TCONS_00003022 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003022
Unique NameTCONS_00003022
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length786

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003022 ID=TCONS_00003022|Name=TCONS_00003022|organism=Clytia hemisphaerica|type=transcript|length=786bp
GTGCTTTCAATGTAAAACTCCGAGGCTAGTTATTTTCAtgttgaaatgat
tttttcatttttggtacTGGTGTTTCTATGCAAGAACAGTAAAGGAGATA
TATTTTACCCATACGGCTTGACGGAAAACGACACTCTGGTCAAATCTGAC
AATTTCTTCACAGTTGCGAGTGGTTTGATCAACCTTGACGTACCTTATAA
AGGGTATCCACAATTTCACATCTATGACAATGGTTACCTGTCAGTCAAAC
CTTCTACAAGACCGCAACCAAAATCAAAGGACGTGACCGGCATATTCCCG
TATTACGGAATGTTTTCCGTCAAAATGGGTGGATTGTACTATAGACAAGC
TAATGACCAGGCCATACGACAGTACGTAAATGAAACTATACGAATGAGGT
TTCCAAAGCACGATCTCATCCCTCAAAATACACTGATAGTCACCTATTCA
CAAAAATTCCAGTTTCACACCGAATGGACAAATACTTTCCAAATGATTTT
AACGTACAACGACGAACACTCGTACCTCATTTCGAATTATAAAGAACTTA
AAAACGATGGAGCAACAGTAGCCTACAATTTCCAATGTTACCATTCTTTT
GCACCACCAATCAGCACCTCTAAGCTTCAACATAGTTCCAATATAGGTGT
AAAAGGAAGATTTGTGTGGAGTTTACATGACATAGATTGTGATCCGAAAA
AAAATTACATTCACAAGGGAATGCATAACGTGAGTATTTTAAACAAAGGA
GACAATGTGGAACAAAAGGTGAATTTGACAAAACCA
Run BLAST on NCBI

protein sequence of TCONS_00003022-protein

>TCONS_00003022-protein ID=TCONS_00003022-protein|Name=TCONS_00003022-protein|organism=Clytia hemisphaerica|type=polypeptide|length=247bp
MIFSFLVLVFLCKNSKGDIFYPYGLTENDTLVKSDNFFTVASGLINLDVP
YKGYPQFHIYDNGYLSVKPSTRPQPKSKDVTGIFPYYGMFSVKMGGLYYR
QANDQAIRQYVNETIRMRFPKHDLIPQNTLIVTYSQKFQFHTEWTNTFQM
ILTYNDEHSYLISNYKELKNDGATVAYNFQCYHSFAPPISTSKLQHSSNI
GVKGRFVWSLHDIDCDPKKNYIHKGMHNVSILNKGDNVEQKVNLTKP
Run BLAST on NCBI

transcript from alignment at sc0000024:838520..847079-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003022 ID=TCONS_00003022|Name=TCONS_00003022|organism=Clytia hemisphaerica|type=transcript|length=8560bp|location=Sequence derived from alignment at sc0000024:838520..847079- (Clytia hemisphaerica)
GTGCTTTCAATGTAAAACTCCGAGGCTAGTTATTTTCATGTTGAAATGAT
TTTTTCATTTTTGGTACTGGTGTTTCTATGCAAGAACAGTAAAGGTATTT
AAAGTATATTTTGTACATTTTACGAGAACACAGCATGACGTATAGTCTTT
AATAAGTAATAGTAAACTTTGGTAGACGTTAAAGGATTTGTTTTTAAATA
AATGTGACAGTGTTTGCTTAATCATCAATTTTAATTTACAAGCTTTTTCA
TATTGATTTGACACGGAGGTGGAGCAAAATTGGTCAGAAAGAGAAACGGA
AAAACATTTCTTTGCTCATACCAGCACAATATAACAATAGGAAGAATCTG
TCCAAATATGAAATATGTGTCTGATATGAAACGGGAACACTCATGTAAAA
ACAAAACCTTTAAAGGATGTGCTATTTCTATGGTCCTTGAGCGTCACAGT
GCCTATGCCCAGAGAAATGGAAACTTCTCTGGTATGTCACAATGTCACAA
CTGTTTCGTCCTTAGAGACCTGATTTAAGATTCAAATGTATATTCCATCT
AAAGATTTGAATTCAGTGTACTTTCCAGATGGTAATGGATTTTTAAGTCA
ATCAGTGAGTAAAACGAGTAGGTAAGAAATTTTTTCGAACATATTTGCCT
GGAAATCACCAACAATAAATCAGCTGAACCGCGCAAAATACACCGTGTAT
TAAATGTGAGACAATGAGAAATATAACACCCCCTTCTCACAGACCAAGTG
GCTTTCCACTGGAAAAATTAGCCAGAATATCGTACGCAGTGGAACATTAT
ATTCTAATTTTTGTCTCCGCCACAAATCCTCACTACAAAATATTGTACTA
TTGTTCCATCCCCACTCAATTTTTTGGCTCGAATACAATGGAATTCAAAT
CCCCAGCCTTATAAAGCGTGGGAATATCAATCCCCATGCAGTTTTAGTCC
ATTATTTTTACCCTCACTGACTAAAAAAATCTTACCAGGTACTGTTTTCA
ATTTCAGGAGATATATTTTACCCATACGGCTTGACGGAAAACGACACTCT
GGTCAAATCTGACAATTTCTTCACAGTTGCGAGTGGTTTGATCAACCTTG
ACGTACCTTATAAAGGGTATCCACAATTTCACGTGAGTTGAAACTTAAAA
ACATTTTTCATGATACAGTATACAGTTGACGCTTTTCAATACACGGCTTG
CAAAATTATATCAATGCAGTCAAAACATGTAATTACTCGCATAAAGTTCA
CGTGATTCTATTCCCATGTTACTTGCTTTACAAGTTACAACTGACAATTT
TATTAGTGTTTTTTGGTCCCTTCAAAGAACTGACTCAATTCATTTCATTC
ACGTAATGTTTTCGATGGAAATATGCCGCATATTTAGTAATGGCAAATTG
GAAATAACTTTTTCTAGAAAGTAAGTTTTCGGAAATTTTCCATAAAATGA
CGTCATTAACAGTGGCGAAGCCGAGAGAGATTTAATAACAGTGTTTCTTT
TAGCCACAATCCCCACCGTAATATTTGGCACAAAAAGGGGAATTACCTTA
ACTCTGAGATTTAACATGAGACTTAAGATCTCAGGATCCAAAAGCTCAAA
AATGTTCCAATAAGGCTGAGAATAAAGCCTGGAAGCCACTTAACCCTTCC
CAAATCGAGAAATCCAATGAAACAAAGTAGAAGTACTGAAAATGAAAATT
CTCGCCCGATCTTTAAATTCTGAAAAACGTTAAAATACCCAAAAGTGCCA
ATATATTTCGGCGTCGATAGACTTTCTCATAAATTACGTCACGAACATCA
TATAACTCGTTTTGAAATTATTGCCATGGTGATTAACTCACAGCGGATTT
TATACAACTACTTTCTATTCATAAAAAAATCATTTAATGTCTCAAGGTAT
ATAATCACAATGGAGATTATTTGAAAACGAGGCAAGTGATGTTCATGACG
TAATTTATGAAAATGTCTTTTGCATACTCTTCAAAATGATATGAAGACTC
TTCAGCTGATTTTTTTCCGTCAGCGGTCGCAGACCTGAATTAGCGGTCGC
AGACCTGAATCAGCGGTCGCAGACCTGAATTAGCGGTCGCAGACCTGAAT
TTTTTTTTTTTTATCTATAGTATATGTAACACGAACAAATAGTANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCGAGACCTAGATGATCTCGATAATATATA
CAAACACCACCTCTCTTATTATTAGAGGGATGGTCGCATCTTTTGATCTC
ATAATTATCAATAACCAGCCTAGGATCGTTATCTTTTATCTCAGAATTCA
GAAAAGTTTCACCCAAACAGACAATGTCGAATTTATGAATGCTTAGAAAT
GCAGAAAGTTGTTTAATCTTAATAAAATCTCCCATAGAATCTTCTGAATT
AGCGGCCGAAGACCTGAATTAGCGGTCACAGACCTGAATTAGCGGTCACA
GACCTGAATTAGCGGTCACAGATCTGAATTAGCGGTCGCAGACCTGATTT
AGTGGCCGAAGACCTGAATTAAAAACCGAAGATTTGATTAATTCAGGTCT
CCGGTCGTTGATTCAGGTCTTCGACCGTTGATTCAGGTCTTCGACCATTA
ATCCAGGTCTTCAGCTGTTAATTCAGGTCTTCGGCCGTTGATTCAGGTCT
TCAGCTGTTAATTCAGGTCTTTAGCTGTTAATTTAGGTCTTCAGCCGTTG
ATTCAGGTCTTCGACCGTTAATTCAGGTCTTCAGCTGTTAATTCAGGTCT
TCAGCTGTTAATTTAGGTCTTCAGCCGTTGATTCAGGTTTTCGACCGTTA
ATTTAGGTCTTCCAGCTGATAATTTAGGTCTTCGGCCGTTTATTCAGGTC
TTCGGCCGTTAATTCAGGTCTTCGACCGTTAATTTAGGTCTTCAGCTGTT
AATTTAGGTCTCCGGTCGTTGATTCAGGTCTTCGACCGTTGATTCAGGTC
TTCGACCGTTGATTCAGGTCTTTGACCATTAATCCAGGTCTTCAGCTGTT
AATTCAGGTCTTCGGCCGTTGATTCAGGTCTTCAGCTGTCAATTCAGGTC
TTCGACCGTTAATTCAGGTCTTCAGCTGTTAATTCAGGTCTTCAGCTGTT
AATTTAGGTCTTCAGCCGTTGATTCAGGTCTTCGACCGTTAATTCAGGTC
TTCAGCTGTTGATTCAGGTCTTCGGCCGTTGATTCAGGTCATCGACCGTT
AATTCAGGTCTTCGACCGTCGATTCAGGTCTTCGGCCGTTGATTCAGGTT
TTCGACCGTTAATTTAGGTCTTCAGCTGTTAATTCAGGTCTTCAGCTGTT
AATTTAGGTCTTCGACCGTTAATTCAGGTCTTCGACCGCTCAAAATTTTG
AACTTCCTCTCAAATCAACCACTGATTAAATATTATTAACTTTCCAGATC
TATGACAATGGTTACCTGTCAGTCAAACCTTCTACAAGACCGCAACCAAA
ATCAAAGGACGTGACCGGCATATTCCCGTATTACGGAATGTTTTCCGTCA
AAATGGGTGGATTGTACTATAGACAAGCTAATGACCAGGTTTGTCTATTT
GCTGTATATTAATCAAGAACGATTTTGCTTAATCCGGCGGCAAATTTTTC
TCCATCTTCAAAACTCTTAAGGCCGGTCTCCACTTTCACGCGACATGAGC
GAAAACTTTTTGACGTTTTTGTAAGGTCATTGGTTGGTTGAAAAATGAAG
CAATTCCATTGGTTGATGACATAACTGATTTTTTTGTTCGTGTGAAATTT
TTTTATGAGGTAATGTTTTCTTCAAGCAAAAAAGGTTAAGAAAAAAACTG
TCGCCCATTTCGCGCGAAAGTGGAGACTGGCCTTTACATAGTTTAAGTGT
ACTCTTTTGTCAAATTATTTAGGCTTTATTTTTATTTTTTTTCAAGTTGT
AAACAACGGAATCTTAAATTACTAGCCTCTGCTTGAAACAAGAGATATCC
ATGCCCTATTTAAATTTAGCTCCTTAATTCTTTCATTCTTTATCCCTTCA
ACCCTGATAATTCTCACCGGGTCATTGAGAAACAAGGGTTTTATGATATT
CATGACGTAATGTTTTTTAATAGGGAAGACCGGGTGTTTGCTACTAGTTT
TATTGTTTAAATTTAAAATCAGTGACAAACACATAGTCTTGTTTCCCGAA
TAGACGGGGGAGGGTCCAAATAAGCAGGGGGTAGGAACATTTTCTAAATT
CTAATGAGCGGGGGGATGGAATAAGAGAGGGGTAGTTTGAAGACGAAATT
TTTTTAACTGATATCAATTTCAACAAAAAAAAAGAAACTTTAACAAATGA
ACTCATTATTCGAATTTAATCAGCGGGGGGGGGGTCTTAATAAGAGCGGG
GTGATGGATTTTTTTCTCTTAACAATTAGCGGGGGGCGTCTATTCGGGAG
ACAAGAGTAGTTATCCGTGTAAAACATTACATCATAAATATCGCAAATGT
TCATCTAATTTCATCTGATTTCATCCAACCAGGCCATACGACAGTACGTA
AATGAAACTATACGAATGAGGTTTCCAAAGCACGATCTCATCCCTCAAAA
TACACTGATAGTCACCTATTCACAAAAATTCCAGTATGTATCTTTATCTT
TATAAATAATACAGTAATATGGGTGTTATATGATAATACGTGATAATTGT
AACGGGATAATGTCAATTCCATGAACAAATACTGCAATCTATTATGACTT
CCATTATATTTTTGCTTTTTCCCTACTATTTCAACCAGCATGCAAACTTA
AGACAGCGATTGTTCATGGATGGGAAGAGACTGTGAAATTTTTCATGCGC
TTTAACAAGATTNGTTCATGGATGGGAAGAGACTGTGAAATTTCTCATGC
GCTCTAACAAGAAGATGAAGAATGCGATTAACCTAACCAGTGAATGCGAC
GCTACACGCTTTTGTTTTTATAAGAATGGTGATTTTTCAATTCATCATGA
ATATTATTAACTTTTTGAGTAGAATCATCCTGAAATATTCTTACGGTACT
CTTAGGTTTAGATCTAATCCCAGCCAAAATCTAGCATTTAATACTTACTT
AGAGCAAAGATTTGGCACTTTTGTGAAACTTTTGTTGGGTAATTTTGGTA
ATAATGGCAATTTAACGGTATACTCTAAAAATTGCATTCTTAAGTTTCGT
TGCCAATGTCCATGATGGTGATATTCGAAGCATATTCTTATTCTTATAAA
GTATATTCTTATAAAGAAAAGCGTGTAGCCAATACTGCGTAGTGAAAAAG
CAGTTTTCGTCGAACATGCTAGTCGAAGCACAAACTTTCTAAGATTTATC
TCAGGCTGGTGACATTATTCTTCCATTACATTCCATCGATTGTCTTAGCG
GACGAAATCTTTTATGGCTCTGGTTACTCTGACTGCACGCTTTATTTTTA
CAAGAGTTTTTTTGTTTCTGTAAAATGCCTTAAAAATGGTATTTTTAGCT
TCTAGATTTTTCTAAATGCTAAATTTTATGATGGTAGTATTCTTAGCACA
TTTTTAATTTGTGTTGAATTATCATGATGGAAATTCTTGGAGTACTCTTA
TAAAATATAGCGCGTATTTGATTTCCTTACTCAATAATTTGATTCTGGAA
TTTTTAGGTTTCACACCGAATGGACAAATACTTTCCAAATGATTTTAACG
TACAACGACGAACACTCGTACCTCATTTCGAATTATAAAGAACTTAAAAA
CGATGGAGCAACAGTAGCCTACAATTTCCAATGTTACCATTCTTTTGCAC
CACCAATCAGCACCTCTAAGCTTCAACATAGTTCCAATATAGGTGTAAAA
GGAAGATTTGTGTGGAGTTTACATGACATAGATTGTGATCCGAAAAGTAT
GTCTTTTTCGTTAATACTTGCATAAAAAATAATTCCCAAGTGACCTTCTT
CTTTTTTGACGTTTCGAATTTCGTTTCACACTTGTTTCGGAACCGTTTTG
TTTTGGAACCAAACGGAACTTTAGCGTCTGAACATAGTCTAGAAGGCAGT
TTATTCTTTTTCCTCTCGTCATAGAAAATTACATTCACAAGGGAATGCAT
AACGTGAGTATTTTAAACAAAGGAGACAATGTGGAACAAAAGGTGAATTT
GACAAAACCA

Coding sequence (CDS) from alignment at sc0000024:838520..847079-

>TCONS_00003022 ID=TCONS_00003022|Name=TCONS_00003022|organism=Clytia hemisphaerica|type=CDS|length=4446bp|location=Sequence derived from alignment at sc0000024:838520..847079- (Clytia hemisphaerica)
AAAATTACATTCACAAGGGAATGCATAACGTGAGTATTTTAAACAAAGGA
GACAATGTGGAACAAAAGGTGAATTTGACAAAACCAGTTTCACACCGAAT
GGACAAATACTTTCCAAATGATTTTAACGTACAACGACGAACACTCGTAC
CTCATTTCGAATTATAAAGAACTTAAAAACGATGGAGCAACAGTAGCCTA
CAATTTCCAATGTTACCATTCTTTTGCACCACCAATCAGCACCTCTAAGC
TTCAACATAGTTCCAATATAGGTGTAAAAGGAAGATTTGTGTGGAGTTTA
CATGACATAGATTGTGATCCGAAAAGCCATACGACAGTACGTAAATGAAA
CTATACGAATGAGGTTTCCAAAGCACGATCTCATCCCTCAAAATACACTG
ATAGTCACCTATTCACAAAAATTCCAATCTATGACAATGGTTACCTGTCA
GTCAAACCTTCTACAAGACCGCAACCAAAATCAAAGGACGTGACCGGCAT
ATTCCCGTATTACGGAATGTTTTCCGTCAAAATGGGTGGATTGTACTATA
GACAAGCTAATGACCAGGAGATATATTTTACCCATACGGCTTGACGGAAA
ACGACACTCTGGTCAAATCTGACAATTTCTTCACAGTTGCGAGTGGTTTG
ATCAACCTTGACGTACCTTATAAAGGGTATCCACAATTTCACATGATTTT
TTCATTTTTGGTACTGGTGTTTCTATGCAAGAACAGTAAAGAAAATTACA
TTCACAAGGGAATGCATAACGTGAGTATTTTAAACAAAGGAGACAATGTG
GAACAAAAGGTGAATTTGACAAAACCAGTTTCACACCGAATGGACAAATA
CTTTCCAAATGATTTTAACGTACAACGACGAACACTCGTACCTCATTTCG
AATTATAAAGAACTTAAAAACGATGGAGCAACAGTAGCCTACAATTTCCA
ATGTTACCATTCTTTTGCACCACCAATCAGCACCTCTAAGCTTCAACATA
GTTCCAATATAGGTGTAAAAGGAAGATTTGTGTGGAGTTTACATGACATA
GATTGTGATCCGAAAAGCCATACGACAGTACGTAAATGAAACTATACGAA
TGAGGTTTCCAAAGCACGATCTCATCCCTCAAAATACACTGATAGTCACC
TATTCACAAAAATTCCAATCTATGACAATGGTTACCTGTCAGTCAAACCT
TCTACAAGACCGCAACCAAAATCAAAGGACGTGACCGGCATATTCCCGTA
TTACGGAATGTTTTCCGTCAAAATGGGTGGATTGTACTATAGACAAGCTA
ATGACCAGGAGATATATTTTACCCATACGGCTTGACGGAAAACGACACTC
TGGTCAAATCTGACAATTTCTTCACAGTTGCGAGTGGTTTGATCAACCTT
GACGTACCTTATAAAGGGTATCCACAATTTCACATGATTTTTTCATTTTT
GGTACTGGTGTTTCTATGCAAGAACAGTAAAGAAAATTACATTCACAAGG
GAATGCATAACGTGAGTATTTTAAACAAAGGAGACAATGTGGAACAAAAG
GTGAATTTGACAAAACCAGTTTCACACCGAATGGACAAATACTTTCCAAA
TGATTTTAACGTACAACGACGAACACTCGTACCTCATTTCGAATTATAAA
GAACTTAAAAACGATGGAGCAACAGTAGCCTACAATTTCCAATGTTACCA
TTCTTTTGCACCACCAATCAGCACCTCTAAGCTTCAACATAGTTCCAATA
TAGGTGTAAAAGGAAGATTTGTGTGGAGTTTACATGACATAGATTGTGAT
CCGAAAAGCCATACGACAGTACGTAAATGAAACTATACGAATGAGGTTTC
CAAAGCACGATCTCATCCCTCAAAATACACTGATAGTCACCTATTCACAA
AAATTCCAATCTATGACAATGGTTACCTGTCAGTCAAACCTTCTACAAGA
CCGCAACCAAAATCAAAGGACGTGACCGGCATATTCCCGTATTACGGAAT
GTTTTCCGTCAAAATGGGTGGATTGTACTATAGACAAGCTAATGACCAGG
AGATATATTTTACCCATACGGCTTGACGGAAAACGACACTCTGGTCAAAT
CTGACAATTTCTTCACAGTTGCGAGTGGTTTGATCAACCTTGACGTACCT
TATAAAGGGTATCCACAATTTCACATGATTTTTTCATTTTTGGTACTGGT
GTTTCTATGCAAGAACAGTAAAGAAAATTACATTCACAAGGGAATGCATA
ACGTGAGTATTTTAAACAAAGGAGACAATGTGGAACAAAAGGTGAATTTG
ACAAAACCAGTTTCACACCGAATGGACAAATACTTTCCAAATGATTTTAA
CGTACAACGACGAACACTCGTACCTCATTTCGAATTATAAAGAACTTAAA
AACGATGGAGCAACAGTAGCCTACAATTTCCAATGTTACCATTCTTTTGC
ACCACCAATCAGCACCTCTAAGCTTCAACATAGTTCCAATATAGGTGTAA
AAGGAAGATTTGTGTGGAGTTTACATGACATAGATTGTGATCCGAAAAGC
CATACGACAGTACGTAAATGAAACTATACGAATGAGGTTTCCAAAGCACG
ATCTCATCCCTCAAAATACACTGATAGTCACCTATTCACAAAAATTCCAA
TCTATGACAATGGTTACCTGTCAGTCAAACCTTCTACAAGACCGCAACCA
AAATCAAAGGACGTGACCGGCATATTCCCGTATTACGGAATGTTTTCCGT
CAAAATGGGTGGATTGTACTATAGACAAGCTAATGACCAGGAGATATATT
TTACCCATACGGCTTGACGGAAAACGACACTCTGGTCAAATCTGACAATT
TCTTCACAGTTGCGAGTGGTTTGATCAACCTTGACGTACCTTATAAAGGG
TATCCACAATTTCACATGATTTTTTCATTTTTGGTACTGGTGTTTCTATG
CAAGAACAGTAAAGAAAATTACATTCACAAGGGAATGCATAACGTGAGTA
TTTTAAACAAAGGAGACAATGTGGAACAAAAGGTGAATTTGACAAAACCA
GTTTCACACCGAATGGACAAATACTTTCCAAATGATTTTAACGTACAACG
ACGAACACTCGTACCTCATTTCGAATTATAAAGAACTTAAAAACGATGGA
GCAACAGTAGCCTACAATTTCCAATGTTACCATTCTTTTGCACCACCAAT
CAGCACCTCTAAGCTTCAACATAGTTCCAATATAGGTGTAAAAGGAAGAT
TTGTGTGGAGTTTACATGACATAGATTGTGATCCGAAAAGCCATACGACA
GTACGTAAATGAAACTATACGAATGAGGTTTCCAAAGCACGATCTCATCC
CTCAAAATACACTGATAGTCACCTATTCACAAAAATTCCAATCTATGACA
ATGGTTACCTGTCAGTCAAACCTTCTACAAGACCGCAACCAAAATCAAAG
GACGTGACCGGCATATTCCCGTATTACGGAATGTTTTCCGTCAAAATGGG
TGGATTGTACTATAGACAAGCTAATGACCAGGAGATATATTTTACCCATA
CGGCTTGACGGAAAACGACACTCTGGTCAAATCTGACAATTTCTTCACAG
TTGCGAGTGGTTTGATCAACCTTGACGTACCTTATAAAGGGTATCCACAA
TTTCACATGATTTTTTCATTTTTGGTACTGGTGTTTCTATGCAAGAACAG
TAAAGAAAATTACATTCACAAGGGAATGCATAACGTGAGTATTTTAAACA
AAGGAGACAATGTGGAACAAAAGGTGAATTTGACAAAACCAGTTTCACAC
CGAATGGACAAATACTTTCCAAATGATTTTAACGTACAACGACGAACACT
CGTACCTCATTTCGAATTATAAAGAACTTAAAAACGATGGAGCAACAGTA
GCCTACAATTTCCAATGTTACCATTCTTTTGCACCACCAATCAGCACCTC
TAAGCTTCAACATAGTTCCAATATAGGTGTAAAAGGAAGATTTGTGTGGA
GTTTACATGACATAGATTGTGATCCGAAAAGCCATACGACAGTACGTAAA
TGAAACTATACGAATGAGGTTTCCAAAGCACGATCTCATCCCTCAAAATA
CACTGATAGTCACCTATTCACAAAAATTCCAATCTATGACAATGGTTACC
TGTCAGTCAAACCTTCTACAAGACCGCAACCAAAATCAAAGGACGTGACC
GGCATATTCCCGTATTACGGAATGTTTTCCGTCAAAATGGGTGGATTGTA
CTATAGACAAGCTAATGACCAGGAGATATATTTTACCCATACGGCTTGAC
GGAAAACGACACTCTGGTCAAATCTGACAATTTCTTCACAGTTGCGAGTG
GTTTGATCAACCTTGACGTACCTTATAAAGGGTATCCACAATTTCACATG
ATTTTTTCATTTTTGGTACTGGTGTTTCTATGCAAGAACAGTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001654XLOC_001654Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003022-proteinTCONS_00003022-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003022-exon-sc0000024-1575043694:846986..847079TCONS_00003022-exon-sc0000024-1575043694:846986..847079Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1575043694:845948..846072TCONS_00003022-exon-sc0000024-1575043694:845948..846072Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1575043694:841092..841232TCONS_00003022-exon-sc0000024-1575043694:841092..841232Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1575043694:840047..840147TCONS_00003022-exon-sc0000024-1575043694:840047..840147Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1575043694:838784..839022TCONS_00003022-exon-sc0000024-1575043694:838784..839022Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1575043694:838520..838605TCONS_00003022-exon-sc0000024-1575043694:838520..838605Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1510915933:846986..847079TCONS_00003022-exon-sc0000024-1510915933:846986..847079Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1510915933:845948..846072TCONS_00003022-exon-sc0000024-1510915933:845948..846072Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1510915933:841092..841232TCONS_00003022-exon-sc0000024-1510915933:841092..841232Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1510915933:840047..840147TCONS_00003022-exon-sc0000024-1510915933:840047..840147Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1510915933:838784..839022TCONS_00003022-exon-sc0000024-1510915933:838784..839022Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1510915933:838520..838605TCONS_00003022-exon-sc0000024-1510915933:838520..838605Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1491911889:846986..847079TCONS_00003022-exon-sc0000024-1491911889:846986..847079Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1491911889:845948..846072TCONS_00003022-exon-sc0000024-1491911889:845948..846072Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1491911889:841092..841232TCONS_00003022-exon-sc0000024-1491911889:841092..841232Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1491911889:840047..840147TCONS_00003022-exon-sc0000024-1491911889:840047..840147Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1491911889:838784..839022TCONS_00003022-exon-sc0000024-1491911889:838784..839022Clytia hemisphaericaexon
TCONS_00003022-exon-sc0000024-1491911889:838520..838605TCONS_00003022-exon-sc0000024-1491911889:838520..838605Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:838520..847079 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.580426	0.196569	0.711456	0.444038	0.569949	0.320897	0.0622941	0.491396	0.0408928	0.0424676	0.104742	0.0374682	0.276946	0.0946204	0	0.0683962	0.237795	0.086991	0.352496	0.384564	0.660154	0.942675	0	0.0899782	0.272981	0.139062
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003886NIDO_dom
Vocabulary: Biological Process
TermDefinition
GO:0007160cell-matrix adhesion
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007160 cell-matrix adhesion
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003022 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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