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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001849 ID=TCONS_00001849|Name=TCONS_00001849|organism=Clytia hemisphaerica|type=transcript|length=1436bp
GCGGGAGAGATACGACTTGAGTTGGCTATTATGAAAATTCTCACAAACAT
TTTTAACTATTCACTTACTCGCCTAGTCTTCAAATGCAGGGGATTGGCAC
TTCTGTAGGAAGAAGAAATTATAAAATTCAACACACATCTCACACCATCA
TCATTATCACCAACAAAAGCATCACCAATGAGAATTATGATGCATAATCA
ACCGTGTCATCAATTTTACAGTGTAGATGGTATCTTATCCGCAATGTCCC
CTTCACACCAGCAACGGCACTGTGAGCAATCGGTAGTATCGGGCGGCGGT
GGACAGCCAATGCCACCACCttcacattcaccagcaccatacTGGCATGC
TGGGAGTCATTATGGAGCAGAACACAGCGCAATAACCCATGGCTATCCTC
CACCATACGCACGCCGAGGTCATCGAAGGAATCGAACCACATTCACACGA
CAACAACTCGAAGAACTCGAAAAATTATTCGATAGCACGCATTATCCCGA
TGTTTTCGCGAGAGAAGAGTTAGCATCAAGGATCAGTTTAACAGAGGCTA
GAGTACAGGTATGGTTCCAAAATCGTCGTGCAAAGTTTCGTAAAACAAGC
GAGAAAAACAAACGGAAATCGAATTCTACGTCATCATCTtcatcaaccaa
tcaaaatacagATCTTTCATCAACAGCCAATCAAATGGCAACTACAAACA
ATAACAACAATAGTACtataaataataacaataatggtgAAACAGTGATC
GATAAACAATCGAATGAAGTCGATGAACAAATTCGATTGAAAAACGATTC
AATCGAATCAACAGAAAAACAAATTCTCGATCATAACACACGATTACCTG
AAGACATAAACAATAAATATAACTCGACTGCTCCCCGGCTGACACACCCA
CCGTACACCTTTCATACTTATCAAGGCACGTACTGTCCTTCATCATATGG
CTCTATGGAGCCGCGCGTCGTAAATGGAGTCTCATACCCTGTATCTGTTG
AAGGTGTCAAGGGTGAAAGCTATGGCCGTAACACTCTAGTAAATAATGGT
GATTTAGACTGGCGGGCTTAGGAGCTACTAAAAATGCTTATATTTCTAGT
TTTTTTGCTATGTAAAtatcttaaaaagaaaattttatgaagaCGTGATA
TAACATAGAAAGCATTATTTCCTATTTATATCTTTATTAtggtttttgaa
aactttaatcGACACTTTAAATTGTTGAGGGTGTACCGtaaaattttgta
tattttagATGTATGTTTTAGAGGGATCATTTTTATCGGTTTTTATTATA
TTCCAAGTTAtctttttaccaaaaatataTACTATTTGATTTTTAGAACG
TGTTGAGtaaaatttttatatgattGATTAATAATTTCTTGATATTCATA
ATGTAATCTTTAATTGACAAATCGTTTCAAAATATA Run BLAST on NCBI protein sequence of TCONS_00001849-protein >TCONS_00001849-protein ID=TCONS_00001849-protein|Name=TCONS_00001849-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
MRIMMHNQPCHQFYSVDGILSAMSPSHQQRHCEQSVVSGGGGQPMPPPSH
SPAPYWHAGSHYGAEHSAITHGYPPPYARRGHRRNRTTFTRQQLEELEKL
FDSTHYPDVFAREELASRISLTEARVQVWFQNRRAKFRKTSEKNKRKSNS
TSSSSSTNQNTDLSSTANQMATTNNNNNSTINNNNNGETVIDKQSNEVDE
QIRLKNDSIESTEKQILDHNTRLPEDINNKYNSTAPRLTHPPYTFHTYQG
TYCPSSYGSMEPRVVNGVSYPVSVEGVKGESYGRNTLVNNGDLDWRA Run BLAST on NCBI transcript from alignment at sc0000012:939944..947157+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001849 ID=TCONS_00001849|Name=TCONS_00001849|organism=Clytia hemisphaerica|type=transcript|length=7214bp|location=Sequence derived from alignment at sc0000012:939944..947157+ (Clytia hemisphaerica)
GCGGGAGAGATACGACTTGAGTTGGCTATTATGAAAATTCTCACAAACAT
TTTTAACTATTCACTTACTCGCCTAGTCTTCAAATGCAGGGGATTGGCAC
TTCTGTAGGAAGGTATTGCGatactttgtttttgtttgtttttgtatttg
cTTTCACCTATGCTTTCACTAATGTTTACTGACACTAAACCAATCAGAGC
GTGCTCTTCAATTGGCATCCATGTTTCAGAGAAATCAACTTAAAAGGGGC
CTTTAAGTTCAACTTTTGGGTTTAAAGAATTAAATTAAACCGTAGAGata
taattttttgtcaatttatttCCATTTGTGCACAAGAAAAAACTGGGTGT
GTCACTGTTGAATGTAGTTGCTAAAAAGCCTAAAGTTTGCCAGCTGGCTT
TGCCTTTCTTGAGACTAAGTTAAAATCAGGTTGGAATGATACAGGGGGGG
GTTTTCTATTTCGAGATGAGAGCTATTTAgttgtgaaaaagaaaagggTA
TAAAGAAACACAAGCTTACTGAATCAAGATTTGCTTTCAAGTGCAGTTCT
TATTCCTTAAGCACACTTTCTAtgaaatttaaaggatttttaaAGTTGTG
GTAATAAGTagaagatttaaaaattttctttattttcaattttttttttt
actttgctttttattgtatttttattgCTCTTTTTTTCGTGCTCTGTTTC
TCTTTGTTTGTATTGAATAACATCTTCACGCTATTGTTTGAAATAAAAGC
CTCCATTCAATAGATTGGATTTAGTATTTAAGAGCACGGCGTGTGTCTGT
AGTTTGAATTGtatctttttttgatttcattttaagTTCTTCATGACGAT
TTTAAAGTCATACTTGATTgtgtttaattttgaaatttttactttgTGAT
TAATTTGTATGAAATCAAGTTAGAAgaatttcatttgaaatgataatttt
ttcataTATTCAAGATATCGAACCGTATCGAACTATGTAGtatgtaaagt
ttttaaatgtttttttttagtcAAGAGACGAAGGGACTGGTTGCGCTAGG
CGCATCCCAGGTTTAGCTTAAATTCCGATAtgatttgcataaaaaattgA
TTGCCAAATTAAAATCGAGATATAATGTTGAAGGTCCGAATTCTttcaaa
tgatttttcaaacatGCCTCCTTAGGCATCACGTTGTGTGAGAGTGTAAT
TTGATTGTGAGCCACTGTCTCGAACGGTAGGAGAattaagccatctttta
tccCTGGTGTCTGAGAGATGAATAGAACACGCAGAGAGACTTTGCAACTG
TATTTTGTAGTGTAGTGTAAGGAATGAAATTAATTTCAGCAAGTGAGGTA
TTTAGCTCAGTATGTGTTGTTGGACTAAATATAGTTTGAATTAAAGAACA
AAAGGGCGAAATGCATCCATGTTAGTGATTAATGAAGAAATTGTTAAATT
AAGACTGTGAATTATTCAATATTAAATTCAATTTCACCAAGATATACTTT
CCTACCCTGAGTATTAGAAGCTTAGaagttaagttttcaaagaatatatt
aacctctgaagtccaataatgacattttttagttgtgttttcaacgacgg
gaaaaaatcaactttgaacctcatccaagatcttggatggtcgtcatggt
tacttttctctgtgttgattgcgcgctgaatagaatctcgattggtcggc
acaggccAATATATGATATttgcctgtgcttttcacgatAATACTTTCCA
ACATTTAGACAGACGTTTGTGTTTTAATGAAATAGCATGGTGAAATTATA
CCTGAAAATTTCTTTAACATCCAAACTTAATactttaaaatttctaaatt
gaaCCATTACTCAAAGAACCTATTGATGAAACTTTTCATTACATATGATT
CCCTTTTCAGAAGAAATTATAAAATTCAACACACATCTCACACCATCATC
ATTATCACCAACAAAAGCATCACCAATGAGAATTATGATGCATAATCAAC
CGTGTCATCAATTTTACAGTGTAGATGGTATCTTATCCGCAATGTCCCCT
TCACACCAGCAACGGCACTGTGAGCAATCGGTAGTATCGGGCGGCGGTGG
ACAGCCAATGCCACCACCttcacattcaccagcaccatacTGGCATGCTG
GGAGTCATTATGGTAAGATATTGTTTACGTTTTAACtatacacacccctg
tctcacagcccctgtggagcttttttcttcagtggggatagCAATTCCTA
TTCAACCAAACGGGGACAGAGGATagaaatagacgatatcggcttaacga
aattctccccgaatgattacccatgatgcattgcgcaaaaaaattcagta
agtcaatattgtccgtgaattttttttgcgcaatgcatcatgggtaatca
ttcggggagaattcggaaagccgatatcgtctattatattgttccaaggt
taaaaaatcaagttgggATGATTTTGTagtacaattttcaaacattgaat
tttgaatggatatgaaatcaaagtcaatttctcagtgaagctgaaattca
agggtattttccaaCTGGGGACGAAtttttcgccaaattaaattttccag
tggggcttgggtcccagcgggtctgcgAAACAGGGGTGTTTATAGTCTTT
AATGGTTTACATCTTTAAGGGTTTAATTGTAATAACTATAAAATTGCTAG
TAAAATTTTGAACTTGATCTTTTTCGAATGAGATCGAAGTTGATCGCTTT
CACTACTTACTCGACAGAGAACGAGGCCCTTACAGTATTTTAACATGATG
GTCATACTTGGCAAAGTTATCAGGGTTTCTTTCATGAGTAGTCACGGTAA
accttgaaaatcaaattagtcAAGTTTAATTTTTGCTAattaaaaagggt
tgaaaagaTCATTACGAGTGGATATTTTAGatacaaacaaataaaaactt
ttaagaCTGCTTTAGAATAATTCAATATGAAGTATTTTTTTACAATCTTC
AATAATGTCTTCTTGGCTTATATGCGAGGagtaatgtttttcaaaaaaaa
tgattcCGTTGAAAAAGTAACAGTATATAAGCCTGCCCCAAAGAATGTTT
ATTCAATGTAACAATGTAATCAGTGACTTGATGAAAAAAAACTATAATTT
AATTTCAGTTGAATATAACTTTTCATGgtttcgaaattttgaattaataC
TCGTTGGAAGGATAATCGCGTGCTAAATATTCTAGAATAAAAATGCTGAA
GCAGAACTAAGTTTTGAAAGCTATCTAATCATTACGTGAGTTAAAATGAG
TTATGGATAAAATTTATAACTTATTGACCAGGAAATGAACCGACTTTTGC
TGATTTACTGTTTATAAAAGGTATAAAGGTTTGATGGCGAACTGTATCCG
TACTAATGTAATTTTCtaccaaattttaaaattaaaaggcaatattaaaa
tttgatatataaTTCTATGATTTTTGTTCTGTAGTTTAAAAGTTATAATG
ATTTGAAAGTCGAAAAAGGAAgccattttttagtatttttccacactgaa
agttttttgagatactaatgttttcaaatccaatgttttcttattttttg
ccattttatCTTCGTCAACTCAAATCAGCTTGGATCATAAATTAAGTAAC
GTAAAAGTAGTGAGAACACAAATTTTTCTGTGAAGGATTGCGATATTTTG
ATACCATTTTTAACGTATGCTTggactttttttaaagttaacTTCGAatt
cttataacttttgaacaactgatccaaattcaaaaagttataaaccaaat
tttaagtttgtgTTTCATATAATCACGGTTCTTATTTAGGTCTGGCGAAC
GGCGAATTTCGCCGGTCAAACACGAAGTCCAAAAATTTAGTTTGCCGCAT
CATTAACATTTATGCTAATCAATACACTTggcttgctaagaattcgccgG
CCTAGAATTTAGATCTCGCTGGAgctaatttttcattcgccacCCTATTA
AAAACAAAGCAAAGCCCCTGTAAAATTATGAATACGGCTGGCAATTGAAC
CCGTAAACTATCGCGGACCGCTCGGTAGAATATCTCAATTACGATTAGCC
TTCAGCAATGAAACGCATTAACGTAATCTCGATGAATTAGATTACCCCAA
TATTATTTGAGACGCGCCTTGACAGGCATTGATGTTAGCGTTTTTACAAG
GAATTACTTTTTCATCTAGAATTTGAGCTTGTTGGATATACAGACTAATA
CactatttataaacaaaaaatgctgATAATGCTcttcgaagttttttttg
aggCATGAGCATAAGGCTTGAGAATGACGAACTCATACTGTGCCTAGTGG
CGCCGCCTCGCCAATGACGTCAGAATCTCATTTTCAATATACTGAAAGAA
TGTTGTAAAAGAAAAGTTTGTCATCGCATGTCTTTATATCCAGTGAACTT
GTTGTTGATGAATAAGTTGTTCTCATGTGACGCGATTAAACTACGAGACG
ATAATTGGTTCAGCTCGAATCTTTAAACCAGATTAGGTTGGTTGACCGCA
CATTTTCGTCAAGTCAATTTCAGTAATTTCAAAAACCTTGCCCCCAGATT
TGTCATTATTAGTTAGTAACATTTTATATTGCATtccttatttaaaaatt
tttgtttcgttattaattttcttttgtgCTTTTGTGTGAACGATGACAAT
AAAAATCAGGGACATTGACACATacttaaaaatctttctttattgaaaag
atacaGTAATGGAATTGGCTATAAAGAGAGTCGAATACAAATTTAAACAG
TTTAAATATTTCAAGACAAGGAACACAGCTCTCTAATTTTCGTACAATCA
CGTAGCTtacaacaatttttttaattggtaAATCGAATCAAGTTGTTAAA
AAAGTGCCTGTTAAATTAGAAGACGGAAGAAAATCCTTAATTGAAGGCAA
TCAAATTTAGAGGTTTAAAATTTATACGAAACACACGTTGATTAATTGGC
AGCAAAGGACAAAAAATGGAATATATAAATTATACAGCAGAGCATCTTTG
GCCGCCACAATATTATTTAGGTAATAGATATTGACAAGTTTCAGAGTTTT
GTCATTTGCTGGTTAATGACATAGATCCGATGTTGAGATAAGATCCTTTA
TAAGGAATAGAGCGACAATATGTCTTATGTATTTTTGCGGTAGCGCGCTT
TGCAATGTTATCAGGTGAAAAATACGTATACACACATTCTTAATGACAGA
TATGATGTTGTACAGTGACCTTTTTTGATAGTAACGAAATTCGTAAAAAA
AGGGAACCGAGACGGGAGGGTGAGATAAACATCTCTGTGAACTGGTATTT
GCGGTAGAAATGTTCTCAGCAAGACTGAGTCAATATTTGGTGATTTACCG
GTCACGTTTCTCACGTTTTGCACAGATCCTTTTTTAACGCCGCGATTTAA
CGTTAGAAATACGTCATATTGACATTTCATAACCAACAAGATAATTTCGG
GAAAGTTATCAAATTAGCCCGAAATTCTATTTTGACAATCGAAGTCTTAA
CATTCTGTTCTAGTTCTGTCGGATTTTTTTATTGATACCAAAGTCTATTT
ACAAAAGATTCAATTTTCCAGGAGCAGAACACAGCGCAATAACCCATGGC
TATCCTCCACCATACGCACGCCGAGGTCATCGAAGGAATCGAACCACATT
CACACGACAACAACTCGAAGAACTCGAAAAATTATTCGATAGCACGCATT
ATCCCGATGTTTTCGCGAGAGAAGAGTTAGCATCAAGGATCAGTTTAACA
GAGGCTAGAGTACAGGTAAGTTCTCATTtttaacctttaaaaaaatgcag
TGCTCAAAACTAGCTTTTATTCTTTGAACGAAATTcataaaataaatttg
acaagattcttaaaatgtttctttagCAAAATTGAATACTGAATATTGAC
CAAGCAAATATCCTTAAGTATCTAAAGGCAAGCAAGTCTGCTTAAACATC
TTTTGAAGACGGTTTGAATCTCCTTATAACTTTACTCATAGTTTACCGGT
CATAATTGAATACCCACCTAATATTCccgcaattttcatattctgTTGCG
CTCGATTCTTCCTGTTCTTAACAATCTTGTTGTTCCCAAAAAAGGGAAAT
GAGTTTTTCTCGTTAGTACGACGTTAGTACGAAATTTTTGCATGACAAAG
AAGGGTATTTTATAAGTAAAAACGATTCATAGAATAACTGAACGCATTCG
AATAACAATCGAAATACTCAAATATTAGCTATAATTTTTTCCTTCGtcta
ttttttcactttttatgtGTCCTTGTTTTTCCATAGGTATGGTTCCAAAA
TCGTCGTGCAAAGTTTCGTAAAACAAGCGAGAAAAACAAACGGAAATCGA
ATTCTACGTCATCATCTtcatcaaccaatcaaaatacagATCTTTCATCA
ACAGCCAATCAAATGGCAACTACAAACAATAACAACAATAGTACtataaa
taataacaataatggtgAAACAGTGATCGATAAACAATCGAATGAAGTCG
ATGAACAAATTCGATTGAAAAACGATTCAATCGAATCAACAGAAAAACAA
ATTCTCGATCATAACACACGATTACCTGAAGACATAAACAATAAATATAA
CTCGACTGCTCCCCGGCTGACACACCCACCGTACACCTTTCATACTTATC
AAGGCACGTACTGTCCTTCATCATATGGCTCTATGGAGCCGCGCGTCGTA
AATGGAGTCTCATACCCTGTATCTGTTGAAGGTGTCAAGGGTGAAAGCTA
TGGCCGTAACACTCTAGTAAATAATGGTGATTTAGACTGGCGGGCTTAGG
AGCTACTAAAAATGCTTATATTTCTAGTTTTTTTGCTATGTAAAtatctt
aaaaagaaaattttatgaagaCGTGATATAACATAGAAAGCATTATTTCC
TATTTATATCTTTATTAtggtttttgaaaactttaatcGACACTTTAAAT
TGTTGAGGGTGTACCGtaaaattttgtatattttagATGTATGTTTTAGA
GGGATCATTTTTATCGGTTTTTATTATATTCCAAGTTAtctttttaccaa
aaatataTACTATTTGATTTTTAGAACGTGTTGAGtaaaatttttatatg
attGATTAATAATTTCTTGATATTCATAATGTAATCTTTAATTGACAAAT
CGTTTCAAAATATA Coding sequence (CDS) from alignment at sc0000012:939944..947157+ >TCONS_00001849 ID=TCONS_00001849|Name=TCONS_00001849|organism=Clytia hemisphaerica|type=CDS|length=2682bp|location=Sequence derived from alignment at sc0000012:939944..947157+ (Clytia hemisphaerica)
ATGAGAATTATGATGCATAATCAACCGTGTCATCAATTTTACAGTGTAGA
TGGTATCTTATCCGCAATGTCCCCTTCACACCAGCAACGGCACTGTGAGC
AATCGGTAGTATCGGGCGGCGGTGGACAGCCAATGCCACCACCttcacat
tcaccagcaccatacTGGCATGCTGGGAGTCATTATGGAGCAGAACACAG
CGCAATAACCCATGGCTATCCTCCACCATACGCACGCCGAGGTCATCGAA
GGAATCGAACCACATTCACACGACAACAACTCGAAGAACTCGAAAAATTA
TTCGATAGCACGCATTATCCCGATGTTTTCGCGAGAGAAGAGTTAGCATC
AAGGATCAGTTTAACAGAGGCTAGAGTACAGGTATGGTTCCAAAATCGTC
GTGCAAAGTTTCGTAAAACAAGCGAGAAAAACAAACGGAAATCGAATTCT
ACGTCATCATCTtcatcaaccaatcaaaatacagATCTTTCATCAACAGC
CAATCAAATGGCAACTACAAACAATAACAACAATAGTACtataaataata
acaataatggtgAAACAGTGATCGATAAACAATCGAATGAAGTCGATGAA
CAAATTCGATTGAAAAACGATTCAATCGAATCAACAGAAAAACAAATTCT
CGATCATAACACACGATTACCTGAAGACATAAACAATAAATATAACTCGA
CTGCTCCCCGGCTGACACACCCACCGTACACCTTTCATACTTATCAAGGC
ACGTACTGTCCTTCATCATATGGCTCTATGGAGCCGCGCGTCGTAAATGG
AGTCTCATACCCTGTATCTGTTGAAGGTGTCAAGGGTGAAAGCTATGGCC
GTAACACTCTAGTAAATAATGGTGATTTAGACTGGCGGGCTTAGATGAGA
ATTATGATGCATAATCAACCGTGTCATCAATTTTACAGTGTAGATGGTAT
CTTATCCGCAATGTCCCCTTCACACCAGCAACGGCACTGTGAGCAATCGG
TAGTATCGGGCGGCGGTGGACAGCCAATGCCACCACCttcacattcacca
gcaccatacTGGCATGCTGGGAGTCATTATGGAGCAGAACACAGCGCAAT
AACCCATGGCTATCCTCCACCATACGCACGCCGAGGTCATCGAAGGAATC
GAACCACATTCACACGACAACAACTCGAAGAACTCGAAAAATTATTCGAT
AGCACGCATTATCCCGATGTTTTCGCGAGAGAAGAGTTAGCATCAAGGAT
CAGTTTAACAGAGGCTAGAGTACAGGTATGGTTCCAAAATCGTCGTGCAA
AGTTTCGTAAAACAAGCGAGAAAAACAAACGGAAATCGAATTCTACGTCA
TCATCTtcatcaaccaatcaaaatacagATCTTTCATCAACAGCCAATCA
AATGGCAACTACAAACAATAACAACAATAGTACtataaataataacaata
atggtgAAACAGTGATCGATAAACAATCGAATGAAGTCGATGAACAAATT
CGATTGAAAAACGATTCAATCGAATCAACAGAAAAACAAATTCTCGATCA
TAACACACGATTACCTGAAGACATAAACAATAAATATAACTCGACTGCTC
CCCGGCTGACACACCCACCGTACACCTTTCATACTTATCAAGGCACGTAC
TGTCCTTCATCATATGGCTCTATGGAGCCGCGCGTCGTAAATGGAGTCTC
ATACCCTGTATCTGTTGAAGGTGTCAAGGGTGAAAGCTATGGCCGTAACA
CTCTAGTAAATAATGGTGATTTAGACTGGCGGGCTTAGATGAGAATTATG
ATGCATAATCAACCGTGTCATCAATTTTACAGTGTAGATGGTATCTTATC
CGCAATGTCCCCTTCACACCAGCAACGGCACTGTGAGCAATCGGTAGTAT
CGGGCGGCGGTGGACAGCCAATGCCACCACCttcacattcaccagcacca
tacTGGCATGCTGGGAGTCATTATGGAGCAGAACACAGCGCAATAACCCA
TGGCTATCCTCCACCATACGCACGCCGAGGTCATCGAAGGAATCGAACCA
CATTCACACGACAACAACTCGAAGAACTCGAAAAATTATTCGATAGCACG
CATTATCCCGATGTTTTCGCGAGAGAAGAGTTAGCATCAAGGATCAGTTT
AACAGAGGCTAGAGTACAGGTATGGTTCCAAAATCGTCGTGCAAAGTTTC
GTAAAACAAGCGAGAAAAACAAACGGAAATCGAATTCTACGTCATCATCT
tcatcaaccaatcaaaatacagATCTTTCATCAACAGCCAATCAAATGGC
AACTACAAACAATAACAACAATAGTACtataaataataacaataatggtg
AAACAGTGATCGATAAACAATCGAATGAAGTCGATGAACAAATTCGATTG
AAAAACGATTCAATCGAATCAACAGAAAAACAAATTCTCGATCATAACAC
ACGATTACCTGAAGACATAAACAATAAATATAACTCGACTGCTCCCCGGC
TGACACACCCACCGTACACCTTTCATACTTATCAAGGCACGTACTGTCCT
TCATCATATGGCTCTATGGAGCCGCGCGTCGTAAATGGAGTCTCATACCC
TGTATCTGTTGAAGGTGTCAAGGGTGAAAGCTATGGCCGTAACACTCTAG
TAAATAATGGTGATTTAGACTGGCGGGCTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001849-exon-sc0000012-1491911889:939944..940055 | TCONS_00001849-exon-sc0000012-1491911889:939944..940055 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1510915933:939944..940055 | TCONS_00001849-exon-sc0000012-1510915933:939944..940055 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1575043694:939944..940055 | TCONS_00001849-exon-sc0000012-1575043694:939944..940055 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1491911889:941854..942105 | TCONS_00001849-exon-sc0000012-1491911889:941854..942105 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1510915933:941854..942105 | TCONS_00001849-exon-sc0000012-1510915933:941854..942105 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1575043694:941854..942105 | TCONS_00001849-exon-sc0000012-1575043694:941854..942105 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1491911889:945565..945758 | TCONS_00001849-exon-sc0000012-1491911889:945565..945758 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1510915933:945565..945758 | TCONS_00001849-exon-sc0000012-1510915933:945565..945758 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1575043694:945565..945758 | TCONS_00001849-exon-sc0000012-1575043694:945565..945758 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1491911889:946280..947157 | TCONS_00001849-exon-sc0000012-1491911889:946280..947157 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1510915933:946280..947157 | TCONS_00001849-exon-sc0000012-1510915933:946280..947157 | Clytia hemisphaerica | exon |
| TCONS_00001849-exon-sc0000012-1575043694:946280..947157 | TCONS_00001849-exon-sc0000012-1575043694:946280..947157 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:939944..947157 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0043565 | sequence-specific DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0043565 |
sequence-specific DNA binding |
Blast
BLAST of TCONS_00001849 vs. Swiss-Prot (Human)
Match: DRGX (Dorsal root ganglia homeobox protein OS=Homo sapiens GN=DRGX PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.907e-24 Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 1
Query: 406 YARRGHRRNRTTFTRQQLEELEKLFDSTHYPDVFAREELASRISLTEARVQVWFQNRRAKFR 591
+ RR RRNRTTFT QQLE LE +F THYPDVF REELA +I+LTEARVQVWFQNRRAK+R
Sbjct: 28 FLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWR 89
The following BLAST results are available for this feature:
|
