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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002065 ID=TCONS_00002065|Name=TCONS_00002065|organism=Clytia hemisphaerica|type=transcript|length=1718bp
ACTACCCTTCCTCCAACTACAACCACTACCACTACCCCTCTTCCAACTAC
AACTACTACTCTTCCTCCAAATACAACCACAACCACTACCCCTCCTCCAA
CTACAACTACAACCACTACACTCCCTCCAACTACAACAACTACTCTTCCT
CCAACTACAACCACTACCCCTCCTCAAACTACAACCACTACCCCTCCTCC
AACTACAACCACAACCACTACCCCAACTCTAACTCCAGCCACAACTACTA
CCCCTCCTCCTACTATATCTACAGCCCCATCTACGGAAACTTCAAACCTA
ACAACAAATGGAACTTCAATTGCAAGCAATGGGACAAACAATGAGACTTC
ATCCGAAGAAACAGGAACAAGCGGAATAAACGAGGATACCACTATTCATG
ACAGTGTTATGAGATTcaaattcattgaaaaatatgaaacgCTAATTACA
GAGTACGGCAGCATGGAAGCAGCTACAGAGAAGATTTGCAACGACACAAG
AGAAAACTTAAAATTGGAAGTGGATCAATTCGGTAACTGCAATCTGACTA
AAGGCAGTATCGTCGTGTCTTTTCAAGTTATTCTAACTGGAAACAAATAC
AACCAAACACTCAGAAGATTGAATTTGTTTGTATACAACAATTTGTTCAC
AGTGAAGAGGCCTGATGGAACAAAGTACAATACAGTGCCTTCTTCAGTTT
ATGCAGATGATGTGCACCAGGTGGAATCAGGGGGCGGAGTGGCGGAGGAA
TATGGGAACGAGGTTGTTGAGAAGAAGACGAGTGATGATGAATGCATTGT
GATTGCTTTGCtcgtttttttcattgtttgtgGCATCATATTGGTCCTCA
TCTTGCTTTACTTCTTGTTAAGgaagaaaaaacatcaaaaagttcTTCCA
ATCGAAGAAGAAGATGAGAAGAAGGAACAATATCTTCACCCGATGCCCTG
GTTCTACTCACCACCTCCTAAAGAAGATATAGGTCAGTTTTACATAGCTT
CATATNGACAATACATTCACCCGATGCCCTGGTTCTACTCACCACCCCCT
AAAGAAGATAAAGcctATGACGATAATGACGAGGCATTAGCAGATGTAAG
GAGGTTGTATGGAAGTAAATGGGTACTTGAAGAGGACGATCAGGTCTACA
ACGTCccaaaagacaaagaagaagaagatggaaGTGCTGAGTTGGATATT
CGAAGATTGTACCGAAGTCGTTGGATTTTAAGTGAGGAAGCAGTAGAAGA
TGAGTTGTCTTTTTCACAACAAGAAGATGAGGAAGATGACGAAATTGAAG
GAGACATTCGACGTTTGTATCAAAGTCGTTGGACATTGAAAGATGAACCC
TTATTATTGCATCCTTCTAGTGCTTTATCCCATAGACCTCATTCTTCAAG
AGCAAGTTCAGCGAGAACTTCTGCTCGTGGGAGTAGTATCTCTTTACAAT
CGAGCACAAACTCGCTGAAAGATAGCCAAATCTAGGCTATTATGGTTTAT
GAGAACTTATGTTGTTATGACAAAGTTTATGGGAAACTAAATTCAATATA
ATTGTATGTAAAGTATTCTTAACAAGTTTATAATAGATTTTTCATGCTGA
GAAAGTCGAACATTTCCACACGGGCCAAATCTGGCCAactctatattttt
attttttgcggTGTTGCTAtgacaaacaataaaaaaaatcgtaTAATAAG
TCATtaataattcacttt Run BLAST on NCBI transcript from alignment at sc0000018:754157..756023+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002065 ID=TCONS_00002065|Name=TCONS_00002065|organism=Clytia hemisphaerica|type=transcript|length=1867bp|location=Sequence derived from alignment at sc0000018:754157..756023+ (Clytia hemisphaerica)
ACTACCCTTCCTCCAACTACAACCACTACCACTACCCCTCTTCCAACTAC
AACTACTACTCTTCCTCCAAATACAACCACAACCACTACCCCTCCTCCAA
CTACAACTACAACCACTACACTCCCTCCAACTACAACAACTACTCTTCCT
CCAACTACAACCACTACCCCTCCTCAAACTACAACCACTACCCCTCCTCC
AACTACAACCACAACCACTACCCCAACTCTAACTCCAGCCACAACTACTA
CCCCTCCTCCTACTATATCTACAGCCCCATCTACGGAAACTTCAAACCTA
ACAACAAATGGAACTTCAATTGCAAGCAATGGGACAAACAATGAGACTTC
ATCCGAAGAAACAGGAACAAGCGGAATAAACGAGGATACCACTATTCATG
ACAGTGTTATGAGATTcaaattcattgaaaaatatgaaacgCTAATTACA
GAGTACGGCAGCATGGAAGCAGCTACAGAGAAGATTTGCAACGACACAAG
AGAAAACTTAAAATTGGAAGTGGATCAATTCGGTAACTGCAATCTGACTA
AAGGCAGTATCGTCGTGTCTTTTCAAGTTATTCTAACTGGAAACAAATAC
AACCAAACACTCAGAAGATTGAATTTGTTTGTATACAACAATTTGTTCAC
AGTGAAGAGGCCTGATGGAACAAAGTACAATACAGTGCCTTCTTCAGTTT
ATGCAGATGATGTGCACCAGGTGGAATCAGGGGGCGGAGTGGCGGAGGAA
TATGGGAACGAGGTTGTTGAGAAGAAGACGAGTGATGATGAATGCATTGT
GATTGCTTTGCtcgtttttttcattgtttgtgGCATCATATTGGTCCTCA
TCTTGCTTTACTTCTTGTTAAGgaagaaaaaacatcaaaaagttcTTCCA
ATCGAAGAAGAAGATGAGAAGAAGGAACAATATCTTCACCCGATGCCCTG
GTTCTACTCACCACCTCCTAAAGAAGATATAGGTCAGTTTTACATAGCTT
CATATNGACAATACATTCACCCGATGCCCTGGTTCTACTCACCACCCCCT
AAAGAAGATAAAGGTCAGTTTTACATAGCTTCATATTGCTTTAAGGAGGA
ATCTTTAAGGCATTTAGTTACCATAATACAAAACGAAAGCTCGAAGATCT
TTCTGAACTACAGTCTCATAGCATTTGCAACAGAGTGTAtactgtatttt
tttatttttcagcctATGACGATAATGACGAGGCATTAGCAGATGTAAGG
AGGTTGTATGGAAGTAAATGGGTACTTGAAGAGGACGATCAGGTCTACAA
CGTCccaaaagacaaagaagaagaagatggaaGTGCTGAGTTGGATATTC
GAAGATTGTACCGAAGTCGTTGGATTTTAAGTGAGGAAGCAGTAGAAGAT
GAGTTGTCTTTTTCACAACAAGAAGATGAGGAAGATGACGAAATTGAAGG
AGACATTCGACGTTTGTATCAAAGTCGTTGGACATTGAAAGATGAACCCT
TATTATTGCATCCTTCTAGTGCTTTATCCCATAGACCTCATTCTTCAAGA
GCAAGTTCAGCGAGAACTTCTGCTCGTGGGAGTAGTATCTCTTTACAATC
GAGCACAAACTCGCTGAAAGATAGCCAAATCTAGGCTATTATGGTTTATG
AGAACTTATGTTGTTATGACAAAGTTTATGGGAAACTAAATTCAATATAA
TTGTATGTAAAGTATTCTTAACAAGTTTATAATAGATTTTTCATGCTGAG
AAAGTCGAACATTTCCACACGGGCCAAATCTGGCCAactctatattttta
ttttttgcggTGTTGCTAtgacaaacaataaaaaaaatcgtaTAATAAGT
CATtaataattcacttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002065-exon-sc0000018-1491911889:754157..755219 | TCONS_00002065-exon-sc0000018-1491911889:754157..755219 | Clytia hemisphaerica | exon |
| TCONS_00002065-exon-sc0000018-1510915933:754157..755219 | TCONS_00002065-exon-sc0000018-1510915933:754157..755219 | Clytia hemisphaerica | exon |
| TCONS_00002065-exon-sc0000018-1575043694:754157..755219 | TCONS_00002065-exon-sc0000018-1575043694:754157..755219 | Clytia hemisphaerica | exon |
| TCONS_00002065-exon-sc0000018-1491911889:755369..756023 | TCONS_00002065-exon-sc0000018-1491911889:755369..756023 | Clytia hemisphaerica | exon |
| TCONS_00002065-exon-sc0000018-1510915933:755369..756023 | TCONS_00002065-exon-sc0000018-1510915933:755369..756023 | Clytia hemisphaerica | exon |
| TCONS_00002065-exon-sc0000018-1575043694:755369..756023 | TCONS_00002065-exon-sc0000018-1575043694:755369..756023 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018 | supercontig | sc0000018:754157..756023 + |
Blast
The following BLAST results are available for this feature:
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