TCONS_00001758 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001758
Unique NameTCONS_00001758
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4074

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001758 ID=TCONS_00001758|Name=TCONS_00001758|organism=Clytia hemisphaerica|type=transcript|length=4074bp
ttttATCAGCTGAAATTGATAGAAAGGTTTAAACTGTTTTTCTTTGCTTA
GTGGTCAGAGAGGAGTATTATTATTGTCTGTCTCTAAAGAAGGGTGTCAG
AATTAGATGAGGGATGTTGATATTAGACCAGACGGTACTGAACGATAAAT
TTGATTGTCGAAGTAATCAATAATGATGGAAGTAATCAAACAACCACTTA
TCGATTAACAATCGAATGTCAAGTACCAAAATTTCAGAAAAATTGTGAGT
ATTCGATCACTTTCTTAACAACCCTTCAAAGACTCCATAACCGTCCGAGT
ACTTTGATTGTTATTGATTACTTTCGATAACTTTGACAACTTTGCTAACC
AATTGATTACTTTGACGATAACCAATTACCGTCAACTGCTCTAACTTGGG
ACTATCTGACAAAAAATGGGACGGCAATCCGGCCACCATTTCACCGAACC
TCCAAAGTCATTTGATTTGAGTTAATAAATGGCATATATATAAAAAAATA
AAAGATTTCTCTTTTGCACCGAGTAGGCTTTTAAATCGAAATATGAAAAA
ATCCATAGTGGAACACACGCAAATGTCTGGAACGAAGAAGACCATATTAG
TGGCAAAACGATGGAGCGTTTAACGTCACTCCCGCTGCAAGTTACACACT
CGTTATTTGTTAACCCCATCAGGCACTAGACGGTTAGGCGTTCTGTAATT
CTCCAAACGACGTCCCGTCATTTGGAATGAAAACAAAAAGTTACAAAGGA
CACACTATCAGTGAAAGTTAGTATGGTGACATGTTAATAAACTTGGTAGA
ATTATCAAAACGAATTTGTTGTCAAAGACATTTAACAGTAAGTGAAAATA
CAGGCCAGATATCAAACAGTCCCACCATGTTTCGACCAATCATCCCAAGT
TAGAGCAGTTGATGGTATTATGATATATCTTTAAGAAAAACTAAAAAAAC
TGATCTAAAACCAAAGCACAAAAAGAAGCCCCTCCATAAAGATTGACCCC
CTTATTTCCCAGCCATTTTCCCTTGCCATTTTGTGTGGCCTTCGCCCTGG
GTTTCCTCAAGTGCTACTGGAAACATATTTGATAAAATTGAAGGCTGGAA
ATTACTGAGTACAATCGAAGGTATTCAATATGATTGAAGGTAATCGAAAT
GATTGAACAAATCGAAAATGGTCGAAGAAAATGCCATAATCTGGAGTCGA
GTGAGGCCAAGCCCAATTGATAGTTTGGTTCGTGTCCTCCGACCGACTCT
AAATTTTTGAGAAAAAGTGTTTCACTTTGAGTTGGAAAAATCAAAACAAA
TTTACCTCCTTTTCACATGATAACTACTATCTCTGCAGTTCTTTTCTAAC
TGACTGCTTTGATTCTTCTATAAACAACATCCAATTTGCGCACAGAAAAT
GTCCCGGTGTAGCAGAAACTCACAGCTGTATTCCTTTAAGCACACGCCGC
AAACGCCTTTATTTCCAACTAGAACCTATCTTGCGATCGCGTCGAGTGCC
GTTGTGGATCCGGGCTTTTGACTATTTTTTTACACTCGCGTTTGGATTCC
AGGATTGCACGATTGTTTGAGGAATTTCAAAAATAGAGGTTTTTGGTGGG
AAAATGAAAAAAAGGTTCCAATTTTAGCTACCGACCGACCGACCCATTTT
TCAGAGCTTCTAGGACACGAACCAAACAATCAATTGGGCCTGGCCTGAGT
ATTCAATCACCGATAAAATTGGATAGGGGGTGTCACTGACCACCTTCGAT
TATTATCGATCATTATTGATTACTTCCTTCACAATCGAACGTTCAATTAG
TACCGTAAGTTGGTCTAATATCGACCCAATAAAGACGACCCTAGGTATAG
CACCAACTTTTTCAGGCCACTCGCATGTTTTGAAATTGTTTTTATCCCAA
AAAAAAAGAATTAAAAAAAGGTTACAAAACTTTACCTCCTGTAACTAAGA
AATACGACAACAAAACGCATGAAAAAACAAACATTGCAGATGGAGCTTTG
ATCCATGTTGGCTTCTTAATCTTCAAATTTGGTGGCTCCAAAAATTGGAA
AGGTAATGTGAAAAAGAATTCCATTTTTGTGAACCTTCCACCAAACTTTT
GCCTTCGGATTGACGTGTTGACGTGATTGAGTCCCTGTAGCTACTGCACG
AATTTGGTTCGAAAACGAGGCTTGTTATCTAACTTCTGATTGGCTTAGAC
TTCGGCCGCTTCAAATTGATTGGTCAAAGGTCTCAAAAGCGGCGAATCTG
AACTTCTTGAATATCGAAAGGCCATCATTTTGAAAAGAGACTCAAAGTGT
GAACATCTCCAAACCGTCAAATGACTCAAATAATACTTCATTCACCCACC
TTCCATTTTCACTAACCTTCCACATACATTTTTTCACAATGAGTACCAAA
GAAGATAGTCAACGTTTAAATGAATacaaaagaatagaaaaaattggTGA
AGGCACCTACGGTATTGTTTACAAAGCTAAACACACCCCAACTGGGGAAT
TGGTTGCTTTAAAGAAGATTCGTCTGGAAACTGATGACGAAGGGTGCCCA
TCCACCGCTATTAGGGAAATTTCGATTCTCAAAGAATTAAGGAAATATCC
TTTTATTGTCCAACTCCAAGATGTTATTCACAGTGAATCAAAGTTGTATT
TGGTTTTCGAATTCTTGTTGATGGACTTGAAGAAATACATTGATACAGTC
CAAGGACCCATTGACCAAGCCTTAATCAAAAGTTACACATATCAAATTTG
TGCTGCTCTGGAATTTTGTCATGCAAGGAGGATCATCCATCGTGATTTGA
AGCCACAGAATCTTCTAATTGATTCCAAAGGATTGATCAAGATTGCTGAT
TTTGGTCTTGGGAGATCTTTTGGTGTTCCTATCAGGGCATTTACTCACGA
GGTTGTAACGTTATGGTACAGGTGTCCAGAAGTTTTGCTGGGTATGAAGA
GATATTCATGCGGTATTGACACTTGGAGTATTGGATGTATTTTCGCTGAA
ATGGTCACCAAGAAACCCATCTTCCAAGGAGATTCTGAAATTGATGAAAT
CTTCAAGATATTCCAAATTTTGGGTACACCAAGTAATGCTGAGTGGGAAG
GTGTTGAAGAATTACCCGATTACAAGAATGCATTCCCCAAATGGAAACCA
AAGAATTTAAAAGACCTTCTACCTGATATGGAGCCTGCAGGAATCGACCT
ACTTCAGaaaTTCCTGATTTACCAGCCAGCATCGAGAATGTCAGCAAGGA
AAGCATTAAAGCACCCATACTTTTTCGACTTTGATCCTTCCACATTGCCA
CAACCTCCAGAAGATATCCTGTAAGTGGTGTAATACATCAGAATACTTTA
AAATGGTGTCAATCGCACAACCAAAATGTAtcttttcaaatagttttaca
tGAAGCGATGGTAATGTAGTCATGTCGAGATGACGACCCAATCTAGCGTT
CTATGAGAGAAAGAGAAGGAAAGGAGATCAGGCATCAATAAAAACACTGT
AtatatgaaataaattaaatttgacaaaCAATATTCACACTTGCATGTAT
CATAAATGTAAAcattttcttgttttatttttcatggaaattgaTGCGAA
AATCATTACTATAATTACTAATGACATTTATATCAAGTGCTCTATTTTTG
TTCCGAATTATtatattttggatttttttttaaattgagatAATGAAATT
GAGATCCTATGATGATATTgaataagatttaataattcTTCAACCTCTTG
CCCTTCTTTTTGCGATGAacaaaaagttaattttggTAATGGTAACCTTT
TTAACGGGCCGACTTTTATCAcagattttttatgaaattttaaattcata
CTTATATTCTCACGGTACTAAATGTAATTAACtgactttattttttataa
taggATATAAAGAAAGTACTTAAAACGTAATTTgtccgacgaaaaaaaat
tcatttataATTGTTTTTGCAAATGTAACTTACTTTGATCacataaaatt
tcgcgggtGTTAAATTTtgagtcccaatggaaatttggaaaggccttGTA
TGGAGTCTTGTGCGGGAATGGGAA
Run BLAST on NCBI

protein sequence of TCONS_00001758-protein

>TCONS_00001758-protein ID=TCONS_00001758-protein|Name=TCONS_00001758-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MSTKEDSQRLNEYKRIEKIGEGTYGIVYKAKHTPTGELVALKKIRLETDD
EGCPSTAIREISILKELRKYPFIVQLQDVIHSESKLYLVFEFLLMDLKKY
IDTVQGPIDQALIKSYTYQICAALEFCHARRIIHRDLKPQNLLIDSKGLI
KIADFGLGRSFGVPIRAFTHEVVTLWYRCPEVLLGMKRYSCGIDTWSIGC
IFAEMVTKKPIFQGDSEIDEIFKIFQILGTPSNAEWEGVEELPDYKNAFP
KWKPKNLKDLLPDMEPAGIDLLQKFLIYQPASRMSARKALKHPYFFDFDP
STLPQPPEDIL
Run BLAST on NCBI

transcript from alignment at sc0000012:4757..15166+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001758 ID=TCONS_00001758|Name=TCONS_00001758|organism=Clytia hemisphaerica|type=transcript|length=10410bp|location=Sequence derived from alignment at sc0000012:4757..15166+ (Clytia hemisphaerica)
ttttATCAGCTGAAATTGATAGAAAGGTTTAAACTGTTTTTCTTTGCTTA
GTGGTCAGAGAGGAGTATTATTATTGTCTGTCTCTAAAGAAGGGTGTCAG
AATTAGATGAGGGATGTTGATATTAGACCAGACGGTACTGAACGATAAAT
TTGATTGTCGAAGTAATCAATAATGATGGAAGTAATCAAACAACCACTTA
TCGATTAACAATCGAATGTCAAGTACCAAAATTTCAGAAAAATTGTGAGT
ATTCGATCACTTTCTTAACAACCCTTCAAAGACTCCATAACCGTCCGAGT
ACTTTGATTGTTATTGATTACTTTCGATAACTTTGACAACTTTGCTAACC
AATTGATTACTTTGACGATAACCAATTACCGTCAACTGCTCTAACTTGGG
ACTATCTGACAAAAAATGGGACGGCAATCCGGCCACCATTTCACCGAACC
TCCAAAGTCATTTGATTTGAGTTAATAAATGGCATATATATAAAAAAATA
AAAGATTTCTCTTTTGCACCGAGTAGGCTTTTAAATCGAAATATGAAAAA
ATCCATAGTGGAACACACGCAAATGTCTGGAACGAAGAAGACCATATTAG
TGGCAAAACGATGGAGCGTTTAACGTCACTCCCGCTGCAAGTTACACACT
CGTTATTTGTTAACCCCATCAGGCACTAGACGGTTAGGCGTTCTGTAATT
CTCCAAACGACGTCCCGTCATTTGGAATGAAAACAAAAAGTTACAAAGGA
CACACTATCAGTGAAAGTTAGTATGGTGACATGTTAATAAACTTGGTAGA
ATTATCAAAACGAATTTGTTGTCAAAGACATTTAACAGTAAGTGAAAATA
CAGGCCAGATATCAAACAGTCCCACCATGTTTCGACCAATCATCCCAAGT
TAGAGCAGTTGATGGTATTATGATATATCTTTAAGAAAAACTAAAAAAAC
TGATCTAAAACCAAAGCACAAAAAGAAGCCCCTCCATAAAGATTGACCCC
CTTATTTCCCAGCCATTTTCCCTTGCCATTTTGTGTGGCCTTCGCCCTGG
GTTTCCTCAAGTGCTACTGGAAACATATTTGATAAAATTGAAGGCTGGAA
ATTACTGAGTACAATCGAAGGTATTCAATATGATTGAAGGTAATCGAAAT
GATTGAACAAATCGAAAATGGTCGAAGAAAATGCCATAATCTGGAGTCGA
GTGAGGCCAAGCCCAATTGATAGTTTGGTTCGTGTCCTCCGACCGACTCT
AAATTTTTGAGAAAAAGTGTTTCACTTTGAGTTGGAAAAATCAAAACAAA
TTTACCTCCTTTTCACATGATAACTACTATCTCTGCAGTTCTTTTCTAAC
TGACTGCTTTGATTCTTCTATAAACAACATCCAATTTGCGCACAGAAAAT
GTCCCGGTGTAGCAGAAACTCACAGCTGTATTCCTTTAAGCACACGCCGC
AAACGCCTTTATTTCCAACTAGAACCTATCTTGCGATCGCGTCGAGTGCC
GTTGTGGATCCGGGCTTTTGACTATTTTTTTACACTCGCGTTTGGATTCC
AGGATTGCACGATTGTTTGAGGAATTTCAAAAATAGAGGTTTTTGGTGGG
AAAATGAAAAAAAGGTTCCAATTTTAGCTACCGACCGACCGACCCATTTT
TCAGAGCTTCTAGGACACGAACCAAACAATCAATTGGGCCTGGCCTGAGT
ATTCAATCACCGATAAAATTGGATAGGGGGTGTCACTGACCACCTTCGAT
TATTATCGATCATTATTGATTACTTCCTTCACAATCGAACGTTCAATTAG
TACCGTAAGTTGGTCTAATATCGACCCAATAAAGACGACCCTAGGTATAG
CACCAACTTTTTCAGGCCACTCGCATGTTTTGAAATTGTTTTTATCCCAA
AAAAAAAGAATTAAAAAAAGGTTACAAAACTTTACCTCCTGTAACTAAGA
AATACGACAACAAAACGCATGAAAAAACAAACATTGCAGATGGAGCTTTG
ATCCATGTTGGCTTCTTAATCTTCAAATTTGGTGGCTCCAAAAATTGGAA
AGGTAATGTGAAAAAGAATTCCATTTTTGTGAACCTTCCACCAAACTTTT
GCCTTCGGATTGACGTGTTGACGTGATTGAGTCCCTGTAGCTACTGCACG
AATTTGGTTCGAAAACGAGGCTTGTTATCTAACTTCTGATTGGCTTAGAC
TTCGGCCGCTTCAAATTGATTGGTCAAAGGTCTCAAAAGCGGCGAATCTG
AACTTCTTGAATATCGAAAGGCCATCATTTTGAAAAGAGACTCAAAGTGT
GAACATCTCCAAACCGTCAAATGGTATGAGTGTTTTCTGTAGACAGTTCA
TGTTTGTTTGTCGATAAAGTCTGTTTGATTCGCCCCTCTGCTCATGTATA
TCCACAGTGACCCAATACTATGCATAATCTGCTTCTTCTGAGTTTAAATC
TCGTAGAGTTTATTCACTAAAAAAGTCCATCTGCCTGAACAGGAAAGGAC
TTCGGTGTTTGTTTGTAAACTCTGGCGATTCCAACATCAGTCTAAATCTT
TCTGTGTTCAGGGATTTGAATTAATACCTTTTCTTGAAGCCTACATATGA
CCCAGTTTGCAAAGTGTGGCACATTTGCTTGNTTGTTTGTAAACTCTGGC
AATTCCAACATCAGTCTAAATCTTTCTGTGTTCAGGGATTTGAATTAATA
CCTTTTCTTGAAGCCTACATATGACCCAGTTTGCAAAGTGTGGCACATTT
GCTTGAGATATTGAGTGCACAACTTGTAAAAAATCGAGTGCAGGTGCAAA
ATATATCTAAGGTTTTCAGGTGTAGTGTTCAGCTATCTTTTCCTCTAGTG
CAGccaatttgagcaattttttgcctttttgggcaaatttccgAGCTATA
GATGCACCTTGTCCGGATTTATATCAGGTGCGTTCTTCGAGTGCGGAACG
AATTTTTCTTCGAGTGCAGCCTTcttgccatactctgcaaactggcaTAT
GACTGATAACTAaaagaatgtttttatttgCATGCGACACAGACTCTACT
CTTTTTAAAACCTTACCTAAATTAAGCAGTAGTGATAATTGACACACTTT
TCAAGAAGGGAAGGGAGGTCTGTTTTTAAAGATTTCCTAGGGGCTACCAT
GCTATATTTATTAGACAGCGTGGTATAGTGTAGTCATTGagcttggttgc
tgcacagacGACTGAGGTTTGATttccactcgcagcggttcacttgacaa
gtgaatgaaccttcgcccaggtcaacccatgccatgctATGtgccagacc
cccgcgctcgataggatcgatcatcggaacggctcgatgacggatcgata
tgtgatcgatggattacttatcgatccggataggagatcgatagaggatc
gataccgtaacttggtctaatgtcgacatccctcctctaaattcgacacc
cttttctagagctgaaaaattaaaaaaaggtcgaaattattttatttgct
tagtggtaagggaggataaatcttttttcaatcaccgaTTCCGACTTTCA
TACtattcctatctttaaagaagggtgtcgaaattagaagacggatgtcg
agattagaccaacttacggtactcaagatttttttaagcttatgattatt
tatcgatctatcatcgatctatcatcgatcttttatcgatcttatcgacc
ctaacAACTctatcgagtatatcgattcgtcatcaatGCATAATCGATGa
tgaatcgattaacgatcgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTT
Ccctcgatctcctatccggatcgataagtaatccatcgatcacatatcga
tccgtcatcgagccgttccgatgatcgatcctatcgagcgcgggggtctg
gtatGTGAGAGGAATTGGGTAGTCGGACGGCGCGCTCATTGAAAGTGTCT
ATATTTgcaaaaataggcctcaaagcctcctgcaactcaaccaaatagaa
atagaaatattctAGAAAGGCCAACGTCAAAAAAGGCCATTTTTCTGTCC
ATAAAATCAGCTATTCCAAACCAAAGTTTCATTGATTCAAATCGGCACAA
GAAGAGACAGCATCTCTGATAAACCAACTTAGCAGGATGCCCTTCTTTAA
GAGGTAGTattcaactttataagaaaggCTTTTTATGACATTAAACATGA
TCATTTCTGCTATTTTGGTATTCTCCAAATGGTAATGGTTTTTGAAATag
cccatttttctaagaaaatagCAGAAAGAATATGTTTTAGTAACACCTTG
CTTAGCTCCAAAGCTTTTTGTGTTCCTGTTTGAACCTGCGCATAATTTCc
tgtttgttttcatttcatGGATGAAAATCATTCAGCCTTGCTTAATTTAC
ACACTTTTGTTTTGACACATCTCAGTCTGGGATGGGAAATCCTCTTAATT
GCGGCTTAACTTTGATTATTATTAGCTATcatagaatttagaaaatagcT
AGAATTTTTTAAGGGTGCAATTACATACTTATCACTATTTGAATGGGTGT
TAAAGCATGTAATTTCATCCTGAACTAGTCTATCATTTAAAAAGACTTGA
TTAGCTCCCGACCGCTTCATTGAAATCAGAAAGTCTTGGACTATCTTACT
AAAAAATTTTGAGGCCCGCAATCTTCGAGTTagcaatttcaattttgact
cTGGTTGAGTTCTTAGCTGACTGGttttatgtaaaaaatcaaattcaagt
TAATTCTTTCTAGCTCGAAAatccatttttgaaaattaaaaatcaagtta
gattcacgtgacgtcataatttgcacttttatgacgtcataatttagctg
ACTCGAAGATTCCAGGCCTGAAAATTTATCCTACAAAACAATCATGTTAA
AGCTTTAGCTCATTTGACCATGTATTaacccaatttttttaaatcggaAC
CCTCTAATCTGTtcaagcaatttcaaccggggcaggatcataagcgtgca
attgcacatGGGCATAAATTTTAACTGTGTAATTGCGGGCTTACAGCCTT
GGGAGTCAAGTGTGTAATTAAGAGGTTTACAACAATACAACATATCTAAA
TTCTTTACAGCTCACTAAGTCAGTTTTATCACAAAACATTTCTAAGAGGC
TTCTTGTCTTGTTGAGCCTCCAAGCAAATATTTGGCTTATGTCTATAGAG
TGGAAAATACATCGTGTATTTATAAAAACACATTGTGAAAACTAAAAGAT
TGTCTATTCGATCCCTAGGCCTTCACAAAAGAAAGTTTTCTGTTACAGTA
GTCATGCCAAGAatgggatcagacccctttccgcactattcCCTGCCTCT
GAAAATTACCTTGCTCCATCTAAGCATAAAAAGTTGTAATTTGACGAATT
TTTAACGATTATCATTTTCCCTaaggtagttctaattcaagaataaaTGG
AAGGGATTTAAGTAAACTGTATGTAATATTGCtggttgaaataaatgaaa
gaaaaactaaGCATATCTATACACCCAAAATGACATTGTGATATTTGcga
tgttagcttttttaggcttatgcaAATTAATGGATAGAAATAGACATGGA
ATACACCTCCCTGAGCTTAGGGGGGCTAAACCATTTGCatttttccattt
atttttcaaaaaatactgggggTCAGCTTGCTAGGGGGGCTGAGTGTGTG
TAATAGAATTGggggcagagctgataggttcaagatattttaaattatgt
taaaaatctatgctgcggggaaggttttatccctcttgaaaaaaaatttc
tttgatattttgttttgtgaagGTGGGGGGGTATGTTTCTAGAATTCAGC
TTGGGCTATTTTCCTTTGCCCtctgaaaaatgctgggggctggacccctc
tgcacactatgttaAATGGTGAATACCACTAAAATAATAACCATATTCTT
GATCCATCACAACATCTCATAAAACCAGTTTTTTTCAATGTTGATATGGT
TTTGGTGAGTCCCCCAATGTCTACAATCAAATTATTCCATCCCgctcatt
tttccccaccctggcttcaaaaaaCTCCCCCTCCCCCCTCGTAAGTCCCT
TTGGTTTCAAAACCCATTCCCTGGAATCCAGGGGGAGAACGTTATAATGT
CTGTTAAAAAATTTGGTCCTTTGCTCATAACTTGCAAGATAATTACCAAT
CATGCCTACAATGGTTTTTCATCCACTCCTACAAAAATGTGTTTTTGAAG
TATGAAAAGTGACTTTAAATGCAATATTTGCACAGGCGATAGAATCAGAT
AGAATAACAGCTtaaaaatttcccaaatttcTTGATTctggaaaatattt
atttgatttctGTTGCTTTTTATTATTCTGGAAACTGAGTCAAATACTCA
AAAATAGATACTTTACTCTCTGATTTttgtttaattatttttaacacTTC
TAATGTTTTCATGTCTTGCTAAAAATGGGTCTAGTAATTTTATACATTAG
GACTAAGCTAGAGAACTTCTGTTATTGTCAAAAAATtactttactttcat
tttctagACTCAAATAATACTTCATTCACCCACCTTCCATTTTCACTAAC
CTTCCACATACATTTTTTCACAATGAGTACCAAAGAAGATAGTCAACGTT
TAAATGAATacaaaagaatagaaaaaattggTGAAGGTAAGCTCTCCTTG
ACAGAACTATATATTCAAAGCAATTCACTAGTCTCTTAAACTTGAATccc
ttaaaaaaatttgaacaaataaaTTTATTGGTTTTGCTTTATTTTGTAAT
GAACCTTTCCACCTCAAACTCCAGAACTCAAATTTTACTCAAAAGGTTTT
CTTGCTCCTTAACAGAATATCAATGCAGTAACTGGAATTCTCCTTAGATA
GAACAATTCATTTTTATCATCCTCAAGTGATGAAACCTGATTGTTAACAT
TTGActtatataaatataaatattattttataGGCACCTACGGTATTGTT
TACAAAGCTAAACACACCCCAACTGGGGAATTGGTTGCTTTAAAGAAGAT
TCGTCTGGAAACTGATGACGAAGGGTGCCCATCCACCGCTATTAGGGAAA
TTTCGATTCTCAAAGAATTAAGGAAATATCCTTTTATTGTCCAGTAAGTT
ATTACTGACTACATTAGTATTTACTAGTCTATCTATGGACTATATTTTAC
ACTTTTGAAAAGAAGTGACCAAGCCCTCCCAAAAAATGTATGATGGGCAG
CAGAGAAGGAAATACAATTAAAAAGCAAGCATCTTTTAGAAGTAGAGTTA
CTGCACACTGATTAAGGTGTCCATTTCTCCTGTAATAAGCTTTGCCATAt
tttaaatttatgcaaaccGCTTTGAAGTGTTTTTGTGCTAATTCAATTAC
AGGtctctgttaattaatcattgAGGTAGGTTTTGATTGTCAGATTGGTC
TCTTTTTTTGTAATAGACTCCAAGATGTTATTCACAGTGAATCAAAGTTG
TATTTGGTTTTCGAATTCTTGTTGATGGACTTGAAGAAATACATTGATAC
AGTCCAAGGACCCATTGACCAAGCCTTAATCAAAGTAAGTCAATGCTCAA
GTTAAGTCAGACCAACCTTTGAAACCTTGACAAGGAATGTTTTCCGACCC
CAACAAAAAAACTCCAGAAATTTACTTTCCTAATTCAGCTTTCCTTGAAC
AGAAAAAACCTTGTATTTTAGCAACTGAGATACATAACTTCCACCAAATG
ATGGGGGTCAACTATGAAGTCCCTGAGGTCAAACATTTACATGGCATTGA
ATAGACCATATCGGCTTtccaaattctccccgaatgatttcccatgatgc
attgcgcaaaaaattcacggaaagtcaatatcgtctgtgaatttttttgc
gcaatgcatcatgggtaatcattcggggagaattcggaaagccgatatcg
tctattgtaaTAAGAAATACAGTCATCTCTATGAAAGTTTTAGCCATGTT
AATGAAGAGGAAACCAGGCTTATTTTATGCTGCCTATCAATAACTTCTTT
TGAGCTAGAATAAATCCAATTGATTTACTAATACATTGTATTTTAGAGTT
ACACATATCAAATTTGTGCTGCTCTGGAATTTTGTCATGCAAGGAGGATC
ATCCATCGTGATTTGAAGCCACAGAATCTTCTAATTGATTCCAAAGGATT
GATCAAGATTGCTGATTTTGGTCTTGGGAGATCTTTTGGTGTTCCTATCA
GGGCATTTACTCACGAGGTTTGTCCCTATCTGAGTAGACATAATATACTT
TAAGTACTAATCTTTTAGAGCCTTTTAAAAGGGTCACACttaaaaactga
aagaaaacatCTATGCTTGAGGAAACGTATAGTTATGATGAAGTTTAAGT
TAAGCATTGATAGATTGCCTCATTAAATTCTTGATTAGTTGTATAGGTGT
AAGAAGTTAGCTTGATTGAGAGATATAGAAATCATTACATTGAAATTTAC
TGATAGAATAGACTTTGATTTTCTTGTCTTTCTCCTCAGGTTGTAACGTT
ATGGTACAGGTGTCCAGAAGTTTTGCTGGGTATGAAGAGATATTCATGCG
GTATTGACACTTGGAGTATTGGATGTATTTTCGCTGAAATGGTCACCAAG
AAACCCATCTTCCAAGGAGATTCTGAAATTGATGAAATCTTCAAGATATT
CCAGTAAGCAAGCAATATAAATGCTAAAAACATCTTTTGATTCCAATTTC
AAAAACCCAAAATCATTTATTTTGTCCTGTAAATAAAATTTATAGTTCAA
TATCTCCATGTtggctcaaaaacattttatggTAATCTAACCTGAGCACT
TTGCTCCAACACCTACACAAGTAACAAGTAACTAATCAATACTCAAAAAc
ggtgttttattttttatctccACAGAATTTTGGGTACACCAAGTAATGCT
GAGTGGGAAGGTGTTGAAGAATTACCCGATTACAAGAATGCATTCCCCAA
ATGGAAACCAAAGAATTTAAAAGACCTTCTACCTGATATGGAGCCTGCAG
GAATCGACCTACTTCAGGTAAGAAGTTTGAGCAGCATGGTTGCttatgtt
tgaaaaaaatttcacaaaataaattctatAATTTGAACCCAGTCTCAATC
TCTGTGGGAGGTCAAACGTATGCAAAAAACGTGCCAACAAACCTCTTCGG
CTCTTTCATAACAACCAAAGTTGAAACTGTTAACGTTTCTTGAGAAATTG
ATAAATGTTTTGAAGAATGacgaaagaaaaagaatttcttCCCTCCTCCT
TTCTTGCATTAACGTAATAACTCAAAgttctttcttcttttagaaaTTCC
TGATTTACCAGCCAGCATCGAGAATGTCAGCAAGGAAAGCATTAAAGCAC
CCATACTTTTTCGACTTTGATCCTTCCACATTGCCACAACCTCCAGAAGA
TATCCTGTAAGTGGTGTAATACATCAGAATACTTTAAAATGGTGTCAATC
GCACAACCAAAATGTAtcttttcaaatagttttacatGAAGCGATGGTAA
TGTAGTCATGTCGAGATGACGACCCAATCTAGCGTTCTATGAGAGAAAGA
GAAGGAAAGGAGATCAGGCATCAATAAAAACACTGTAtatatgaaataaa
ttaaatttgacaaaCAATATTCACACTTGCATGTATCATAAATGTAAAca
ttttcttgttttatttttcatggaaattgaTGCGAAAATCATTACTATAA
TTACTAATGACATTTATATCAAGTGCTCTATTTTTGTTCCGAATTATtat
attttggatttttttttaaattgagatAATGAAATTGAGATCCTATGATG
ATATTgaataagatttaataattcTTCAACCTCTTGCCCTTCTTTTTGCG
ATGAacaaaaagttaattttggTAATGGTAACCTTTTTAACGGGCCGACT
TTTATCAcagattttttatgaaattttaaattcataCTTATATTCTCACG
GTACTAAATGTAATTAACtgactttattttttataataggATATAAAGAA
AGTACTTAAAACGTAATTTgtccgacgaaaaaaaattcatttataATTGT
TTTTGCAAATGTAACTTACTTTGATCacataaaatttcgcgggtGTTAAA
TTTtgagtcccaatggaaatttggaaaggccttGTATGGAGTCTTGTGCG
GGAATGGGAA

Coding sequence (CDS) from alignment at sc0000012:4757..15166+

>TCONS_00001758 ID=TCONS_00001758|Name=TCONS_00001758|organism=Clytia hemisphaerica|type=CDS|length=6552bp|location=Sequence derived from alignment at sc0000012:4757..15166+ (Clytia hemisphaerica)
ATGAGTACCAAAGAAGATAGTCAACGTTTAAATGAATacaaaagaataga
aaaaattggTGAAGGCACCTACGGTATTGTTTACAAAGCTAAACACACCC
CAACTGGGGAATTGGTTGCTTTAAAGAAGATTCGTCTGGAAACTGATGAC
GAAGGGTGCCCATCCACCGCTATTAGGGAAATTTCGATTCTCAAAGAATT
AAGGAAATATCCTTTTATTGTCCAACTCCAAGATGTTATTCACAGTGAAT
CAAAGTTGTATTTGGTTTTCGAATTCTTGTTGATGGACTTGAAGAAATAC
ATTGATACAGTCCAAGGACCCATTGACCAAGCCTTAATCAAAAGTTACAC
ATATCAAATTTGTGCTGCTCTGGAATTTTGTCATGCAAGGAGGATCATCC
ATCGTGATTTGAAGCCACAGAATCTTCTAATTGATTCCAAAGGATTGATC
AAGATTGCTGATTTTGGTCTTGGGAGATCTTTTGGTGTTCCTATCAGGGC
ATTTACTCACGAGGTTGTAACGTTATGGTACAGGTGTCCAGAAGTTTTGC
TGGGTATGAAGAGATATTCATGCGGTATTGACACTTGGAGTATTGGATGT
ATTTTCGCTGAAATGGTCACCAAGAAACCCATCTTCCAAGGAGATTCTGA
AATTGATGAAATCTTCAAGATATTCCAAATTTTGGGTACACCAAGTAATG
CTGAGTGGGAAGGTGTTGAAGAATTACCCGATTACAAGAATGCATTCCCC
AAATGGAAACCAAAGAATTTAAAAGACCTTCTACCTGATATGGAGCCTGC
AGGAATCGACCTACTTCAGaaaTTCCTGATTTACCAGCCAGCATCGAGAA
TGTCAGCAAGGAAAGCATTAAAGCACCCATACTTTTTCGACTTTGATCCT
TCCACATTGCCACAACCTCCAGAAGATATCCTGTAAATGAGTACCAAAGA
AGATAGTCAACGTTTAAATGAATacaaaagaatagaaaaaattggTGAAG
GCACCTACGGTATTGTTTACAAAGCTAAACACACCCCAACTGGGGAATTG
GTTGCTTTAAAGAAGATTCGTCTGGAAACTGATGACGAAGGGTGCCCATC
CACCGCTATTAGGGAAATTTCGATTCTCAAAGAATTAAGGAAATATCCTT
TTATTGTCCAACTCCAAGATGTTATTCACAGTGAATCAAAGTTGTATTTG
GTTTTCGAATTCTTGTTGATGGACTTGAAGAAATACATTGATACAGTCCA
AGGACCCATTGACCAAGCCTTAATCAAAAGTTACACATATCAAATTTGTG
CTGCTCTGGAATTTTGTCATGCAAGGAGGATCATCCATCGTGATTTGAAG
CCACAGAATCTTCTAATTGATTCCAAAGGATTGATCAAGATTGCTGATTT
TGGTCTTGGGAGATCTTTTGGTGTTCCTATCAGGGCATTTACTCACGAGG
TTGTAACGTTATGGTACAGGTGTCCAGAAGTTTTGCTGGGTATGAAGAGA
TATTCATGCGGTATTGACACTTGGAGTATTGGATGTATTTTCGCTGAAAT
GGTCACCAAGAAACCCATCTTCCAAGGAGATTCTGAAATTGATGAAATCT
TCAAGATATTCCAAATTTTGGGTACACCAAGTAATGCTGAGTGGGAAGGT
GTTGAAGAATTACCCGATTACAAGAATGCATTCCCCAAATGGAAACCAAA
GAATTTAAAAGACCTTCTACCTGATATGGAGCCTGCAGGAATCGACCTAC
TTCAGaaaTTCCTGATTTACCAGCCAGCATCGAGAATGTCAGCAAGGAAA
GCATTAAAGCACCCATACTTTTTCGACTTTGATCCTTCCACATTGCCACA
ACCTCCAGAAGATATCCTGTAAATGAGTACCAAAGAAGATAGTCAACGTT
TAAATGAATacaaaagaatagaaaaaattggTGAAGGCACCTACGGTATT
GTTTACAAAGCTAAACACACCCCAACTGGGGAATTGGTTGCTTTAAAGAA
GATTCGTCTGGAAACTGATGACGAAGGGTGCCCATCCACCGCTATTAGGG
AAATTTCGATTCTCAAAGAATTAAGGAAATATCCTTTTATTGTCCAACTC
CAAGATGTTATTCACAGTGAATCAAAGTTGTATTTGGTTTTCGAATTCTT
GTTGATGGACTTGAAGAAATACATTGATACAGTCCAAGGACCCATTGACC
AAGCCTTAATCAAAAGTTACACATATCAAATTTGTGCTGCTCTGGAATTT
TGTCATGCAAGGAGGATCATCCATCGTGATTTGAAGCCACAGAATCTTCT
AATTGATTCCAAAGGATTGATCAAGATTGCTGATTTTGGTCTTGGGAGAT
CTTTTGGTGTTCCTATCAGGGCATTTACTCACGAGGTTGTAACGTTATGG
TACAGGTGTCCAGAAGTTTTGCTGGGTATGAAGAGATATTCATGCGGTAT
TGACACTTGGAGTATTGGATGTATTTTCGCTGAAATGGTCACCAAGAAAC
CCATCTTCCAAGGAGATTCTGAAATTGATGAAATCTTCAAGATATTCCAA
ATTTTGGGTACACCAAGTAATGCTGAGTGGGAAGGTGTTGAAGAATTACC
CGATTACAAGAATGCATTCCCCAAATGGAAACCAAAGAATTTAAAAGACC
TTCTACCTGATATGGAGCCTGCAGGAATCGACCTACTTCAGaaaTTCCTG
ATTTACCAGCCAGCATCGAGAATGTCAGCAAGGAAAGCATTAAAGCACCC
ATACTTTTTCGACTTTGATCCTTCCACATTGCCACAACCTCCAGAAGATA
TCCTGTAAATGAGTACCAAAGAAGATAGTCAACGTTTAAATGAATacaaa
agaatagaaaaaattggTGAAGGCACCTACGGTATTGTTTACAAAGCTAA
ACACACCCCAACTGGGGAATTGGTTGCTTTAAAGAAGATTCGTCTGGAAA
CTGATGACGAAGGGTGCCCATCCACCGCTATTAGGGAAATTTCGATTCTC
AAAGAATTAAGGAAATATCCTTTTATTGTCCAACTCCAAGATGTTATTCA
CAGTGAATCAAAGTTGTATTTGGTTTTCGAATTCTTGTTGATGGACTTGA
AGAAATACATTGATACAGTCCAAGGACCCATTGACCAAGCCTTAATCAAA
AGTTACACATATCAAATTTGTGCTGCTCTGGAATTTTGTCATGCAAGGAG
GATCATCCATCGTGATTTGAAGCCACAGAATCTTCTAATTGATTCCAAAG
GATTGATCAAGATTGCTGATTTTGGTCTTGGGAGATCTTTTGGTGTTCCT
ATCAGGGCATTTACTCACGAGGTTGTAACGTTATGGTACAGGTGTCCAGA
AGTTTTGCTGGGTATGAAGAGATATTCATGCGGTATTGACACTTGGAGTA
TTGGATGTATTTTCGCTGAAATGGTCACCAAGAAACCCATCTTCCAAGGA
GATTCTGAAATTGATGAAATCTTCAAGATATTCCAAATTTTGGGTACACC
AAGTAATGCTGAGTGGGAAGGTGTTGAAGAATTACCCGATTACAAGAATG
CATTCCCCAAATGGAAACCAAAGAATTTAAAAGACCTTCTACCTGATATG
GAGCCTGCAGGAATCGACCTACTTCAGaaaTTCCTGATTTACCAGCCAGC
ATCGAGAATGTCAGCAAGGAAAGCATTAAAGCACCCATACTTTTTCGACT
TTGATCCTTCCACATTGCCACAACCTCCAGAAGATATCCTGTAAATGAGT
ACCAAAGAAGATAGTCAACGTTTAAATGAATacaaaagaatagaaaaaat
tggTGAAGGCACCTACGGTATTGTTTACAAAGCTAAACACACCCCAACTG
GGGAATTGGTTGCTTTAAAGAAGATTCGTCTGGAAACTGATGACGAAGGG
TGCCCATCCACCGCTATTAGGGAAATTTCGATTCTCAAAGAATTAAGGAA
ATATCCTTTTATTGTCCAACTCCAAGATGTTATTCACAGTGAATCAAAGT
TGTATTTGGTTTTCGAATTCTTGTTGATGGACTTGAAGAAATACATTGAT
ACAGTCCAAGGACCCATTGACCAAGCCTTAATCAAAAGTTACACATATCA
AATTTGTGCTGCTCTGGAATTTTGTCATGCAAGGAGGATCATCCATCGTG
ATTTGAAGCCACAGAATCTTCTAATTGATTCCAAAGGATTGATCAAGATT
GCTGATTTTGGTCTTGGGAGATCTTTTGGTGTTCCTATCAGGGCATTTAC
TCACGAGGTTGTAACGTTATGGTACAGGTGTCCAGAAGTTTTGCTGGGTA
TGAAGAGATATTCATGCGGTATTGACACTTGGAGTATTGGATGTATTTTC
GCTGAAATGGTCACCAAGAAACCCATCTTCCAAGGAGATTCTGAAATTGA
TGAAATCTTCAAGATATTCCAAATTTTGGGTACACCAAGTAATGCTGAGT
GGGAAGGTGTTGAAGAATTACCCGATTACAAGAATGCATTCCCCAAATGG
AAACCAAAGAATTTAAAAGACCTTCTACCTGATATGGAGCCTGCAGGAAT
CGACCTACTTCAGaaaTTCCTGATTTACCAGCCAGCATCGAGAATGTCAG
CAAGGAAAGCATTAAAGCACCCATACTTTTTCGACTTTGATCCTTCCACA
TTGCCACAACCTCCAGAAGATATCCTGTAAATGAGTACCAAAGAAGATAG
TCAACGTTTAAATGAATacaaaagaatagaaaaaattggTGAAGGCACCT
ACGGTATTGTTTACAAAGCTAAACACACCCCAACTGGGGAATTGGTTGCT
TTAAAGAAGATTCGTCTGGAAACTGATGACGAAGGGTGCCCATCCACCGC
TATTAGGGAAATTTCGATTCTCAAAGAATTAAGGAAATATCCTTTTATTG
TCCAACTCCAAGATGTTATTCACAGTGAATCAAAGTTGTATTTGGTTTTC
GAATTCTTGTTGATGGACTTGAAGAAATACATTGATACAGTCCAAGGACC
CATTGACCAAGCCTTAATCAAAAGTTACACATATCAAATTTGTGCTGCTC
TGGAATTTTGTCATGCAAGGAGGATCATCCATCGTGATTTGAAGCCACAG
AATCTTCTAATTGATTCCAAAGGATTGATCAAGATTGCTGATTTTGGTCT
TGGGAGATCTTTTGGTGTTCCTATCAGGGCATTTACTCACGAGGTTGTAA
CGTTATGGTACAGGTGTCCAGAAGTTTTGCTGGGTATGAAGAGATATTCA
TGCGGTATTGACACTTGGAGTATTGGATGTATTTTCGCTGAAATGGTCAC
CAAGAAACCCATCTTCCAAGGAGATTCTGAAATTGATGAAATCTTCAAGA
TATTCCAAATTTTGGGTACACCAAGTAATGCTGAGTGGGAAGGTGTTGAA
GAATTACCCGATTACAAGAATGCATTCCCCAAATGGAAACCAAAGAATTT
AAAAGACCTTCTACCTGATATGGAGCCTGCAGGAATCGACCTACTTCAGa
aaTTCCTGATTTACCAGCCAGCATCGAGAATGTCAGCAAGGAAAGCATTA
AAGCACCCATACTTTTTCGACTTTGATCCTTCCACATTGCCACAACCTCC
AGAAGATATCCTGTAAATGAGTACCAAAGAAGATAGTCAACGTTTAAATG
AATacaaaagaatagaaaaaattggTGAAGGCACCTACGGTATTGTTTAC
AAAGCTAAACACACCCCAACTGGGGAATTGGTTGCTTTAAAGAAGATTCG
TCTGGAAACTGATGACGAAGGGTGCCCATCCACCGCTATTAGGGAAATTT
CGATTCTCAAAGAATTAAGGAAATATCCTTTTATTGTCCAACTCCAAGAT
GTTATTCACAGTGAATCAAAGTTGTATTTGGTTTTCGAATTCTTGTTGAT
GGACTTGAAGAAATACATTGATACAGTCCAAGGACCCATTGACCAAGCCT
TAATCAAAAGTTACACATATCAAATTTGTGCTGCTCTGGAATTTTGTCAT
GCAAGGAGGATCATCCATCGTGATTTGAAGCCACAGAATCTTCTAATTGA
TTCCAAAGGATTGATCAAGATTGCTGATTTTGGTCTTGGGAGATCTTTTG
GTGTTCCTATCAGGGCATTTACTCACGAGGTTGTAACGTTATGGTACAGG
TGTCCAGAAGTTTTGCTGGGTATGAAGAGATATTCATGCGGTATTGACAC
TTGGAGTATTGGATGTATTTTCGCTGAAATGGTCACCAAGAAACCCATCT
TCCAAGGAGATTCTGAAATTGATGAAATCTTCAAGATATTCCAAATTTTG
GGTACACCAAGTAATGCTGAGTGGGAAGGTGTTGAAGAATTACCCGATTA
CAAGAATGCATTCCCCAAATGGAAACCAAAGAATTTAAAAGACCTTCTAC
CTGATATGGAGCCTGCAGGAATCGACCTACTTCAGaaaTTCCTGATTTAC
CAGCCAGCATCGAGAATGTCAGCAAGGAAAGCATTAAAGCACCCATACTT
TTTCGACTTTGATCCTTCCACATTGCCACAACCTCCAGAAGATATCCTGT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000943XLOC_000943Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001758-proteinTCONS_00001758-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001758-exon-sc0000012-1491911889:4757..7079TCONS_00001758-exon-sc0000012-1491911889:4757..7079Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1510915933:4757..7079TCONS_00001758-exon-sc0000012-1510915933:4757..7079Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1575043694:4757..7079TCONS_00001758-exon-sc0000012-1575043694:4757..7079Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1491911889:11514..11642TCONS_00001758-exon-sc0000012-1491911889:11514..11642Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1510915933:11514..11642TCONS_00001758-exon-sc0000012-1510915933:11514..11642Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1575043694:11514..11642TCONS_00001758-exon-sc0000012-1575043694:11514..11642Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1491911889:11940..12099TCONS_00001758-exon-sc0000012-1491911889:11940..12099Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1510915933:11940..12099TCONS_00001758-exon-sc0000012-1510915933:11940..12099Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1575043694:11940..12099TCONS_00001758-exon-sc0000012-1575043694:11940..12099Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1491911889:12423..12540TCONS_00001758-exon-sc0000012-1491911889:12423..12540Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1510915933:12423..12540TCONS_00001758-exon-sc0000012-1510915933:12423..12540Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1575043694:12423..12540TCONS_00001758-exon-sc0000012-1575043694:12423..12540Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1491911889:13053..13223TCONS_00001758-exon-sc0000012-1491911889:13053..13223Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1510915933:13053..13223TCONS_00001758-exon-sc0000012-1510915933:13053..13223Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1575043694:13053..13223TCONS_00001758-exon-sc0000012-1575043694:13053..13223Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1491911889:13496..13659TCONS_00001758-exon-sc0000012-1491911889:13496..13659Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1510915933:13496..13659TCONS_00001758-exon-sc0000012-1510915933:13496..13659Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1575043694:13496..13659TCONS_00001758-exon-sc0000012-1575043694:13496..13659Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1491911889:13882..14023TCONS_00001758-exon-sc0000012-1491911889:13882..14023Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1510915933:13882..14023TCONS_00001758-exon-sc0000012-1510915933:13882..14023Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1575043694:13882..14023TCONS_00001758-exon-sc0000012-1575043694:13882..14023Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1491911889:14300..15166TCONS_00001758-exon-sc0000012-1491911889:14300..15166Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1510915933:14300..15166TCONS_00001758-exon-sc0000012-1510915933:14300..15166Clytia hemisphaericaexon
TCONS_00001758-exon-sc0000012-1575043694:14300..15166TCONS_00001758-exon-sc0000012-1575043694:14300..15166Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:4757..15166 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
58.8547	60.8228	46.2604	36.9628	183.472	136.649	63.0251	63.673	41.9934	46.2002	31.4903	28.4245	14.7911	12.5886	29.6245	33.6937	67.4296	54.3111	8.93356	7.5105	25.0386	23.7254	73.9013	65.6614	60.1114	48.9368	20.5927	10.7093	40.0837	37.8256
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR017441Protein_kinase_ATP_BS
IPR008271Ser/Thr_kinase_AS
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Blast
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BLAST of TCONS_00001758 vs. Swiss-Prot (Human)
Match: CDK1 (Cyclin-dependent kinase 1 OS=Homo sapiens GN=CDK1 PE=1 SV=3)

HSP 1 Score: 399.823 bits (1026), Expect = 1.035e-127
Identity = 185/292 (63.36%), Postives = 232/292 (79.45%), Query Frame = 1 
Query: 2416 LNEYKRIEKIGEGTYGIVYKAKHTPTGELVALKKIRLETDDEGCPSTAIREISILKELRKYPFIVQLQDVIHSESKLYLVFEFLLMDLKKYIDTVQGP--IDQALIKSYTYQICAALEFCHARRIIHRDLKPQNLLIDSKGLIKIADFGLGRSFGVPIRAFTHEVVTLWYRCPEVLLGMKRYSCGIDTWSIGCIFAEMVTKKPIFQGDSEIDEIFKIFQILGTPSNAEWEGVEELPDYKNAFPKWKPKNLKDLLPDMEPAGIDLLQKFLIYQPASRMSARKALKHPYFFDFD 3285
            + +Y +IEKIGEGTYG+VYK +H  TG++VA+KKIRLE+++EG PSTAIREIS+LKELR +P IV LQDV+  +S+LYL+FEFL MDLKKY+D++     +D +L+KSY YQI   + FCH+RR++HRDLKPQNLLID KG IK+ADFGL R+FG+PIR +THEVVTLWYR PEVLLG  RYS  +D WSIG IFAE+ TKKP+F GDSEID++F+IF+ LGTP+N  W  VE L DYKN FPKWKP +L   + +++  G+DLL K LIY PA R+S + AL HPYF D D
Sbjct:    1 MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELR-HPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLD 291
The following BLAST results are available for this feature:
BLAST of TCONS_00001758 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDK11.035e-12763.36Cyclin-dependent kinase 1 OS=Homo sapiens GN=CDK1 ... [more]
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