TCONS_00002677 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002677
Unique NameTCONS_00002677
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2735

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002677 ID=TCONS_00002677|Name=TCONS_00002677|organism=Clytia hemisphaerica|type=transcript|length=2735bp
ACGGTAGTGATATCTGTGCGAAAGCATTTGAATGGTATTGCTCAAATTTG
CACAGAGATGGTGATACAATTGGTTTAGTACATGTTTACCAAACTCCCGT
TGTTCCTGTTCCACTAGGAGGTGACAATATGATATATGATGCTGGACTTT
ATGATCAATTACTTCAAGATGCATTCAAAACAAGCCAACATATTCTGGCT
AAATACAAAAGCAAATGCACTGATTTGAATATAAAACATGAAGAGTTTTT
CCAGCACATGAACGACTCAGTTGGTCATACTATTTGTAGTATTGCACATG
AAAAAGATgccaaaaatattattatggGTCAAAGAGGGTTAGGTGTTGTG
CGCAGAACACTTCTTGGAAGCACAAGTGATTATGTTGTGCATCATTCACA
TCTACCAACAATCATTATACCGCATAAGGAATGAAGATTgcattttatat
ttatttacaaatttattaCCAATACACTTAttaatattattttaatgtac
ATTAGAATGAATTTTTAGGAATCCAGCATAATAATCATTTTACCAGTGGC
CCAGGTCTATCAAAGTCGCCTTATTTAGTATTTTCTGGTCATAATTTGGC
TATTTGTATCATTTGTTCTGGTCCTGTTAACGAATACATCTTCGATTTAA
TTAGGTTCACTGacactcatttttttctttcttttagtgaaaacaaagaa
aataaattagaaattaaagaaagcaatacaaaataaacaataataataat
acaatATGGCAACAACAACCGAAGATGGATCAGTCACTTTTGAATCACAA
ACATTGAATTTGGTTTGCATCGATTCTAGTAAACACAGCAAACGTGCTCT
TGAATGGTATTTTGACAATCAGCATCGTGATGGTGACCAGGTTGGTTTGG
TTCATGTTTTTGTGCCTCCTGATCTCCCAGCTTTCGGTATTTATGcaGGT
GGAATGGCTCCTATAAACATGTACCAAGAAACATTGCAGGCGGGTATCGA
GGACAGTAAAAAGATTGTCGAAGAATACAAAACATACTGTTTATCTAAAG
GGGTATCACCAAAATATTTCGTGCAGTCTTTAAATGATTCAATTGGACAT
ACAATTTGTGATattgcaaaacaaaacaaagccaAGATGATGGTGCTCGG
TCAAAGAGGCCTGGGTGCTATTCGTAGAACATTTTTAGGAAGTGTGAGTG
ACTACGTCATACATCATGCACATATTCCTGTTTTGATCGTACCTCCAAAA
TAGTTGTTAAAATTTTTATGAATCACAACCCCAGCCGAATATTCTTTGAA
AAGCTTGTTGTGTAGAGGTGTTTTTTGGAGATATTGTCAGCAGCTCGTCA
CTTCTTGTCATTCATTCACCCTTAGTCAGTAGATATATTATTTCAAACAT
ATACGACAACCATTAAGtaattttgatttatatataattttttttattat
tattaaaatatttttgtagtaATAACTTGTACTGTAATTTTTATGtaaat
gaaatagaaaatttttctcttCGTCTTGGAATTATTGCCTGTCACCTTCC
AAAAAGTATTCAAATGTCattctatgtttttttttaagtttaaaacaaaa
agagaaaataataaatatataataCAAAGATGGCTCAGAACATTGAAAAA
GTCACATTGAACCTGATCTGTGTAGATGCTTGTGATCACAGTAAAAGAGC
CATGGACTGGTATTTGTCAACACTTCACCGTGAGGGAGATGACGTCGGTT
TAGTTCATATTCATTGTTTACCAGAGCTGCCTTCATTTGGTTTATATGCT
GGTGGTTTAATCGCTACCGATTTGTATCAAGAGCAAATTAAAGAAAGTAT
TCAAGCTAGCAAGAAGGTTGTTGAACAATACAAAAAGTTCCTCGCGGAGA
AAGAGATCACAGCAAAGATCTATTGTCGCAGTATGATAGATTCAGTTGGT
CACACAATATGTGAGATTGCCAAAGAAAGTAATGCTACAACCATCATTAT
GGGTCAACGTGGTTTAGGTGCCATTCGAAGAACGTTCTTGGGAAGTACCA
GTGACTATGTGTTACATCATGCACATATCCCTGTGGCAGTTATTCCTCCC
AACCAATGAACATCCATGGGAAAGCTCGGCAGGAAAAGGTTTCGATGGAT
TTTATTAATCATAGATTAATAGACTGCTTTTAAAGGACTTTATCATCTTT
GTAGTATTAAACATTTATTCCTTCTTTATGATCTATATTTAATATGTAAA
CCgtaaacaaaattttatactGTAAATACAATTTATCACAATAATGCATA
TAAAAATATCATTCAAAACAAGTTGACAGCGTTTTCAATACCTTAGCCTA
TAATTTTCTATGAATGTTTTTTGATGTCACTATACTAAAtcggtgaattt
ttttttgtttctcaggaaaaagaataaaaagagaaatacaATTAGAAATA
AATAATCAACTAATTTGAACGAAAACATGTAATGGCATCAAAAGGCAATT
TAAACCTGTTATGTGTCGATGGTAGCTCGCACAGTGATAGGGCTTTTGAA
TGGTACTCTTCACATTACCATCGTGAAGGAGATCGTATAGGAATATGCAC
CATACACGAGATTCCATATGTTCCTATGGGTTTATATGAGGATGGATTGA
TGCTCTCAGAGGCAGCCTATCCACAACTTTTGAATGATAGTGTCAACAAA
AGCaaagaaatttgtgaaaaatttaaacaacgTTC
Run BLAST on NCBI

transcript from alignment at sc0000021:310558..321739-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002677 ID=TCONS_00002677|Name=TCONS_00002677|organism=Clytia hemisphaerica|type=transcript|length=11182bp|location=Sequence derived from alignment at sc0000021:310558..321739- (Clytia hemisphaerica)
ACGGTAGTGATATCTGTGCGAAAGCATTTGAATGTAAGTAAAAACAATTT
CTTTATCAATTTTTGTAAACAATAAAGAGCTGTTATCTTTCTATCTAAAA
ACTAATTTAATCGGATTAACTTTCGCGACATTAAATTTTGCAAAATGAAA
ACACGTGAGATATCTGACTCGCGAAATTAAATCTACCACAAAACTTTTTA
AATTGCATTTTCGGCTGAGAAACTAGTCCAAAGTTTCCATTTGTGGCAAA
AAATGCGCTATTTTTCAGCTGTTTTCAGGCTTATTCGCGAAATTAAATCC
AAGCGAAATCTTTCAAAAATTAAATCCAGAAAATTTCGCGATTTTTTTCG
CTTGCGAAATATTTAATCCAATTAACCAATGAAGTATGAATTTTTCTACA
ATTCTCTTACGCCAGGGTATTGCTCAAATTTGCACAGAGATGGTGATACA
ATTGGTTTAGTACATGTTTACCAAACTCCCGTTGTTCCTGTTCCACTAGG
AGGTATGCTTCATTTCGTATTTGCTAATATCGGATAAGTTTTCATGTCAC
TTTCAACAAACTAAAAAGCGATTTTTTTGCTTCTTTGTTTTCATTTGCCA
TGCAATCTTTTTTCCAAAATCTTTTCCCTTTAGCAGGTGACAATATGATA
TATGATGCTGGACTTTATGATCAATTACTTCAAGATGCATTCAAAACAAG
CCAACATATTCTGGCTAAATACAAAAGCAAATGCACTGATTTGAATGTAA
GATAGTTTGAAAGCTCCATTTAGTTGATTTTTTTTCTCCAAAAATGATAT
GTACCACTGGAGAGTCTTCTGATAACTTTTAAAATTTGGCATTAGTGTCA
GTCTTTATCATTCAACAAGAAAACTGATAAATTGTTATTGTAAGGCAAAA
ATAAATCCGGAAACCGGCCAGGTGAAAAAAAAAAATTTGTCTGACCCGGT
CTTCAATGATCTTAACTTATCAAGATTAGCAACAACAAAAAATTCCGCCC
GGTCGCGTGAGAGCTTTCCTTCACCTGCATTCCAGAAACACCACTTTTTT
TTTATTTTCGCTTAACTGCAATTTTTTTTCTATACAGCAAATGAAATCAT
AAAAGCTCAATCTTTTTCAGATAAAACATGAAGAGTTTTTCCAGCACATG
AACGACTCAGTTGGTCATACTATTTGTACCATTGCACATGAAAAAAATGC
CAAAAATATTATTATGGGTCAAAGAGGGTTAGGTGTTGTGCGCAGAACAC
TTCTTGGAAGCACAAGTGATTATGTTGTGCATCATTCACATCTACCAACA
ATCATTATACCGCATAAGGAATGAAGATTGCATTTTATATTTATTTACAA
ATTTATTACCAATACACTTATTAATATTATTTTAATGTACATTAGAATGA
ATTTTTAGGAATCCAGCATAATAATCATTTTACCAGTGGCCCAGGTCTAT
CAAAGTCGCCTTATTTAGTATTTTCTGGTCATAATTTGGCTATTTGTATC
ATTTGTTCTGGTCCTGTTAACGAATACATCTTCGATTTAATTAGGTTCAC
TGACACTCATTTTTTTCTTTCTTTTAGTGAAAACAAAGAAAATAAATTAG
AAATTAAAGAAAGCAATACAAAATAAACAATAATAATAATACAATATGGC
AACAACAACCGAAGATGGATCAGTCACTTTTGAATCACAAACATTGAATT
TGGTTTGCATCGATTCTAGTAAACACNGTTTTTCTAATCATGCAATGTCT
TGTTTTATACAGTGAACGGAAAATAACAAATAAAATTTAACAATAGATAA
TAAAAAACATGGTTGCAACAGAAAAACTAAATCTTTTTTGTGTTGACGGT
AGTGATATCTGTGCGAAAGCATTTGAATGTAAGTAAAAACAATTTCTTTA
TCAATTTTTGTAAACAATAAAAAGCTGTTATCTTTCTATCTAAAAACTAA
TTTAATCGGATTAACTTTCGCGAGATTAAATTTTGCAAAATGAAAACACG
TGAGATATCTGACTCGCGAAATTAACTCTACCACAAAACTTTTTAAATTG
CATTTTCGGCTGAGAAACCAGTCCAAAGTCACCATTTGTGGCAAAAAATG
CGCTATTTTCCAGCTGTTTTCAGGCTTATTCGCGAAATTAAATCCAACCG
AAATTTTTCAAAAATTAAATCCAGAAAATTTCGTGAATTTTTTCGCTTGC
GAAATATTTAATCCAATTAAACAATGAAGTATGAATTTTTCTACAATTCT
CTCACGCCAGGGTATTGCTCAAATTTGCACAGAGATGGTGATACAATTGG
TTTAGTACATGTTTACCAAACTCCCGTTGTTCCTGTTCCACTAGGAGGTA
TGCTTCATTTCGTATTTGCTAATATCGGATAAGTTTTCATGTCACTTTCA
ACAAACTAAAAAGCGATTTTTTTGCTTCTTTGTTTTCATTTGCCATGCAA
TCTTTTTTCCAAAATCTTTTCCCTTTAGCAGGTGACAATATGATATATGA
TGCTGGACTTTATGATCAATTACTTCAAGATGCATTCAAAACAAGCCAAC
ATATTCTGGCTAAATACAAAAGCAAATGCACTGATTTGAATGTAAGATAG
TTTGAAAGCTCCATTTAGTTGATTTTTTTTCTCCAAAATTTGCTGTTTCA
ATTTACGTTGGTTGTTCATGATATGTACCACTGGAGATTCTTCTGATAAT
TTGGCATTAGTGTCAGTCTCTATCATTCAACAAGAAAACTGATAAATACA
CCGTTTCGACCGTAGTCGCGCGGTCAGGCGCGTGCCAATTTAATATCTAA
TTATCCGCCTAAACTCGATCCAATCCTTTTTTTACACCTTTTTCTATTGT
CTATGAAAAAGGACGGTTATATATTATTACGGTTATATATTAAACGGTTT
TAGTGGGATAAAGCGGAAAAAGAAATGCCCGTGCGGCAATTGGCGGCTAC
GATCGAAAAGGTGTATTGTTATTATTGTAACTGCAATTTTTTTCAATACA
GCAAATAATAAATCATAAAACCTCAATCTTTTTTCAGATAAAACATGAAG
AGTTTTTCCAGCACATGAACGACTCAGTTGGTCATACTATTTGTAGTATT
GCACATGAAAAAGATGCCAAAAATATTATTATGGGTCAAAGAGGGTTAGG
TGTTGTGCGCAGAACACTTCTTGGAAGCACAAGTGATTATGTTGTGCATC
ATTCACATCTACCAACAATCATTATACCGCATAAGGAATGAAGATTGCAT
TTTATATTTATTTACAAATTTATTACCAATACACTTATTAATATTATTTT
AATGTACATTAGAATGAATTTTTAGGAATCCAGCATAATAATCATTTTAC
CAGTGGCCCAGGTCTATCAAAGTCGCCTTATTTAGTATTTTCTGGTCATA
ATTTGGCTATTTGTATCATTTGTTCTGGTCCTGTTAACGAATACATCTTC
GATTTAATTAGGTTCACTGACACTCATTTTTTTCTTTCTTTTAGTGAAAA
CAAAGAAAATAAATTAGAAATTAAAGAAAGCAATACAAAATAAACAATAA
TAATAATACAATATGGCAACAACAACCGAAGATGGATCAGTCACTTTTGA
ATCACAAACATTGAATTTGGTTTGCATCGATTCTAGTAAACACAGCAAAC
GTGCTCTTGAATGTAAGCTACTTGTTTGATCCTTTTTTCGACCTACCTTG
GAGATCCTTTAATTTAACCCATGTTCGTTCATTCGTTCGTTTAATCCTTT
TTTGGACCTACCTGGAGGTCCTTTAAATTAACCGATGTTCGTCCGTTACC
AGCTTTCCTCGGGATTGGCTCATTAGTTTCTTCTGATTTTTTGCACAGTG
ATGCAAAATGGTGATTCCCAAAAAATGACGGAGGCCGATTTTCGAAAAAA
AACAAATTTAGTGAAAATTAGGGCCAAAAAGGGCCTAAAAATGGGATTTT
TTGGACTTTGTGTGAAACTGCTTCATTAGTTTATTCTGATTTTATGCATA
AAGATCGAGGGCAAGGTCCTCTAAAAGGCGGCTGAAGCATTTTTTGGCTG
TAAAAATTGGATATGTCATTTTTAGGGGAAAAGAGCATTTCTCGCGATTG
GCTTCTTCATATTTTTTGCTGATTTTTTGTACAGTAATGCAAATGGTAAT
TTTTATAAACTGATGAAACCCGATTTTCAAAAAATAAGTTTTTTGGGCAA
ATTTGGATCGAAATGAAAATGTACCTAAAAATGGGGTTTTCTGGACTTTA
TGTGAAATTGCTTCATCACATTTTTCTAATTTTTTGGACAAAGATAGAAG
GCAAGATTCTCTAAAAAGTGGCTCAAGCAGTTTTTTCAAAAGTTTTTTTG
GCTGTAAAAATCGGATTTTCTTTTGGGGAAATTCCCTTTTGTCATATTTA
GGGAAAATGAGCATTACTCGAGATTGGCTCGACATTTTTTTGTATTTTTT
GCATTGGGACATAAAATGGTAATATTTCATTTCTGATGGAGCCCGATTTT
CAAAAAAATAATCTTTTAGGGCGAACTTGGGCTAAAAAGTGCCTAACATG
GGTTTTTTGGATTTTGGGGAAAATCACCTTTTATCGTCAATAGGGAAATC
ACGCTAAAATATTTATTCACCCCAGCATCTACGACTATAAGTCATACAAC
TTTAACTATACTTGACAGGTCGATATTAATTTGAGCTGTGATACTCACGT
TAATCTATTCAAGCTGCTCATCACTACACTTTCTTACTCTCTTGCTATTT
GTCCTATTTTTATCTGATTCTCATCATCAGGTAGGTCCATTCAGCATGTT
GCTTGTTCACATTAAATTGACACGGATGTGTAGCAAGATTGATCAGAGAG
ATTCTTTTGTTTATCAACACGAAATCGAACACAATACAACAATAGGCAGA
CACTGTCCTGATATGAAAAATGTGTCTGATATGAAACGGGGACACTTTAA
AGGACTACTTAGACTACACAATATATTGGTGATCAATATTCGACAATATA
GTTTTCGGACTATAATGCACGGGGTAAATAATAGGTGCTCTATTATAAAA
AGGAATTTTCTTTCTGTAAACAATCCCCCTATATTGTTGAAATATTGCAA
ATCGTGCTGACAATATATTGCGAACATCTTTTCAATATATTGCCGACATT
CAGCATATATTCTCAATATATTGCCCGACAATATATTGTGTAGTGTATGC
AGCCCTTAAACAAAAACCTTTAATTTTCAGGGTATTTTGACAATCAGCAT
CGTGATGGTGACCAGGTTGGTTTGGTTCATGTTTTTGTGCCTCCTGATCT
CCCAGCTTTCGGTATTTATGGTATGAAATTTCATTTCCTTAATTATATAC
AATCCACTCTCCCTAATTCGAACTTCTACGATTCAAATTGTTCTTTAATT
CGAATTAAGGCATTGTTTCCCTTCAGCTTGAAAGTATTGAAAAATGATTT
CTATAATTTGATGCAAAGTCTTAATTCCTTGAAGATCGAATTAGAGAGAG
GCAATTATAGGTACATACAAAAATCAACAGCATAGGCGTAGCGCGATACC
CTGCAAAATTTATGAGGGAGTGCAGACGTTTATGACATATTCATGATTTT
TTGATAAAACAAAGACGATAATTACAGTGTCGTAAAAACCGCTCTCATCC
ATAAATTTTGAAGGGTATCTCGCTCCGCCTAGAACAGTCCTAGTTGTATA
AATTGAAAAGAGACAATTCATATGAAGCATTCTCCATATTGTTCCAGTAA
CGTAGCCAAGGGGGCGCAAAATTTGTGACACGGTAATTATCTTTTATATT
ATGAATAGATAATTAAAGAGTAAAAATCTGCTCTCCTATACAAATTTTGC
CCCTCTTGTCTACGCTACTGTGTGCAATATATTGACGAACAATATTCGAC
AGTAACGTTTAAGCAACAGGTGCTCTATTGTAAAAAAGAATTTTCTATCT
GTAAACGACCGCCCCTAATATTGTTGGAATATTGTAAATCAAGCTAGTAA
TATATCCCAGACATCTTTTTCAATATATTGTGAGCACTTTACAACACACC
CCTGTCTCACAGCCCCGGTGGAACTTTTTTCCACAGGGGATAAAAGTTTC
TAATGATATCCCAATAGGGGTGAAAATTTTATTGTTCCAAGGTTAAAAAA
CGGGATGGTTTTGGAGTGCAAGTTTTAAACATTGAAATCCGAATGGGGAT
GAAATCAAAGTGAATTTCCGAGTGGGGGATGAAATTCCAGGGTATTTTTC
CCGCTGGGAAAACTGACAGGGGTGTCTTATTTTACTCAGTAAGTGAACCA
GCACTGAGCATTTGTTTATTTTTCAGCAGGTGGAATGGCTCCTATAAACA
TGTACCAAGAAACATTGCAGGCGGGTATCGAGGACAGTAAAAAGATTGTC
GAAGAATACAAAACATACTGTTTATCTAAAGGGGTATTTATATAATTAAA
GTTTGATTTTTAATTGATACAGATACCAAATTTTATGTTTTGTGTTATAA
CCAAAAGATAAGATCAGTGAAAATTAGTTAAAACCGTTATAACTAGCAAG
TATGGAATTCGAGAGATTTTCCAAATTTGAAAATTAATCTACTCGCATCG
CTATCATAGATTCTGAGACTCGAAAATTTCTTATTCATTCTGGTTCGTAG
TATTCTGAAATTTGCGATTTTTCTTTTTAGGTATCACCAAAATATTTCGT
GCAGTCTTTAAATGATTCAATTGGACATACAATTTGTGATATTGCAAAAC
AAAACAAAGCCAAGATGATGGTGCTCGGTCAAAGAGGCCTGGGTGCTATT
CGTAGAACATTTTTAGGAAGTGTGAGTGACTACGTCATACATCATGCACA
TATTCCTGTTTTGATCGTACCTCCAAAATAGTTGTTAAAATTTTTATGAA
TCACAACCCCAGCCGAATATTCTTTGAAAAGCTTGTTGTGTAGAGGTGTT
TTTTGGAGATATTGTCAGCAGCTCGTCACTTCTTGTCATTCATTCACCCT
TAGTCAGTAGATATATTATTTCAAACATATACGACAACCATTAAGTAATT
TTGATTTATATATAATTTTTTTTATTATTATTAAAATATTTTTGTAGTAA
TAACTTGTACTGTAATTTTTATGTAAATGAAATAGAAAATTTTTCTCTTC
GTCTTGGAATTATTGCCTGTCACCTTCCAAAAAGTATTCAAATGTCATTC
TATGTTTTTTTTTAAGTTTAAAACAAAAAGAGAAAATAATAAATATATAA
TACAAAGATGGCTCAGAACATTGAAAAAGTCACATTGAACCTGATCTGTG
TAGATGCTTGTGATCACAGTAAAAGAGCCATGGACTGTAAGTACTAAATT
TTCACTTTCTAATAGAGAGTCAAATTCCTTCGTTTGAAGTGGAAAATGAA
AATTGGAATTTTTGGAGTGACATTGTTGAGATAACGTCTTTTTTACAATC
ATGCCCGGGGGGGGGGTACTTAGGCAAATGGAGGGTACGGTACGGCCGCC
CTTAAGGATACCTTTTTTGGATTTCCAAAGTCCAGCTAAGGGTCGGAAAA
ATCAGAAAATCAAATTTCAGCCCCACTAAGGGTCGGAAAAATAGGAAAAT
TTCAACTTTTTACCCCCTGAAAGATCGAAATTTGGTCAAATTTGTCCCGC
TAAGGGTCGTAAAATTCCCGAAATTTTCCTTTGTTTTTTCCTTTTTAGTC
CCGGTAGGGGTAGCAAAGTTCGAAAGTCAGCTCGCAATTTCAATTTGGGA
GGGATTGGCAGACTTCCAAGAGGCTATATTCTGAGCCTTATTGCTTTTGG
ATCCTCAGATCCAAAGCTTCCAGGTGTTAAGTCTAGCGTTAAAGCTCAGA
GTTAAAACTCTACCCTTCGAACCTACTTTAGAGCACTTACAAATCGATTG
TGGTTTCAAAGCTTCCCGGTGAATTTCCCTTTTTTCTCAAATATTATGAC
CTTGATTGTAGCATTAACATTGATTAGTATCATTTTAAAAGTGAATTTAC
CACTCAATAGCATTCTCTCCACTTGGCAAAAGTGTCTTAACAGAAACACT
TAAATTGTTAATGGGCACGATACTCACAGGTACCTCTTGTATGTGAAATT
ATTATATCTCTTTACTGATTCAGGGTATTTGTCAACACTTCACCGTGAGG
GAGATGACGTCGGTTTAGTTCATATTCATTGTTTACCAGAGCTGCCTTCA
TTTGGTTTATATGGTATAACTTTGTCTATATATGAGATTTACTTTAAAGG
TTTCCGTTTCATATCAGACACATATTTCATATCAGGACAGTGTCTTGCTA
TTGTTATATTATGCTGATATAAGCAAAAAAAGTTTTTATTTTCCTTTTTC
TGACCAATCTTGCTCCGCATCCGTGTCAATCCAATGTAAAAAAGCTAGTG
AATTAAAATTGTTGAGTAAGCAACGATATCATTCTTATTTAAAAATAAAA
CCTTTAAGTTACTGCAGATCCATTATTAATTGATATAATTTGTCACAGTA
ATACATTTTAGTGAATTAAATATCCATTTTTTCCCATAATGAAAGCTAAA
CCTTCCTCCTTGCAATCCGGAGGCTAGCTTTTAGTTGACATCGTGCATAT
AGTCTTGGATGAGAATTCAAACGAATAGGAGTTTAAATCACTAAAAGTGA
TTACTCTAAAACCCAAGGATATTTTTGTTCGATTTAATGAAAATTTTAAC
GAAAACTAATTTACTGAGCAAAGTCAGCATAGTTTAGTCTGATTTTCATT
CTTTTCCTCTACTAGAAATGTTCGATTACAAACCGTATAATGCAGAATCC
TCCTTTATAGCTGGTGGTTTAATCGCTACCGATTTGTATCAAGAGCAAAT
TAAAGAAAGTATTCAAGCTAGCAAGAAGGTTGTTGAACAATACAAAAAGT
TCCTCGCGGAGAAAGAGGTGAGATGAACTTGTAGAACTTCTAGGTGGCAA
ATTAATTAAAATTCAAATACACTCGTTTATATTATAAATCCACGTAATCC
ATATTAAATATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGGGAGGTGGATTTTTTTCTCTTAATAATTAGCGG
GGGGACGTCTATTCGGGAGACAAGAGTAAATATGGTGACACGGATTGACG
TTCTATCTCCTTTCCGCAGTAGTGCCCATACATAAATCTTTCGAGCTTGC
TATATTATCCTTTTGGCTTTAGGTGTTTCTATATGGAGTATGCAGTGCTG
ACGAGTCCTAATAAAGACGAAATGCATATGCTGCTCTGCCACCCAAATCT
CCTGAGTGAATATAGTTGGACAGAAATTCTTATTTCTTCACATATATATG
TTTTAGTCATATTTACATTCAGTACTTTTGTTTAGATCACAGCAAAGATC
TATTGTCGCAGTATGATAGATTCAGTTGGTCACACAATATGTGAGATTGC
CAAAGAAAGTAATGCTACAACCATCATTATGGGTCAACGTGGTTTAGGTG
CCATTCGAAGAACGTTCTTGGGAAGTACCAGTGACTATGTGTTACATCAT
GCACATATCCCTGTGGCAGTTATTCCTCCCAACCAATGAACATCCATGGG
AAAGCTCGGCAGGAAAAGGTTTCGATGGATTTTATTAATCATAGATTAAT
AGACTGCTTTTAAAGGACTTTATCATCTTTGTAGTATTAAACATTTATTC
CTTCTTTATGATCTATATTTAATATGTAAACCGTAAACAAAATTTTATAC
TGTAAATACAATTTATCACAATAATGCATATAAAAATATCATTCAAAACA
AGTTGACAGCGTTTTCAATACCTTAGCCTATAATTTTCTATGAATGTTTT
TTGATGTCACTATACTAAATCGGTGAATTTTTTTTTGTTTCTCAGGAAAA
AGAATAAAAAGAGAAATACAATTAGAAATAAATAATCAACTAATTTGAAC
GAAAACATGTAATGGCATCAAAAGGCAATTTAAACCTGTTATGTGTCGAT
GGTAGCTCGCACAGTGATAGGGCTTTTGAATGTGAGTATCCTAATTCTAA
TTATTATCTTAAACATTATTGAAATTAATTTTAGAAGGAACTTATTTTGA
TTTTGACGAGGAAGCTTTTTTCAGTAAATTCAATATTTTGACACTTTGCA
ATAGCCGATTTAAGTCTAAACAGAGCTTTACGCCGAAAAAAAACATTTGG
ACGGCTTATTCTCAATAGTTGCTTATCTGTTCTTTGCTCTTATTGTAATT
CAATTCTCTTTATTTTCACAGGGTACTCTTCACATTACCATCGTGAAGGA
GATCGTATAGGAATATGCACCATACACGAGATTCCATATGTTCCTATGGG
TTTATATGGTAGGTTTGGTGTTTGGCTTGGAAAAGATCTAAACTTCCTAA
TTTTATATCTTTCTTATTCTCCTTTTATGGTGACTACAAAGAATGAATGT
TGAAAATAGACGATGTTATCGCCCGTTACAGTGATAGTAAAGGCGGGAAA
ATATGGCGTTATGGCGGTATACGGAAAAAATCGGCAGGAGAGTTTCGAAG
AAACGACTGGCAACTCTACCGACTGTTAACTCTTTTCGGCAAAAAAACCC
GTTTGCGAATTTTCTTCGGCTTTGGCCTTTTATTTTTAGATAGTGATTCG
TCTTAGACTATAAAATAGTCTAGTTAAAGCTCCACTTTCGCACGATTACT
TTCATCTTACAGAATAGCCTGAGTATTCAGGCTGTAGTAAACCTTTTTAA
ATTATTGATATTTCGGTTAACCGCCTGGTCTTCCTAAAAGAAGAAAGTTA
GCGCATGTCGTGTGTTATTGTTGTGAAGCTAAAAACTTTCTGACCCTGGG
TTTACAATCATCAAGGTAGATCAAGCTGTGAATAGCAGAAGCATCGCAAT
AAGAAATAATTTTCAGGCTACTTACTCTGCTGATATCGATGAGATAATGG
TATTTTATTAATCACTTTTTCACATTTCATTTTAGAGGATGGATTGATGC
TCTCAGAGGCAGCCTATCCACAACTTTTGAATGATAGTGTCAACAAAAGC
AAAGAAATTTGTGAAAAATTTAAACAACGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001448XLOC_001448Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002677-exon-sc0000021-1575043694:321707..321739TCONS_00002677-exon-sc0000021-1575043694:321707..321739Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:319393..319479TCONS_00002677-exon-sc0000021-1575043694:319393..319479Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:319149..319258TCONS_00002677-exon-sc0000021-1575043694:319149..319258Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:318078..318702TCONS_00002677-exon-sc0000021-1575043694:318078..318702Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:316420..316509TCONS_00002677-exon-sc0000021-1575043694:316420..316509Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:315307..315413TCONS_00002677-exon-sc0000021-1575043694:315307..315413Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:314404..315059TCONS_00002677-exon-sc0000021-1575043694:314404..315059Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:313527..313616TCONS_00002677-exon-sc0000021-1575043694:313527..313616Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:312823..312929TCONS_00002677-exon-sc0000021-1575043694:312823..312929Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:311609..312254TCONS_00002677-exon-sc0000021-1575043694:311609..312254Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:311282..311368TCONS_00002677-exon-sc0000021-1575043694:311282..311368Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1575043694:310558..310654TCONS_00002677-exon-sc0000021-1575043694:310558..310654Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:321707..321739TCONS_00002677-exon-sc0000021-1510915933:321707..321739Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:319393..319479TCONS_00002677-exon-sc0000021-1510915933:319393..319479Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:319149..319258TCONS_00002677-exon-sc0000021-1510915933:319149..319258Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:318078..318702TCONS_00002677-exon-sc0000021-1510915933:318078..318702Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:316420..316509TCONS_00002677-exon-sc0000021-1510915933:316420..316509Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:315307..315413TCONS_00002677-exon-sc0000021-1510915933:315307..315413Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:314404..315059TCONS_00002677-exon-sc0000021-1510915933:314404..315059Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:313527..313616TCONS_00002677-exon-sc0000021-1510915933:313527..313616Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:312823..312929TCONS_00002677-exon-sc0000021-1510915933:312823..312929Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:311609..312254TCONS_00002677-exon-sc0000021-1510915933:311609..312254Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:311282..311368TCONS_00002677-exon-sc0000021-1510915933:311282..311368Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1510915933:310558..310654TCONS_00002677-exon-sc0000021-1510915933:310558..310654Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:321707..321739TCONS_00002677-exon-sc0000021-1491911889:321707..321739Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:319393..319479TCONS_00002677-exon-sc0000021-1491911889:319393..319479Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:319149..319258TCONS_00002677-exon-sc0000021-1491911889:319149..319258Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:318078..318702TCONS_00002677-exon-sc0000021-1491911889:318078..318702Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:316420..316509TCONS_00002677-exon-sc0000021-1491911889:316420..316509Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:315307..315413TCONS_00002677-exon-sc0000021-1491911889:315307..315413Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:314404..315059TCONS_00002677-exon-sc0000021-1491911889:314404..315059Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:313527..313616TCONS_00002677-exon-sc0000021-1491911889:313527..313616Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:312823..312929TCONS_00002677-exon-sc0000021-1491911889:312823..312929Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:311609..312254TCONS_00002677-exon-sc0000021-1491911889:311609..312254Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:311282..311368TCONS_00002677-exon-sc0000021-1491911889:311282..311368Clytia hemisphaericaexon
TCONS_00002677-exon-sc0000021-1491911889:310558..310654TCONS_00002677-exon-sc0000021-1491911889:310558..310654Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:310558..321739 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000111019	0.0358237	0.0340189	0.017638	0	0	0	0	0.0916254	0	6.00369e-05	0	6.10481e-05	1.91918e-06	3.44169e-06	0.436967	0	0.121581	0	0	0	0	5.66278e-05	2.35581e-07	0	0	0	0.210296	0.0493074	5.83617e-07
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002677 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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