XLOC_001654 (gene) - C. hemisphaerica

Overview


Name	XLOC_001654
Unique Name	XLOC_001654
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000024:838520..847079-

gene from alignment at sc0000024:838520..847079-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_001654 ID=XLOC_001654|Name=XLOC_001654|organism=Clytia hemisphaerica|type=gene|length=8560bp|location=Sequence derived from alignment at sc0000024:838520..847079- (Clytia hemisphaerica)
GTGCTTTCAATGTAAAACTCCGAGGCTAGTTATTTTCATGTTGAAATGAT
TTTTTCATTTTTGGTACTGGTGTTTCTATGCAAGAACAGTAAAGGTATTT
AAAGTATATTTTGTACATTTTACGAGAACACAGCATGACGTATAGTCTTT
AATAAGTAATAGTAAACTTTGGTAGACGTTAAAGGATTTGTTTTTAAATA
AATGTGACAGTGTTTGCTTAATCATCAATTTTAATTTACAAGCTTTTTCA
TATTGATTTGACACGGAGGTGGAGCAAAATTGGTCAGAAAGAGAAACGGA
AAAACATTTCTTTGCTCATACCAGCACAATATAACAATAGGAAGAATCTG
TCCAAATATGAAATATGTGTCTGATATGAAACGGGAACACTCATGTAAAA
ACAAAACCTTTAAAGGATGTGCTATTTCTATGGTCCTTGAGCGTCACAGT
GCCTATGCCCAGAGAAATGGAAACTTCTCTGGTATGTCACAATGTCACAA
CTGTTTCGTCCTTAGAGACCTGATTTAAGATTCAAATGTATATTCCATCT
AAAGATTTGAATTCAGTGTACTTTCCAGATGGTAATGGATTTTTAAGTCA
ATCAGTGAGTAAAACGAGTAGGTAAGAAATTTTTTCGAACATATTTGCCT
GGAAATCACCAACAATAAATCAGCTGAACCGCGCAAAATACACCGTGTAT
TAAATGTGAGACAATGAGAAATATAACACCCCCTTCTCACAGACCAAGTG
GCTTTCCACTGGAAAAATTAGCCAGAATATCGTACGCAGTGGAACATTAT
ATTCTAATTTTTGTCTCCGCCACAAATCCTCACTACAAAATATTGTACTA
TTGTTCCATCCCCACTCAATTTTTTGGCTCGAATACAATGGAATTCAAAT
CCCCAGCCTTATAAAGCGTGGGAATATCAATCCCCATGCAGTTTTAGTCC
ATTATTTTTACCCTCACTGACTAAAAAAATCTTACCAGGTACTGTTTTCA
ATTTCAGGAGATATATTTTACCCATACGGCTTGACGGAAAACGACACTCT
GGTCAAATCTGACAATTTCTTCACAGTTGCGAGTGGTTTGATCAACCTTG
ACGTACCTTATAAAGGGTATCCACAATTTCACGTGAGTTGAAACTTAAAA
ACATTTTTCATGATACAGTATACAGTTGACGCTTTTCAATACACGGCTTG
CAAAATTATATCAATGCAGTCAAAACATGTAATTACTCGCATAAAGTTCA
CGTGATTCTATTCCCATGTTACTTGCTTTACAAGTTACAACTGACAATTT
TATTAGTGTTTTTTGGTCCCTTCAAAGAACTGACTCAATTCATTTCATTC
ACGTAATGTTTTCGATGGAAATATGCCGCATATTTAGTAATGGCAAATTG
GAAATAACTTTTTCTAGAAAGTAAGTTTTCGGAAATTTTCCATAAAATGA
CGTCATTAACAGTGGCGAAGCCGAGAGAGATTTAATAACAGTGTTTCTTT
TAGCCACAATCCCCACCGTAATATTTGGCACAAAAAGGGGAATTACCTTA
ACTCTGAGATTTAACATGAGACTTAAGATCTCAGGATCCAAAAGCTCAAA
AATGTTCCAATAAGGCTGAGAATAAAGCCTGGAAGCCACTTAACCCTTCC
CAAATCGAGAAATCCAATGAAACAAAGTAGAAGTACTGAAAATGAAAATT
CTCGCCCGATCTTTAAATTCTGAAAAACGTTAAAATACCCAAAAGTGCCA
ATATATTTCGGCGTCGATAGACTTTCTCATAAATTACGTCACGAACATCA
TATAACTCGTTTTGAAATTATTGCCATGGTGATTAACTCACAGCGGATTT
TATACAACTACTTTCTATTCATAAAAAAATCATTTAATGTCTCAAGGTAT
ATAATCACAATGGAGATTATTTGAAAACGAGGCAAGTGATGTTCATGACG
TAATTTATGAAAATGTCTTTTGCATACTCTTCAAAATGATATGAAGACTC
TTCAGCTGATTTTTTTCCGTCAGCGGTCGCAGACCTGAATTAGCGGTCGC
AGACCTGAATCAGCGGTCGCAGACCTGAATTAGCGGTCGCAGACCTGAAT
TTTTTTTTTTTTATCTATAGTATATGTAACACGAACAAATAGTANNNNNN
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NNNNNNNNNNNNNNNNNNNNNCGAGACCTAGATGATCTCGATAATATATA
CAAACACCACCTCTCTTATTATTAGAGGGATGGTCGCATCTTTTGATCTC
ATAATTATCAATAACCAGCCTAGGATCGTTATCTTTTATCTCAGAATTCA
GAAAAGTTTCACCCAAACAGACAATGTCGAATTTATGAATGCTTAGAAAT
GCAGAAAGTTGTTTAATCTTAATAAAATCTCCCATAGAATCTTCTGAATT
AGCGGCCGAAGACCTGAATTAGCGGTCACAGACCTGAATTAGCGGTCACA
GACCTGAATTAGCGGTCACAGATCTGAATTAGCGGTCGCAGACCTGATTT
AGTGGCCGAAGACCTGAATTAAAAACCGAAGATTTGATTAATTCAGGTCT
CCGGTCGTTGATTCAGGTCTTCGACCGTTGATTCAGGTCTTCGACCATTA
ATCCAGGTCTTCAGCTGTTAATTCAGGTCTTCGGCCGTTGATTCAGGTCT
TCAGCTGTTAATTCAGGTCTTTAGCTGTTAATTTAGGTCTTCAGCCGTTG
ATTCAGGTCTTCGACCGTTAATTCAGGTCTTCAGCTGTTAATTCAGGTCT
TCAGCTGTTAATTTAGGTCTTCAGCCGTTGATTCAGGTTTTCGACCGTTA
ATTTAGGTCTTCCAGCTGATAATTTAGGTCTTCGGCCGTTTATTCAGGTC
TTCGGCCGTTAATTCAGGTCTTCGACCGTTAATTTAGGTCTTCAGCTGTT
AATTTAGGTCTCCGGTCGTTGATTCAGGTCTTCGACCGTTGATTCAGGTC
TTCGACCGTTGATTCAGGTCTTTGACCATTAATCCAGGTCTTCAGCTGTT
AATTCAGGTCTTCGGCCGTTGATTCAGGTCTTCAGCTGTCAATTCAGGTC
TTCGACCGTTAATTCAGGTCTTCAGCTGTTAATTCAGGTCTTCAGCTGTT
AATTTAGGTCTTCAGCCGTTGATTCAGGTCTTCGACCGTTAATTCAGGTC
TTCAGCTGTTGATTCAGGTCTTCGGCCGTTGATTCAGGTCATCGACCGTT
AATTCAGGTCTTCGACCGTCGATTCAGGTCTTCGGCCGTTGATTCAGGTT
TTCGACCGTTAATTTAGGTCTTCAGCTGTTAATTCAGGTCTTCAGCTGTT
AATTTAGGTCTTCGACCGTTAATTCAGGTCTTCGACCGCTCAAAATTTTG
AACTTCCTCTCAAATCAACCACTGATTAAATATTATTAACTTTCCAGATC
TATGACAATGGTTACCTGTCAGTCAAACCTTCTACAAGACCGCAACCAAA
ATCAAAGGACGTGACCGGCATATTCCCGTATTACGGAATGTTTTCCGTCA
AAATGGGTGGATTGTACTATAGACAAGCTAATGACCAGGTTTGTCTATTT
GCTGTATATTAATCAAGAACGATTTTGCTTAATCCGGCGGCAAATTTTTC
TCCATCTTCAAAACTCTTAAGGCCGGTCTCCACTTTCACGCGACATGAGC
GAAAACTTTTTGACGTTTTTGTAAGGTCATTGGTTGGTTGAAAAATGAAG
CAATTCCATTGGTTGATGACATAACTGATTTTTTTGTTCGTGTGAAATTT
TTTTATGAGGTAATGTTTTCTTCAAGCAAAAAAGGTTAAGAAAAAAACTG
TCGCCCATTTCGCGCGAAAGTGGAGACTGGCCTTTACATAGTTTAAGTGT
ACTCTTTTGTCAAATTATTTAGGCTTTATTTTTATTTTTTTTCAAGTTGT
AAACAACGGAATCTTAAATTACTAGCCTCTGCTTGAAACAAGAGATATCC
ATGCCCTATTTAAATTTAGCTCCTTAATTCTTTCATTCTTTATCCCTTCA
ACCCTGATAATTCTCACCGGGTCATTGAGAAACAAGGGTTTTATGATATT
CATGACGTAATGTTTTTTAATAGGGAAGACCGGGTGTTTGCTACTAGTTT
TATTGTTTAAATTTAAAATCAGTGACAAACACATAGTCTTGTTTCCCGAA
TAGACGGGGGAGGGTCCAAATAAGCAGGGGGTAGGAACATTTTCTAAATT
CTAATGAGCGGGGGGATGGAATAAGAGAGGGGTAGTTTGAAGACGAAATT
TTTTTAACTGATATCAATTTCAACAAAAAAAAAGAAACTTTAACAAATGA
ACTCATTATTCGAATTTAATCAGCGGGGGGGGGGTCTTAATAAGAGCGGG
GTGATGGATTTTTTTCTCTTAACAATTAGCGGGGGGCGTCTATTCGGGAG
ACAAGAGTAGTTATCCGTGTAAAACATTACATCATAAATATCGCAAATGT
TCATCTAATTTCATCTGATTTCATCCAACCAGGCCATACGACAGTACGTA
AATGAAACTATACGAATGAGGTTTCCAAAGCACGATCTCATCCCTCAAAA
TACACTGATAGTCACCTATTCACAAAAATTCCAGTATGTATCTTTATCTT
TATAAATAATACAGTAATATGGGTGTTATATGATAATACGTGATAATTGT
AACGGGATAATGTCAATTCCATGAACAAATACTGCAATCTATTATGACTT
CCATTATATTTTTGCTTTTTCCCTACTATTTCAACCAGCATGCAAACTTA
AGACAGCGATTGTTCATGGATGGGAAGAGACTGTGAAATTTTTCATGCGC
TTTAACAAGATTNGTTCATGGATGGGAAGAGACTGTGAAATTTCTCATGC
GCTCTAACAAGAAGATGAAGAATGCGATTAACCTAACCAGTGAATGCGAC
GCTACACGCTTTTGTTTTTATAAGAATGGTGATTTTTCAATTCATCATGA
ATATTATTAACTTTTTGAGTAGAATCATCCTGAAATATTCTTACGGTACT
CTTAGGTTTAGATCTAATCCCAGCCAAAATCTAGCATTTAATACTTACTT
AGAGCAAAGATTTGGCACTTTTGTGAAACTTTTGTTGGGTAATTTTGGTA
ATAATGGCAATTTAACGGTATACTCTAAAAATTGCATTCTTAAGTTTCGT
TGCCAATGTCCATGATGGTGATATTCGAAGCATATTCTTATTCTTATAAA
GTATATTCTTATAAAGAAAAGCGTGTAGCCAATACTGCGTAGTGAAAAAG
CAGTTTTCGTCGAACATGCTAGTCGAAGCACAAACTTTCTAAGATTTATC
TCAGGCTGGTGACATTATTCTTCCATTACATTCCATCGATTGTCTTAGCG
GACGAAATCTTTTATGGCTCTGGTTACTCTGACTGCACGCTTTATTTTTA
CAAGAGTTTTTTTGTTTCTGTAAAATGCCTTAAAAATGGTATTTTTAGCT
TCTAGATTTTTCTAAATGCTAAATTTTATGATGGTAGTATTCTTAGCACA
TTTTTAATTTGTGTTGAATTATCATGATGGAAATTCTTGGAGTACTCTTA
TAAAATATAGCGCGTATTTGATTTCCTTACTCAATAATTTGATTCTGGAA
TTTTTAGGTTTCACACCGAATGGACAAATACTTTCCAAATGATTTTAACG
TACAACGACGAACACTCGTACCTCATTTCGAATTATAAAGAACTTAAAAA
CGATGGAGCAACAGTAGCCTACAATTTCCAATGTTACCATTCTTTTGCAC
CACCAATCAGCACCTCTAAGCTTCAACATAGTTCCAATATAGGTGTAAAA
GGAAGATTTGTGTGGAGTTTACATGACATAGATTGTGATCCGAAAAGTAT
GTCTTTTTCGTTAATACTTGCATAAAAAATAATTCCCAAGTGACCTTCTT
CTTTTTTGACGTTTCGAATTTCGTTTCACACTTGTTTCGGAACCGTTTTG
TTTTGGAACCAAACGGAACTTTAGCGTCTGAACATAGTCTAGAAGGCAGT
TTATTCTTTTTCCTCTCGTCATAGAAAATTACATTCACAAGGGAATGCAT
AACGTGAGTATTTTAAACAAAGGAGACAATGTGGAACAAAAGGTGAATTT
GACAAAACCA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00003022	TCONS_00003022	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00003022-protein	TCONS_00003022-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000024	supercontig	sc0000024:838520..847079 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.58	0.2	0.71	0.44	0.57	0.32	0.06	0.49	0.04	0.04	0.1	0.04	0.28	0.09	0	0.07	0.24	0.09	0.35	0.38	0.66	0.94	0	0.09	0.27	0.14

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XLOC_001654 (gene) - C. hemisphaerica