XLOC_002090 (gene) - C. hemisphaerica

Overview
NameXLOC_002090
Unique NameXLOC_002090
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000031:504985..510037+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002090 ID=XLOC_002090|Name=XLOC_002090|organism=Clytia hemisphaerica|type=gene|length=5053bp|location=Sequence derived from alignment at sc0000031:504985..510037+ (Clytia hemisphaerica)
GAGGATGGAACTCAAAACGCAAATCCAAGCATTGCTCCTTTACATCCTAG TCGCTCACTCACTTGCCAAGGTATGCCTGGTGAAGGAGGAAAAGAACAAG GAGAATGTATTTATGCTTGAGAAAGGTGGCGATTGCCAAGAATGTCAGCA ATTCTTCTACAAGAATGTGTGGCCAAAATTCTCAAGGAACAGTATCAAAT GGCATTTCATTTGTCAGTATTATGAGAATCAACCAAGTTTTTTTACATTG TACGATATCAGATATCGAATGCCTTTGTTTTCAGCGTATAGACTGAATCT GGGCGCTAAAGAAGCGTCTTGCAATATAGATGAGCCATGTCCTGAAGCTG CGGGCAACAATGGTTTAGTATCTAGCAGTAGTGGGGCTGGAGCTTCAGGA ACAAGTAATACTAACCAAAAAGTTGGGGAAAAACGGCCACAAACTTCTAA TTCTGGTAAACCAACACCAAACGTAAAAAGACCAAAAATCGAATCACCTT CATCGAATCAAGGTTCAAAGGAACAAAAGCCAGGGCTAAGGAGTGAAGAG AACACCAAAGTCTCTTTTTCAGGCTTGCAAGAGAAATCCTTGTCGTTAGT GGACCATAGTAACAGGAATAACAAAGGTGACAGTTACCCATTCAAACGAA CGAAAGAGAAGACGAGTAAAGAAAACTATGAAGAGGAGAATGAAGATAGA AAGAAATTACGAAAGGAAGAAGACAAGCGAACAAAACCGGACGCCGAACC CTTCGATGATATGGATCGTAGAAGTAGGATTGGCGCTACAGGGCCAGCAC TAAGTGCTCGGATTGGCGTTGCAGGGCCAGCACTAAGTGCTCAAGATGAC CATGAATCATTACgccttgaagaaaattttgttaaaaagacAAAGTTGAA ACGACGATATGAGGGAGATATTGATGTCGACAGAGTTTCCTTTGATGATG ATTTCGATCGAAAGAGACGTAGTGAAAATGATGATATTGAATCAACGGTG GCGAATGCTGGAGAAGTCAATGTCCTTCCTGGCAAGCCTCGTTCTGAAAA GGAAGTGTCTCAACTGGCAAATTCTATTAAATCAAGAATTACTGAAGCCT CCAGTGAAGAATCATTGACAAAATTTGGCCCTGGATTGCTGGCAAACTTA CCTGAGAAACCTAAAAGTGAAAAGATCAACTCAACGGTGGCGAATACTGG AGCCAATGTCCTTTCTGATGGGGAATCTGTTAAGAGAAAACGTAAGCTTA GCAATAATTTTGAATCGGTCTCACAACTGCATACTGTTGCAGGTTATCGA CGTAGTTTCAATGGAAAGAACTTTACTGTATCTAGCTTGTACGATAATTT CATTCAAGATTTTTATGAGAATCACAGCGGCGAGAAGAAAGAAAATAGTT TTCGCAGTAAAAAGAAGTCAACAAAGGGAAttaaaaaatcacacaaaaac ttTGTAGAGAAAGACCTTCAGCTTGGTAAGCCTCATACTGAAAAGAAAGT GTCGCAACTGGTAAATCATGTTAAATCAAGAGTTACTGGAGCTTCAAGAG AAGATTTTTTAACGAAACTTCGCCCTGGATTGCTTGAGTCAGGAAAAGAA AAGGATAATGTTACACAAAATTCCAATGGGACAACAACCGCATTGAAGCT TCCTTTAGCAAAATATATTGACTTGACCATATTAGGAGATTCAAGTAATG ACTCTTCCTCGAAAAACATAGATCAAGAAAAGGATGTACTCAGTCTTTGG CAACCTAACAAACCTAAAACCGGAAATAGCGTCTCTCCTTTGGGAAAATA TATTGATTCAACAATAATGGGAGAATCAAATTCAACAGATTATCGTGCAC AAAAACGAGGGCCCGGGCAAGGAGGGGCCAGTGACACGACCAAAAGTGAG AAaaagaaacaatggaaaaatgAGCCACAACTTGAATTGAGTAATGTTGA CCCAAACAGAGGgaaatttgaaaacatgatGAAAACAGGTTCAAAAAATT TCCCTGTTTCTTCACAGAGCGTTAATAATCAACCTcagaattcaaatttt gaaaattctggaTGGGACAGAGGACATTTGAATCCAAATCGATTTCAAGT AAGTAcacgtatttttataagaataaactataagaagataaggcttcgat gaccaaaatgttaagaacaagttttagaacattttaatgctGCGTGGACc ataaaacacctgatttcttagaaaaatggacagaGATATACtctaaaaat ggtgaaaatacgaacatgttaagaacatctttaggcttaaaactccaaaa cttaaaaacatccgaaggcttcagaaattgtggatgttcttatgagaaaa aaaattttactctAATCTTCAGAATGCGTTCCCGTCAgggaacaaaacaa aaccctcttaaaatactctctctataattcgaatctctcttttattcgaa aaaataagattccccgttcgacGTTCGATTTAGTGAGAGTCAAAAAATGG ACGGGTTACGAATGGAATGGTattacccagctgacacacaacatcgtttc aacgtttttctaatattcacaacgttcatataacgttaaatgaacgttga aacaacgctgtgtgTCAGCTCGGTACGTTATTAACGACATCCGGTCAATA CCATTTCCAATATTCCATCCGTAATTTTGTTTTATAGATAGACGATGATA GCGAAGCCACTTACACGCTAACAAATGCGGTGCCACAATACCCAGGGTTC AACTCCGGTTATTGGTGTGAGCTCGAACAATACACTTTACAAGCAATGAA GACATTCTGTAAGGGTGGTGTACCCTATTTGATCACTGGCGCAACGCCCG GTTTAACGCCCAAAGAACGAGAAATGGATATTGGGACAAAGTTAAAAGAG AAACAGGTAACActaaatatattgagaatttaggtCAGaaggaaaaatca attttctagtttccaccctgaaaattgtctaATCTAAATAACCAAAactc gaccctgtcagatacgcattttgaaaaattagtaaatttggcaCCTTACC ACATATCTTCAGAACCTAAAAAAAGGACTCTaaccagcggcacatccccg tacccaattttctGCGTGATCCCTGCTCAATATAACAACAAATATCTAAt catataaaacactagatcgAGTTATTCTGTCCCTTCTTGAAGCTTAACAA TGCGCCACCTTTAAAAGTAGACTACAGTTCGTTGCCCGCAATTTGACCAA TCAACGCCATTCTCTTGCCTCTTCGTTTCTTGCTATGTCGCTGTTTGTCA cattgaacaaattgccggtgCCGAACTATAATTTACTACTGTGTAGTCCA CTCAGCAAAAACGGCGCGTTATTTTACTTCAACTTAGCTGTGGTTTGAGA AAGACAGCAtgagctctatctagtgttttatataagataccCGTATGTAA TCTAGCACGTTTGAAACAAGGTTGTGAGTGCGGATCTCTTTCACGTCGAA TATTTGTATTCTAgtgtcgatattttacgtggatagcccagtaatctagg acttttagacagtctttcgattgttttcacggggtccacggccagctgGC ATAgttatctatgaactgaacggaacattggaaggagcggggattcgaac cgtgAATCCCTGGTtttgagacgctgacgcctttgaccacttggccatcg cttcATAATATGTTTTCTATTTCAGATTGTGATTCCATTGATGTTGTACA CTGCAGCATGTTGTGATAAAGGAAAAGAATCATTCTCCTTTGGATTTTAT GGTACAAACGAAGCAAAACCCAAAATTGGAGTTATCAAGGTTAGACTcga gcccagctggcacacaacgttatttcaacgttcattttatgtccacaacg tccatataacgttagatgaacgttaagaCAACGTCGTGTACCTGCTGGGA TTTTaaccttttcttttccttttgaaaaaacgTTTTCCTTTACGGAATAG CTATTTTCATTATATCACAACTAGGTaccagtttgcagagtgtggcacgt ttgctcgagatctcgagtgcacaactcggaaaaagtcgagtgcaggtgca aaatttgagcttttCAGACGGATTTTTAACCTCCATTGCAGAGTTCAGCT ATTTTTTCCTCAAGTGcagctaattttagcaatttttgcctttttgggcG AATTTCTGAGTTATAAGTGCACTTTTTccggaccaaaatttatcaggtcC GTTCTTCCATTACAGAACTTGGTATTACCGAATTTTTCCTCGAGTACAGC cttgccatactctgcaaactaGGGCACAGAATATAATCGAGACAGGGATG AAACTACTATCGGTATTCGAATCTCAAAAGTTCAGTAGATTGTAAATAGT CTCGTCAGTAAATACCATCCGGATAATCATAATATATTTATTTGTCTCGC TATCGAACACAACGTGCTCAAACTGTCAAAAATGGCTTGTAAAAAGAATT TATCAATCTTTCTTCTCACACAACAACAGGTCAACGAGTTGATCAGCATT GTGAACAAACAGCAAGATCCAACAGATAGAATCATCCTTGATCAATTCTT CCCTGGAGATGCAGACAACTGCAAAAGTGACCAAGGATCACCAGCAATGA ACGAGATCAAGACGAAAGTTGAAGAAATGCAAATAAAACGACTTGAGAAT CTGATTTTTGATGAATCTTTACTTAAACCTGAACCAAATAGCAAGGATGC TGGGTCATCAGGATCAGGAGGAAGCCAGGCTTCCACCAGTGGGAAGGGGG CAACAACCAGTGCTAAAGGAGGAAGCAATAAGAGGAAGCTACATGATAAT GATATAAAGGAGACCGATGAGGATGTAGTCAATCTTGATGTTTTCCAATA GATGTACTAAAATCTCAATTATTAACCATTTTTGTATATAATCTACACAA TCCGAACAATAGGCCTCAGAACTCTATTGAACCCTTATGAACCCTAAAAA TCCTTTAATCTTCCAACCTTAACTGGCTTTCAAGTGGAGCGGTTACCGGT AAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003751TCONS_00003751Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003751-proteinTCONS_00003751-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:504985..510037 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.01 0 0 0 0 0.71 0.64 0.28 0.23 3.23 3.55 7.12 5.47 4.56 13.91 1.34 2.21 0.04 0.06 0.94 1.13 0.3 0.44 0.82 0.74 0.39 0.15 0.03 0.01