

Coding sequence (CDS) from alignment at sc0000031:504985..510037+

>TCONS_00003751 ID=TCONS_00003751|Name=TCONS_00003751|organism=Clytia hemisphaerica|type=CDS|length=11208bp|location=Sequence derived from alignment at sc0000031:504985..510037+ (Clytia hemisphaerica)
AGGATGGAACTCAAAACGCAAATCCAAGCATTGCTCCTTTACATCCTAGT
CGCTCACTCACTTGCCAAGGTATGCCTGGTGAAGGAGGAAAAGAACAAGG
AGAATGTATTTATGCTTGAGAAAGGTGGCGATTGCCAAGAATGTCAGCAA
TTCTTCTACAAGAATGTGTGGCCAAAATTCTCAAGGAACAGTATCAAATG
GCATTTCATTTGTCAGTATTATGAGAATCAACCAAGTTTTTTTACATTGT
ACGATATCAGATATCGAATGCCTTTGTTTTCAGCGTATAGACTGAATCTG
GGCGCTAAAGAAGCGTCTTGCAATATAGATGAGCCATGTCCTGAAGCTGC
GGGCAACAATGGTTTAGTATCTAGCAGTAGTGGGGCTGGAGCTTCAGGAA
CAAGTAATACTAACCAAAAAGTTGGGGAAAAACGGCCACAAACTTCTAAT
TCTGGTAAACCAACACCAAACGTAAAAAGACCAAAAATCGAATCACCTTC
ATCGAATCAAGGTTCAAAGGAACAAAAGCCAGGGCTAAGGAGTGAAGAGA
ACACCAAAGTCTCTTTTTCAGGCTTGCAAGAGAAATCCTTGTCGTTAGTG
GACCATAGTAACAGGAATAACAAAGGTGACAGTTACCCATTCAAACGAAC
GAAAGAGAAGACGAGTAAAGAAAACTATGAAGAGGAGAATGAAGATAGAA
AGAAATTACGAAAGGAAGAAGACAAGCGAACAAAACCGGACGCCGAACCC
TTCGATGATATGGATCGTAGAAGTAGGATTGGCGCTACAGGGCCAGCACT
AAGTGCTCGGATTGGCGTTGCAGGGCCAGCACTAAGTGCTCAAGATGACC
ATGAATCATTACgccttgaagaaaattttgttaaaaagacAAAGTTGAAA
CGACGATATGAGGGAGATATTGATGTCGACAGAGTTTCCTTTGATGATGA
TTTCGATCGAAAGAGACGTAGTGAAAATGATGATATTGAATCAACGGTGG
CGAATGCTGGAGAAGTCAATGTCCTTCCTGGCAAGCCTCGTTCTGAAAAG
GAAGTGTCTCAACTGGCAAATTCTATTAAATCAAGAATTACTGAAGCCTC
CAGTGAAGAATCATTGACAAAATTTGGCCCTGGATTGCTGGCAAACTTAC
CTGAGAAACCTAAAAGTGAAAAGATCAACTCAACGGTGGCGAATACTGGA
GCCAATGTCCTTTCTGATGGGGAATCTGTTAAGAGAAAACGTAAGCTTAG
CAATAATTTTGAATCGGTCTCACAACTGCATACTGTTGCAGGTTATCGAC
GTAGTTTCAATGGAAAGAACTTTACTGTATCTAGCTTGTACGATAATTTC
ATTCAAGATTTTTATGAGAATCACAGCGGCGAGAAGAAAGAAAATAGTTT
TCGCAGTAAAAAGAAGTCAACAAAGGGAAttaaaaaatcacacaaaaact
tTGTAGAGAAAGACCTTCAGCTTGGTAAGCCTCATACTGAAAAGAAAGTG
TCGCAACTGGTAAATCATGTTAAATCAAGAGTTACTGGAGCTTCAAGAGA
AGATTTTTTAACGAAACTTCGCCCTGGATTGCTTGAGTCAGGAAAAGAAA
AGGATAATGTTACACAAAATTCCAATGGGACAACAACCGCATTGAAGCTT
CCTTTAGCAAAATATATTGACTTGACCATATTAGGAGATTCAAGTAATGA
CTCTTCCTCGAAAAACATAGATCAAGAAAAGGATGTACTCAGTCTTTGGC
AACCTAACAAACCTAAAACCGGAAATAGCGTCTCTCCTTTGGGAAAATAT
ATTGATTCAACAATAATGGGAGAATCAAATTCAACAGATTATCGTGCACA
AAAACGAGGGCCCGGGCAAGGAGGGGCCAGTGACACGACCAAAAGTGAGA
AaaagaaacaatggaaaaatgAGCCACAACTTGAATTGAGTAATGTTGAC
CCAAACAGAGGgaaatttgaaaacatgatGAAAACAGGTTCAAAAAATTT
CCCTGTTTCTTCACAGAGCGTTAATAATCAACCTcagaattcaaattttg
aaaattctggaTGGGACAGAGGACATTTGAATCCAAATCGATTTCAAATA
GACGATGATAGCGAAGCCACTTACACGCTAACAAATGCGGTGCCACAATA
CCCAGGGTTCAACTCCGGTTATTGGTGTGAGCTCGAACAATACACTTTAC
AAGCAATGAAGACATTCTGTAAGGGTGGTGTACCCTATTTGATCACTGGC
GCAACGCCCGGTTTAACGCCCAAAGAACGAGAAATGGATATTGGGACAAA
GTTAAAAGAGAAACAGATTGTGATTCCATTGATGTTGTACACTGCAGCAT
GTTGTGATAAAGGAAAAGAATCATTCTCCTTTGGATTTTATGGTACAAAC
GAAGCAAAACCCAAAATTGGAGTTATCAAGGTCAACGAGTTGATCAGCAT
TGTGAACAAACAGCAAGATCCAACAGATAGAATCATCCTTGATCAATTCT
TCCCTGGAGATGCAGACAACTGCAAAAGTGACCAAGGATCACCAGCAATG
AACGAGATCAAGACGAAAGTTGAAGAAATGCAAATAAAACGACTTGAGAA
TCTGATTTTTGATGAATCTTTACTTAAACCTGAACCAAATAGCAAGGATG
CTGGGTCATCAGGATCAGGAGGAAGCCAGGCTTCCACCAGTGGGAAGGGG
GCAACAACCAGTGCTAAAGGAGGAAGCAATAAGAGGAAGCTACATGATAA
TGATATAAAGGAGACCGATGAGGATGTAGTCAATCTTGATGTTTTCCAAT
AGAGGATGGAACTCAAAACGCAAATCCAAGCATTGCTCCTTTACATCCTA
GTCGCTCACTCACTTGCCAAGGTATGCCTGGTGAAGGAGGAAAAGAACAA
GGAGAATGTATTTATGCTTGAGAAAGGTGGCGATTGCCAAGAATGTCAGC
AATTCTTCTACAAGAATGTGTGGCCAAAATTCTCAAGGAACAGTATCAAA
TGGCATTTCATTTGTCAGTATTATGAGAATCAACCAAGTTTTTTTACATT
GTACGATATCAGATATCGAATGCCTTTGTTTTCAGCGTATAGACTGAATC
TGGGCGCTAAAGAAGCGTCTTGCAATATAGATGAGCCATGTCCTGAAGCT
GCGGGCAACAATGGTTTAGTATCTAGCAGTAGTGGGGCTGGAGCTTCAGG
AACAAGTAATACTAACCAAAAAGTTGGGGAAAAACGGCCACAAACTTCTA
ATTCTGGTAAACCAACACCAAACGTAAAAAGACCAAAAATCGAATCACCT
TCATCGAATCAAGGTTCAAAGGAACAAAAGCCAGGGCTAAGGAGTGAAGA
GAACACCAAAGTCTCTTTTTCAGGCTTGCAAGAGAAATCCTTGTCGTTAG
TGGACCATAGTAACAGGAATAACAAAGGTGACAGTTACCCATTCAAACGA
ACGAAAGAGAAGACGAGTAAAGAAAACTATGAAGAGGAGAATGAAGATAG
AAAGAAATTACGAAAGGAAGAAGACAAGCGAACAAAACCGGACGCCGAAC
CCTTCGATGATATGGATCGTAGAAGTAGGATTGGCGCTACAGGGCCAGCA
CTAAGTGCTCGGATTGGCGTTGCAGGGCCAGCACTAAGTGCTCAAGATGA
CCATGAATCATTACgccttgaagaaaattttgttaaaaagacAAAGTTGA
AACGACGATATGAGGGAGATATTGATGTCGACAGAGTTTCCTTTGATGAT
GATTTCGATCGAAAGAGACGTAGTGAAAATGATGATATTGAATCAACGGT
GGCGAATGCTGGAGAAGTCAATGTCCTTCCTGGCAAGCCTCGTTCTGAAA
AGGAAGTGTCTCAACTGGCAAATTCTATTAAATCAAGAATTACTGAAGCC
TCCAGTGAAGAATCATTGACAAAATTTGGCCCTGGATTGCTGGCAAACTT
ACCTGAGAAACCTAAAAGTGAAAAGATCAACTCAACGGTGGCGAATACTG
GAGCCAATGTCCTTTCTGATGGGGAATCTGTTAAGAGAAAACGTAAGCTT
AGCAATAATTTTGAATCGGTCTCACAACTGCATACTGTTGCAGGTTATCG
ACGTAGTTTCAATGGAAAGAACTTTACTGTATCTAGCTTGTACGATAATT
TCATTCAAGATTTTTATGAGAATCACAGCGGCGAGAAGAAAGAAAATAGT
TTTCGCAGTAAAAAGAAGTCAACAAAGGGAAttaaaaaatcacacaaaaa
cttTGTAGAGAAAGACCTTCAGCTTGGTAAGCCTCATACTGAAAAGAAAG
TGTCGCAACTGGTAAATCATGTTAAATCAAGAGTTACTGGAGCTTCAAGA
GAAGATTTTTTAACGAAACTTCGCCCTGGATTGCTTGAGTCAGGAAAAGA
AAAGGATAATGTTACACAAAATTCCAATGGGACAACAACCGCATTGAAGC
TTCCTTTAGCAAAATATATTGACTTGACCATATTAGGAGATTCAAGTAAT
GACTCTTCCTCGAAAAACATAGATCAAGAAAAGGATGTACTCAGTCTTTG
GCAACCTAACAAACCTAAAACCGGAAATAGCGTCTCTCCTTTGGGAAAAT
ATATTGATTCAACAATAATGGGAGAATCAAATTCAACAGATTATCGTGCA
CAAAAACGAGGGCCCGGGCAAGGAGGGGCCAGTGACACGACCAAAAGTGA
GAAaaagaaacaatggaaaaatgAGCCACAACTTGAATTGAGTAATGTTG
ACCCAAACAGAGGgaaatttgaaaacatgatGAAAACAGGTTCAAAAAAT
TTCCCTGTTTCTTCACAGAGCGTTAATAATCAACCTcagaattcaaattt
tgaaaattctggaTGGGACAGAGGACATTTGAATCCAAATCGATTTCAAA
TAGACGATGATAGCGAAGCCACTTACACGCTAACAAATGCGGTGCCACAA
TACCCAGGGTTCAACTCCGGTTATTGGTGTGAGCTCGAACAATACACTTT
ACAAGCAATGAAGACATTCTGTAAGGGTGGTGTACCCTATTTGATCACTG
GCGCAACGCCCGGTTTAACGCCCAAAGAACGAGAAATGGATATTGGGACA
AAGTTAAAAGAGAAACAGATTGTGATTCCATTGATGTTGTACACTGCAGC
ATGTTGTGATAAAGGAAAAGAATCATTCTCCTTTGGATTTTATGGTACAA
ACGAAGCAAAACCCAAAATTGGAGTTATCAAGGTCAACGAGTTGATCAGC
ATTGTGAACAAACAGCAAGATCCAACAGATAGAATCATCCTTGATCAATT
CTTCCCTGGAGATGCAGACAACTGCAAAAGTGACCAAGGATCACCAGCAA
TGAACGAGATCAAGACGAAAGTTGAAGAAATGCAAATAAAACGACTTGAG
AATCTGATTTTTGATGAATCTTTACTTAAACCTGAACCAAATAGCAAGGA
TGCTGGGTCATCAGGATCAGGAGGAAGCCAGGCTTCCACCAGTGGGAAGG
GGGCAACAACCAGTGCTAAAGGAGGAAGCAATAAGAGGAAGCTACATGAT
AATGATATAAAGGAGACCGATGAGGATGTAGTCAATCTTGATGTTTTCCA
ATAGAGGATGGAACTCAAAACGCAAATCCAAGCATTGCTCCTTTACATCC
TAGTCGCTCACTCACTTGCCAAGGTATGCCTGGTGAAGGAGGAAAAGAAC
AAGGAGAATGTATTTATGCTTGAGAAAGGTGGCGATTGCCAAGAATGTCA
GCAATTCTTCTACAAGAATGTGTGGCCAAAATTCTCAAGGAACAGTATCA
AATGGCATTTCATTTGTCAGTATTATGAGAATCAACCAAGTTTTTTTACA
TTGTACGATATCAGATATCGAATGCCTTTGTTTTCAGCGTATAGACTGAA
TCTGGGCGCTAAAGAAGCGTCTTGCAATATAGATGAGCCATGTCCTGAAG
CTGCGGGCAACAATGGTTTAGTATCTAGCAGTAGTGGGGCTGGAGCTTCA
GGAACAAGTAATACTAACCAAAAAGTTGGGGAAAAACGGCCACAAACTTC
TAATTCTGGTAAACCAACACCAAACGTAAAAAGACCAAAAATCGAATCAC
CTTCATCGAATCAAGGTTCAAAGGAACAAAAGCCAGGGCTAAGGAGTGAA
GAGAACACCAAAGTCTCTTTTTCAGGCTTGCAAGAGAAATCCTTGTCGTT
AGTGGACCATAGTAACAGGAATAACAAAGGTGACAGTTACCCATTCAAAC
GAACGAAAGAGAAGACGAGTAAAGAAAACTATGAAGAGGAGAATGAAGAT
AGAAAGAAATTACGAAAGGAAGAAGACAAGCGAACAAAACCGGACGCCGA
ACCCTTCGATGATATGGATCGTAGAAGTAGGATTGGCGCTACAGGGCCAG
CACTAAGTGCTCGGATTGGCGTTGCAGGGCCAGCACTAAGTGCTCAAGAT
GACCATGAATCATTACgccttgaagaaaattttgttaaaaagacAAAGTT
GAAACGACGATATGAGGGAGATATTGATGTCGACAGAGTTTCCTTTGATG
ATGATTTCGATCGAAAGAGACGTAGTGAAAATGATGATATTGAATCAACG
GTGGCGAATGCTGGAGAAGTCAATGTCCTTCCTGGCAAGCCTCGTTCTGA
AAAGGAAGTGTCTCAACTGGCAAATTCTATTAAATCAAGAATTACTGAAG
CCTCCAGTGAAGAATCATTGACAAAATTTGGCCCTGGATTGCTGGCAAAC
TTACCTGAGAAACCTAAAAGTGAAAAGATCAACTCAACGGTGGCGAATAC
TGGAGCCAATGTCCTTTCTGATGGGGAATCTGTTAAGAGAAAACGTAAGC
TTAGCAATAATTTTGAATCGGTCTCACAACTGCATACTGTTGCAGGTTAT
CGACGTAGTTTCAATGGAAAGAACTTTACTGTATCTAGCTTGTACGATAA
TTTCATTCAAGATTTTTATGAGAATCACAGCGGCGAGAAGAAAGAAAATA
GTTTTCGCAGTAAAAAGAAGTCAACAAAGGGAAttaaaaaatcacacaaa
aacttTGTAGAGAAAGACCTTCAGCTTGGTAAGCCTCATACTGAAAAGAA
AGTGTCGCAACTGGTAAATCATGTTAAATCAAGAGTTACTGGAGCTTCAA
GAGAAGATTTTTTAACGAAACTTCGCCCTGGATTGCTTGAGTCAGGAAAA
GAAAAGGATAATGTTACACAAAATTCCAATGGGACAACAACCGCATTGAA
GCTTCCTTTAGCAAAATATATTGACTTGACCATATTAGGAGATTCAAGTA
ATGACTCTTCCTCGAAAAACATAGATCAAGAAAAGGATGTACTCAGTCTT
TGGCAACCTAACAAACCTAAAACCGGAAATAGCGTCTCTCCTTTGGGAAA
ATATATTGATTCAACAATAATGGGAGAATCAAATTCAACAGATTATCGTG
CACAAAAACGAGGGCCCGGGCAAGGAGGGGCCAGTGACACGACCAAAAGT
GAGAAaaagaaacaatggaaaaatgAGCCACAACTTGAATTGAGTAATGT
TGACCCAAACAGAGGgaaatttgaaaacatgatGAAAACAGGTTCAAAAA
ATTTCCCTGTTTCTTCACAGAGCGTTAATAATCAACCTcagaattcaaat
tttgaaaattctggaTGGGACAGAGGACATTTGAATCCAAATCGATTTCA
AATAGACGATGATAGCGAAGCCACTTACACGCTAACAAATGCGGTGCCAC
AATACCCAGGGTTCAACTCCGGTTATTGGTGTGAGCTCGAACAATACACT
TTACAAGCAATGAAGACATTCTGTAAGGGTGGTGTACCCTATTTGATCAC
TGGCGCAACGCCCGGTTTAACGCCCAAAGAACGAGAAATGGATATTGGGA
CAAAGTTAAAAGAGAAACAGATTGTGATTCCATTGATGTTGTACACTGCA
GCATGTTGTGATAAAGGAAAAGAATCATTCTCCTTTGGATTTTATGGTAC
AAACGAAGCAAAACCCAAAATTGGAGTTATCAAGGTCAACGAGTTGATCA
GCATTGTGAACAAACAGCAAGATCCAACAGATAGAATCATCCTTGATCAA
TTCTTCCCTGGAGATGCAGACAACTGCAAAAGTGACCAAGGATCACCAGC
AATGAACGAGATCAAGACGAAAGTTGAAGAAATGCAAATAAAACGACTTG
AGAATCTGATTTTTGATGAATCTTTACTTAAACCTGAACCAAATAGCAAG
GATGCTGGGTCATCAGGATCAGGAGGAAGCCAGGCTTCCACCAGTGGGAA
GGGGGCAACAACCAGTGCTAAAGGAGGAAGCAATAAGAGGAAGCTACATG
ATAATGATATAAAGGAGACCGATGAGGATGTAGTCAATCTTGATGTTTTC
CAATAGAGGATGGAACTCAAAACGCAAATCCAAGCATTGCTCCTTTACAT
CCTAGTCGCTCACTCACTTGCCAAGGTATGCCTGGTGAAGGAGGAAAAGA
ACAAGGAGAATGTATTTATGCTTGAGAAAGGTGGCGATTGCCAAGAATGT
CAGCAATTCTTCTACAAGAATGTGTGGCCAAAATTCTCAAGGAACAGTAT
CAAATGGCATTTCATTTGTCAGTATTATGAGAATCAACCAAGTTTTTTTA
CATTGTACGATATCAGATATCGAATGCCTTTGTTTTCAGCGTATAGACTG
AATCTGGGCGCTAAAGAAGCGTCTTGCAATATAGATGAGCCATGTCCTGA
AGCTGCGGGCAACAATGGTTTAGTATCTAGCAGTAGTGGGGCTGGAGCTT
CAGGAACAAGTAATACTAACCAAAAAGTTGGGGAAAAACGGCCACAAACT
TCTAATTCTGGTAAACCAACACCAAACGTAAAAAGACCAAAAATCGAATC
ACCTTCATCGAATCAAGGTTCAAAGGAACAAAAGCCAGGGCTAAGGAGTG
AAGAGAACACCAAAGTCTCTTTTTCAGGCTTGCAAGAGAAATCCTTGTCG
TTAGTGGACCATAGTAACAGGAATAACAAAGGTGACAGTTACCCATTCAA
ACGAACGAAAGAGAAGACGAGTAAAGAAAACTATGAAGAGGAGAATGAAG
ATAGAAAGAAATTACGAAAGGAAGAAGACAAGCGAACAAAACCGGACGCC
GAACCCTTCGATGATATGGATCGTAGAAGTAGGATTGGCGCTACAGGGCC
AGCACTAAGTGCTCGGATTGGCGTTGCAGGGCCAGCACTAAGTGCTCAAG
ATGACCATGAATCATTACgccttgaagaaaattttgttaaaaagacAAAG
TTGAAACGACGATATGAGGGAGATATTGATGTCGACAGAGTTTCCTTTGA
TGATGATTTCGATCGAAAGAGACGTAGTGAAAATGATGATATTGAATCAA
CGGTGGCGAATGCTGGAGAAGTCAATGTCCTTCCTGGCAAGCCTCGTTCT
GAAAAGGAAGTGTCTCAACTGGCAAATTCTATTAAATCAAGAATTACTGA
AGCCTCCAGTGAAGAATCATTGACAAAATTTGGCCCTGGATTGCTGGCAA
ACTTACCTGAGAAACCTAAAAGTGAAAAGATCAACTCAACGGTGGCGAAT
ACTGGAGCCAATGTCCTTTCTGATGGGGAATCTGTTAAGAGAAAACGTAA
GCTTAGCAATAATTTTGAATCGGTCTCACAACTGCATACTGTTGCAGGTT
ATCGACGTAGTTTCAATGGAAAGAACTTTACTGTATCTAGCTTGTACGAT
AATTTCATTCAAGATTTTTATGAGAATCACAGCGGCGAGAAGAAAGAAAA
TAGTTTTCGCAGTAAAAAGAAGTCAACAAAGGGAAttaaaaaatcacaca
aaaacttTGTAGAGAAAGACCTTCAGCTTGGTAAGCCTCATACTGAAAAG
AAAGTGTCGCAACTGGTAAATCATGTTAAATCAAGAGTTACTGGAGCTTC
AAGAGAAGATTTTTTAACGAAACTTCGCCCTGGATTGCTTGAGTCAGGAA
AAGAAAAGGATAATGTTACACAAAATTCCAATGGGACAACAACCGCATTG
AAGCTTCCTTTAGCAAAATATATTGACTTGACCATATTAGGAGATTCAAG
TAATGACTCTTCCTCGAAAAACATAGATCAAGAAAAGGATGTACTCAGTC
TTTGGCAACCTAACAAACCTAAAACCGGAAATAGCGTCTCTCCTTTGGGA
AAATATATTGATTCAACAATAATGGGAGAATCAAATTCAACAGATTATCG
TGCACAAAAACGAGGGCCCGGGCAAGGAGGGGCCAGTGACACGACCAAAA
GTGAGAAaaagaaacaatggaaaaatgAGCCACAACTTGAATTGAGTAAT
GTTGACCCAAACAGAGGgaaatttgaaaacatgatGAAAACAGGTTCAAA
AAATTTCCCTGTTTCTTCACAGAGCGTTAATAATCAACCTcagaattcaa
attttgaaaattctggaTGGGACAGAGGACATTTGAATCCAAATCGATTT
CAAATAGACGATGATAGCGAAGCCACTTACACGCTAACAAATGCGGTGCC
ACAATACCCAGGGTTCAACTCCGGTTATTGGTGTGAGCTCGAACAATACA
CTTTACAAGCAATGAAGACATTCTGTAAGGGTGGTGTACCCTATTTGATC
ACTGGCGCAACGCCCGGTTTAACGCCCAAAGAACGAGAAATGGATATTGG
GACAAAGTTAAAAGAGAAACAGATTGTGATTCCATTGATGTTGTACACTG
CAGCATGTTGTGATAAAGGAAAAGAATCATTCTCCTTTGGATTTTATGGT
ACAAACGAAGCAAAACCCAAAATTGGAGTTATCAAGGTCAACGAGTTGAT
CAGCATTGTGAACAAACAGCAAGATCCAACAGATAGAATCATCCTTGATC
AATTCTTCCCTGGAGATGCAGACAACTGCAAAAGTGACCAAGGATCACCA
GCAATGAACGAGATCAAGACGAAAGTTGAAGAAATGCAAATAAAACGACT
TGAGAATCTGATTTTTGATGAATCTTTACTTAAACCTGAACCAAATAGCA
AGGATGCTGGGTCATCAGGATCAGGAGGAAGCCAGGCTTCCACCAGTGGG
AAGGGGGCAACAACCAGTGCTAAAGGAGGAAGCAATAAGAGGAAGCTACA
TGATAATGATATAAAGGAGACCGATGAGGATGTAGTCAATCTTGATGTTT
TCCAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002090XLOC_002090Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003751-exon-sc0000031-1491911889:504985..507082TCONS_00003751-exon-sc0000031-1491911889:504985..507082Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1510915933:504985..507082TCONS_00003751-exon-sc0000031-1510915933:504985..507082Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1575043694:504985..507082TCONS_00003751-exon-sc0000031-1575043694:504985..507082Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1491911889:507672..507890TCONS_00003751-exon-sc0000031-1491911889:507672..507890Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1510915933:507672..507890TCONS_00003751-exon-sc0000031-1510915933:507672..507890Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1575043694:507672..507890TCONS_00003751-exon-sc0000031-1575043694:507672..507890Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1491911889:508710..508823TCONS_00003751-exon-sc0000031-1491911889:508710..508823Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1510915933:508710..508823TCONS_00003751-exon-sc0000031-1510915933:508710..508823Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1575043694:508710..508823TCONS_00003751-exon-sc0000031-1575043694:508710..508823Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1491911889:509514..510037TCONS_00003751-exon-sc0000031-1491911889:509514..510037Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1510915933:509514..510037TCONS_00003751-exon-sc0000031-1510915933:509514..510037Clytia hemisphaericaexon
TCONS_00003751-exon-sc0000031-1575043694:509514..510037TCONS_00003751-exon-sc0000031-1575043694:509514..510037Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003751-proteinTCONS_00003751-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:504985..510037 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0125988 0 0 0 0 0.714248 0.63757 0.283069 0.229256 3.2331 3.55366 7.12322 5.47007 4.56317 13.9115 1.33844 2.2069 0.0412021 0.0574867 0.936869 1.13329 0.296272 0.444434 0.818413 0.742794 0.389743 0.151252 0.0286799 0.0146101
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001604DNA/RNA_non-sp_Endonuclease
IPR020821Extracellular_endonuc_su_A
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003676nucleic acid binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003751 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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