Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

XLOC_000973 (gene) - C. hemisphaerica

Overview
NameXLOC_000973
Unique NameXLOC_000973
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:824437..833166+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000973 ID=XLOC_000973|Name=XLOC_000973|organism=Clytia hemisphaerica|type=gene|length=8730bp|location=Sequence derived from alignment at sc0000012:824437..833166+ (Clytia hemisphaerica)
CTGAGAAAATAATCTGGAAGCTACCAagcccctccaaaatcgaattAAAG TGGAAATGCTGAAAATGCCATTCTTGCCCAAACTCTAAATTTATTTTAGA TTAGATCCAGAGCAAATTGCCTATATAATTTTACAGTAAAAGGCTTCAAA ATACAATATTTCCAAGCTTAAGACCGAGCTGTAGAATGGATATTTGTCCG ATCTACAGAAGAATAGTTTGCCGTGGGTTCTAATGATGTGAACAAAGCAA ACAAAAGAAACTTAAAACAATAAACAATGATACTCTTGTTTCTTTAAGCT TGGTTGGGCACAATaacattctttatttttcacagAAATAGTTCGTTCAC GTTATGTTAATTGAAACAGAGACAAAACAATGTTGAACTGTGCTTTTGAT TACTTTCTAATTAGACATAATTAACTAGACGAAGAAGTGAAAATTAAAGT TTGTACAAACAAATTATTGCTTACTGGCAAATGAACCAAACACCTGTCAC GAGCATGCCTAAAGTGTGCTAAATATTATGCAGAAAGAACAATTAACGAG TATTTTCTTCATGAATAATTAATGAAGTAAAATTACCAAGGCGTATCTTT TGTtcagtaaactttttttttcatcggAGAAGaccaattcaaattttatt atttgatacttgagaaaaattttagcgattaaaattttttctcaatgtgT CGGTaatattataaaatatttttgaaaataatattaggaaggaagaatat ttttaataaaTCATGTTGCCGGTCAAAGGCAATTTACTTGTGTtatcact tgtggttttttgTGTGGCTGTTAATGGCTTACCATTTAATGCTAAATATA GATTTGCTAGAGACACTGCAGAAGAATTAATCCCTGAAGAAGAGGGAAGT GGAAGTGGTAATTTATATGAACGTGATGCTATTGCTCAGAATGCTAGTGT ATTAGCTGCTCCAGTACCAGGAGGTCATGCTAATGCTACCAAAGAAGGAG CTAAAGACTCTAAAGCTGCATCTGAGAAAGCTGAAGCTAAGGAAGAACCA AAAGAGAAAGCTACTAAAGAGCAAAGTAAATCTTTCGATGATGGGCAATC GTTGACCAGCAGTGAATTCGCCAATAAACCAGCTGCTGATAATAAGGATG TTAAAGAAGCACCTAAAGTTGAAGAGAAGAAAGCTCAAAGTAAGAGTGAT ATCAATGAGAATCAAGCTGAGGATGAGGTGTCAGAACAACAAGAATCACC AGCTGAGGAAACTTCTGAAGAACAACCCGCTCAAGAAGGTGAAAGTGAAG AGGAACCAAGTGAAGAAGACGGAGGAAATGAGGAACAACAAGATAATGAA GAAAACCAAGAAGATTCTAACGAAGAAGATAGTGGTAACaatgaagaaga gaagaagAAAGATCAAGTTGCATCAAAcctcaaaatgttcttcatTTCAC CATACCAAAAGAACGGTGAAGAAGATCCATCTACCAGACAAATCTTGACT TACCCAGCTAAATCACAAGGATGGGGAAACACTCATCAGTTCGGACCATC TCACATTTGGAACAGTGATTACCCATATTTTGCATATGGATACAGTTGGG GCTGTGGACACCACGGCTATGGAGGTATCGGTCACGCTAAGAAATCTGGA GTTGCCAAAGAAGAAGATGCTCAATGCCGTGATTACGTTTTGATTCCTGC TGCCCCACAAGCATCAGCTGTGTTGTCACCTGCTGAAAATGGAGTTGCAC GAAATTTTGTCAACAAAGATATCGCATGCAACGACGGAGATACGGAATGC ACACAACGTCAAGTCATCGGTAGCATGGCAGGTGGATCTATGTTTGGTGA TGGAATGGGTGGTTTAGGTCTTGGATTCCCAGGTGTTCCAGGACTCCACA CTGGTATCAGTGGTTACAATATGGCTGGTGGTTTCGGTGACCATATGGGA AACGGACATGGCGGTCACCATGGAGGTCATCGTGGTGCACATGGAGGAGG TGCTGGTGGTGGATACGCTGGTGGTTATGGTGCTCATTTCTTCAAAGCTG AAGAGCATGGAATCCCAAGCTACTGGAACGCACGTGCTGATATTCCAAAA GGAGACGTCAAAGGATTCTTCGGTGGACGTGGAGCTGCCTTCTTCCACGG TGAAGACATTTTACCTATCCATGAAGCAGCTAACGGCATTGGATCAGGAA GCAGCTATGGCGTCGGTAGTGCACAATACTGGGACAAAACACCAAACTTT GGTGCCATTCATTCCGGATTCTTCGGTGGACGTGGTGGATTTGGAGGATA CGGTGGAGTCGGTTATGGAGGACGTGGTGGTTTCGGAGGATATGGTGGAC GCGGTTATGGATTAGGAGGACTCGGTGCCAACTGTGGAGGTACTGGATGT GGTGGTCTCGGCTTGGGAGGTCTTGGTGGTGGTCTCGGCATGGGAGGCCT TGGTGGTGGTTGTGCTGGTGCTGGCTGTGGTGTCGGTGTTGCACATGCTG GTCTTGGTGCTGGATGCATCGGCGATGGTTGCGGTGCTGGTATTGGGCAC GCAGGAGCTGGCTGTGTCGGAGATGCTTGCGGTCTTGGAGATGGCTGTGT TGGTGACGGTTGCGGTGCCGAACTTGGTGCCAGACTTGGTGCCGGACTTG GTGCTGGATGTGTTGGAGACGGTTGCGGTGCTGGATTAGGTGCTGGTTGT GTTGGTGCAGGTTGCGGTGCCGGACTTGGTGCAGGACTTGGTGCTGGACT TGGTGCTGGACTTGGTGCTGGATGCGTCGGAGACGGCTGTGGTGCTGGAT TAGGACATGGCTGTATCGGAGACGGATGTGTTGGTGAATTAGGACACGGT GGTAACTGCATTGGAGATGGATGCGGTGATGGATGTCTCGGAGATGGATG CAATGGAGGACACACTGCTATCCTTAGTGATGGTTGCGGCGGTGACGGTT GTGGTGGTGGATGGTCCATCGGTGGTCACCATGGACATGGTCTCGTTGCT AAATCCAAAACAAAACcaagcaaaaaatcaaagaCAACCAAGAAATCCAA AACAGCTAAAGCAACCACACGACAAGACATTGCCATGCCTGACGAACAAG CTATGATGGATGTCACTAAACAACGTCAATTGATTGGATCCTTGGGAGCA AGCACCTTGTTTGCTGATAATGTCGGTGGTATGGGATTAGGACATCCAGG TGTCCCACAAATGTCATCAGGTGTCGCTGGAATCCCAGGAGAATACGGAG GTTCTGGTGGATATTCTCATGGATGGGACGGGGAAGGTCCAGGATCTCAC CCACACGGATACAATAACTACGCTTACTCTGGTGGCAATCACGATTACCG ATCAGAAACACCAACTCCTGAAGAACCAGCACCAGCTAACACCGATGAAA ATGGTAAGCTCTTTTTGTAGTCTTACGTTTTcgtaacattttattttccc TTGTTTTCCTCCAGTACTTTATGCTATTACTAGCTTCTCTTATTTTTAAG CTACTGACAACCATATCTTTGTTATGAAATGGCTTAACTAATATTTAttg caaagtttttttctcatttttcagcTGAGAAGAGAGCTATCATCTACCCA AATGCTGAAATTGTAAGTattaattttgcaaaaattttcagCTTGCATCG AATACAACCatttaaacgatttttgaaAGAATAATTTTACAAGAATATTA GACTCAATTTGGCCCAAACTTAAGATCTAGTCAGAACAATATACGAGCCC CAGATTTTAGAAATTCGCcaagaaaatactttttttttatatacttttaa atacttttactttttcattattttgaagaATGCGTACATAGTTAAGATGT ATAACTACTAAGTAAAAtttattgactttgatttcgttGGAATGTGATTT TACCCTTCTGAACTTGAAGACTCCGATACTGAGGTATTTCACTACTTTCT TTAGGATAACGGATACTCCCACAACGCTGTTCAATACGCCAACGGTGGAT TCCCTGGTCGTGCAACCACCCAATACACCTCAGTCCACCATCAGTCAATC TCACATGACGATGGAGATGCTGATGGCTACGTTGATGGAGGCGCAGGATA CGTAGGTGGCGCCGCCGCTGCCGTCCCTGCTGTCAGTGCCGGATACGTCA CCGGAGGTGCTGTCCCAGCTGCTGGCTACCTCGGAGGAGCCAGTGTTGTT GGTAGTAGATATGCAGGATCAGGATATTTGGCACGCTCTTACCACCCACG ACATGTCCATGTTGGTGTCGGTACCCCAGGTGTCAAAGTCGAGGTTGAAA CTGCCAAATCTGTCATCACCTCAAAACCAGTTCATGTCACTGGACAGGTA TGGTcaaatcaaattatttcattcaccaaaaatgacgatataaaaacgtt ttaaatgAATGCGCACTTAAAGTTCAATAACTACCCCCATCACAATCAAC GTTCGATTTAGATTTATTGGAATCTGTAgcaattcttttaaaattcattt tcattttaaaattcaCAGAAAATGAGTGAAATCAAGAACATCGTCAAGGA TGTTACAGCTTCATTGGCTAAAACCAGCAAGAAATTGAAGTCCTTGAAAA CTGGTGCCAAACGTCAAATCACACCAGCTTTTACTCCAGTCGTTTCTGAG CCAGTCGGTGTCCCATCAAACAGATACCCAGTCCCAGCTGCCGACAGATA CCCATTAGGAGCTGGGTAAGCTATTTTCTCTTTTCAAGGTTATACATATC AAAGTTATGCAGACAGTCCCTGTAAAATACAGTCAATATATTTTTACCTC TACATATTTTTATGGAGAAGATAAAGGGTCAGTCGATGAAAGAGTCATAT ACTGTATCATCCTTTTTACAGATTACAATTACAggtgagtctccataact cgaacacccaCGAGTGTTTGCTCGAGTTAAgtaaatttcgagttatagag taagaTTAATAGGGCATTCTTAACTGGAGGGACGAAAAACTTGTTCGGAG GAGAAAttcaagttatagaggttcgagttaaagagattcTATTATACTGG AATTATTTTACGGGTTTTCACGGAGGGCACATGAAAATTTACTCTACTGA GAAACATTTAATTCTCTTTTGTCCTTCAGATACATCTGGCCATCAGCTAA CTACGGCCATCAATACGGAGGTCCATACTCATGGAGCAAATCTCACACAC CAAAAGCTGCCCCAGCTGTTGCTGCAAAACCAAGCACTGCCAAAACAAGC AAGAAAAGCAATACCAAGAAAAGCAGTAAGTTCACTTAAGCATGAATTTA TTTTGATGTGTTAAGCCTCGGGGATTGTACAGTCTATCCGTTGATCTCTT TTGCATTTACACTTGGCATGTATTTTTCCTTCGGGCTTGGTAAAGGAGAT TTTTATCCCTGCAGTATAGTAAATTATCTGATGAATTTTATTACGATTTT GTTGATGTTATTGTATTGTACAGGTGAAAAAGCTAAGCGTTCAGTATCTG TGAAAACACCAACGGTCGTAGTTGCCAAGAAAGGAGTCAACAAGAAAGGT TCCAAACGTCAGTTTATTCAACGTGGTTACGGAGGTCAGTTCCTTTACAA CAGCGATAAGGAATGATTTGCAAATTTCTCCCTGAAATTTTGTTACACTA CATACACACATAATAAAAACATTCACTCATACCATTTATAGGCATACAAA AACCTAGAaagtaaaatttggacaaaaaaaaacgaaaaatttgatttata aaataatgaaatttcatCAAGAATTCGCATTTCATTTCTTGGGCtatcat tttatttatttaatgtCAAAATTGATCTTTTGAGTATCATTATTtaaaca aaactttaaaaaaagattcgaAAACGAATAGCAACAAAATCAAAACGAAA AACAAATCCTGAATTCGAATTTTTTGTCCGTTCTAGGTATGCCTATATAT GGTATGGGAGGAGAAGGAGGAGAGGTCATGCCATCACCAAGGTCATTCGG ATATGGTGGTATCAGAGGTTATGGTAGTCATCATCTCATGGAAGGAGGTT TCGATGGATTCGGTGTCCCTGGAGGACATATGGGGTACGGTCATGTTGGT TATGGTCATCATGGGGGTTACCCAATGAGTGTATTGTCAAACCACGGTGA CTTTGGTGCTGGATACGCAGGTCCACTCGGTGGTAACTTTGATGCAGGAC ACCATGAATATGGAGTTGAAGGTGATATTGGTTTCGGTGGACATGGTTAT GGTGCAGGTTTAGGAGGTGCAGGGTTAGGAGGTGCAGGATTAGGAGGTGC AGGATTAGGAGGTGCCGGATTAGGTGGTCTCGGTGGACACTATGGTGGTA GATATGCTGGTCATGCCGGTATCTTTGGAGGTAGCTTCCATCATTTGGGA GGTCCTGGAATTGTTGGTGATTATGAAGGAGATCGCGGTGCATTGGTTAT GTCTGACCATGCTGGGTTTGGTGCACATGGATATGGAGGACCTGCATTAT TAGGTGGACGTGTTGGATTTGCTGGTGATCACGGTTACGGCTATGAAGGC CGCGCTGGTTTAGGATATGGCCATGGATTCGGTGGATATGGACATGGTAT TGGTTACGGACATGCTGGAGTCATGGACGGTCATTTAGGCTATGGTCATA CCAGTTTTGATGCTGGAGTACACGGTGGTCTAGGACTTGATATTGGTGCT CATGGTATTGAAGGACACAGTGGATATGGTGGTATGCACGGCTTTGTAGG TCTTCCTCATGCTGCTGGTGCTGGATTTCCAGGCTATGCTAGAGAAAGTA AGCATCCTTTAGATATAAAGCTACACAGTAAAAGCTATCAACAAAATAAG TTACACTTTAAAGTTTAGATCTTTTTTGTTAAGGACAGAGAATTTACTCA ACAAAATGTTATATTGTACCGAACGTGTAGCGAACAGTCCAACATcagaa atgtttaaaaatgttaGGACGCGTCATCCACTCGAAACCGTTGTAGAAAT AGCACTTCCTCCGCCGCGCGATATCGGTTTAGTGCCCACCCTCTCCAATA AGAGATGATATATATTCCATTATAATAGCTTTCATCAACGATAATCAAGA AATCTGCTACGAAACACTGATCTTCCGAAGCCTGTAAAATAATTCTTTCG GAATTTTAGTATTATTTTTACTGTAAAAGATATGATCTTAGGTTAAGTTA AAATCAGTAACGATATTTGAAAATTCTCTATTTTCTGCTCTGTCACtaat cttttattttcattattttctctTACCAGACATCGAACAAGCATCAGAag agcaacaacaacaacaatatgCACCAAGCAGCCGTTCAATGATGCCAGAT CCTATGTACAGCAACGAACAAGAACAATATGCACCAGTAAGTCCATTGTC TTACTTCACACAACTCTGAGTGACATCATATCTTTCATATGATCCTAGAA TCGGCGTTGCAACTTTTCCTTttgtagacgaaaatccgtccaGGGgactt ttttttagaatttctgTCTTAATTGTAAGCTTCTGACTAAGGGCCGTTTT TCCCTTTCGCTGCAAGTCCCAGTTAGGGCTGCAAATACACAAATTTGCAA GATTCATTTTTCTTAGGGTGCCATTTTTGGTAACAATTGATAAGAATTAG GAATCAGTTTCTATTAATCGGCAACCAAaagtttctaattttttattggA TACTTTTCTTTCAGGAGAGCCAGTACGAGATGCAACAACGTATGCAACCT GAATATATGTCAGCCAAAAAATCATCCGTACCAAAGAAAGCTAACCACTA AAGGAGAGAAAGGTATGGGGAGGACTCTACTTTCTATGTTTGGCAAAGTT TCTATGGCATCCACTACCTTAACATTTTTCCTTGATTGGCTTAACAAAGT CCCGCTAACCTTTCTACCTGATATTAAAAGTTTTGTAACTCAGGGAAGGT ATTCGAGCAATTTTGCGTAGAAATTTCAATTGCTTTCCACACACATCTAT TTGCTTTGTTTAAAATGTTAATCCTTATAATTAATGAAGATTGTTAAATA ATTATCATTAATTGACTTTTTACCTCGTTTCTAGAGCATTCAAGGATGGC TTTACAATCGCCAATATTGATGACTGGGTATTGAAGAACCAACCCAAATA TTGAATTTTCCTGCCGTAAAGATCCTCGGATGGGAGAAATGATCGTACAT ACACTGCTTCGCTACCATATTGCTTCAAAATAGATCAAATATGTGTCCAT TattattcatttaaaaaatttgtgttttattttatttgttacTAACCATG TCATACTATATAGGAGccttgtaaattttttaaaaattatatgtGTTCGG CTCAGGTTATACTTTATTTAGGGTCGatcatgttgttgttttttctgtta GAAAGCTAATAGGCATAATGCCAGGGAAAGTAAaagatcaatgttttttt tgctcaagcCTTACATTTTGTCTTtagtttttatttgaattttttgtttt tgtctgtTTGTTTCAACGATCTTTAAGCAATTTGGAAGCACTGTGAAGTT GAAAGTTAGAAAAAAGTGTAACTCTTAGATAATTATATACATATATTTTT GTCCTCGCATTTATTTAATTGTCTAATTAATTTGTTAGAGTATTTATTGC AAAATATGAATATAGTTTTTTACAAATAATcgaaaaagttgatatttgaA TTCATGTCGTTCTCCCAAAAACAACTGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001839TCONS_00001839Clytia hemisphaericatranscript
TCONS_00001840TCONS_00001840Clytia hemisphaericatranscript
TCONS_00001841TCONS_00001841Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001840-proteinTCONS_00001840-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:824437..833166 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FLG2PREDICTED: filaggrin-2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.97 0.87 0.55 0.24 3.06 3.6 117.4 131.05 24.34 28.53 128.52 81.37 184.46 173.8 116.43 404.16 197.82 174.42 0.82 0.95 112.83 127.71 96.68 104.72 162.19 177.74 20.06 5.4 2.2 1.68