Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

XLOC_000943 (gene) - C. hemisphaerica

Overview
NameXLOC_000943
Unique NameXLOC_000943
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:4757..15166+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000943 ID=XLOC_000943|Name=XLOC_000943|organism=Clytia hemisphaerica|type=gene|length=10410bp|location=Sequence derived from alignment at sc0000012:4757..15166+ (Clytia hemisphaerica)
ttttATCAGCTGAAATTGATAGAAAGGTTTAAACTGTTTTTCTTTGCTTA GTGGTCAGAGAGGAGTATTATTATTGTCTGTCTCTAAAGAAGGGTGTCAG AATTAGATGAGGGATGTTGATATTAGACCAGACGGTACTGAACGATAAAT TTGATTGTCGAAGTAATCAATAATGATGGAAGTAATCAAACAACCACTTA TCGATTAACAATCGAATGTCAAGTACCAAAATTTCAGAAAAATTGTGAGT ATTCGATCACTTTCTTAACAACCCTTCAAAGACTCCATAACCGTCCGAGT ACTTTGATTGTTATTGATTACTTTCGATAACTTTGACAACTTTGCTAACC AATTGATTACTTTGACGATAACCAATTACCGTCAACTGCTCTAACTTGGG ACTATCTGACAAAAAATGGGACGGCAATCCGGCCACCATTTCACCGAACC TCCAAAGTCATTTGATTTGAGTTAATAAATGGCATATATATAAAAAAATA AAAGATTTCTCTTTTGCACCGAGTAGGCTTTTAAATCGAAATATGAAAAA ATCCATAGTGGAACACACGCAAATGTCTGGAACGAAGAAGACCATATTAG TGGCAAAACGATGGAGCGTTTAACGTCACTCCCGCTGCAAGTTACACACT CGTTATTTGTTAACCCCATCAGGCACTAGACGGTTAGGCGTTCTGTAATT CTCCAAACGACGTCCCGTCATTTGGAATGAAAACAAAAAGTTACAAAGGA CACACTATCAGTGAAAGTTAGTATGGTGACATGTTAATAAACTTGGTAGA ATTATCAAAACGAATTTGTTGTCAAAGACATTTAACAGTAAGTGAAAATA CAGGCCAGATATCAAACAGTCCCACCATGTTTCGACCAATCATCCCAAGT TAGAGCAGTTGATGGTATTATGATATATCTTTAAGAAAAACTAAAAAAAC TGATCTAAAACCAAAGCACAAAAAGAAGCCCCTCCATAAAGATTGACCCC CTTATTTCCCAGCCATTTTCCCTTGCCATTTTGTGTGGCCTTCGCCCTGG GTTTCCTCAAGTGCTACTGGAAACATATTTGATAAAATTGAAGGCTGGAA ATTACTGAGTACAATCGAAGGTATTCAATATGATTGAAGGTAATCGAAAT GATTGAACAAATCGAAAATGGTCGAAGAAAATGCCATAATCTGGAGTCGA GTGAGGCCAAGCCCAATTGATAGTTTGGTTCGTGTCCTCCGACCGACTCT AAATTTTTGAGAAAAAGTGTTTCACTTTGAGTTGGAAAAATCAAAACAAA TTTACCTCCTTTTCACATGATAACTACTATCTCTGCAGTTCTTTTCTAAC TGACTGCTTTGATTCTTCTATAAACAACATCCAATTTGCGCACAGAAAAT GTCCCGGTGTAGCAGAAACTCACAGCTGTATTCCTTTAAGCACACGCCGC AAACGCCTTTATTTCCAACTAGAACCTATCTTGCGATCGCGTCGAGTGCC GTTGTGGATCCGGGCTTTTGACTATTTTTTTACACTCGCGTTTGGATTCC AGGATTGCACGATTGTTTGAGGAATTTCAAAAATAGAGGTTTTTGGTGGG AAAATGAAAAAAAGGTTCCAATTTTAGCTACCGACCGACCGACCCATTTT TCAGAGCTTCTAGGACACGAACCAAACAATCAATTGGGCCTGGCCTGAGT ATTCAATCACCGATAAAATTGGATAGGGGGTGTCACTGACCACCTTCGAT TATTATCGATCATTATTGATTACTTCCTTCACAATCGAACGTTCAATTAG TACCGTAAGTTGGTCTAATATCGACCCAATAAAGACGACCCTAGGTATAG CACCAACTTTTTCAGGCCACTCGCATGTTTTGAAATTGTTTTTATCCCAA AAAAAAAGAATTAAAAAAAGGTTACAAAACTTTACCTCCTGTAACTAAGA AATACGACAACAAAACGCATGAAAAAACAAACATTGCAGATGGAGCTTTG ATCCATGTTGGCTTCTTAATCTTCAAATTTGGTGGCTCCAAAAATTGGAA AGGTAATGTGAAAAAGAATTCCATTTTTGTGAACCTTCCACCAAACTTTT GCCTTCGGATTGACGTGTTGACGTGATTGAGTCCCTGTAGCTACTGCACG AATTTGGTTCGAAAACGAGGCTTGTTATCTAACTTCTGATTGGCTTAGAC TTCGGCCGCTTCAAATTGATTGGTCAAAGGTCTCAAAAGCGGCGAATCTG AACTTCTTGAATATCGAAAGGCCATCATTTTGAAAAGAGACTCAAAGTGT GAACATCTCCAAACCGTCAAATGGTATGAGTGTTTTCTGTAGACAGTTCA TGTTTGTTTGTCGATAAAGTCTGTTTGATTCGCCCCTCTGCTCATGTATA TCCACAGTGACCCAATACTATGCATAATCTGCTTCTTCTGAGTTTAAATC TCGTAGAGTTTATTCACTAAAAAAGTCCATCTGCCTGAACAGGAAAGGAC TTCGGTGTTTGTTTGTAAACTCTGGCGATTCCAACATCAGTCTAAATCTT TCTGTGTTCAGGGATTTGAATTAATACCTTTTCTTGAAGCCTACATATGA CCCAGTTTGCAAAGTGTGGCACATTTGCTTGNTTGTTTGTAAACTCTGGC AATTCCAACATCAGTCTAAATCTTTCTGTGTTCAGGGATTTGAATTAATA CCTTTTCTTGAAGCCTACATATGACCCAGTTTGCAAAGTGTGGCACATTT GCTTGAGATATTGAGTGCACAACTTGTAAAAAATCGAGTGCAGGTGCAAA ATATATCTAAGGTTTTCAGGTGTAGTGTTCAGCTATCTTTTCCTCTAGTG CAGccaatttgagcaattttttgcctttttgggcaaatttccgAGCTATA GATGCACCTTGTCCGGATTTATATCAGGTGCGTTCTTCGAGTGCGGAACG AATTTTTCTTCGAGTGCAGCCTTcttgccatactctgcaaactggcaTAT GACTGATAACTAaaagaatgtttttatttgCATGCGACACAGACTCTACT CTTTTTAAAACCTTACCTAAATTAAGCAGTAGTGATAATTGACACACTTT TCAAGAAGGGAAGGGAGGTCTGTTTTTAAAGATTTCCTAGGGGCTACCAT GCTATATTTATTAGACAGCGTGGTATAGTGTAGTCATTGagcttggttgc tgcacagacGACTGAGGTTTGATttccactcgcagcggttcacttgacaa gtgaatgaaccttcgcccaggtcaacccatgccatgctATGtgccagacc cccgcgctcgataggatcgatcatcggaacggctcgatgacggatcgata tgtgatcgatggattacttatcgatccggataggagatcgatagaggatc gataccgtaacttggtctaatgtcgacatccctcctctaaattcgacacc cttttctagagctgaaaaattaaaaaaaggtcgaaattattttatttgct tagtggtaagggaggataaatcttttttcaatcaccgaTTCCGACTTTCA TACtattcctatctttaaagaagggtgtcgaaattagaagacggatgtcg agattagaccaacttacggtactcaagatttttttaagcttatgattatt tatcgatctatcatcgatctatcatcgatcttttatcgatcttatcgacc ctaacAACTctatcgagtatatcgattcgtcatcaatGCATAATCGATGa tgaatcgattaacgatcgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTT Ccctcgatctcctatccggatcgataagtaatccatcgatcacatatcga tccgtcatcgagccgttccgatgatcgatcctatcgagcgcgggggtctg gtatGTGAGAGGAATTGGGTAGTCGGACGGCGCGCTCATTGAAAGTGTCT ATATTTgcaaaaataggcctcaaagcctcctgcaactcaaccaaatagaa atagaaatattctAGAAAGGCCAACGTCAAAAAAGGCCATTTTTCTGTCC ATAAAATCAGCTATTCCAAACCAAAGTTTCATTGATTCAAATCGGCACAA GAAGAGACAGCATCTCTGATAAACCAACTTAGCAGGATGCCCTTCTTTAA GAGGTAGTattcaactttataagaaaggCTTTTTATGACATTAAACATGA TCATTTCTGCTATTTTGGTATTCTCCAAATGGTAATGGTTTTTGAAATag cccatttttctaagaaaatagCAGAAAGAATATGTTTTAGTAACACCTTG CTTAGCTCCAAAGCTTTTTGTGTTCCTGTTTGAACCTGCGCATAATTTCc tgtttgttttcatttcatGGATGAAAATCATTCAGCCTTGCTTAATTTAC ACACTTTTGTTTTGACACATCTCAGTCTGGGATGGGAAATCCTCTTAATT GCGGCTTAACTTTGATTATTATTAGCTATcatagaatttagaaaatagcT AGAATTTTTTAAGGGTGCAATTACATACTTATCACTATTTGAATGGGTGT TAAAGCATGTAATTTCATCCTGAACTAGTCTATCATTTAAAAAGACTTGA TTAGCTCCCGACCGCTTCATTGAAATCAGAAAGTCTTGGACTATCTTACT AAAAAATTTTGAGGCCCGCAATCTTCGAGTTagcaatttcaattttgact cTGGTTGAGTTCTTAGCTGACTGGttttatgtaaaaaatcaaattcaagt TAATTCTTTCTAGCTCGAAAatccatttttgaaaattaaaaatcaagtta gattcacgtgacgtcataatttgcacttttatgacgtcataatttagctg ACTCGAAGATTCCAGGCCTGAAAATTTATCCTACAAAACAATCATGTTAA AGCTTTAGCTCATTTGACCATGTATTaacccaatttttttaaatcggaAC CCTCTAATCTGTtcaagcaatttcaaccggggcaggatcataagcgtgca attgcacatGGGCATAAATTTTAACTGTGTAATTGCGGGCTTACAGCCTT GGGAGTCAAGTGTGTAATTAAGAGGTTTACAACAATACAACATATCTAAA TTCTTTACAGCTCACTAAGTCAGTTTTATCACAAAACATTTCTAAGAGGC TTCTTGTCTTGTTGAGCCTCCAAGCAAATATTTGGCTTATGTCTATAGAG TGGAAAATACATCGTGTATTTATAAAAACACATTGTGAAAACTAAAAGAT TGTCTATTCGATCCCTAGGCCTTCACAAAAGAAAGTTTTCTGTTACAGTA GTCATGCCAAGAatgggatcagacccctttccgcactattcCCTGCCTCT GAAAATTACCTTGCTCCATCTAAGCATAAAAAGTTGTAATTTGACGAATT TTTAACGATTATCATTTTCCCTaaggtagttctaattcaagaataaaTGG AAGGGATTTAAGTAAACTGTATGTAATATTGCtggttgaaataaatgaaa gaaaaactaaGCATATCTATACACCCAAAATGACATTGTGATATTTGcga tgttagcttttttaggcttatgcaAATTAATGGATAGAAATAGACATGGA ATACACCTCCCTGAGCTTAGGGGGGCTAAACCATTTGCatttttccattt atttttcaaaaaatactgggggTCAGCTTGCTAGGGGGGCTGAGTGTGTG TAATAGAATTGggggcagagctgataggttcaagatattttaaattatgt taaaaatctatgctgcggggaaggttttatccctcttgaaaaaaaatttc tttgatattttgttttgtgaagGTGGGGGGGTATGTTTCTAGAATTCAGC TTGGGCTATTTTCCTTTGCCCtctgaaaaatgctgggggctggacccctc tgcacactatgttaAATGGTGAATACCACTAAAATAATAACCATATTCTT GATCCATCACAACATCTCATAAAACCAGTTTTTTTCAATGTTGATATGGT TTTGGTGAGTCCCCCAATGTCTACAATCAAATTATTCCATCCCgctcatt tttccccaccctggcttcaaaaaaCTCCCCCTCCCCCCTCGTAAGTCCCT TTGGTTTCAAAACCCATTCCCTGGAATCCAGGGGGAGAACGTTATAATGT CTGTTAAAAAATTTGGTCCTTTGCTCATAACTTGCAAGATAATTACCAAT CATGCCTACAATGGTTTTTCATCCACTCCTACAAAAATGTGTTTTTGAAG TATGAAAAGTGACTTTAAATGCAATATTTGCACAGGCGATAGAATCAGAT AGAATAACAGCTtaaaaatttcccaaatttcTTGATTctggaaaatattt atttgatttctGTTGCTTTTTATTATTCTGGAAACTGAGTCAAATACTCA AAAATAGATACTTTACTCTCTGATTTttgtttaattatttttaacacTTC TAATGTTTTCATGTCTTGCTAAAAATGGGTCTAGTAATTTTATACATTAG GACTAAGCTAGAGAACTTCTGTTATTGTCAAAAAATtactttactttcat tttctagACTCAAATAATACTTCATTCACCCACCTTCCATTTTCACTAAC CTTCCACATACATTTTTTCACAATGAGTACCAAAGAAGATAGTCAACGTT TAAATGAATacaaaagaatagaaaaaattggTGAAGGTAAGCTCTCCTTG ACAGAACTATATATTCAAAGCAATTCACTAGTCTCTTAAACTTGAATccc ttaaaaaaatttgaacaaataaaTTTATTGGTTTTGCTTTATTTTGTAAT GAACCTTTCCACCTCAAACTCCAGAACTCAAATTTTACTCAAAAGGTTTT CTTGCTCCTTAACAGAATATCAATGCAGTAACTGGAATTCTCCTTAGATA GAACAATTCATTTTTATCATCCTCAAGTGATGAAACCTGATTGTTAACAT TTGActtatataaatataaatattattttataGGCACCTACGGTATTGTT TACAAAGCTAAACACACCCCAACTGGGGAATTGGTTGCTTTAAAGAAGAT TCGTCTGGAAACTGATGACGAAGGGTGCCCATCCACCGCTATTAGGGAAA TTTCGATTCTCAAAGAATTAAGGAAATATCCTTTTATTGTCCAGTAAGTT ATTACTGACTACATTAGTATTTACTAGTCTATCTATGGACTATATTTTAC ACTTTTGAAAAGAAGTGACCAAGCCCTCCCAAAAAATGTATGATGGGCAG CAGAGAAGGAAATACAATTAAAAAGCAAGCATCTTTTAGAAGTAGAGTTA CTGCACACTGATTAAGGTGTCCATTTCTCCTGTAATAAGCTTTGCCATAt tttaaatttatgcaaaccGCTTTGAAGTGTTTTTGTGCTAATTCAATTAC AGGtctctgttaattaatcattgAGGTAGGTTTTGATTGTCAGATTGGTC TCTTTTTTTGTAATAGACTCCAAGATGTTATTCACAGTGAATCAAAGTTG TATTTGGTTTTCGAATTCTTGTTGATGGACTTGAAGAAATACATTGATAC AGTCCAAGGACCCATTGACCAAGCCTTAATCAAAGTAAGTCAATGCTCAA GTTAAGTCAGACCAACCTTTGAAACCTTGACAAGGAATGTTTTCCGACCC CAACAAAAAAACTCCAGAAATTTACTTTCCTAATTCAGCTTTCCTTGAAC AGAAAAAACCTTGTATTTTAGCAACTGAGATACATAACTTCCACCAAATG ATGGGGGTCAACTATGAAGTCCCTGAGGTCAAACATTTACATGGCATTGA ATAGACCATATCGGCTTtccaaattctccccgaatgatttcccatgatgc attgcgcaaaaaattcacggaaagtcaatatcgtctgtgaatttttttgc gcaatgcatcatgggtaatcattcggggagaattcggaaagccgatatcg tctattgtaaTAAGAAATACAGTCATCTCTATGAAAGTTTTAGCCATGTT AATGAAGAGGAAACCAGGCTTATTTTATGCTGCCTATCAATAACTTCTTT TGAGCTAGAATAAATCCAATTGATTTACTAATACATTGTATTTTAGAGTT ACACATATCAAATTTGTGCTGCTCTGGAATTTTGTCATGCAAGGAGGATC ATCCATCGTGATTTGAAGCCACAGAATCTTCTAATTGATTCCAAAGGATT GATCAAGATTGCTGATTTTGGTCTTGGGAGATCTTTTGGTGTTCCTATCA GGGCATTTACTCACGAGGTTTGTCCCTATCTGAGTAGACATAATATACTT TAAGTACTAATCTTTTAGAGCCTTTTAAAAGGGTCACACttaaaaactga aagaaaacatCTATGCTTGAGGAAACGTATAGTTATGATGAAGTTTAAGT TAAGCATTGATAGATTGCCTCATTAAATTCTTGATTAGTTGTATAGGTGT AAGAAGTTAGCTTGATTGAGAGATATAGAAATCATTACATTGAAATTTAC TGATAGAATAGACTTTGATTTTCTTGTCTTTCTCCTCAGGTTGTAACGTT ATGGTACAGGTGTCCAGAAGTTTTGCTGGGTATGAAGAGATATTCATGCG GTATTGACACTTGGAGTATTGGATGTATTTTCGCTGAAATGGTCACCAAG AAACCCATCTTCCAAGGAGATTCTGAAATTGATGAAATCTTCAAGATATT CCAGTAAGCAAGCAATATAAATGCTAAAAACATCTTTTGATTCCAATTTC AAAAACCCAAAATCATTTATTTTGTCCTGTAAATAAAATTTATAGTTCAA TATCTCCATGTtggctcaaaaacattttatggTAATCTAACCTGAGCACT TTGCTCCAACACCTACACAAGTAACAAGTAACTAATCAATACTCAAAAAc ggtgttttattttttatctccACAGAATTTTGGGTACACCAAGTAATGCT GAGTGGGAAGGTGTTGAAGAATTACCCGATTACAAGAATGCATTCCCCAA ATGGAAACCAAAGAATTTAAAAGACCTTCTACCTGATATGGAGCCTGCAG GAATCGACCTACTTCAGGTAAGAAGTTTGAGCAGCATGGTTGCttatgtt tgaaaaaaatttcacaaaataaattctatAATTTGAACCCAGTCTCAATC TCTGTGGGAGGTCAAACGTATGCAAAAAACGTGCCAACAAACCTCTTCGG CTCTTTCATAACAACCAAAGTTGAAACTGTTAACGTTTCTTGAGAAATTG ATAAATGTTTTGAAGAATGacgaaagaaaaagaatttcttCCCTCCTCCT TTCTTGCATTAACGTAATAACTCAAAgttctttcttcttttagaaaTTCC TGATTTACCAGCCAGCATCGAGAATGTCAGCAAGGAAAGCATTAAAGCAC CCATACTTTTTCGACTTTGATCCTTCCACATTGCCACAACCTCCAGAAGA TATCCTGTAAGTGGTGTAATACATCAGAATACTTTAAAATGGTGTCAATC GCACAACCAAAATGTAtcttttcaaatagttttacatGAAGCGATGGTAA TGTAGTCATGTCGAGATGACGACCCAATCTAGCGTTCTATGAGAGAAAGA GAAGGAAAGGAGATCAGGCATCAATAAAAACACTGTAtatatgaaataaa ttaaatttgacaaaCAATATTCACACTTGCATGTATCATAAATGTAAAca ttttcttgttttatttttcatggaaattgaTGCGAAAATCATTACTATAA TTACTAATGACATTTATATCAAGTGCTCTATTTTTGTTCCGAATTATtat attttggatttttttttaaattgagatAATGAAATTGAGATCCTATGATG ATATTgaataagatttaataattcTTCAACCTCTTGCCCTTCTTTTTGCG ATGAacaaaaagttaattttggTAATGGTAACCTTTTTAACGGGCCGACT TTTATCAcagattttttatgaaattttaaattcataCTTATATTCTCACG GTACTAAATGTAATTAACtgactttattttttataataggATATAAAGAA AGTACTTAAAACGTAATTTgtccgacgaaaaaaaattcatttataATTGT TTTTGCAAATGTAACTTACTTTGATCacataaaatttcgcgggtGTTAAA TTTtgagtcccaatggaaatttggaaaggccttGTATGGAGTCTTGTGCG GGAATGGGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001758TCONS_00001758Clytia hemisphaericatranscript
TCONS_00001759TCONS_00001759Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001758-proteinTCONS_00001758-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:4757..15166 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CDK1PREDICTED: cyclin-dependent kinase 1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
62.39 62.28 46.26 41.87 213.48 162.8 69.29 65.25 42.79 46.2 31.73 28.65 14.79 12.59 29.62 33.69 77.31 57.01 8.93 7.51 26.31 23.79 88.18 67.32 60.11 49.39 21.1 11.47 42.38 41.13