TCONS_00001839 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001839
Unique NameTCONS_00001839
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4926

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001839 ID=TCONS_00001839|Name=TCONS_00001839|organism=Clytia hemisphaerica|type=transcript|length=4926bp
CTGAGAAAATAATCTGGAAGCTACCAagcccctccaaaatcgaattAAAG
TGGAAATGCTGAAAATGCCATTCTTGCCCAAACTCTAAATTTATTTTAGA
TTAGATCCAGAGCAAATTGCCTATATAATTTTACAGTAAAAGGCTTCAAA
ATACAATATTTCCAAGCTTAAGACCGAGCTGTAGAATGGATATTTGTCCG
ATCTACAGAAGAATAGTTTGCCGTGGGTTCTAATGATGTGAACAAAGCAA
ACAAAAGAAACTTAAAACAATAAACAATGATACTCTTGTTTCTTTAAGCT
TGGTTGGGCACAATaacattctttatttttcacagAAATAGTTCGTTCAC
GTTATGTTAATTGAAACAGAGACAAAACAATGTTGAACTGTGCTTTTGAT
TACTTTCTAATTAGACATAATTAACTAGACGAAGAAGTGAAAATTAAAGT
TTGTACAAACAAATTATTGCTTACTGGCAAATGAACCAAACACCTGTCAC
GAGCATGCCTAAAGTGTGCTAAATATTATGCAGAAAGAACAATTAACGAG
TATTTTCTTCATGAATAATTAATGAAGTAAAATTACCAAGGCGTATCTTT
TGTtcagtaaactttttttttcatcggAGAAGaccaattcaaattttatt
atttgatacttgagaaaaattttagcgattaaaattttttctcaatgtgT
CGGTaatattataaaatatttttgaaaataatattaggaaggaagaatat
ttttaataaaTCATGTTGCCGGTCAAAGGCAATTTACTTGTGTtatcact
tgtggttttttgTGTGGCTGTTAATGGCTTACCATTTAATGCTAAATATA
GATTTGCTAGAGACACTGCAGAAGAATTAATCCCTGAAGAAGAGGGAAGT
GGAAGTGGTAATTTATATGAACGTGATGCTATTGCTCAGAATGCTAGTGT
ATTAGCTGCTCCAGTACCAGGAGGTCATGCTAATGCTACCAAAGAAGGAG
CTAAAGACTCTAAAGCTGCATCTGAGAAAGCTGAAGCTAAGGAAGAACCA
AAAGAGAAAGCTACTAAAGAGCAAAGTAAATCTTTCGATGATGGGCAATC
GTTGACCAGCAGTGAATTCGCCAATAAACCAGCTGCTGATAATAAGGATG
TTAAAGAAGCACCTAAAGTTGAAGAGAAGAAAGCTCAAAGTAAGAGTGAT
ATCAATGAGAATCAAGCTGAGGATGAGGTGTCAGAACAACAAGAATCACC
AGCTGAGGAAACTTCTGAAGAACAACCCGCTCAAGAAGGTGAAAGTGAAG
AGGAACCAAGTGAAGAAGACGGAGGAAATGAGGAACAACAAGATAATGAA
GAAAACCAAGAAGATTCTAACGAAGAAGATAGTGGTAACaatgaagaaga
gaagaagAAAGATCAAGTTGCATCAAAcctcaaaatgttcttcatTTCAC
CATACCAAAAGAACGGTGAAGAAGATCCATCTACCAGACAAATCTTGACT
TACCCAGCTAAATCACAAGGATGGGGAAACACTCATCAGTTCGGACCATC
TCACATTTGGAACAGTGATTACCCATATTTTGCATATGGATACAGTTGGG
GCTGTGGACACCACGGCTATGGAGGTATCGGTCACGCTAAGAAATCTGGA
GTTGCCAAAGAAGAAGATGCTCAATGCCGTGATTACGTTTTGATTCCTGC
TGCCCCACAAGCATCAGCTGTGTTGTCACCTGCTGAAAATGGAGTTGCAC
GAAATTTTGTCAACAAAGATATCGCATGCAACGACGGAGATACGGAATGC
ACACAACGTCAAGTCATCGGTAGCATGGCAGGTGGATCTATGTTTGGTGA
TGGAATGGGTGGTTTAGGTCTTGGATTCCCAGGTGTTCCAGGACTCCACA
CTGGTATCAGTGGTTACAATATGGCTGGTGGTTTCGGTGACCATATGGGA
AACGGACATGGCGGTCACCATGGAGGTCATCGTGGTGCACATGGAGGAGG
TGCTGGTGGTGGATACGCTGGTGGTTATGGTGCTCATTTCTTCAAAGCTG
AAGAGCATGGAATCCCAAGCTACTGGAACGCACGTGCTGATATTCCAAAA
GGAGACGTCAAAGGATTCTTCGGTGGACGTGGAGCTGCCTTCTTCCACGG
TGAAGACATTTTACCTATCCATGAAGCAGCTAACGGCATTGGATCAGGAA
GCAGCTATGGCGTCGGTAGTGCACAATACTGGGACAAAACACCAAACTTT
GGTGCCATTCATTCCGGATTCTTCGGTGGACGTGGTGGATTTGGAGGATA
CGGTGGAGTCGGTTATGGAGGACGTGGTGGTTTCGGAGGATATGGTGGAC
GCGGTTATGGATTAGGAGGACTCGGTGCCAACTGTGGAGGTACTGGATGT
GGTGGTCTCGGCTTGGGAGGTCTTGGTGGTGGTCTCGGCATGGGAGGCCT
TGGTGGTGGTTGTGCTGGTGCTGGCTGTGGTGTCGGTGTTGCACATGCTG
GTCTTGGTGCTGGATGCATCGGCGATGGTTGCGGTGCTGGTATTGGGCAC
GCAGGAGCTGGCTGTGTCGGAGATGCTTGCGGTCTTGGAGATGGCTGTGT
TGGTGACGGTTGCGGTGCCGGACTTGGTGCAGGACTTGGTGCTGGACTTG
GTGCTGGACTTGGTGCTGGATGCGTCGGAGACGGCTGTGGTGCTGGATTA
GGACATGGCTGTATCGGAGACGGATGTGTTGGTGAATTAGGACACGGTGG
TAACTGCATTGGAGATGGATGCGGTGATGGATGTCTCGGAGATGGATGCA
ATGGAGGACACACTGCTATCCTTAGTGATGGTTGCGGCGGTGACGGTTGT
GGTGGTGGATGGTCCATCGGTGGTCACCATGGACATGGTCTCGTTGCTAA
ATCCAAAACAAAACcaagcaaaaaatcaaagaCAACCAAGAAATCCAAAA
CAGCTAAAGCAACCACACGACAAGACATTGCCATGCCTGACGAACAAGCT
ATGATGGATGTCACTAAACAACGTCAATTGATTGGATCCTTGGGAGCAAG
CACCTTGTTTGCTGATAATGTCGGTGGTATGGGATTAGGACATCCAGGTG
TCCCACAAATGTCATCAGGTGTCGCTGGAATCCCAGGAGAATACGGAGGT
TCTGGTGGATATTCTCATGGATGGGACGGGGAAGGTCCAGGATCTCACCC
ACACGGATACAATAACTACGCTTACTCTGGTGGCAATCACGATTACCGAT
CAGAAACACCAACTCCTGAAGAACCAGCACCAGCTAACACCGATGAAAAT
GcTGAGAAGAGAGCTATCATCTACCCAAATGCTGAAATTGATAACGGATA
CTCCCACAACGCTGTTCAATACGCCAACGGTGGATTCCCTGGTCGTGCAA
CCACCCAATACACCTCAGTCCACCATCAGTCAATCTCACATGACGATGGA
GATGCTGATGGCTACGTTGATGGAGGCGCAGGATACGTAGGTGGCGCCGC
CGCTGCCGTCCCTGCTGTCAGTGCCGGATACGTCACCGGAGGTGCTGTCC
CAGCTGCTGGCTACCTCGGAGGAGCCAGTGTTGTTGGTAGTAGATATGCA
GGATCAGGATATTTGGCACGCTCTTACCACCCACGACATGTCCATGTTGG
TGTCGGTACCCCAGGTGTCAAAGTCGAGGTTGAAACTGCCAAATCTGTCA
TCACCTCAAAACCAGTTCATGTCACTGGACAGAAAATGAGTGAAATCAAG
AACATCGTCAAGGATGTTACAGCTTCATTGGCTAAAACCAGCAAGAAATT
GAAGTCCTTGAAAACTGGTGCCAAACGTCAAATCACACCAGCTTTTACTC
CAGTCGTTTCTGAGCCAGTCGGTGTCCCATCAAACAGATACCCAGTCCCA
GCTGCCGACAGATACCCATTAGGAGCTGGATACATCTGGCCATCAGCTAA
CTACGGCCATCAATACGGAGGTCCATACTCATGGAGCAAATCTCACACAC
CAAAAGCTGCCCCAGCTGTTGCTGCAAAACCAAGCACTGCCAAAACAAGC
AAGAAAAGCAATACCAAGAAAAGCAACATCGAACAAGCATCAGAagagca
acaacaacaacaatatgCACCAAGCAGCCGTTCAATGATGCCAGATCCTA
TGTACAGCAACGAACAAGAACAATATGCACCAGAGAGCCAGTACGAGATG
CAACAACGTATGCAACCTGAATATATGTCAGCCAAAAAATCATCCGTACC
AAAGAAAGCTAACCACTAAAGGAGAGAAAGAGCATTCAAGGATGGCTTTA
CAATCGCCAATATTGATGACTGGGTATTGAAGAACCAACCCAAATATTGA
ATTTTCCTGCCGTAAAGATCCTCGGATGGGAGAAATGATCGTACATACAC
TGCTTCGCTACCATATTGCTTCAAAATAGATCAAATATGTGTCCATTatt
attcatttaaaaaatttgtgttttattttatttgttacTAACCATGTCAT
ACTATATAGGAGccttgtaaattttttaaaaattatatgtGTTCGGCTCA
GGTTATACTTTATTTAGGGTCGatcatgttgttgttttttctgttaGAAA
GCTAATAGGCATAATGCCAGGGAAAGTAAaagatcaatgttttttttgct
caagcCTTACATTTTGTCTTtagtttttatttgaattttttgtttttgtc
tgtTTGTTTCAACGATCTTTAAGCAATTTGGAAGCACTGTGAAGTTGAAA
GTTAGAAAAAAGTGTAACTCTTAGATAATTATATACATATATTTTTGTCC
TCGCATTTATTTAATTGTCTAATTAATTTGTTAGAGTATTTATTGCAAAA
TATGAATATAGTTTTTTACAAATAATcgaaaaagttgatatttgaATTCA
TGTCGTTCTCCCAAAAACAACTGGAT
Run BLAST on NCBI

transcript from alignment at sc0000012:824437..833166+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001839 ID=TCONS_00001839|Name=TCONS_00001839|organism=Clytia hemisphaerica|type=transcript|length=8730bp|location=Sequence derived from alignment at sc0000012:824437..833166+ (Clytia hemisphaerica)
CTGAGAAAATAATCTGGAAGCTACCAagcccctccaaaatcgaattAAAG TGGAAATGCTGAAAATGCCATTCTTGCCCAAACTCTAAATTTATTTTAGA TTAGATCCAGAGCAAATTGCCTATATAATTTTACAGTAAAAGGCTTCAAA ATACAATATTTCCAAGCTTAAGACCGAGCTGTAGAATGGATATTTGTCCG ATCTACAGAAGAATAGTTTGCCGTGGGTTCTAATGATGTGAACAAAGCAA ACAAAAGAAACTTAAAACAATAAACAATGATACTCTTGTTTCTTTAAGCT TGGTTGGGCACAATaacattctttatttttcacagAAATAGTTCGTTCAC GTTATGTTAATTGAAACAGAGACAAAACAATGTTGAACTGTGCTTTTGAT TACTTTCTAATTAGACATAATTAACTAGACGAAGAAGTGAAAATTAAAGT TTGTACAAACAAATTATTGCTTACTGGCAAATGAACCAAACACCTGTCAC GAGCATGCCTAAAGTGTGCTAAATATTATGCAGAAAGAACAATTAACGAG TATTTTCTTCATGAATAATTAATGAAGTAAAATTACCAAGGCGTATCTTT TGTtcagtaaactttttttttcatcggAGAAGaccaattcaaattttatt atttgatacttgagaaaaattttagcgattaaaattttttctcaatgtgT CGGTaatattataaaatatttttgaaaataatattaggaaggaagaatat ttttaataaaTCATGTTGCCGGTCAAAGGCAATTTACTTGTGTtatcact tgtggttttttgTGTGGCTGTTAATGGCTTACCATTTAATGCTAAATATA GATTTGCTAGAGACACTGCAGAAGAATTAATCCCTGAAGAAGAGGGAAGT GGAAGTGGTAATTTATATGAACGTGATGCTATTGCTCAGAATGCTAGTGT ATTAGCTGCTCCAGTACCAGGAGGTCATGCTAATGCTACCAAAGAAGGAG CTAAAGACTCTAAAGCTGCATCTGAGAAAGCTGAAGCTAAGGAAGAACCA AAAGAGAAAGCTACTAAAGAGCAAAGTAAATCTTTCGATGATGGGCAATC GTTGACCAGCAGTGAATTCGCCAATAAACCAGCTGCTGATAATAAGGATG TTAAAGAAGCACCTAAAGTTGAAGAGAAGAAAGCTCAAAGTAAGAGTGAT ATCAATGAGAATCAAGCTGAGGATGAGGTGTCAGAACAACAAGAATCACC AGCTGAGGAAACTTCTGAAGAACAACCCGCTCAAGAAGGTGAAAGTGAAG AGGAACCAAGTGAAGAAGACGGAGGAAATGAGGAACAACAAGATAATGAA GAAAACCAAGAAGATTCTAACGAAGAAGATAGTGGTAACaatgaagaaga gaagaagAAAGATCAAGTTGCATCAAAcctcaaaatgttcttcatTTCAC CATACCAAAAGAACGGTGAAGAAGATCCATCTACCAGACAAATCTTGACT TACCCAGCTAAATCACAAGGATGGGGAAACACTCATCAGTTCGGACCATC TCACATTTGGAACAGTGATTACCCATATTTTGCATATGGATACAGTTGGG GCTGTGGACACCACGGCTATGGAGGTATCGGTCACGCTAAGAAATCTGGA GTTGCCAAAGAAGAAGATGCTCAATGCCGTGATTACGTTTTGATTCCTGC TGCCCCACAAGCATCAGCTGTGTTGTCACCTGCTGAAAATGGAGTTGCAC GAAATTTTGTCAACAAAGATATCGCATGCAACGACGGAGATACGGAATGC ACACAACGTCAAGTCATCGGTAGCATGGCAGGTGGATCTATGTTTGGTGA TGGAATGGGTGGTTTAGGTCTTGGATTCCCAGGTGTTCCAGGACTCCACA CTGGTATCAGTGGTTACAATATGGCTGGTGGTTTCGGTGACCATATGGGA AACGGACATGGCGGTCACCATGGAGGTCATCGTGGTGCACATGGAGGAGG TGCTGGTGGTGGATACGCTGGTGGTTATGGTGCTCATTTCTTCAAAGCTG AAGAGCATGGAATCCCAAGCTACTGGAACGCACGTGCTGATATTCCAAAA GGAGACGTCAAAGGATTCTTCGGTGGACGTGGAGCTGCCTTCTTCCACGG TGAAGACATTTTACCTATCCATGAAGCAGCTAACGGCATTGGATCAGGAA GCAGCTATGGCGTCGGTAGTGCACAATACTGGGACAAAACACCAAACTTT GGTGCCATTCATTCCGGATTCTTCGGTGGACGTGGTGGATTTGGAGGATA CGGTGGAGTCGGTTATGGAGGACGTGGTGGTTTCGGAGGATATGGTGGAC GCGGTTATGGATTAGGAGGACTCGGTGCCAACTGTGGAGGTACTGGATGT GGTGGTCTCGGCTTGGGAGGTCTTGGTGGTGGTCTCGGCATGGGAGGCCT TGGTGGTGGTTGTGCTGGTGCTGGCTGTGGTGTCGGTGTTGCACATGCTG GTCTTGGTGCTGGATGCATCGGCGATGGTTGCGGTGCTGGTATTGGGCAC GCAGGAGCTGGCTGTGTCGGAGATGCTTGCGGTCTTGGAGATGGCTGTGT TGGTGACGGTTGCGGTGCCGAACTTGGTGCCAGACTTGGTGCCGGACTTG GTGCTGGATGTGTTGGAGACGGTTGCGGTGCTGGATTAGGTGCTGGTTGT GTTGGTGCAGGTTGCGGTGCCGGACTTGGTGCAGGACTTGGTGCTGGACT TGGTGCTGGACTTGGTGCTGGATGCGTCGGAGACGGCTGTGGTGCTGGAT TAGGACATGGCTGTATCGGAGACGGATGTGTTGGTGAATTAGGACACGGT GGTAACTGCATTGGAGATGGATGCGGTGATGGATGTCTCGGAGATGGATG CAATGGAGGACACACTGCTATCCTTAGTGATGGTTGCGGCGGTGACGGTT GTGGTGGTGGATGGTCCATCGGTGGTCACCATGGACATGGTCTCGTTGCT AAATCCAAAACAAAACcaagcaaaaaatcaaagaCAACCAAGAAATCCAA AACAGCTAAAGCAACCACACGACAAGACATTGCCATGCCTGACGAACAAG CTATGATGGATGTCACTAAACAACGTCAATTGATTGGATCCTTGGGAGCA AGCACCTTGTTTGCTGATAATGTCGGTGGTATGGGATTAGGACATCCAGG TGTCCCACAAATGTCATCAGGTGTCGCTGGAATCCCAGGAGAATACGGAG GTTCTGGTGGATATTCTCATGGATGGGACGGGGAAGGTCCAGGATCTCAC CCACACGGATACAATAACTACGCTTACTCTGGTGGCAATCACGATTACCG ATCAGAAACACCAACTCCTGAAGAACCAGCACCAGCTAACACCGATGAAA ATGGTAAGCTCTTTTTGTAGTCTTACGTTTTcgtaacattttattttccc TTGTTTTCCTCCAGTACTTTATGCTATTACTAGCTTCTCTTATTTTTAAG CTACTGACAACCATATCTTTGTTATGAAATGGCTTAACTAATATTTAttg caaagtttttttctcatttttcagcTGAGAAGAGAGCTATCATCTACCCA AATGCTGAAATTGTAAGTattaattttgcaaaaattttcagCTTGCATCG AATACAACCatttaaacgatttttgaaAGAATAATTTTACAAGAATATTA GACTCAATTTGGCCCAAACTTAAGATCTAGTCAGAACAATATACGAGCCC CAGATTTTAGAAATTCGCcaagaaaatactttttttttatatacttttaa atacttttactttttcattattttgaagaATGCGTACATAGTTAAGATGT ATAACTACTAAGTAAAAtttattgactttgatttcgttGGAATGTGATTT TACCCTTCTGAACTTGAAGACTCCGATACTGAGGTATTTCACTACTTTCT TTAGGATAACGGATACTCCCACAACGCTGTTCAATACGCCAACGGTGGAT TCCCTGGTCGTGCAACCACCCAATACACCTCAGTCCACCATCAGTCAATC TCACATGACGATGGAGATGCTGATGGCTACGTTGATGGAGGCGCAGGATA CGTAGGTGGCGCCGCCGCTGCCGTCCCTGCTGTCAGTGCCGGATACGTCA CCGGAGGTGCTGTCCCAGCTGCTGGCTACCTCGGAGGAGCCAGTGTTGTT GGTAGTAGATATGCAGGATCAGGATATTTGGCACGCTCTTACCACCCACG ACATGTCCATGTTGGTGTCGGTACCCCAGGTGTCAAAGTCGAGGTTGAAA CTGCCAAATCTGTCATCACCTCAAAACCAGTTCATGTCACTGGACAGGTA TGGTcaaatcaaattatttcattcaccaaaaatgacgatataaaaacgtt ttaaatgAATGCGCACTTAAAGTTCAATAACTACCCCCATCACAATCAAC GTTCGATTTAGATTTATTGGAATCTGTAgcaattcttttaaaattcattt tcattttaaaattcaCAGAAAATGAGTGAAATCAAGAACATCGTCAAGGA TGTTACAGCTTCATTGGCTAAAACCAGCAAGAAATTGAAGTCCTTGAAAA CTGGTGCCAAACGTCAAATCACACCAGCTTTTACTCCAGTCGTTTCTGAG CCAGTCGGTGTCCCATCAAACAGATACCCAGTCCCAGCTGCCGACAGATA CCCATTAGGAGCTGGGTAAGCTATTTTCTCTTTTCAAGGTTATACATATC AAAGTTATGCAGACAGTCCCTGTAAAATACAGTCAATATATTTTTACCTC TACATATTTTTATGGAGAAGATAAAGGGTCAGTCGATGAAAGAGTCATAT ACTGTATCATCCTTTTTACAGATTACAATTACAggtgagtctccataact cgaacacccaCGAGTGTTTGCTCGAGTTAAgtaaatttcgagttatagag taagaTTAATAGGGCATTCTTAACTGGAGGGACGAAAAACTTGTTCGGAG GAGAAAttcaagttatagaggttcgagttaaagagattcTATTATACTGG AATTATTTTACGGGTTTTCACGGAGGGCACATGAAAATTTACTCTACTGA GAAACATTTAATTCTCTTTTGTCCTTCAGATACATCTGGCCATCAGCTAA CTACGGCCATCAATACGGAGGTCCATACTCATGGAGCAAATCTCACACAC CAAAAGCTGCCCCAGCTGTTGCTGCAAAACCAAGCACTGCCAAAACAAGC AAGAAAAGCAATACCAAGAAAAGCAGTAAGTTCACTTAAGCATGAATTTA TTTTGATGTGTTAAGCCTCGGGGATTGTACAGTCTATCCGTTGATCTCTT TTGCATTTACACTTGGCATGTATTTTTCCTTCGGGCTTGGTAAAGGAGAT TTTTATCCCTGCAGTATAGTAAATTATCTGATGAATTTTATTACGATTTT GTTGATGTTATTGTATTGTACAGGTGAAAAAGCTAAGCGTTCAGTATCTG TGAAAACACCAACGGTCGTAGTTGCCAAGAAAGGAGTCAACAAGAAAGGT TCCAAACGTCAGTTTATTCAACGTGGTTACGGAGGTCAGTTCCTTTACAA CAGCGATAAGGAATGATTTGCAAATTTCTCCCTGAAATTTTGTTACACTA CATACACACATAATAAAAACATTCACTCATACCATTTATAGGCATACAAA AACCTAGAaagtaaaatttggacaaaaaaaaacgaaaaatttgatttata aaataatgaaatttcatCAAGAATTCGCATTTCATTTCTTGGGCtatcat tttatttatttaatgtCAAAATTGATCTTTTGAGTATCATTATTtaaaca aaactttaaaaaaagattcgaAAACGAATAGCAACAAAATCAAAACGAAA AACAAATCCTGAATTCGAATTTTTTGTCCGTTCTAGGTATGCCTATATAT GGTATGGGAGGAGAAGGAGGAGAGGTCATGCCATCACCAAGGTCATTCGG ATATGGTGGTATCAGAGGTTATGGTAGTCATCATCTCATGGAAGGAGGTT TCGATGGATTCGGTGTCCCTGGAGGACATATGGGGTACGGTCATGTTGGT TATGGTCATCATGGGGGTTACCCAATGAGTGTATTGTCAAACCACGGTGA CTTTGGTGCTGGATACGCAGGTCCACTCGGTGGTAACTTTGATGCAGGAC ACCATGAATATGGAGTTGAAGGTGATATTGGTTTCGGTGGACATGGTTAT GGTGCAGGTTTAGGAGGTGCAGGGTTAGGAGGTGCAGGATTAGGAGGTGC AGGATTAGGAGGTGCCGGATTAGGTGGTCTCGGTGGACACTATGGTGGTA GATATGCTGGTCATGCCGGTATCTTTGGAGGTAGCTTCCATCATTTGGGA GGTCCTGGAATTGTTGGTGATTATGAAGGAGATCGCGGTGCATTGGTTAT GTCTGACCATGCTGGGTTTGGTGCACATGGATATGGAGGACCTGCATTAT TAGGTGGACGTGTTGGATTTGCTGGTGATCACGGTTACGGCTATGAAGGC CGCGCTGGTTTAGGATATGGCCATGGATTCGGTGGATATGGACATGGTAT TGGTTACGGACATGCTGGAGTCATGGACGGTCATTTAGGCTATGGTCATA CCAGTTTTGATGCTGGAGTACACGGTGGTCTAGGACTTGATATTGGTGCT CATGGTATTGAAGGACACAGTGGATATGGTGGTATGCACGGCTTTGTAGG TCTTCCTCATGCTGCTGGTGCTGGATTTCCAGGCTATGCTAGAGAAAGTA AGCATCCTTTAGATATAAAGCTACACAGTAAAAGCTATCAACAAAATAAG TTACACTTTAAAGTTTAGATCTTTTTTGTTAAGGACAGAGAATTTACTCA ACAAAATGTTATATTGTACCGAACGTGTAGCGAACAGTCCAACATcagaa atgtttaaaaatgttaGGACGCGTCATCCACTCGAAACCGTTGTAGAAAT AGCACTTCCTCCGCCGCGCGATATCGGTTTAGTGCCCACCCTCTCCAATA AGAGATGATATATATTCCATTATAATAGCTTTCATCAACGATAATCAAGA AATCTGCTACGAAACACTGATCTTCCGAAGCCTGTAAAATAATTCTTTCG GAATTTTAGTATTATTTTTACTGTAAAAGATATGATCTTAGGTTAAGTTA AAATCAGTAACGATATTTGAAAATTCTCTATTTTCTGCTCTGTCACtaat cttttattttcattattttctctTACCAGACATCGAACAAGCATCAGAag agcaacaacaacaacaatatgCACCAAGCAGCCGTTCAATGATGCCAGAT CCTATGTACAGCAACGAACAAGAACAATATGCACCAGTAAGTCCATTGTC TTACTTCACACAACTCTGAGTGACATCATATCTTTCATATGATCCTAGAA TCGGCGTTGCAACTTTTCCTTttgtagacgaaaatccgtccaGGGgactt ttttttagaatttctgTCTTAATTGTAAGCTTCTGACTAAGGGCCGTTTT TCCCTTTCGCTGCAAGTCCCAGTTAGGGCTGCAAATACACAAATTTGCAA GATTCATTTTTCTTAGGGTGCCATTTTTGGTAACAATTGATAAGAATTAG GAATCAGTTTCTATTAATCGGCAACCAAaagtttctaattttttattggA TACTTTTCTTTCAGGAGAGCCAGTACGAGATGCAACAACGTATGCAACCT GAATATATGTCAGCCAAAAAATCATCCGTACCAAAGAAAGCTAACCACTA AAGGAGAGAAAGGTATGGGGAGGACTCTACTTTCTATGTTTGGCAAAGTT TCTATGGCATCCACTACCTTAACATTTTTCCTTGATTGGCTTAACAAAGT CCCGCTAACCTTTCTACCTGATATTAAAAGTTTTGTAACTCAGGGAAGGT ATTCGAGCAATTTTGCGTAGAAATTTCAATTGCTTTCCACACACATCTAT TTGCTTTGTTTAAAATGTTAATCCTTATAATTAATGAAGATTGTTAAATA ATTATCATTAATTGACTTTTTACCTCGTTTCTAGAGCATTCAAGGATGGC TTTACAATCGCCAATATTGATGACTGGGTATTGAAGAACCAACCCAAATA TTGAATTTTCCTGCCGTAAAGATCCTCGGATGGGAGAAATGATCGTACAT ACACTGCTTCGCTACCATATTGCTTCAAAATAGATCAAATATGTGTCCAT TattattcatttaaaaaatttgtgttttattttatttgttacTAACCATG TCATACTATATAGGAGccttgtaaattttttaaaaattatatgtGTTCGG CTCAGGTTATACTTTATTTAGGGTCGatcatgttgttgttttttctgtta GAAAGCTAATAGGCATAATGCCAGGGAAAGTAAaagatcaatgttttttt tgctcaagcCTTACATTTTGTCTTtagtttttatttgaattttttgtttt tgtctgtTTGTTTCAACGATCTTTAAGCAATTTGGAAGCACTGTGAAGTT GAAAGTTAGAAAAAAGTGTAACTCTTAGATAATTATATACATATATTTTT GTCCTCGCATTTATTTAATTGTCTAATTAATTTGTTAGAGTATTTATTGC AAAATATGAATATAGTTTTTTACAAATAATcgaaaaagttgatatttgaA TTCATGTCGTTCTCCCAAAAACAACTGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000973XLOC_000973Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001839-exon-sc0000012-1491911889:824437..827044TCONS_00001839-exon-sc0000012-1491911889:824437..827044Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:824437..827044TCONS_00001839-exon-sc0000012-1510915933:824437..827044Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:824437..827044TCONS_00001839-exon-sc0000012-1575043694:824437..827044Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:827147..827839TCONS_00001839-exon-sc0000012-1491911889:827147..827839Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:827147..827839TCONS_00001839-exon-sc0000012-1510915933:827147..827839Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:827147..827839TCONS_00001839-exon-sc0000012-1575043694:827147..827839Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:828011..828048TCONS_00001839-exon-sc0000012-1491911889:828011..828048Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:828011..828048TCONS_00001839-exon-sc0000012-1510915933:828011..828048Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:828011..828048TCONS_00001839-exon-sc0000012-1575043694:828011..828048Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:828391..828783TCONS_00001839-exon-sc0000012-1491911889:828391..828783Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:828391..828783TCONS_00001839-exon-sc0000012-1510915933:828391..828783Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:828391..828783TCONS_00001839-exon-sc0000012-1575043694:828391..828783Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:828955..829151TCONS_00001839-exon-sc0000012-1491911889:828955..829151Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:828955..829151TCONS_00001839-exon-sc0000012-1510915933:828955..829151Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:828955..829151TCONS_00001839-exon-sc0000012-1575043694:828955..829151Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:829566..829711TCONS_00001839-exon-sc0000012-1491911889:829566..829711Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:829566..829711TCONS_00001839-exon-sc0000012-1510915933:829566..829711Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:829566..829711TCONS_00001839-exon-sc0000012-1575043694:829566..829711Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:831716..831822TCONS_00001839-exon-sc0000012-1491911889:831716..831822Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:831716..831822TCONS_00001839-exon-sc0000012-1510915933:831716..831822Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:831716..831822TCONS_00001839-exon-sc0000012-1575043694:831716..831822Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:832151..832248TCONS_00001839-exon-sc0000012-1491911889:832151..832248Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:832151..832248TCONS_00001839-exon-sc0000012-1510915933:832151..832248Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:832151..832248TCONS_00001839-exon-sc0000012-1575043694:832151..832248Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:832521..833166TCONS_00001839-exon-sc0000012-1491911889:832521..833166Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:832521..833166TCONS_00001839-exon-sc0000012-1510915933:832521..833166Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:832521..833166TCONS_00001839-exon-sc0000012-1575043694:832521..833166Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:824437..833166 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.740934 0.566429 0.0732258 0.0439209 1.52419 2.1212 70.2441 77.6044 13.0067 13.6925 69.9998 43.5464 89.6202 84.2333 60.1889 213.333 102.377 91.2602 0.746565 0.584735 67.4896 78.976 59.364 61.5394 86.7133 98.1191 12.0858 2.53767 1.3477 1.23799
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001839 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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