TCONS_00001839 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001839
Unique NameTCONS_00001839
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4926

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001839 ID=TCONS_00001839|Name=TCONS_00001839|organism=Clytia hemisphaerica|type=transcript|length=4926bp
CTGAGAAAATAATCTGGAAGCTACCAagcccctccaaaatcgaattAAAG
TGGAAATGCTGAAAATGCCATTCTTGCCCAAACTCTAAATTTATTTTAGA
TTAGATCCAGAGCAAATTGCCTATATAATTTTACAGTAAAAGGCTTCAAA
ATACAATATTTCCAAGCTTAAGACCGAGCTGTAGAATGGATATTTGTCCG
ATCTACAGAAGAATAGTTTGCCGTGGGTTCTAATGATGTGAACAAAGCAA
ACAAAAGAAACTTAAAACAATAAACAATGATACTCTTGTTTCTTTAAGCT
TGGTTGGGCACAATaacattctttatttttcacagAAATAGTTCGTTCAC
GTTATGTTAATTGAAACAGAGACAAAACAATGTTGAACTGTGCTTTTGAT
TACTTTCTAATTAGACATAATTAACTAGACGAAGAAGTGAAAATTAAAGT
TTGTACAAACAAATTATTGCTTACTGGCAAATGAACCAAACACCTGTCAC
GAGCATGCCTAAAGTGTGCTAAATATTATGCAGAAAGAACAATTAACGAG
TATTTTCTTCATGAATAATTAATGAAGTAAAATTACCAAGGCGTATCTTT
TGTtcagtaaactttttttttcatcggAGAAGaccaattcaaattttatt
atttgatacttgagaaaaattttagcgattaaaattttttctcaatgtgT
CGGTaatattataaaatatttttgaaaataatattaggaaggaagaatat
ttttaataaaTCATGTTGCCGGTCAAAGGCAATTTACTTGTGTtatcact
tgtggttttttgTGTGGCTGTTAATGGCTTACCATTTAATGCTAAATATA
GATTTGCTAGAGACACTGCAGAAGAATTAATCCCTGAAGAAGAGGGAAGT
GGAAGTGGTAATTTATATGAACGTGATGCTATTGCTCAGAATGCTAGTGT
ATTAGCTGCTCCAGTACCAGGAGGTCATGCTAATGCTACCAAAGAAGGAG
CTAAAGACTCTAAAGCTGCATCTGAGAAAGCTGAAGCTAAGGAAGAACCA
AAAGAGAAAGCTACTAAAGAGCAAAGTAAATCTTTCGATGATGGGCAATC
GTTGACCAGCAGTGAATTCGCCAATAAACCAGCTGCTGATAATAAGGATG
TTAAAGAAGCACCTAAAGTTGAAGAGAAGAAAGCTCAAAGTAAGAGTGAT
ATCAATGAGAATCAAGCTGAGGATGAGGTGTCAGAACAACAAGAATCACC
AGCTGAGGAAACTTCTGAAGAACAACCCGCTCAAGAAGGTGAAAGTGAAG
AGGAACCAAGTGAAGAAGACGGAGGAAATGAGGAACAACAAGATAATGAA
GAAAACCAAGAAGATTCTAACGAAGAAGATAGTGGTAACaatgaagaaga
gaagaagAAAGATCAAGTTGCATCAAAcctcaaaatgttcttcatTTCAC
CATACCAAAAGAACGGTGAAGAAGATCCATCTACCAGACAAATCTTGACT
TACCCAGCTAAATCACAAGGATGGGGAAACACTCATCAGTTCGGACCATC
TCACATTTGGAACAGTGATTACCCATATTTTGCATATGGATACAGTTGGG
GCTGTGGACACCACGGCTATGGAGGTATCGGTCACGCTAAGAAATCTGGA
GTTGCCAAAGAAGAAGATGCTCAATGCCGTGATTACGTTTTGATTCCTGC
TGCCCCACAAGCATCAGCTGTGTTGTCACCTGCTGAAAATGGAGTTGCAC
GAAATTTTGTCAACAAAGATATCGCATGCAACGACGGAGATACGGAATGC
ACACAACGTCAAGTCATCGGTAGCATGGCAGGTGGATCTATGTTTGGTGA
TGGAATGGGTGGTTTAGGTCTTGGATTCCCAGGTGTTCCAGGACTCCACA
CTGGTATCAGTGGTTACAATATGGCTGGTGGTTTCGGTGACCATATGGGA
AACGGACATGGCGGTCACCATGGAGGTCATCGTGGTGCACATGGAGGAGG
TGCTGGTGGTGGATACGCTGGTGGTTATGGTGCTCATTTCTTCAAAGCTG
AAGAGCATGGAATCCCAAGCTACTGGAACGCACGTGCTGATATTCCAAAA
GGAGACGTCAAAGGATTCTTCGGTGGACGTGGAGCTGCCTTCTTCCACGG
TGAAGACATTTTACCTATCCATGAAGCAGCTAACGGCATTGGATCAGGAA
GCAGCTATGGCGTCGGTAGTGCACAATACTGGGACAAAACACCAAACTTT
GGTGCCATTCATTCCGGATTCTTCGGTGGACGTGGTGGATTTGGAGGATA
CGGTGGAGTCGGTTATGGAGGACGTGGTGGTTTCGGAGGATATGGTGGAC
GCGGTTATGGATTAGGAGGACTCGGTGCCAACTGTGGAGGTACTGGATGT
GGTGGTCTCGGCTTGGGAGGTCTTGGTGGTGGTCTCGGCATGGGAGGCCT
TGGTGGTGGTTGTGCTGGTGCTGGCTGTGGTGTCGGTGTTGCACATGCTG
GTCTTGGTGCTGGATGCATCGGCGATGGTTGCGGTGCTGGTATTGGGCAC
GCAGGAGCTGGCTGTGTCGGAGATGCTTGCGGTCTTGGAGATGGCTGTGT
TGGTGACGGTTGCGGTGCCGGACTTGGTGCAGGACTTGGTGCTGGACTTG
GTGCTGGACTTGGTGCTGGATGCGTCGGAGACGGCTGTGGTGCTGGATTA
GGACATGGCTGTATCGGAGACGGATGTGTTGGTGAATTAGGACACGGTGG
TAACTGCATTGGAGATGGATGCGGTGATGGATGTCTCGGAGATGGATGCA
ATGGAGGACACACTGCTATCCTTAGTGATGGTTGCGGCGGTGACGGTTGT
GGTGGTGGATGGTCCATCGGTGGTCACCATGGACATGGTCTCGTTGCTAA
ATCCAAAACAAAACcaagcaaaaaatcaaagaCAACCAAGAAATCCAAAA
CAGCTAAAGCAACCACACGACAAGACATTGCCATGCCTGACGAACAAGCT
ATGATGGATGTCACTAAACAACGTCAATTGATTGGATCCTTGGGAGCAAG
CACCTTGTTTGCTGATAATGTCGGTGGTATGGGATTAGGACATCCAGGTG
TCCCACAAATGTCATCAGGTGTCGCTGGAATCCCAGGAGAATACGGAGGT
TCTGGTGGATATTCTCATGGATGGGACGGGGAAGGTCCAGGATCTCACCC
ACACGGATACAATAACTACGCTTACTCTGGTGGCAATCACGATTACCGAT
CAGAAACACCAACTCCTGAAGAACCAGCACCAGCTAACACCGATGAAAAT
GcTGAGAAGAGAGCTATCATCTACCCAAATGCTGAAATTGATAACGGATA
CTCCCACAACGCTGTTCAATACGCCAACGGTGGATTCCCTGGTCGTGCAA
CCACCCAATACACCTCAGTCCACCATCAGTCAATCTCACATGACGATGGA
GATGCTGATGGCTACGTTGATGGAGGCGCAGGATACGTAGGTGGCGCCGC
CGCTGCCGTCCCTGCTGTCAGTGCCGGATACGTCACCGGAGGTGCTGTCC
CAGCTGCTGGCTACCTCGGAGGAGCCAGTGTTGTTGGTAGTAGATATGCA
GGATCAGGATATTTGGCACGCTCTTACCACCCACGACATGTCCATGTTGG
TGTCGGTACCCCAGGTGTCAAAGTCGAGGTTGAAACTGCCAAATCTGTCA
TCACCTCAAAACCAGTTCATGTCACTGGACAGAAAATGAGTGAAATCAAG
AACATCGTCAAGGATGTTACAGCTTCATTGGCTAAAACCAGCAAGAAATT
GAAGTCCTTGAAAACTGGTGCCAAACGTCAAATCACACCAGCTTTTACTC
CAGTCGTTTCTGAGCCAGTCGGTGTCCCATCAAACAGATACCCAGTCCCA
GCTGCCGACAGATACCCATTAGGAGCTGGATACATCTGGCCATCAGCTAA
CTACGGCCATCAATACGGAGGTCCATACTCATGGAGCAAATCTCACACAC
CAAAAGCTGCCCCAGCTGTTGCTGCAAAACCAAGCACTGCCAAAACAAGC
AAGAAAAGCAATACCAAGAAAAGCAACATCGAACAAGCATCAGAagagca
acaacaacaacaatatgCACCAAGCAGCCGTTCAATGATGCCAGATCCTA
TGTACAGCAACGAACAAGAACAATATGCACCAGAGAGCCAGTACGAGATG
CAACAACGTATGCAACCTGAATATATGTCAGCCAAAAAATCATCCGTACC
AAAGAAAGCTAACCACTAAAGGAGAGAAAGAGCATTCAAGGATGGCTTTA
CAATCGCCAATATTGATGACTGGGTATTGAAGAACCAACCCAAATATTGA
ATTTTCCTGCCGTAAAGATCCTCGGATGGGAGAAATGATCGTACATACAC
TGCTTCGCTACCATATTGCTTCAAAATAGATCAAATATGTGTCCATTatt
attcatttaaaaaatttgtgttttattttatttgttacTAACCATGTCAT
ACTATATAGGAGccttgtaaattttttaaaaattatatgtGTTCGGCTCA
GGTTATACTTTATTTAGGGTCGatcatgttgttgttttttctgttaGAAA
GCTAATAGGCATAATGCCAGGGAAAGTAAaagatcaatgttttttttgct
caagcCTTACATTTTGTCTTtagtttttatttgaattttttgtttttgtc
tgtTTGTTTCAACGATCTTTAAGCAATTTGGAAGCACTGTGAAGTTGAAA
GTTAGAAAAAAGTGTAACTCTTAGATAATTATATACATATATTTTTGTCC
TCGCATTTATTTAATTGTCTAATTAATTTGTTAGAGTATTTATTGCAAAA
TATGAATATAGTTTTTTACAAATAATcgaaaaagttgatatttgaATTCA
TGTCGTTCTCCCAAAAACAACTGGAT
Run BLAST on NCBI

transcript from alignment at sc0000012:824437..833166+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001839 ID=TCONS_00001839|Name=TCONS_00001839|organism=Clytia hemisphaerica|type=transcript|length=8730bp|location=Sequence derived from alignment at sc0000012:824437..833166+ (Clytia hemisphaerica)
CTGAGAAAATAATCTGGAAGCTACCAagcccctccaaaatcgaattAAAG
TGGAAATGCTGAAAATGCCATTCTTGCCCAAACTCTAAATTTATTTTAGA
TTAGATCCAGAGCAAATTGCCTATATAATTTTACAGTAAAAGGCTTCAAA
ATACAATATTTCCAAGCTTAAGACCGAGCTGTAGAATGGATATTTGTCCG
ATCTACAGAAGAATAGTTTGCCGTGGGTTCTAATGATGTGAACAAAGCAA
ACAAAAGAAACTTAAAACAATAAACAATGATACTCTTGTTTCTTTAAGCT
TGGTTGGGCACAATaacattctttatttttcacagAAATAGTTCGTTCAC
GTTATGTTAATTGAAACAGAGACAAAACAATGTTGAACTGTGCTTTTGAT
TACTTTCTAATTAGACATAATTAACTAGACGAAGAAGTGAAAATTAAAGT
TTGTACAAACAAATTATTGCTTACTGGCAAATGAACCAAACACCTGTCAC
GAGCATGCCTAAAGTGTGCTAAATATTATGCAGAAAGAACAATTAACGAG
TATTTTCTTCATGAATAATTAATGAAGTAAAATTACCAAGGCGTATCTTT
TGTtcagtaaactttttttttcatcggAGAAGaccaattcaaattttatt
atttgatacttgagaaaaattttagcgattaaaattttttctcaatgtgT
CGGTaatattataaaatatttttgaaaataatattaggaaggaagaatat
ttttaataaaTCATGTTGCCGGTCAAAGGCAATTTACTTGTGTtatcact
tgtggttttttgTGTGGCTGTTAATGGCTTACCATTTAATGCTAAATATA
GATTTGCTAGAGACACTGCAGAAGAATTAATCCCTGAAGAAGAGGGAAGT
GGAAGTGGTAATTTATATGAACGTGATGCTATTGCTCAGAATGCTAGTGT
ATTAGCTGCTCCAGTACCAGGAGGTCATGCTAATGCTACCAAAGAAGGAG
CTAAAGACTCTAAAGCTGCATCTGAGAAAGCTGAAGCTAAGGAAGAACCA
AAAGAGAAAGCTACTAAAGAGCAAAGTAAATCTTTCGATGATGGGCAATC
GTTGACCAGCAGTGAATTCGCCAATAAACCAGCTGCTGATAATAAGGATG
TTAAAGAAGCACCTAAAGTTGAAGAGAAGAAAGCTCAAAGTAAGAGTGAT
ATCAATGAGAATCAAGCTGAGGATGAGGTGTCAGAACAACAAGAATCACC
AGCTGAGGAAACTTCTGAAGAACAACCCGCTCAAGAAGGTGAAAGTGAAG
AGGAACCAAGTGAAGAAGACGGAGGAAATGAGGAACAACAAGATAATGAA
GAAAACCAAGAAGATTCTAACGAAGAAGATAGTGGTAACaatgaagaaga
gaagaagAAAGATCAAGTTGCATCAAAcctcaaaatgttcttcatTTCAC
CATACCAAAAGAACGGTGAAGAAGATCCATCTACCAGACAAATCTTGACT
TACCCAGCTAAATCACAAGGATGGGGAAACACTCATCAGTTCGGACCATC
TCACATTTGGAACAGTGATTACCCATATTTTGCATATGGATACAGTTGGG
GCTGTGGACACCACGGCTATGGAGGTATCGGTCACGCTAAGAAATCTGGA
GTTGCCAAAGAAGAAGATGCTCAATGCCGTGATTACGTTTTGATTCCTGC
TGCCCCACAAGCATCAGCTGTGTTGTCACCTGCTGAAAATGGAGTTGCAC
GAAATTTTGTCAACAAAGATATCGCATGCAACGACGGAGATACGGAATGC
ACACAACGTCAAGTCATCGGTAGCATGGCAGGTGGATCTATGTTTGGTGA
TGGAATGGGTGGTTTAGGTCTTGGATTCCCAGGTGTTCCAGGACTCCACA
CTGGTATCAGTGGTTACAATATGGCTGGTGGTTTCGGTGACCATATGGGA
AACGGACATGGCGGTCACCATGGAGGTCATCGTGGTGCACATGGAGGAGG
TGCTGGTGGTGGATACGCTGGTGGTTATGGTGCTCATTTCTTCAAAGCTG
AAGAGCATGGAATCCCAAGCTACTGGAACGCACGTGCTGATATTCCAAAA
GGAGACGTCAAAGGATTCTTCGGTGGACGTGGAGCTGCCTTCTTCCACGG
TGAAGACATTTTACCTATCCATGAAGCAGCTAACGGCATTGGATCAGGAA
GCAGCTATGGCGTCGGTAGTGCACAATACTGGGACAAAACACCAAACTTT
GGTGCCATTCATTCCGGATTCTTCGGTGGACGTGGTGGATTTGGAGGATA
CGGTGGAGTCGGTTATGGAGGACGTGGTGGTTTCGGAGGATATGGTGGAC
GCGGTTATGGATTAGGAGGACTCGGTGCCAACTGTGGAGGTACTGGATGT
GGTGGTCTCGGCTTGGGAGGTCTTGGTGGTGGTCTCGGCATGGGAGGCCT
TGGTGGTGGTTGTGCTGGTGCTGGCTGTGGTGTCGGTGTTGCACATGCTG
GTCTTGGTGCTGGATGCATCGGCGATGGTTGCGGTGCTGGTATTGGGCAC
GCAGGAGCTGGCTGTGTCGGAGATGCTTGCGGTCTTGGAGATGGCTGTGT
TGGTGACGGTTGCGGTGCCGAACTTGGTGCCAGACTTGGTGCCGGACTTG
GTGCTGGATGTGTTGGAGACGGTTGCGGTGCTGGATTAGGTGCTGGTTGT
GTTGGTGCAGGTTGCGGTGCCGGACTTGGTGCAGGACTTGGTGCTGGACT
TGGTGCTGGACTTGGTGCTGGATGCGTCGGAGACGGCTGTGGTGCTGGAT
TAGGACATGGCTGTATCGGAGACGGATGTGTTGGTGAATTAGGACACGGT
GGTAACTGCATTGGAGATGGATGCGGTGATGGATGTCTCGGAGATGGATG
CAATGGAGGACACACTGCTATCCTTAGTGATGGTTGCGGCGGTGACGGTT
GTGGTGGTGGATGGTCCATCGGTGGTCACCATGGACATGGTCTCGTTGCT
AAATCCAAAACAAAACcaagcaaaaaatcaaagaCAACCAAGAAATCCAA
AACAGCTAAAGCAACCACACGACAAGACATTGCCATGCCTGACGAACAAG
CTATGATGGATGTCACTAAACAACGTCAATTGATTGGATCCTTGGGAGCA
AGCACCTTGTTTGCTGATAATGTCGGTGGTATGGGATTAGGACATCCAGG
TGTCCCACAAATGTCATCAGGTGTCGCTGGAATCCCAGGAGAATACGGAG
GTTCTGGTGGATATTCTCATGGATGGGACGGGGAAGGTCCAGGATCTCAC
CCACACGGATACAATAACTACGCTTACTCTGGTGGCAATCACGATTACCG
ATCAGAAACACCAACTCCTGAAGAACCAGCACCAGCTAACACCGATGAAA
ATGGTAAGCTCTTTTTGTAGTCTTACGTTTTcgtaacattttattttccc
TTGTTTTCCTCCAGTACTTTATGCTATTACTAGCTTCTCTTATTTTTAAG
CTACTGACAACCATATCTTTGTTATGAAATGGCTTAACTAATATTTAttg
caaagtttttttctcatttttcagcTGAGAAGAGAGCTATCATCTACCCA
AATGCTGAAATTGTAAGTattaattttgcaaaaattttcagCTTGCATCG
AATACAACCatttaaacgatttttgaaAGAATAATTTTACAAGAATATTA
GACTCAATTTGGCCCAAACTTAAGATCTAGTCAGAACAATATACGAGCCC
CAGATTTTAGAAATTCGCcaagaaaatactttttttttatatacttttaa
atacttttactttttcattattttgaagaATGCGTACATAGTTAAGATGT
ATAACTACTAAGTAAAAtttattgactttgatttcgttGGAATGTGATTT
TACCCTTCTGAACTTGAAGACTCCGATACTGAGGTATTTCACTACTTTCT
TTAGGATAACGGATACTCCCACAACGCTGTTCAATACGCCAACGGTGGAT
TCCCTGGTCGTGCAACCACCCAATACACCTCAGTCCACCATCAGTCAATC
TCACATGACGATGGAGATGCTGATGGCTACGTTGATGGAGGCGCAGGATA
CGTAGGTGGCGCCGCCGCTGCCGTCCCTGCTGTCAGTGCCGGATACGTCA
CCGGAGGTGCTGTCCCAGCTGCTGGCTACCTCGGAGGAGCCAGTGTTGTT
GGTAGTAGATATGCAGGATCAGGATATTTGGCACGCTCTTACCACCCACG
ACATGTCCATGTTGGTGTCGGTACCCCAGGTGTCAAAGTCGAGGTTGAAA
CTGCCAAATCTGTCATCACCTCAAAACCAGTTCATGTCACTGGACAGGTA
TGGTcaaatcaaattatttcattcaccaaaaatgacgatataaaaacgtt
ttaaatgAATGCGCACTTAAAGTTCAATAACTACCCCCATCACAATCAAC
GTTCGATTTAGATTTATTGGAATCTGTAgcaattcttttaaaattcattt
tcattttaaaattcaCAGAAAATGAGTGAAATCAAGAACATCGTCAAGGA
TGTTACAGCTTCATTGGCTAAAACCAGCAAGAAATTGAAGTCCTTGAAAA
CTGGTGCCAAACGTCAAATCACACCAGCTTTTACTCCAGTCGTTTCTGAG
CCAGTCGGTGTCCCATCAAACAGATACCCAGTCCCAGCTGCCGACAGATA
CCCATTAGGAGCTGGGTAAGCTATTTTCTCTTTTCAAGGTTATACATATC
AAAGTTATGCAGACAGTCCCTGTAAAATACAGTCAATATATTTTTACCTC
TACATATTTTTATGGAGAAGATAAAGGGTCAGTCGATGAAAGAGTCATAT
ACTGTATCATCCTTTTTACAGATTACAATTACAggtgagtctccataact
cgaacacccaCGAGTGTTTGCTCGAGTTAAgtaaatttcgagttatagag
taagaTTAATAGGGCATTCTTAACTGGAGGGACGAAAAACTTGTTCGGAG
GAGAAAttcaagttatagaggttcgagttaaagagattcTATTATACTGG
AATTATTTTACGGGTTTTCACGGAGGGCACATGAAAATTTACTCTACTGA
GAAACATTTAATTCTCTTTTGTCCTTCAGATACATCTGGCCATCAGCTAA
CTACGGCCATCAATACGGAGGTCCATACTCATGGAGCAAATCTCACACAC
CAAAAGCTGCCCCAGCTGTTGCTGCAAAACCAAGCACTGCCAAAACAAGC
AAGAAAAGCAATACCAAGAAAAGCAGTAAGTTCACTTAAGCATGAATTTA
TTTTGATGTGTTAAGCCTCGGGGATTGTACAGTCTATCCGTTGATCTCTT
TTGCATTTACACTTGGCATGTATTTTTCCTTCGGGCTTGGTAAAGGAGAT
TTTTATCCCTGCAGTATAGTAAATTATCTGATGAATTTTATTACGATTTT
GTTGATGTTATTGTATTGTACAGGTGAAAAAGCTAAGCGTTCAGTATCTG
TGAAAACACCAACGGTCGTAGTTGCCAAGAAAGGAGTCAACAAGAAAGGT
TCCAAACGTCAGTTTATTCAACGTGGTTACGGAGGTCAGTTCCTTTACAA
CAGCGATAAGGAATGATTTGCAAATTTCTCCCTGAAATTTTGTTACACTA
CATACACACATAATAAAAACATTCACTCATACCATTTATAGGCATACAAA
AACCTAGAaagtaaaatttggacaaaaaaaaacgaaaaatttgatttata
aaataatgaaatttcatCAAGAATTCGCATTTCATTTCTTGGGCtatcat
tttatttatttaatgtCAAAATTGATCTTTTGAGTATCATTATTtaaaca
aaactttaaaaaaagattcgaAAACGAATAGCAACAAAATCAAAACGAAA
AACAAATCCTGAATTCGAATTTTTTGTCCGTTCTAGGTATGCCTATATAT
GGTATGGGAGGAGAAGGAGGAGAGGTCATGCCATCACCAAGGTCATTCGG
ATATGGTGGTATCAGAGGTTATGGTAGTCATCATCTCATGGAAGGAGGTT
TCGATGGATTCGGTGTCCCTGGAGGACATATGGGGTACGGTCATGTTGGT
TATGGTCATCATGGGGGTTACCCAATGAGTGTATTGTCAAACCACGGTGA
CTTTGGTGCTGGATACGCAGGTCCACTCGGTGGTAACTTTGATGCAGGAC
ACCATGAATATGGAGTTGAAGGTGATATTGGTTTCGGTGGACATGGTTAT
GGTGCAGGTTTAGGAGGTGCAGGGTTAGGAGGTGCAGGATTAGGAGGTGC
AGGATTAGGAGGTGCCGGATTAGGTGGTCTCGGTGGACACTATGGTGGTA
GATATGCTGGTCATGCCGGTATCTTTGGAGGTAGCTTCCATCATTTGGGA
GGTCCTGGAATTGTTGGTGATTATGAAGGAGATCGCGGTGCATTGGTTAT
GTCTGACCATGCTGGGTTTGGTGCACATGGATATGGAGGACCTGCATTAT
TAGGTGGACGTGTTGGATTTGCTGGTGATCACGGTTACGGCTATGAAGGC
CGCGCTGGTTTAGGATATGGCCATGGATTCGGTGGATATGGACATGGTAT
TGGTTACGGACATGCTGGAGTCATGGACGGTCATTTAGGCTATGGTCATA
CCAGTTTTGATGCTGGAGTACACGGTGGTCTAGGACTTGATATTGGTGCT
CATGGTATTGAAGGACACAGTGGATATGGTGGTATGCACGGCTTTGTAGG
TCTTCCTCATGCTGCTGGTGCTGGATTTCCAGGCTATGCTAGAGAAAGTA
AGCATCCTTTAGATATAAAGCTACACAGTAAAAGCTATCAACAAAATAAG
TTACACTTTAAAGTTTAGATCTTTTTTGTTAAGGACAGAGAATTTACTCA
ACAAAATGTTATATTGTACCGAACGTGTAGCGAACAGTCCAACATcagaa
atgtttaaaaatgttaGGACGCGTCATCCACTCGAAACCGTTGTAGAAAT
AGCACTTCCTCCGCCGCGCGATATCGGTTTAGTGCCCACCCTCTCCAATA
AGAGATGATATATATTCCATTATAATAGCTTTCATCAACGATAATCAAGA
AATCTGCTACGAAACACTGATCTTCCGAAGCCTGTAAAATAATTCTTTCG
GAATTTTAGTATTATTTTTACTGTAAAAGATATGATCTTAGGTTAAGTTA
AAATCAGTAACGATATTTGAAAATTCTCTATTTTCTGCTCTGTCACtaat
cttttattttcattattttctctTACCAGACATCGAACAAGCATCAGAag
agcaacaacaacaacaatatgCACCAAGCAGCCGTTCAATGATGCCAGAT
CCTATGTACAGCAACGAACAAGAACAATATGCACCAGTAAGTCCATTGTC
TTACTTCACACAACTCTGAGTGACATCATATCTTTCATATGATCCTAGAA
TCGGCGTTGCAACTTTTCCTTttgtagacgaaaatccgtccaGGGgactt
ttttttagaatttctgTCTTAATTGTAAGCTTCTGACTAAGGGCCGTTTT
TCCCTTTCGCTGCAAGTCCCAGTTAGGGCTGCAAATACACAAATTTGCAA
GATTCATTTTTCTTAGGGTGCCATTTTTGGTAACAATTGATAAGAATTAG
GAATCAGTTTCTATTAATCGGCAACCAAaagtttctaattttttattggA
TACTTTTCTTTCAGGAGAGCCAGTACGAGATGCAACAACGTATGCAACCT
GAATATATGTCAGCCAAAAAATCATCCGTACCAAAGAAAGCTAACCACTA
AAGGAGAGAAAGGTATGGGGAGGACTCTACTTTCTATGTTTGGCAAAGTT
TCTATGGCATCCACTACCTTAACATTTTTCCTTGATTGGCTTAACAAAGT
CCCGCTAACCTTTCTACCTGATATTAAAAGTTTTGTAACTCAGGGAAGGT
ATTCGAGCAATTTTGCGTAGAAATTTCAATTGCTTTCCACACACATCTAT
TTGCTTTGTTTAAAATGTTAATCCTTATAATTAATGAAGATTGTTAAATA
ATTATCATTAATTGACTTTTTACCTCGTTTCTAGAGCATTCAAGGATGGC
TTTACAATCGCCAATATTGATGACTGGGTATTGAAGAACCAACCCAAATA
TTGAATTTTCCTGCCGTAAAGATCCTCGGATGGGAGAAATGATCGTACAT
ACACTGCTTCGCTACCATATTGCTTCAAAATAGATCAAATATGTGTCCAT
TattattcatttaaaaaatttgtgttttattttatttgttacTAACCATG
TCATACTATATAGGAGccttgtaaattttttaaaaattatatgtGTTCGG
CTCAGGTTATACTTTATTTAGGGTCGatcatgttgttgttttttctgtta
GAAAGCTAATAGGCATAATGCCAGGGAAAGTAAaagatcaatgttttttt
tgctcaagcCTTACATTTTGTCTTtagtttttatttgaattttttgtttt
tgtctgtTTGTTTCAACGATCTTTAAGCAATTTGGAAGCACTGTGAAGTT
GAAAGTTAGAAAAAAGTGTAACTCTTAGATAATTATATACATATATTTTT
GTCCTCGCATTTATTTAATTGTCTAATTAATTTGTTAGAGTATTTATTGC
AAAATATGAATATAGTTTTTTACAAATAATcgaaaaagttgatatttgaA
TTCATGTCGTTCTCCCAAAAACAACTGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000973XLOC_000973Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001839-exon-sc0000012-1491911889:824437..827044TCONS_00001839-exon-sc0000012-1491911889:824437..827044Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:824437..827044TCONS_00001839-exon-sc0000012-1510915933:824437..827044Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:824437..827044TCONS_00001839-exon-sc0000012-1575043694:824437..827044Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:827147..827839TCONS_00001839-exon-sc0000012-1491911889:827147..827839Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:827147..827839TCONS_00001839-exon-sc0000012-1510915933:827147..827839Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:827147..827839TCONS_00001839-exon-sc0000012-1575043694:827147..827839Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:828011..828048TCONS_00001839-exon-sc0000012-1491911889:828011..828048Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:828011..828048TCONS_00001839-exon-sc0000012-1510915933:828011..828048Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:828011..828048TCONS_00001839-exon-sc0000012-1575043694:828011..828048Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:828391..828783TCONS_00001839-exon-sc0000012-1491911889:828391..828783Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:828391..828783TCONS_00001839-exon-sc0000012-1510915933:828391..828783Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:828391..828783TCONS_00001839-exon-sc0000012-1575043694:828391..828783Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:828955..829151TCONS_00001839-exon-sc0000012-1491911889:828955..829151Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:828955..829151TCONS_00001839-exon-sc0000012-1510915933:828955..829151Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:828955..829151TCONS_00001839-exon-sc0000012-1575043694:828955..829151Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:829566..829711TCONS_00001839-exon-sc0000012-1491911889:829566..829711Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:829566..829711TCONS_00001839-exon-sc0000012-1510915933:829566..829711Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:829566..829711TCONS_00001839-exon-sc0000012-1575043694:829566..829711Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:831716..831822TCONS_00001839-exon-sc0000012-1491911889:831716..831822Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:831716..831822TCONS_00001839-exon-sc0000012-1510915933:831716..831822Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:831716..831822TCONS_00001839-exon-sc0000012-1575043694:831716..831822Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:832151..832248TCONS_00001839-exon-sc0000012-1491911889:832151..832248Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:832151..832248TCONS_00001839-exon-sc0000012-1510915933:832151..832248Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:832151..832248TCONS_00001839-exon-sc0000012-1575043694:832151..832248Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1491911889:832521..833166TCONS_00001839-exon-sc0000012-1491911889:832521..833166Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1510915933:832521..833166TCONS_00001839-exon-sc0000012-1510915933:832521..833166Clytia hemisphaericaexon
TCONS_00001839-exon-sc0000012-1575043694:832521..833166TCONS_00001839-exon-sc0000012-1575043694:832521..833166Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:824437..833166 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.740934	0.566429	0.0732258	0.0439209	1.52419	2.1212	70.2441	77.6044	13.0067	13.6925	69.9998	43.5464	89.6202	84.2333	60.1889	213.333	102.377	91.2602	0.746565	0.584735	67.4896	78.976	59.364	61.5394	86.7133	98.1191	12.0858	2.53767	1.3477	1.23799
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001839 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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