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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002067 ID=TCONS_00002067|Name=TCONS_00002067|organism=Clytia hemisphaerica|type=transcript|length=3585bp CTGAAACATAATGTCATTTTAAATCAGACAAAGACACAAGAAGGTTAACA AGAAGGTTACAAGAATATCCAACGACCATGGAAGGTCTATTATTGACGCT GCTTTTGATATGCTCGATTTCATTACCTTCAGAAGCTCAGAGCACTACTC TTTCGCCTGCAAACACTACCAACTCTCTCAATACAACTACTACTTCTCCT TTTACGACTACAACAACAGTCACGACCACAACCACTACCCCTCCTCCAAC CACAACCACGACTCTTCCTCCAACTACAACCACAACCACTACCCCTCCTC CAACTACAACCACTACCCCTCATCCAACTACAACCACTACCACTCCTCCA ACTACAACCACTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAAG TACAACCACTACCCATCCTCCAACTACAACCACTACCCCTCCTCCAACTA CAACCACTACCCCTCCTCCAACTACAACCACTACCACTCCTCCAACAACA ACCACTACCCCTCCTCCAACTACAACTACTACCCCTCCTCCAACTACAAC CACTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACTA CTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACCACT ACCACTCCTCCAACTACAACTACTACCCCTCATCCAACTACAACTACTAC CCCTCCTCCAACTGCAACTACGACCACTACCCCTTCTCCAACTACAACTA CAACTACAACCACTACACCTCCCCCAACTACGACCACAACCACTGCCCTT CCTCCAACTACAACTACAACCACTACCCCTCCTCCAACTACAACTACAAC CACTACCCTTCCTCCAACTACAACCACTACACTTCCTCAAACTACAACCA CTACTCTTCCTCCAACTACAACCACAACCACTACCCCTCCTCCAACTACG ACCACTTCCCCTCCTCCAACTACGACCACTACAACCATCTCTCCTCCAAC CACAACCACTTCCCCTCAATCAACTACTATCACTTCTCCTCCAGAAGACT CGACTCTTACCATTACAACCTCAACGAATACAACAACACCGGAGCCTGTA ATCTTCGCAAACAAtatcatattcaaatttgttgACGATTACTCGTCTAC CATCATTAAAGCAGGTGGGAAAGATGCAGCTGAACAGGCCATTTGTGAGA ATTGTCGAGACGAGTTGAATATACCTGAGAAGGATTTCCATAATTGTTCT ATCAGTGAAGGCAGTGTCAAAGTGACGTTCATTATGAATCAAACAGCCTT CTTCGCCAACCACACCGTTCGTAAGTTGAATATGATGGTTAAAGACGATC TCTTCCAAGTCATGATCGGTGGCTATCGGTTGACAACAAAACCAGGATCG GTCTTGATAGACAGTGTCATGCAAACAGCATCATCTGATCAGCAAAACAC ACCATCACCTGTGATATCGGCAAATACCGACACCGACGGAGATGACGACG ATGATGACGGTTCTTTGATCGCAATCGTTATCTTAATCATTATCATCATC CTAATCATCATTCTGGTCCTCATTTTATTGTGGATGATCAGAAAACGAAA AACTATCACCGATGAGAAGGTTTGTAAATATCTTTTATATATCAAGAACG AGCTGATGTTGAACTGACAATATCAGAAGTGTCTTATCTGATCTCAATAT TATCCATTATGTCTTTTTATAACGAATGCTCCATACAAAGCACACACAAA ATAAACGGCAAGAGGTATATTCTAGCCTTTTTAATACATAATCAAGGGCA TAAATATCTAAATTGAGTATTAAGTAACAATTAACAAGATCTGTTTCGAT TATTTTCAGCAGCCTGACGAAGAAGCAAGCAGAGGGGCAACATCCTTATC AGCAGAGACAAACGACACTTTTGACAACGGTAAGGGTGATTTATTTCTCA AAGTATAATAGGAAAGATTCTAGATTCTAATCATTTCTGAACAATTGGTT AGCAATAGGAGTGGGGTAGAACGCTTAGCAGTTTTCAAAGAGGCGAAAAG TGATACACGCTCAATTCGATGTAGGTGGCGCACGGATGTTTGCAAATGAT CTAATTAATTCCTTTATTTACAGAATTGAAGAGTGAAGCAACATTGGGTC GAATCAACTTTGGCTCCAATTTTAACGATGATGAAGTCCATGTAAATGAA CAATGGCAGGGGCTGAGTCAGATACAATATTTGTATGGAACCGACAGAGA ATGGAAATTCGAAGATGACGAAATATCGACAGTTGATGTGGACGCGACGA GTCGTATTCGATTCTTGTTTGAAAGTCAGAACTCCTTACGACATCTTATC GACGAGATGAAAGAGGGTGACGAGGGGCGAACTATTTATGATGAAGATGG AACTGAAATGGAAACATACCGTTCAAATGGCGGAGGGGCGGAAAACCCAC CATCCTCGGGCGCAAGTGATGATAAtcaagatgaaaatgaaaataacgaT GACGAAATGGATAATACCAATGAAGAGGATAATGATAGTGATGATGATTC TAGTCCTCAAAGTAGTAGCCCTAACAAAGAACCACCTGCTCGGCCACCGC CCCCAGGACGCCCGAAGCGCCCTCTTCCACCATCAAGGGATTCTTCAAAT GTGTGATAAGAACTGTTTTAAGATTAATTTTAGTAAATATTTTGTACATA AAGAGTATTTTTATGAGTAGAgataaaaatatatgaaaatgaTAATGTAA TATTTCTACCTTGTCATGCGTTGGTTGATTTTTAAGTCCCCCAAAAAAGA ATAGATGAAATCGTTGGCCCAATTCGAAAATTTGGTAGAAAAAGTCTTTT TAGTTGGTACCCTCGAAGAAAATCTCCCCCTCCGTCTCTTCGAACATTTA GAAATCGGGAATAGGTCACAATACACTTTTTAACGATATTTTATCCAAAT ATTTATGAAAAGTCAAACTTAGAAATATGGTTAACGATACTAAAGACTAC TCATTCTCAAAATTTGTGTTCGCACAACACGAGAAGGGAAGAAAGTTATT CTTAATTTTGCTCAAAAAGGCTTTTAATGCAAAGTCAGAAGTCTTTtaca aatacagttgacgctctttaattcgatcttcaaagagaattggattttca tcgaataaggggccttatcgaataaaggagcgtcgtttatgagagtttcc tgttgacggggactttcaatattatcgaataagggagcctatcgaatagt agaacgtcgaattagagggCGTCAACAATAAGTTTTTTTCCTTGATTACA CCAAACAGACTATTAAAAATTAACTAGCCACCATTATGGAATAAAGTGTT TGAGATACGGACTTCTTACGCAAAACCGAACGTTTTCTTCTGAAGAAACt ttggcgggaatttgatgTTACCGCTTAAAAGCGTGACTTAAGGCATGAAA TAACATAAATTCAGGAAATATGTATTCTCGATCATTGAACggttatttta taagaatgttccaTTTCCATTTCATCGTGGAAATTCTTGAATTCTGGGGg gaatcatcctaaaatattcttacggtattagTATA Run BLAST on NCBI transcript from alignment at sc0000018:757659..761365+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002067 ID=TCONS_00002067|Name=TCONS_00002067|organism=Clytia hemisphaerica|type=transcript|length=3707bp|location=Sequence derived from alignment at sc0000018:757659..761365+ (Clytia hemisphaerica) CTGAAACATAATGTCATTTTAAATCAGACAAAGACACAAGAAGGTTAACA
AGAAGGTTACAAGAATATCCAGTAAGTACTGATTTGAGTTTTATCTTTAC
AACTGATTACAGCAATCTCGTGCAAGAAGTGAAAATGATTTGATGATCAA
AGAAACTTCTaatgaattatttttgtttCGTTTTAATTTTCAGACGACCA
TGGAAGGTCTATTATTGACGCTGCTTTTGATATGCTCGATTTCATTACCT
TCAGAAGCTCAGAGCACTACTCTTTCGCCTGCAAACACTACCAACTCTCT
CAATACAACTACTACTTCTCCTTTTACGACTACAACAACAGTCACGACCA
CAACCACTACCCCTCCTCCAACCACAACCACGACTCTTCCTCCAACTACA
ACCACAACCACTACCCCTCCTCCAACTACAACCACTACCCCTCATCCAAC
TACAACCACTACCACTCCTCCAACTACAACCACTACCCCTCCTCCAACTA
CAACCACTACCCCTCCTCCAAGTACAACCACTACCCATCCTCCAACTACA
ACCACTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAAC
CACTACCACTCCTCCAACAACAACCACTACCCCTCCTCCAACTACAACTA
CTACCCCTCCTCCAACTACAACCACTACCCCTCCTCCAACTACAACCACT
ACCCCTCCTCCAACTACAACTACTACCCCTCCTCCAACTACAACCACTAC
CCCTCCTCCAACTACAACCACTACCACTCCTCCAACTACAACTACTACCC
CTCATCCAACTACAACTACTACCCCTCCTCCAACTGCAACTACGACCACT
ACCCCTTCTCCAACTACAACTACAACTACAACCACTACACCTCCCCCAAC
TACGACCACAACCACTGCCCTTCCTCCAACTACAACTACAACCACTACCC
CTCCTCCAACTACAACTACAACCACTACCCTTCCTCCAACTACAACCACT
ACACTTCCTCAAACTACAACCACTACTCTTCCTCCAACTACAACCACAAC
CACTACCCCTCCTCCAACTACGACCACTTCCCCTCCTCCAACTACGACCA
CTACAACCATCTCTCCTCCAACCACAACCACTTCCCCTCAATCAACTACT
ATCACTTCTCCTCCAGAAGACTCGACTCTTACCATTACAACCTCAACGAA
TACAACAACACCGGAGCCTGTAATCTTCGCAAACAAtatcatattcaaat
ttgttgACGATTACTCGTCTACCATCATTAAAGCAGGTGGGAAAGATGCA
GCTGAACAGGCCATTTGTGAGAATTGTCGAGACGAGTTGAATATACCTGA
GAAGGATTTCCATAATTGTTCTATCAGTGAAGGCAGTGTCAAAGTGACGT
TCATTATGAATCAAACAGCCTTCTTCGCCAACCACACCGTTCGTAAGTTG
AATATGATGGTTAAAGACGATCTCTTCCAAGTCATGATCGGTGGCTATCG
GTTGACAACAAAACCAGGATCGGTCTTGATAGACAGTGTCATGCAAACAG
CATCATCTGATCAGCAAAACACACCATCACCTGTGATATCGGCAAATACC
GACACCGACGGAGATGACGACGATGATGACGGTTCTTTGATCGCAATCGT
TATCTTAATCATTATCATCATCCTAATCATCATTCTGGTCCTCATTTTAT
TGTGGATGATCAGAAAACGAAAAACTATCACCGATGAGAAGGTTTGTAAA
TATCTTTTATATATCAAGAACGAGCTGATGTTGAACTGACAATATCAGAA
GTGTCTTATCTGATCTCAATATTATCCATTATGTCTTTTTATAACGAATG
CTCCATACAAAGCACACACAAAATAAACGGCAAGAGGTATATTCTAGCCT
TTTTAATACATAATCAAGGGCATAAATATCTAAATTGAGTATTAAGTAAC
AATTAACAAGATCTGTTTCGATTATTTTCAGCAGCCTGACGAAGAAGCAA
GCAGAGGGGCAACATCCTTATCAGCAGAGACAAACGACACTTTTGACAAC
GGTAAGGGTGATTTATTTCTCAAAGTATAATAGGAAAGATTCTAGATTCT
AATCATTTCTGAACAATTGGTTAGCAATAGGAGTGGGGTAGAACGCTTAG
CAGTTTTCAAAGAGGCGAAAAGTGATACACGCTCAATTCGATGTAGGTGG
CGCACGGATGTTTGCAAATGATCTAATTAATTCCTTTATTTACAGAATTG
AAGAGTGAAGCAACATTGGGTCGAATCAACTTTGGCTCCAATTTTAACGA
TGATGAAGTCCATGTAAATGAACAATGGCAGGGGCTGAGTCAGATACAAT
ATTTGTATGGAACCGACAGAGAATGGAAATTCGAAGATGACGAAATATCG
ACAGTTGATGTGGACGCGACGAGTCGTATTCGATTCTTGTTTGAAAGTCA
GAACTCCTTACGACATCTTATCGACGAGATGAAAGAGGGTGACGAGGGGC
GAACTATTTATGATGAAGATGGAACTGAAATGGAAACATACCGTTCAAAT
GGCGGAGGGGCGGAAAACCCACCATCCTCGGGCGCAAGTGATGATAAtca
agatgaaaatgaaaataacgaTGACGAAATGGATAATACCAATGAAGAGG
ATAATGATAGTGATGATGATTCTAGTCCTCAAAGTAGTAGCCCTAACAAA
GAACCACCTGCTCGGCCACCGCCCCCAGGACGCCCGAAGCGCCCTCTTCC
ACCATCAAGGGATTCTTCAAATGTGTGATAAGAACTGTTTTAAGATTAAT
TTTAGTAAATATTTTGTACATAAAGAGTATTTTTATGAGTAGAgataaaa
atatatgaaaatgaTAATGTAATATTTCTACCTTGTCATGCGTTGGTTGA
TTTTTAAGTCCCCCAAAAAAGAATAGATGAAATCGTTGGCCCAATTCGAA
AATTTGGTAGAAAAAGTCTTTTTAGTTGGTACCCTCGAAGAAAATCTCCC
CCTCCGTCTCTTCGAACATTTAGAAATCGGGAATAGGTCACAATACACTT
TTTAACGATATTTTATCCAAATATTTATGAAAAGTCAAACTTAGAAATAT
GGTTAACGATACTAAAGACTACTCATTCTCAAAATTTGTGTTCGCACAAC
ACGAGAAGGGAAGAAAGTTATTCTTAATTTTGCTCAAAAAGGCTTTTAAT
GCAAAGTCAGAAGTCTTTtacaaatacagttgacgctctttaattcgatc
ttcaaagagaattggattttcatcgaataaggggccttatcgaataaagg
agcgtcgtttatgagagtttcctgttgacggggactttcaatattatcga
ataagggagcctatcgaatagtagaacgtcgaattagagggCGTCAACAA
TAAGTTTTTTTCCTTGATTACACCAAACAGACTATTAAAAATTAACTAGC
CACCATTATGGAATAAAGTGTTTGAGATACGGACTTCTTACGCAAAACCG
AACGTTTTCTTCTGAAGAAACtttggcgggaatttgatgTTACCGCTTAA
AAGCGTGACTTAAGGCATGAAATAACATAAATTCAGGAAATATGTATTCT
CGATCATTGAACggttattttataagaatgttccaTTTCCATTTCATCGT
GGAAATTCTTGAATTCTGGGGggaatcatcctaaaatattcttacggtat
tagTATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00002067-exon-sc0000018-1491911889:757659..757729 | TCONS_00002067-exon-sc0000018-1491911889:757659..757729 | Clytia hemisphaerica | exon |
TCONS_00002067-exon-sc0000018-1510915933:757659..757729 | TCONS_00002067-exon-sc0000018-1510915933:757659..757729 | Clytia hemisphaerica | exon |
TCONS_00002067-exon-sc0000018-1575043694:757659..757729 | TCONS_00002067-exon-sc0000018-1575043694:757659..757729 | Clytia hemisphaerica | exon |
TCONS_00002067-exon-sc0000018-1491911889:757852..761365 | TCONS_00002067-exon-sc0000018-1491911889:757852..761365 | Clytia hemisphaerica | exon |
TCONS_00002067-exon-sc0000018-1510915933:757852..761365 | TCONS_00002067-exon-sc0000018-1510915933:757852..761365 | Clytia hemisphaerica | exon |
TCONS_00002067-exon-sc0000018-1575043694:757852..761365 | TCONS_00002067-exon-sc0000018-1575043694:757852..761365 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000018 | supercontig | sc0000018:757659..761365 + |
Blast
The following BLAST results are available for this feature:
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