XLOC_001085 (gene) - C. hemisphaerica

Overview
NameXLOC_001085
Unique NameXLOC_001085
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:753866..756023+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001085 ID=XLOC_001085|Name=XLOC_001085|organism=Clytia hemisphaerica|type=gene|length=2158bp|location=Sequence derived from alignment at sc0000018:753866..756023+ (Clytia hemisphaerica)
ACCACTACACCTCCTCCAACTACAACCACAACAACTACATCTCCTCCAAC
TACAACCACAACCACTACTCCTCCGCCAACCACTACCACAACCACTACCC
ATCCTCCAACTACAACCACAACCACTACCCCTCCGCCAAACACTACCACA
ACCACTACCCCTCCTCCAACTACAACCATTACACTTCCTCCAACTACAAC
AACTACACCTCCCCCaactacaactacaacaactACACCTCCCCCAACTA
CAACTATAACCACTACCCTTCCCCCAACTACGACCACAACCACTACCCTT
CCTCCAACTACAACCACTACCACTACCCCTCTTCCAACTACAACTACTAC
TCTTCCTCCAAATACAACCACAACCACTACCCCTCCTCCAACTACAACTA
CAACCACTACACTCCCTCCAACTACAACAACTACTCTTCCTCCAACTACA
ACCACTACCCCTCCTCAAACTACAACCACTACCCCTCCTCCAACTACAAC
CACAACCACTACCCCAACTCTAACTCCAGCCACAACTACTACCCCTCCTC
CTACTATATCTACAGCCCCATCTACGGAAACTTCAAACCTAACAACAAAT
GGAACTTCAATTGCAAGCAATGGGACAAACAATGAGACTTCATCCGAAGA
AACAGGAACAAGCGGAATAAACGAGGATACCACTATTCATGACAGTGTTA
TGAGATTcaaattcattgaaaaatatgaaacgCTAATTACAGAGTACGGC
AGCATGGAAGCAGCTACAGAGAAGATTTGCAACGACACAAGAGAAAACTT
AAAATTGGAAGTGGATCAATTCGGTAACTGCAATCTGACTAAAGGCAGTA
TCGTCGTGTCTTTTCAAGTTATTCTAACTGGAAACAAATACAACCAAACA
CTCAGAAGATTGAATTTGTTTGTATACAACAATTTGTTCACAGTGAAGAG
GCCTGATGGAACAAAGTACAATACAGTGCCTTCTTCAGTTTATGCAGATG
ATGTGCACCAGGTGGAATCAGGGGGCGGAGTGGCGGAGGAATATGGGAAC
GAGGTTGTTGAGAAGAAGACGAGTGATGATGAATGCATTGTGATTGCTTT
GCtcgtttttttcattgtttgtgGCATCATATTGGTCCTCATCTTGCTTT
ACTTCTTGTTAAGgaagaaaaaacatcaaaaagttcTTCCAATCGAAGAA
GAAGATGAGAAGAAGGAACAATATCTTCACCCGATGCCCTGGTTCTACTC
ACCACCTCCTAAAGAAGATATAGGTCAGTTTTACATAGCTTCATATNGAC
AATACATTCACCCGATGCCCTGGTTCTACTCACCACCCCCTAAAGAAGAT
AAAGGTCAGTTTTACATAGCTTCATATTGCTTTAAGGAGGAATCTTTAAG
GCATTTAGTTACCATAATACAAAACGAAAGCTCGAAGATCTTTCTGAACT
ACAGTCTCATAGCATTTGCAACAGAGTGTAtactgtatttttttattttt
cagcctATGACGATAATGACGAGGCATTAGCAGATGTAAGGAGGTTGTAT
GGAAGTAAATGGGTACTTGAAGAGGACGATCAGGTCTACAACGTCccaaa
agacaaagaagaagaagatggaaGTGCTGAGTTGGATATTCGAAGATTGT
ACCGAAGTCGTTGGATTTTAAGTGAGGAAGCAGTAGAAGATGAGTTGTCT
TTTTCACAACAAGAAGATGAGGAAGATGACGAAATTGAAGGAGACATTCG
ACGTTTGTATCAAAGTCGTTGGACATTGAAAGATGAACCCTTATTATTGC
ATCCTTCTAGTGCTTTATCCCATAGACCTCATTCTTCAAGAGCAAGTTCA
GCGAGAACTTCTGCTCGTGGGAGTAGTATCTCTTTACAATCGAGCACAAA
CTCGCTGAAAGATAGCCAAATCTAGGCTATTATGGTTTATGAGAACTTAT
GTTGTTATGACAAAGTTTATGGGAAACTAAATTCAATATAATTGTATGTA
AAGTATTCTTAACAAGTTTATAATAGATTTTTCATGCTGAGAAAGTCGAA
CATTTCCACACGGGCCAAATCTGGCCAactctatatttttattttttgcg
gTGTTGCTAtgacaaacaataaaaaaaatcgtaTAATAAGTCATtaataa
ttcacttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002064TCONS_00002064Clytia hemisphaericatranscript
TCONS_00002065TCONS_00002065Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002064-proteinTCONS_00002064-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:753866..756023 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14	0.14	0.03	0.03	0.06	0.13	0.15	0	0.1	0.1	0.14	0.07	1.3	1.67	0	0.06	0.02	0.07	4.5	5.08	0.02	0.03	0.13	0.19	0.29	1.52	0.03	0	0.1	0.11