TCONS_00003078 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003078
Unique NameTCONS_00003078
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2369

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003078 ID=TCONS_00003078|Name=TCONS_00003078|organism=Clytia hemisphaerica|type=transcript|length=2369bp
CTTCTTTCTATCGAGAAAAAAGAATGAAGACgtttattgttgttgttgtg
tacAATATTACTAAAGGGAATGATTTTCTTATGACAAAACTTTCGATATT
GTGATGTTTTCGTATGGTGGTGAATATGAGTGAAAAATAAACATGGTCTC
ATTAGTTGATGGTCATCActtcttgttgttttattttggtCAACCATTTT
GTCTGACTGTGCTTTGTTTTTCTATTCTTTGTTGAcgtatttttcctctt
ttacTTTGAGGTATTAATCCAGAGAATGGGAGATTTGAAactgtttggtg
tttttgggtCGATTTCTGAGTCCTTTGATTATCGTTATCAgtaacatttt
cttcttttaacgTGAGTTTAAAGACCTTGGTTtggatgaaataaaaaatt
gtgagtgtcaAAAAAATGAGTGGTATTTTTCGTTTGCTGCTTGTATTGAT
TTCATTGGTTATTTCAGATTTTGCAGAAGCGGAGAAGAAAGTCTTGATTG
TTCGGCGGAATAACACTTTCGACACATGGACAGAACCTGATGGAGGGTGT
GCAAACTGCGCATGTCGAAAACACTCTTCATATATGGTCACCAAATCGAA
CAAAAGATCGTGTTTCGATAATGATGATGTCAGCACAATTTATGGTAAAG
ATTCGATTCTGACTTCTAAAGAAGGTCAAGCTATATTCTATGCAACATCG
GAACGAAAATACAAATCATGGATTGTAAAGAATACCTTTGAATTATATTC
TTCTGAAGGAAAACAAATCACATCTTCGAATTGTCAGAATGTAGAAATAT
CAAAAGTTAATGTTATGAATTTCGATTATTGGCAACCCTGGATtactaaa
aagaaaattggCGACCATTTTCGATTGCTAAAATTAGGAAAATTATCTGC
AATTAGTATTATGATACCTTTGACGAATTACGCAACGTTGCGCGGCCATT
TGGTGAACATCGTAGTCAGTTGTGGTAATGCAAAAGAGGTTCACAAAGCG
TTCAATGtctttgttaaatttggagGTCAAAGAAATTATACCAAAGGTGA
AATCATCAAACAACTCCCTTCTTCAAAATCGACGACCAATGACGATGATG
AATCCTCGCTGAACCAAAATTCAAAGAATACACCAAAGACATCAAGTTTA
ACGATGATAGTGATTGGTGCATCATTGGGAGGCGTTGCTTTTCTTGTTAT
CATCGTCGCTATCATTCTATTCATACTCAATAAACGACTGAAGGAGCAAC
ATATGGCCGTCATTAAAAAGCAAGAGAATGGGCTTACTTTGGATGGCTCA
AGAGTGATTGTCAACAAAGATGTATTAGAACTGGCGCACGAAATCATCCA
AGAACGagctgaaaaaatgaaaagcagACCAGATATTATTCCAGAGCAAG
AAAAGGAATTAGAgttcaaattcaaaatggcgaaaGACTTATATCAATTA
ACTGATAACTACTCTATTGACTCTGCATATGAAAAAGCTATCGATCCGGT
AAAATCCCGGGAAAATGCAGCAAATGATACGGAACTTTCTTTAGATACAA
ATACTGGGTCATTAGAGCGAATGTCATCTATGAAAGGATCGTATACAGAA
ATCATTCTAGATCCAAAAGAACCTTTAAACGTAAGACAGTCTGTAATCTA
TGAACCAGTTATTGATGAGAAATCAGGATATAGTGAACCGAACCATGATG
TTTTGATCGAGAGACCGTATCAAGGGATATATTTACAACCAGTAGATGGC
GGGGGCGGTAGTGTGGGCgtaataaaagaagaagatgaTGGGCAAAGCAG
TGACGAGGATGCAAATTATGAAGAATTCCAAGGATGAAATACGTTCACGT
GTTCAAATGATCGACTATAAGAAAATCTTGTAAAATATGACGAAATCTTC
GcggtagcgtagacaagaggggtgtaaaatttgcgTAGGAGAGCAGACTT
TTATGACACATTacttatctttttatattatgaatagataattactgtat
cataaaaatctgctctcctacacatattttgcgcccctcctatCAACTGC
TTCGACCGAAACTTTACtccaaattttcttccaaacacAGTATGTAATTA
TAAGAAAGACCGAATTTTTCGTCACCGTATCATGGACCTTTacataagat
attcttttgTAGAAATTACGAATTCTAAAGTAAATATGAATACCCTAAAT
AGAAAAACTATAAAGAAAACttcaatgaaaaatatattcttaaaatttcg
attttcgttTTGACTTGTTACTCATACCTCATATAGAATATCTAAAAGCT
CATGGTATCGTACAATGTTATCTTTCCAATTAActctttatctgatattc
cgatggcggattggcgacG
Run BLAST on NCBI

protein sequence of TCONS_00003078-protein

>TCONS_00003078-protein ID=TCONS_00003078-protein|Name=TCONS_00003078-protein|organism=Clytia hemisphaerica|type=polypeptide|length=473bp
MSGIFRLLLVLISLVISDFAEAEKKVLIVRRNNTFDTWTEPDGGCANCAC
RKHSSYMVTKSNKRSCFDNDDVSTIYGKDSILTSKEGQAIFYATSERKYK
SWIVKNTFELYSSEGKQITSSNCQNVEISKVNVMNFDYWQPWITKKKIGD
HFRLLKLGKLSAISIMIPLTNYATLRGHLVNIVVSCGNAKEVHKAFNVFV
KFGGQRNYTKGEIIKQLPSSKSTTNDDDESSLNQNSKNTPKTSSLTMIVI
GASLGGVAFLVIIVAIILFILNKRLKEQHMAVIKKQENGLTLDGSRVIVN
KDVLELAHEIIQERAEKMKSRPDIIPEQEKELEFKFKMAKDLYQLTDNYS
IDSAYEKAIDPVKSRENAANDTELSLDTNTGSLERMSSMKGSYTEIILDP
KEPLNVRQSVIYEPVIDEKSGYSEPNHDVLIERPYQGIYLQPVDGGGGSV
GVIKEEDDGQSSDEDANYEEFQG
Run BLAST on NCBI

transcript from alignment at sc0000025:114326..118708+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003078 ID=TCONS_00003078|Name=TCONS_00003078|organism=Clytia hemisphaerica|type=transcript|length=4383bp|location=Sequence derived from alignment at sc0000025:114326..118708+ (Clytia hemisphaerica)
CTTCTTTCTATCGAGAAAAAAGAATGAAGACgtttattgttgttgttgtg
tacAATATTACTAAAGGGAATGATTTTCTTATGACAAAACTTTCGATATT
GTGATGTTTTCGTATGGTGGTGAATATGAGTGAAAAATAAACATGGTCTC
ATTAGTTGATGGTCATCActtcttgttgttttattttggtCAACCATTTT
GTCTGACTGTGCTTTGTTTTTCTATTCTTTGTTGAcgtatttttcctctt
ttacTTTGAGGTATTAATCCAGAGAATGGGAGATTTGAAactgtttggtg
tttttgggtCGATTTCTGAGTCCTTTGATTATCGTTATCAgtaacatttt
cttcttttaacgTGAGTTTAAAGACCTTGGTTtggatgaaataaaaaatt
gtgagtgtcaAAAAAATGAGTGGTATTTTTCGTTTGCTGCTTGTATTGAT
TTCATTGGTTATTTCAGATTTTGCAGAAGCGGAGAAGGTATGTCATATTT
GAATTTTATTATAGAAGTTTTCCAAGTCTGAAGTCCATGAAATTTTAGCA
TGATCATCCGTATGAGGATGAAGTCCGTATAATTCCGAAGAAATCAATGT
AAAAAGTATATGAACAGGATACAATATGTTTTGGAAAATCCCGATGTACA
ACtatcatcaaaatttcatttttgcagAAAGTCTTGATTGTTCGGCGGAA
TAACACTTTCGACACATGGACAGAACCTGATGGAGGGTGTGCAAACTGCG
CATGTCGAAAACACTCTTCATATATGGTCACCAAATCGAACAAAAGATCG
TGTTTCGATAATGATGATGTCAGCACAATTTATGGTACGAtttcttcttt
cattttaagAAATTTCTCAAATGCTCTTGAACAAATTTTCTCtgcaattt
tgttttttaaattctagcaaaaatattgcaaaaatatCAAGACAAGTCTT
TGGATgtccttaactttttgggttttaagcttCAAAATGTACATATTCAC
CTCTTTCTGaatatttttgcctattttcctaagaaatcgggtctTTTAGA
GACtacaaagccttagaatgttcttaacttgttcttaatatttatgTAAA
GATGGAAAAAAATGTTCCTTTTGTAAtagtttttgaactttttgcttGTC
GGAGAAATCTTTGGGCCATAAACCTTAAATTACTTTTTCAATACTGTAGG
TAAAGATTCGATTCTGACTTCTAAAGAAGGTCAAGCTATATTCTATGCAA
CATCGGAACGAAAATACAAATCATGGATTGTAAAGAATACCTTTGAATTA
TATTCTTCTGAAGGAAAACAAATCACATCTTCGAATTGTCAGAATGTAGA
AATATCAAAAGTTAATGTTATGAATTTCGATTATTGGCAACCCTGGATta
ctaaaaagaaaattggCGACCATTTTCGATTGCTAAAATTAGGAAAATTA
TCTGCAATTAGTATTATGGTATGTCTTGACTCTAAAATATTTGtggttga
aaatttcaattaaacATTATCGATTTCGAATGCAGTTGGTTTATTTGCCG
GTTTCAGTTTCCaggtcttttttttattttttttatttttgtcaaaaagc
aTGTGACAGTGTTTTCAGTAGAATAAATGTGTCCTTTTCAATATTTGCAT
TATCtttcattgattttaaaatctctatttGAAGTTTCTATTTTAAATTA
TATCATAACCTGCAACTAGATACCTTTGACGAATTACGCAACGTTGCGCG
GCCATTTGGTGAACATCGTAGTCAGTTGTGGTAATGCAAAAGAGGTTCAC
AAAGCGTTCAATGtctttgttaaatttggagGTCAAAGAAATTGTAAGTA
TAAACAACAAATATTACACCGAATAAAAAAATTCCGACCAAATGACAAAT
GACTAGATTTAAATCCAGAACATGGGCGGTTGCTCTGAGAGGAAATACTC
GATTCGAAAAGGACTATACACCCGCACCCAAAACGTGTCTAAAGTAATAG
ATCTCATACCCCTTCTCCATCTTCTTCTGAGACAGGGAGTGTAACCTATT
TCAAAAGGTTAGTATCTCTAAACTCCTCTTCACAAGTAGAGATGAaactt
taagaacaaattcacCTATCATAGATACCAAAGGTGAAATCATCAAACAA
CTCCCTTCTTCAAAATCGACGACCAATGACGATGATGAATCCTCGCTGAA
CCAAAATTCAAAGAATACACCAAAGACATCAAGTTTAACGATGATAGTGA
TTGGTGCATCATTGGGAGGCGTTGCTTTTCTTGTTATCATCGTCGCTATC
ATTCTATTCATACTCAATAAACGGTAGGTGTCGAAATTTTATTTGAACGA
TACCACATTGATTTCATCAAATTCGTCGGTTTCTTTATCTATATAAACTA
ACTTTCCCACTTGTACTGAAGAGAGGAGGCTTCTATATTCCCGTACTCCT
AAAATTCCCAATATGCAAATATGCATGAGTTTTTTTGCCGCTATACTTCA
GCCTcgtaaaaaacaagcaaacatattttccttttgtttAAGAATGTATT
GCTTTGTCAGGAGAAAAACAGAATCAAAGACCAACTTATCCATCTCTACT
TGAGTCTCATAATCAGTTTCTCTATTTTCATGCCTAAATCTCATGCCTAA
AGGCTAgataaaaactttgatttttcttttgttataatttaGACTGAAGG
AGCAACATATGGCCGTCATTAAAAAGCAAGAGGTATGTATGTCAATTTTC
GAAAGTTAccttgaaaaatatttgcatTATTCTTTTCGTTGGCATTGTTG
TCTGTTACTGGGAAGTATATTTGTAGCCTTTCAATTCAAATGAAAGATTG
CTGATTCGACGTCCTCGAAACTGAAGGAGTTAGAAGTGAAACTTTCAATC
TAACGGTCATGTACTATATATTAGAGTGTAGAGCATTATTTTCTAAATCA
GGCATTCATCTGAAAAATAACACAGGTTGTCAAAGATgcttcttttctat
tttctatagaGTAATATCTAACACTAACCTTTTTATCTCGTTATAGAATG
GGCTTACTTTGGATGGCTCAAGAGGTAAATATTACAGTTCTAATGTACTA
AGAAAAGGTGAAGAACCTCATGAATGGAAGAAAAAGTATATTTTGCTACG
ACCTCCCCGGATCTGCCGGTTCTCTTAAAGAGTATTGCTAGTTGAATTAA
CAGAATTTTAGTTCTAGAGAAAGCTTTTTTGCTAAAGAGTGATGATTATT
TTGAAAGATTCTTGCCGTTAactttgagacaggggtgtttttgaATCCAT
TTTCATTCTATCACTCAGTGATTGTCAACAAAGATGTATTAGAACTGGCG
CACGAAATCATCCAAGAACGagctgaaaaaatgaaaagcagACCAGATAT
TATTCCAGAGCAAGAAAAGGAATTAGAgttcaaattcaaaatggcgaaaG
ACTTATATCAATTAACTGATAACTACTCTATTGACTCTGCATATGAAAAA
GCTATCGATCCGGTAAAATCCCGGGAAAATGCAGCAAATGATACGGAACT
TTCTTTAGATACAAATACTGGGTCATTAGAGCGAATGTCATCTATGAAAG
GATCGTATACAGAAATCATTCTAGATCCAAAAGAACCTTTAAACGTAAGA
CAGTCTGTAATCTATGAACCAGTTATTGATGAGAAATCAGGATATAGTGA
ACCGAACCATGATGTTTTGATCGAGAGACCGTATCAAGGGATATATTTAC
AACCAGTAGATGGCGGGGGCGGTAGTGTGGGCgtaataaaagaagaagat
gaTGGGCAAAGCAGTGACGAGGATGCAAATTATGAAGAATTCCAAGGATG
AAATACGTTCACGTGTTCAAATGATCGACTATAAGAAAATCTTGTAAAAT
ATGACGAAATCTTCGcggtagcgtagacaagaggggtgtaaaatttgcgT
AGGAGAGCAGACTTTTATGACACATTacttatctttttatattatgaata
gataattactgtatcataaaaatctgctctcctacacatattttgcgccc
ctcctatCAACTGCTTCGACCGAAACTTTACtccaaattttcttccaaac
acAGTATGTAATTATAAGAAAGACCGAATTTTTCGTCACCGTATCATGGA
CCTTTacataagatattcttttgTAGAAATTACGAATTCTAAAGTAAATA
TGAATACCCTAAATAGAAAAACTATAAAGAAAACttcaatgaaaaatata
ttcttaaaatttcgattttcgttTTGACTTGTTACTCATACCTCATATAG
AATATCTAAAAGCTCATGGTATCGTACAATGTTATCTTTCCAATTAActc
tttatctgatattccgatggcggattggcgacG

Coding sequence (CDS) from alignment at sc0000025:114326..118708+

>TCONS_00003078 ID=TCONS_00003078|Name=TCONS_00003078|organism=Clytia hemisphaerica|type=CDS|length=11376bp|location=Sequence derived from alignment at sc0000025:114326..118708+ (Clytia hemisphaerica)
ATGAGTGGTATTTTTCGTTTGCTGCTTGTATTGATTTCATTGGTTATTTC
AGATTTTGCAGAAGCGGAGAAGAAAGTCTTGATTGTTCGGCGGAATAACA
CTTTCGACACATGGACAGAACCTGATGGAGGGTGTGCAAACTGCGCATGT
CGAAAACACTCTTCATATATGGTCACCAAATCGAACAAAAGATCGTGTTT
CGATAATGATGATGTCAGCACAATTTATGGTAAAGATTCGATTCTGACTT
CTAAAGAAGGTCAAGCTATATTCTATGCAACATCGGAACGAAAATACAAA
TCATGGATTGTAAAGAATACCTTTGAATTATATTCTTCTGAAGGAAAACA
AATCACATCTTCGAATTGTCAGAATGTAGAAATATCAAAAGTTAATGTTA
TGAATTTCGATTATTGGCAACCCTGGATtactaaaaagaaaattggCGAC
CATTTTCGATTGCTAAAATTAGGAAAATTATCTGCAATTAGTATTATGAT
ACCTTTGACGAATTACGCAACGTTGCGCGGCCATTTGGTGAACATCGTAG
TCAGTTGTGGTAATGCAAAAGAGGTTCACAAAGCGTTCAATGtctttgtt
aaatttggagGTCAAAGAAATTATACCAAAGGTGAAATCATCAAACAACT
CCCTTCTTCAAAATCGACGACCAATGACGATGATGAATCCTCGCTGAACC
AAAATTCAAAGAATACACCAAAGACATCAAGTTTAACGATGATAGTGATT
GGTGCATCATTGGGAGGCGTTGCTTTTCTTGTTATCATCGTCGCTATCAT
TCTATTCATACTCAATAAACGACTGAAGGAGCAACATATGGCCGTCATTA
AAAAGCAAGAGAATGGGCTTACTTTGGATGGCTCAAGAGTGATTGTCAAC
AAAGATGTATTAGAACTGGCGCACGAAATCATCCAAGAACGagctgaaaa
aatgaaaagcagACCAGATATTATTCCAGAGCAAGAAAAGGAATTAGAgt
tcaaattcaaaatggcgaaaGACTTATATCAATTAACTGATAACTACTCT
ATTGACTCTGCATATGAAAAAGCTATCGATCCGGTAAAATCCCGGGAAAA
TGCAGCAAATGATACGGAACTTTCTTTAGATACAAATACTGGGTCATTAG
AGCGAATGTCATCTATGAAAGGATCGTATACAGAAATCATTCTAGATCCA
AAAGAACCTTTAAACGTAAGACAGTCTGTAATCTATGAACCAGTTATTGA
TGAGAAATCAGGATATAGTGAACCGAACCATGATGTTTTGATCGAGAGAC
CGTATCAAGGGATATATTTACAACCAGTAGATGGCGGGGGCGGTAGTGTG
GGCgtaataaaagaagaagatgaTGGGCAAAGCAGTGACGAGGATGCAAA
TTATGAAGAATTCCAAGGATGAATGAGTGGTATTTTTCGTTTGCTGCTTG
TATTGATTTCATTGGTTATTTCAGATTTTGCAGAAGCGGAGAAGAAAGTC
TTGATTGTTCGGCGGAATAACACTTTCGACACATGGACAGAACCTGATGG
AGGGTGTGCAAACTGCGCATGTCGAAAACACTCTTCATATATGGTCACCA
AATCGAACAAAAGATCGTGTTTCGATAATGATGATGTCAGCACAATTTAT
GGTAAAGATTCGATTCTGACTTCTAAAGAAGGTCAAGCTATATTCTATGC
AACATCGGAACGAAAATACAAATCATGGATTGTAAAGAATACCTTTGAAT
TATATTCTTCTGAAGGAAAACAAATCACATCTTCGAATTGTCAGAATGTA
GAAATATCAAAAGTTAATGTTATGAATTTCGATTATTGGCAACCCTGGAT
tactaaaaagaaaattggCGACCATTTTCGATTGCTAAAATTAGGAAAAT
TATCTGCAATTAGTATTATGATACCTTTGACGAATTACGCAACGTTGCGC
GGCCATTTGGTGAACATCGTAGTCAGTTGTGGTAATGCAAAAGAGGTTCA
CAAAGCGTTCAATGtctttgttaaatttggagGTCAAAGAAATTATACCA
AAGGTGAAATCATCAAACAACTCCCTTCTTCAAAATCGACGACCAATGAC
GATGATGAATCCTCGCTGAACCAAAATTCAAAGAATACACCAAAGACATC
AAGTTTAACGATGATAGTGATTGGTGCATCATTGGGAGGCGTTGCTTTTC
TTGTTATCATCGTCGCTATCATTCTATTCATACTCAATAAACGACTGAAG
GAGCAACATATGGCCGTCATTAAAAAGCAAGAGAATGGGCTTACTTTGGA
TGGCTCAAGAGTGATTGTCAACAAAGATGTATTAGAACTGGCGCACGAAA
TCATCCAAGAACGagctgaaaaaatgaaaagcagACCAGATATTATTCCA
GAGCAAGAAAAGGAATTAGAgttcaaattcaaaatggcgaaaGACTTATA
TCAATTAACTGATAACTACTCTATTGACTCTGCATATGAAAAAGCTATCG
ATCCGGTAAAATCCCGGGAAAATGCAGCAAATGATACGGAACTTTCTTTA
GATACAAATACTGGGTCATTAGAGCGAATGTCATCTATGAAAGGATCGTA
TACAGAAATCATTCTAGATCCAAAAGAACCTTTAAACGTAAGACAGTCTG
TAATCTATGAACCAGTTATTGATGAGAAATCAGGATATAGTGAACCGAAC
CATGATGTTTTGATCGAGAGACCGTATCAAGGGATATATTTACAACCAGT
AGATGGCGGGGGCGGTAGTGTGGGCgtaataaaagaagaagatgaTGGGC
AAAGCAGTGACGAGGATGCAAATTATGAAGAATTCCAAGGATGAATGAGT
GGTATTTTTCGTTTGCTGCTTGTATTGATTTCATTGGTTATTTCAGATTT
TGCAGAAGCGGAGAAGAAAGTCTTGATTGTTCGGCGGAATAACACTTTCG
ACACATGGACAGAACCTGATGGAGGGTGTGCAAACTGCGCATGTCGAAAA
CACTCTTCATATATGGTCACCAAATCGAACAAAAGATCGTGTTTCGATAA
TGATGATGTCAGCACAATTTATGGTAAAGATTCGATTCTGACTTCTAAAG
AAGGTCAAGCTATATTCTATGCAACATCGGAACGAAAATACAAATCATGG
ATTGTAAAGAATACCTTTGAATTATATTCTTCTGAAGGAAAACAAATCAC
ATCTTCGAATTGTCAGAATGTAGAAATATCAAAAGTTAATGTTATGAATT
TCGATTATTGGCAACCCTGGATtactaaaaagaaaattggCGACCATTTT
CGATTGCTAAAATTAGGAAAATTATCTGCAATTAGTATTATGATACCTTT
GACGAATTACGCAACGTTGCGCGGCCATTTGGTGAACATCGTAGTCAGTT
GTGGTAATGCAAAAGAGGTTCACAAAGCGTTCAATGtctttgttaaattt
ggagGTCAAAGAAATTATACCAAAGGTGAAATCATCAAACAACTCCCTTC
TTCAAAATCGACGACCAATGACGATGATGAATCCTCGCTGAACCAAAATT
CAAAGAATACACCAAAGACATCAAGTTTAACGATGATAGTGATTGGTGCA
TCATTGGGAGGCGTTGCTTTTCTTGTTATCATCGTCGCTATCATTCTATT
CATACTCAATAAACGACTGAAGGAGCAACATATGGCCGTCATTAAAAAGC
AAGAGAATGGGCTTACTTTGGATGGCTCAAGAGTGATTGTCAACAAAGAT
GTATTAGAACTGGCGCACGAAATCATCCAAGAACGagctgaaaaaatgaa
aagcagACCAGATATTATTCCAGAGCAAGAAAAGGAATTAGAgttcaaat
tcaaaatggcgaaaGACTTATATCAATTAACTGATAACTACTCTATTGAC
TCTGCATATGAAAAAGCTATCGATCCGGTAAAATCCCGGGAAAATGCAGC
AAATGATACGGAACTTTCTTTAGATACAAATACTGGGTCATTAGAGCGAA
TGTCATCTATGAAAGGATCGTATACAGAAATCATTCTAGATCCAAAAGAA
CCTTTAAACGTAAGACAGTCTGTAATCTATGAACCAGTTATTGATGAGAA
ATCAGGATATAGTGAACCGAACCATGATGTTTTGATCGAGAGACCGTATC
AAGGGATATATTTACAACCAGTAGATGGCGGGGGCGGTAGTGTGGGCgta
ataaaagaagaagatgaTGGGCAAAGCAGTGACGAGGATGCAAATTATGA
AGAATTCCAAGGATGAATGAGTGGTATTTTTCGTTTGCTGCTTGTATTGA
TTTCATTGGTTATTTCAGATTTTGCAGAAGCGGAGAAGAAAGTCTTGATT
GTTCGGCGGAATAACACTTTCGACACATGGACAGAACCTGATGGAGGGTG
TGCAAACTGCGCATGTCGAAAACACTCTTCATATATGGTCACCAAATCGA
ACAAAAGATCGTGTTTCGATAATGATGATGTCAGCACAATTTATGGTAAA
GATTCGATTCTGACTTCTAAAGAAGGTCAAGCTATATTCTATGCAACATC
GGAACGAAAATACAAATCATGGATTGTAAAGAATACCTTTGAATTATATT
CTTCTGAAGGAAAACAAATCACATCTTCGAATTGTCAGAATGTAGAAATA
TCAAAAGTTAATGTTATGAATTTCGATTATTGGCAACCCTGGATtactaa
aaagaaaattggCGACCATTTTCGATTGCTAAAATTAGGAAAATTATCTG
CAATTAGTATTATGATACCTTTGACGAATTACGCAACGTTGCGCGGCCAT
TTGGTGAACATCGTAGTCAGTTGTGGTAATGCAAAAGAGGTTCACAAAGC
GTTCAATGtctttgttaaatttggagGTCAAAGAAATTATACCAAAGGTG
AAATCATCAAACAACTCCCTTCTTCAAAATCGACGACCAATGACGATGAT
GAATCCTCGCTGAACCAAAATTCAAAGAATACACCAAAGACATCAAGTTT
AACGATGATAGTGATTGGTGCATCATTGGGAGGCGTTGCTTTTCTTGTTA
TCATCGTCGCTATCATTCTATTCATACTCAATAAACGACTGAAGGAGCAA
CATATGGCCGTCATTAAAAAGCAAGAGAATGGGCTTACTTTGGATGGCTC
AAGAGTGATTGTCAACAAAGATGTATTAGAACTGGCGCACGAAATCATCC
AAGAACGagctgaaaaaatgaaaagcagACCAGATATTATTCCAGAGCAA
GAAAAGGAATTAGAgttcaaattcaaaatggcgaaaGACTTATATCAATT
AACTGATAACTACTCTATTGACTCTGCATATGAAAAAGCTATCGATCCGG
TAAAATCCCGGGAAAATGCAGCAAATGATACGGAACTTTCTTTAGATACA
AATACTGGGTCATTAGAGCGAATGTCATCTATGAAAGGATCGTATACAGA
AATCATTCTAGATCCAAAAGAACCTTTAAACGTAAGACAGTCTGTAATCT
ATGAACCAGTTATTGATGAGAAATCAGGATATAGTGAACCGAACCATGAT
GTTTTGATCGAGAGACCGTATCAAGGGATATATTTACAACCAGTAGATGG
CGGGGGCGGTAGTGTGGGCgtaataaaagaagaagatgaTGGGCAAAGCA
GTGACGAGGATGCAAATTATGAAGAATTCCAAGGATGAATGAGTGGTATT
TTTCGTTTGCTGCTTGTATTGATTTCATTGGTTATTTCAGATTTTGCAGA
AGCGGAGAAGAAAGTCTTGATTGTTCGGCGGAATAACACTTTCGACACAT
GGACAGAACCTGATGGAGGGTGTGCAAACTGCGCATGTCGAAAACACTCT
TCATATATGGTCACCAAATCGAACAAAAGATCGTGTTTCGATAATGATGA
TGTCAGCACAATTTATGGTAAAGATTCGATTCTGACTTCTAAAGAAGGTC
AAGCTATATTCTATGCAACATCGGAACGAAAATACAAATCATGGATTGTA
AAGAATACCTTTGAATTATATTCTTCTGAAGGAAAACAAATCACATCTTC
GAATTGTCAGAATGTAGAAATATCAAAAGTTAATGTTATGAATTTCGATT
ATTGGCAACCCTGGATtactaaaaagaaaattggCGACCATTTTCGATTG
CTAAAATTAGGAAAATTATCTGCAATTAGTATTATGATACCTTTGACGAA
TTACGCAACGTTGCGCGGCCATTTGGTGAACATCGTAGTCAGTTGTGGTA
ATGCAAAAGAGGTTCACAAAGCGTTCAATGtctttgttaaatttggagGT
CAAAGAAATTATACCAAAGGTGAAATCATCAAACAACTCCCTTCTTCAAA
ATCGACGACCAATGACGATGATGAATCCTCGCTGAACCAAAATTCAAAGA
ATACACCAAAGACATCAAGTTTAACGATGATAGTGATTGGTGCATCATTG
GGAGGCGTTGCTTTTCTTGTTATCATCGTCGCTATCATTCTATTCATACT
CAATAAACGACTGAAGGAGCAACATATGGCCGTCATTAAAAAGCAAGAGA
ATGGGCTTACTTTGGATGGCTCAAGAGTGATTGTCAACAAAGATGTATTA
GAACTGGCGCACGAAATCATCCAAGAACGagctgaaaaaatgaaaagcag
ACCAGATATTATTCCAGAGCAAGAAAAGGAATTAGAgttcaaattcaaaa
tggcgaaaGACTTATATCAATTAACTGATAACTACTCTATTGACTCTGCA
TATGAAAAAGCTATCGATCCGGTAAAATCCCGGGAAAATGCAGCAAATGA
TACGGAACTTTCTTTAGATACAAATACTGGGTCATTAGAGCGAATGTCAT
CTATGAAAGGATCGTATACAGAAATCATTCTAGATCCAAAAGAACCTTTA
AACGTAAGACAGTCTGTAATCTATGAACCAGTTATTGATGAGAAATCAGG
ATATAGTGAACCGAACCATGATGTTTTGATCGAGAGACCGTATCAAGGGA
TATATTTACAACCAGTAGATGGCGGGGGCGGTAGTGTGGGCgtaataaaa
gaagaagatgaTGGGCAAAGCAGTGACGAGGATGCAAATTATGAAGAATT
CCAAGGATGAATGAGTGGTATTTTTCGTTTGCTGCTTGTATTGATTTCAT
TGGTTATTTCAGATTTTGCAGAAGCGGAGAAGAAAGTCTTGATTGTTCGG
CGGAATAACACTTTCGACACATGGACAGAACCTGATGGAGGGTGTGCAAA
CTGCGCATGTCGAAAACACTCTTCATATATGGTCACCAAATCGAACAAAA
GATCGTGTTTCGATAATGATGATGTCAGCACAATTTATGGTAAAGATTCG
ATTCTGACTTCTAAAGAAGGTCAAGCTATATTCTATGCAACATCGGAACG
AAAATACAAATCATGGATTGTAAAGAATACCTTTGAATTATATTCTTCTG
AAGGAAAACAAATCACATCTTCGAATTGTCAGAATGTAGAAATATCAAAA
GTTAATGTTATGAATTTCGATTATTGGCAACCCTGGATtactaaaaagaa
aattggCGACCATTTTCGATTGCTAAAATTAGGAAAATTATCTGCAATTA
GTATTATGATACCTTTGACGAATTACGCAACGTTGCGCGGCCATTTGGTG
AACATCGTAGTCAGTTGTGGTAATGCAAAAGAGGTTCACAAAGCGTTCAA
TGtctttgttaaatttggagGTCAAAGAAATTATACCAAAGGTGAAATCA
TCAAACAACTCCCTTCTTCAAAATCGACGACCAATGACGATGATGAATCC
TCGCTGAACCAAAATTCAAAGAATACACCAAAGACATCAAGTTTAACGAT
GATAGTGATTGGTGCATCATTGGGAGGCGTTGCTTTTCTTGTTATCATCG
TCGCTATCATTCTATTCATACTCAATAAACGACTGAAGGAGCAACATATG
GCCGTCATTAAAAAGCAAGAGAATGGGCTTACTTTGGATGGCTCAAGAGT
GATTGTCAACAAAGATGTATTAGAACTGGCGCACGAAATCATCCAAGAAC
GagctgaaaaaatgaaaagcagACCAGATATTATTCCAGAGCAAGAAAAG
GAATTAGAgttcaaattcaaaatggcgaaaGACTTATATCAATTAACTGA
TAACTACTCTATTGACTCTGCATATGAAAAAGCTATCGATCCGGTAAAAT
CCCGGGAAAATGCAGCAAATGATACGGAACTTTCTTTAGATACAAATACT
GGGTCATTAGAGCGAATGTCATCTATGAAAGGATCGTATACAGAAATCAT
TCTAGATCCAAAAGAACCTTTAAACGTAAGACAGTCTGTAATCTATGAAC
CAGTTATTGATGAGAAATCAGGATATAGTGAACCGAACCATGATGTTTTG
ATCGAGAGACCGTATCAAGGGATATATTTACAACCAGTAGATGGCGGGGG
CGGTAGTGTGGGCgtaataaaagaagaagatgaTGGGCAAAGCAGTGACG
AGGATGCAAATTATGAAGAATTCCAAGGATGAATGAGTGGTATTTTTCGT
TTGCTGCTTGTATTGATTTCATTGGTTATTTCAGATTTTGCAGAAGCGGA
GAAGAAAGTCTTGATTGTTCGGCGGAATAACACTTTCGACACATGGACAG
AACCTGATGGAGGGTGTGCAAACTGCGCATGTCGAAAACACTCTTCATAT
ATGGTCACCAAATCGAACAAAAGATCGTGTTTCGATAATGATGATGTCAG
CACAATTTATGGTAAAGATTCGATTCTGACTTCTAAAGAAGGTCAAGCTA
TATTCTATGCAACATCGGAACGAAAATACAAATCATGGATTGTAAAGAAT
ACCTTTGAATTATATTCTTCTGAAGGAAAACAAATCACATCTTCGAATTG
TCAGAATGTAGAAATATCAAAAGTTAATGTTATGAATTTCGATTATTGGC
AACCCTGGATtactaaaaagaaaattggCGACCATTTTCGATTGCTAAAA
TTAGGAAAATTATCTGCAATTAGTATTATGATACCTTTGACGAATTACGC
AACGTTGCGCGGCCATTTGGTGAACATCGTAGTCAGTTGTGGTAATGCAA
AAGAGGTTCACAAAGCGTTCAATGtctttgttaaatttggagGTCAAAGA
AATTATACCAAAGGTGAAATCATCAAACAACTCCCTTCTTCAAAATCGAC
GACCAATGACGATGATGAATCCTCGCTGAACCAAAATTCAAAGAATACAC
CAAAGACATCAAGTTTAACGATGATAGTGATTGGTGCATCATTGGGAGGC
GTTGCTTTTCTTGTTATCATCGTCGCTATCATTCTATTCATACTCAATAA
ACGACTGAAGGAGCAACATATGGCCGTCATTAAAAAGCAAGAGAATGGGC
TTACTTTGGATGGCTCAAGAGTGATTGTCAACAAAGATGTATTAGAACTG
GCGCACGAAATCATCCAAGAACGagctgaaaaaatgaaaagcagACCAGA
TATTATTCCAGAGCAAGAAAAGGAATTAGAgttcaaattcaaaatggcga
aaGACTTATATCAATTAACTGATAACTACTCTATTGACTCTGCATATGAA
AAAGCTATCGATCCGGTAAAATCCCGGGAAAATGCAGCAAATGATACGGA
ACTTTCTTTAGATACAAATACTGGGTCATTAGAGCGAATGTCATCTATGA
AAGGATCGTATACAGAAATCATTCTAGATCCAAAAGAACCTTTAAACGTA
AGACAGTCTGTAATCTATGAACCAGTTATTGATGAGAAATCAGGATATAG
TGAACCGAACCATGATGTTTTGATCGAGAGACCGTATCAAGGGATATATT
TACAACCAGTAGATGGCGGGGGCGGTAGTGTGGGCgtaataaaagaagaa
gatgaTGGGCAAAGCAGTGACGAGGATGCAAATTATGAAGAATTCCAAGG
ATGAATGAGTGGTATTTTTCGTTTGCTGCTTGTATTGATTTCATTGGTTA
TTTCAGATTTTGCAGAAGCGGAGAAGAAAGTCTTGATTGTTCGGCGGAAT
AACACTTTCGACACATGGACAGAACCTGATGGAGGGTGTGCAAACTGCGC
ATGTCGAAAACACTCTTCATATATGGTCACCAAATCGAACAAAAGATCGT
GTTTCGATAATGATGATGTCAGCACAATTTATGGTAAAGATTCGATTCTG
ACTTCTAAAGAAGGTCAAGCTATATTCTATGCAACATCGGAACGAAAATA
CAAATCATGGATTGTAAAGAATACCTTTGAATTATATTCTTCTGAAGGAA
AACAAATCACATCTTCGAATTGTCAGAATGTAGAAATATCAAAAGTTAAT
GTTATGAATTTCGATTATTGGCAACCCTGGATtactaaaaagaaaattgg
CGACCATTTTCGATTGCTAAAATTAGGAAAATTATCTGCAATTAGTATTA
TGATACCTTTGACGAATTACGCAACGTTGCGCGGCCATTTGGTGAACATC
GTAGTCAGTTGTGGTAATGCAAAAGAGGTTCACAAAGCGTTCAATGtctt
tgttaaatttggagGTCAAAGAAATTATACCAAAGGTGAAATCATCAAAC
AACTCCCTTCTTCAAAATCGACGACCAATGACGATGATGAATCCTCGCTG
AACCAAAATTCAAAGAATACACCAAAGACATCAAGTTTAACGATGATAGT
GATTGGTGCATCATTGGGAGGCGTTGCTTTTCTTGTTATCATCGTCGCTA
TCATTCTATTCATACTCAATAAACGACTGAAGGAGCAACATATGGCCGTC
ATTAAAAAGCAAGAGAATGGGCTTACTTTGGATGGCTCAAGAGTGATTGT
CAACAAAGATGTATTAGAACTGGCGCACGAAATCATCCAAGAACGagctg
aaaaaatgaaaagcagACCAGATATTATTCCAGAGCAAGAAAAGGAATTA
GAgttcaaattcaaaatggcgaaaGACTTATATCAATTAACTGATAACTA
CTCTATTGACTCTGCATATGAAAAAGCTATCGATCCGGTAAAATCCCGGG
AAAATGCAGCAAATGATACGGAACTTTCTTTAGATACAAATACTGGGTCA
TTAGAGCGAATGTCATCTATGAAAGGATCGTATACAGAAATCATTCTAGA
TCCAAAAGAACCTTTAAACGTAAGACAGTCTGTAATCTATGAACCAGTTA
TTGATGAGAAATCAGGATATAGTGAACCGAACCATGATGTTTTGATCGAG
AGACCGTATCAAGGGATATATTTACAACCAGTAGATGGCGGGGGCGGTAG
TGTGGGCgtaataaaagaagaagatgaTGGGCAAAGCAGTGACGAGGATG
CAAATTATGAAGAATTCCAAGGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001708XLOC_001708Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003078-exon-sc0000025-1491911889:114326..114812TCONS_00003078-exon-sc0000025-1491911889:114326..114812Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1510915933:114326..114812TCONS_00003078-exon-sc0000025-1510915933:114326..114812Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1575043694:114326..114812TCONS_00003078-exon-sc0000025-1575043694:114326..114812Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1491911889:115003..115159TCONS_00003078-exon-sc0000025-1491911889:115003..115159Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1510915933:115003..115159TCONS_00003078-exon-sc0000025-1510915933:115003..115159Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1575043694:115003..115159TCONS_00003078-exon-sc0000025-1575043694:115003..115159Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1491911889:115525..115793TCONS_00003078-exon-sc0000025-1491911889:115525..115793Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1510915933:115525..115793TCONS_00003078-exon-sc0000025-1510915933:115525..115793Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1575043694:115525..115793TCONS_00003078-exon-sc0000025-1575043694:115525..115793Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1491911889:116045..116168TCONS_00003078-exon-sc0000025-1491911889:116045..116168Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1510915933:116045..116168TCONS_00003078-exon-sc0000025-1510915933:116045..116168Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1575043694:116045..116168TCONS_00003078-exon-sc0000025-1575043694:116045..116168Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1491911889:116450..116648TCONS_00003078-exon-sc0000025-1491911889:116450..116648Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1510915933:116450..116648TCONS_00003078-exon-sc0000025-1510915933:116450..116648Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1575043694:116450..116648TCONS_00003078-exon-sc0000025-1575043694:116450..116648Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1491911889:117018..117057TCONS_00003078-exon-sc0000025-1491911889:117018..117057Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1510915933:117018..117057TCONS_00003078-exon-sc0000025-1510915933:117018..117057Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1575043694:117018..117057TCONS_00003078-exon-sc0000025-1575043694:117018..117057Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1491911889:117372..117399TCONS_00003078-exon-sc0000025-1491911889:117372..117399Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1510915933:117372..117399TCONS_00003078-exon-sc0000025-1510915933:117372..117399Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1575043694:117372..117399TCONS_00003078-exon-sc0000025-1575043694:117372..117399Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1491911889:117644..118708TCONS_00003078-exon-sc0000025-1491911889:117644..118708Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1510915933:117644..118708TCONS_00003078-exon-sc0000025-1510915933:117644..118708Clytia hemisphaericaexon
TCONS_00003078-exon-sc0000025-1575043694:117644..118708TCONS_00003078-exon-sc0000025-1575043694:117644..118708Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003078-proteinTCONS_00003078-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:114326..118708 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0328498	0.0480505	0.0185971	0.0181944	0.243649	0.262547	0.190051	0.336078	0.692047	0.634336	0.366093	0.689149	5.05766	4.71925	6.41209	3.2729	1.09738	3.8293	0.03492	0.146165	0.095283	0.116189	0.0753298	0.0342429	0.0705387	0.0944311	0	0.0240358	0.0364607	0.0185738
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003078 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top