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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00003751-protein ID=TCONS_00003751-protein|Name=TCONS_00003751-protein|organism=Clytia hemisphaerica|type=polypeptide|length=933bp
RMELKTQIQALLLYILVAHSLAKVCLVKEEKNKENVFMLEKGGDCQECQQ
FFYKNVWPKFSRNSIKWHFICQYYENQPSFFTLYDIRYRMPLFSAYRLNL
GAKEASCNIDEPCPEAAGNNGLVSSSSGAGASGTSNTNQKVGEKRPQTSN
SGKPTPNVKRPKIESPSSNQGSKEQKPGLRSEENTKVSFSGLQEKSLSLV
DHSNRNNKGDSYPFKRTKEKTSKENYEEENEDRKKLRKEEDKRTKPDAEP
FDDMDRRSRIGATGPALSARIGVAGPALSAQDDHESLRLEENFVKKTKLK
RRYEGDIDVDRVSFDDDFDRKRRSENDDIESTVANAGEVNVLPGKPRSEK
EVSQLANSIKSRITEASSEESLTKFGPGLLANLPEKPKSEKINSTVANTG
ANVLSDGESVKRKRKLSNNFESVSQLHTVAGYRRSFNGKNFTVSSLYDNF
IQDFYENHSGEKKENSFRSKKKSTKGIKKSHKNFVEKDLQLGKPHTEKKV
SQLVNHVKSRVTGASREDFLTKLRPGLLESGKEKDNVTQNSNGTTTALKL
PLAKYIDLTILGDSSNDSSSKNIDQEKDVLSLWQPNKPKTGNSVSPLGKY
IDSTIMGESNSTDYRAQKRGPGQGGASDTTKSEKKKQWKNEPQLELSNVD
PNRGKFENMMKTGSKNFPVSSQSVNNQPQNSNFENSGWDRGHLNPNRFQI
DDDSEATYTLTNAVPQYPGFNSGYWCELEQYTLQAMKTFCKGGVPYLITG
ATPGLTPKEREMDIGTKLKEKQIVIPLMLYTAACCDKGKESFSFGFYGTN
EAKPKIGVIKVNELISIVNKQQDPTDRIILDQFFPGDADNCKSDQGSPAM
NEIKTKVEEMQIKRLENLIFDESLLKPEPNSKDAGSSGSGGSQASTSGKG
ATTSAKGGSNKRKLHDNDIKETDEDVVNLDVFQ Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001604 | DNA/RNA_non-sp_Endonuclease |
| IPR020821 | Extracellular_endonuc_su_A |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
| GO:0003676 | nucleic acid binding |
| GO:0046872 | metal ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0016787 |
hydrolase activity |
| molecular_function |
GO:0046872 |
metal ion binding |
| molecular_function |
GO:0003676 |
nucleic acid binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 219..243 |
| None | No IPR available | GENE3D | 3.40.570.10 | | coord: 45..260
e-value: 3.2E-4
score: 19.6
coord: 557..828
e-value: 1.5E-26
score: 92.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 874..933 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 579..653 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 118..268 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 461..481 |
| None | No IPR available | SUPERFAMILY | 54060 | His-Me finger endonucleases | coord: 676..807
coord: 630..648 |
| IPR001604 | DNA/RNA non-specific endonuclease | SMART | SM00892 | Endonuclease_NS_2 | coord: 588..840
e-value: 7.8E-9
score: 45.4 |
| IPR001604 | DNA/RNA non-specific endonuclease | PFAM | PF01223 | Endonuclease_NS | coord: 665..789
e-value: 6.5E-16
score: 58.7 |
| IPR020821 | Extracellular Endonuclease, subunit A | SMART | SM00477 | endoplus | coord: 625..824
e-value: 4.4E-5
score: -25.6 |
Blast
The following BLAST results are available for this feature:
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