XLOC_001708 (gene) - C. hemisphaerica

Overview
NameXLOC_001708
Unique NameXLOC_001708
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:114326..118708+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001708 ID=XLOC_001708|Name=XLOC_001708|organism=Clytia hemisphaerica|type=gene|length=4383bp|location=Sequence derived from alignment at sc0000025:114326..118708+ (Clytia hemisphaerica)
CTTCTTTCTATCGAGAAAAAAGAATGAAGACgtttattgttgttgttgtg tacAATATTACTAAAGGGAATGATTTTCTTATGACAAAACTTTCGATATT GTGATGTTTTCGTATGGTGGTGAATATGAGTGAAAAATAAACATGGTCTC ATTAGTTGATGGTCATCActtcttgttgttttattttggtCAACCATTTT GTCTGACTGTGCTTTGTTTTTCTATTCTTTGTTGAcgtatttttcctctt ttacTTTGAGGTATTAATCCAGAGAATGGGAGATTTGAAactgtttggtg tttttgggtCGATTTCTGAGTCCTTTGATTATCGTTATCAgtaacatttt cttcttttaacgTGAGTTTAAAGACCTTGGTTtggatgaaataaaaaatt gtgagtgtcaAAAAAATGAGTGGTATTTTTCGTTTGCTGCTTGTATTGAT TTCATTGGTTATTTCAGATTTTGCAGAAGCGGAGAAGGTATGTCATATTT GAATTTTATTATAGAAGTTTTCCAAGTCTGAAGTCCATGAAATTTTAGCA TGATCATCCGTATGAGGATGAAGTCCGTATAATTCCGAAGAAATCAATGT AAAAAGTATATGAACAGGATACAATATGTTTTGGAAAATCCCGATGTACA ACtatcatcaaaatttcatttttgcagAAAGTCTTGATTGTTCGGCGGAA TAACACTTTCGACACATGGACAGAACCTGATGGAGGGTGTGCAAACTGCG CATGTCGAAAACACTCTTCATATATGGTCACCAAATCGAACAAAAGATCG TGTTTCGATAATGATGATGTCAGCACAATTTATGGTACGAtttcttcttt cattttaagAAATTTCTCAAATGCTCTTGAACAAATTTTCTCtgcaattt tgttttttaaattctagcaaaaatattgcaaaaatatCAAGACAAGTCTT TGGATgtccttaactttttgggttttaagcttCAAAATGTACATATTCAC CTCTTTCTGaatatttttgcctattttcctaagaaatcgggtctTTTAGA GACtacaaagccttagaatgttcttaacttgttcttaatatttatgTAAA GATGGAAAAAAATGTTCCTTTTGTAAtagtttttgaactttttgcttGTC GGAGAAATCTTTGGGCCATAAACCTTAAATTACTTTTTCAATACTGTAGG TAAAGATTCGATTCTGACTTCTAAAGAAGGTCAAGCTATATTCTATGCAA CATCGGAACGAAAATACAAATCATGGATTGTAAAGAATACCTTTGAATTA TATTCTTCTGAAGGAAAACAAATCACATCTTCGAATTGTCAGAATGTAGA AATATCAAAAGTTAATGTTATGAATTTCGATTATTGGCAACCCTGGATta ctaaaaagaaaattggCGACCATTTTCGATTGCTAAAATTAGGAAAATTA TCTGCAATTAGTATTATGGTATGTCTTGACTCTAAAATATTTGtggttga aaatttcaattaaacATTATCGATTTCGAATGCAGTTGGTTTATTTGCCG GTTTCAGTTTCCaggtcttttttttattttttttatttttgtcaaaaagc aTGTGACAGTGTTTTCAGTAGAATAAATGTGTCCTTTTCAATATTTGCAT TATCtttcattgattttaaaatctctatttGAAGTTTCTATTTTAAATTA TATCATAACCTGCAACTAGATACCTTTGACGAATTACGCAACGTTGCGCG GCCATTTGGTGAACATCGTAGTCAGTTGTGGTAATGCAAAAGAGGTTCAC AAAGCGTTCAATGtctttgttaaatttggagGTCAAAGAAATTGTAAGTA TAAACAACAAATATTACACCGAATAAAAAAATTCCGACCAAATGACAAAT GACTAGATTTAAATCCAGAACATGGGCGGTTGCTCTGAGAGGAAATACTC GATTCGAAAAGGACTATACACCCGCACCCAAAACGTGTCTAAAGTAATAG ATCTCATACCCCTTCTCCATCTTCTTCTGAGACAGGGAGTGTAACCTATT TCAAAAGGTTAGTATCTCTAAACTCCTCTTCACAAGTAGAGATGAaactt taagaacaaattcacCTATCATAGATACCAAAGGTGAAATCATCAAACAA CTCCCTTCTTCAAAATCGACGACCAATGACGATGATGAATCCTCGCTGAA CCAAAATTCAAAGAATACACCAAAGACATCAAGTTTAACGATGATAGTGA TTGGTGCATCATTGGGAGGCGTTGCTTTTCTTGTTATCATCGTCGCTATC ATTCTATTCATACTCAATAAACGGTAGGTGTCGAAATTTTATTTGAACGA TACCACATTGATTTCATCAAATTCGTCGGTTTCTTTATCTATATAAACTA ACTTTCCCACTTGTACTGAAGAGAGGAGGCTTCTATATTCCCGTACTCCT AAAATTCCCAATATGCAAATATGCATGAGTTTTTTTGCCGCTATACTTCA GCCTcgtaaaaaacaagcaaacatattttccttttgtttAAGAATGTATT GCTTTGTCAGGAGAAAAACAGAATCAAAGACCAACTTATCCATCTCTACT TGAGTCTCATAATCAGTTTCTCTATTTTCATGCCTAAATCTCATGCCTAA AGGCTAgataaaaactttgatttttcttttgttataatttaGACTGAAGG AGCAACATATGGCCGTCATTAAAAAGCAAGAGGTATGTATGTCAATTTTC GAAAGTTAccttgaaaaatatttgcatTATTCTTTTCGTTGGCATTGTTG TCTGTTACTGGGAAGTATATTTGTAGCCTTTCAATTCAAATGAAAGATTG CTGATTCGACGTCCTCGAAACTGAAGGAGTTAGAAGTGAAACTTTCAATC TAACGGTCATGTACTATATATTAGAGTGTAGAGCATTATTTTCTAAATCA GGCATTCATCTGAAAAATAACACAGGTTGTCAAAGATgcttcttttctat tttctatagaGTAATATCTAACACTAACCTTTTTATCTCGTTATAGAATG GGCTTACTTTGGATGGCTCAAGAGGTAAATATTACAGTTCTAATGTACTA AGAAAAGGTGAAGAACCTCATGAATGGAAGAAAAAGTATATTTTGCTACG ACCTCCCCGGATCTGCCGGTTCTCTTAAAGAGTATTGCTAGTTGAATTAA CAGAATTTTAGTTCTAGAGAAAGCTTTTTTGCTAAAGAGTGATGATTATT TTGAAAGATTCTTGCCGTTAactttgagacaggggtgtttttgaATCCAT TTTCATTCTATCACTCAGTGATTGTCAACAAAGATGTATTAGAACTGGCG CACGAAATCATCCAAGAACGagctgaaaaaatgaaaagcagACCAGATAT TATTCCAGAGCAAGAAAAGGAATTAGAgttcaaattcaaaatggcgaaaG ACTTATATCAATTAACTGATAACTACTCTATTGACTCTGCATATGAAAAA GCTATCGATCCGGTAAAATCCCGGGAAAATGCAGCAAATGATACGGAACT TTCTTTAGATACAAATACTGGGTCATTAGAGCGAATGTCATCTATGAAAG GATCGTATACAGAAATCATTCTAGATCCAAAAGAACCTTTAAACGTAAGA CAGTCTGTAATCTATGAACCAGTTATTGATGAGAAATCAGGATATAGTGA ACCGAACCATGATGTTTTGATCGAGAGACCGTATCAAGGGATATATTTAC AACCAGTAGATGGCGGGGGCGGTAGTGTGGGCgtaataaaagaagaagat gaTGGGCAAAGCAGTGACGAGGATGCAAATTATGAAGAATTCCAAGGATG AAATACGTTCACGTGTTCAAATGATCGACTATAAGAAAATCTTGTAAAAT ATGACGAAATCTTCGcggtagcgtagacaagaggggtgtaaaatttgcgT AGGAGAGCAGACTTTTATGACACATTacttatctttttatattatgaata gataattactgtatcataaaaatctgctctcctacacatattttgcgccc ctcctatCAACTGCTTCGACCGAAACTTTACtccaaattttcttccaaac acAGTATGTAATTATAAGAAAGACCGAATTTTTCGTCACCGTATCATGGA CCTTTacataagatattcttttgTAGAAATTACGAATTCTAAAGTAAATA TGAATACCCTAAATAGAAAAACTATAAAGAAAACttcaatgaaaaatata ttcttaaaatttcgattttcgttTTGACTTGTTACTCATACCTCATATAG AATATCTAAAAGCTCATGGTATCGTACAATGTTATCTTTCCAATTAActc tttatctgatattccgatggcggattggcgacG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003078TCONS_00003078Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003078-proteinTCONS_00003078-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:114326..118708 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.05 0.02 0.02 0.24 0.26 0.19 0.34 0.69 0.63 0.37 0.69 5.06 4.72 6.41 3.27 1.1 3.83 0.03 0.15 0.1 0.12 0.08 0.03 0.07 0.09 0 0.02 0.04 0.02