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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001740 ID=TCONS_00001740|Name=TCONS_00001740|organism=Clytia hemisphaerica|type=transcript|length=2653bp
GGCAAAAATTAATTGTCGTCGTTGTTGCAGCCAACATTGTTAGCATAGAT
TGCACCCCCCCTGATTCTGATCAAGTTCAAATCAACAACAAGATTAATCA
TTGCCAATGATAATATGTGATCctccaagcgattttaagtaaataaaaat
ctTTCCGGCAAACATCAGAAAATGATCCGCCACATTGCCGGCAATATTCG
ATAATCGTCCGCTCACTAATAGAATTAAACCCGGCAATTTATCGGTTCAC
GAAATCAAGCAATTTTTTTCCTTCTCAAACCTATAGACGGAAACTTTCCG
GTTACCAGCCGTGAACGTCTATTTTTTGAAGGCAATTTGCCGACAATTTG
CCGGCCTTATGGATGCCGGCAGACgaagaataaaaacattctaGCATTAT
GTAATCAATATACGGTATATCACGGAACGAAAGCTGCTTGCGAATTCTTA
TAATTCCGGCTGTTCTGTGAAGTATTTTTATTATACACGAGGTTTCTCTC
GGATCAGATTCTTTCTTTACCATTTCAACTGGAGAGAAGAAACATGTTCA
TTCAATCAACAAAAGTATGAACAGAAAGTAAAAACTTCAACTTCTTGAAC
AGATAGACACACACCTTCCACAAACTTTGCTCAGAGCTTTCTTGACAGTG
AATATATTAATTTTCTGCTGAACTTGAGTGAAGAAGAGTCAAAGGAGGTA
TGTAGTTTGACTTGGGACTATTATACTGTCCAGGGTTTCGGTAGCGTGGG
AAGATCTATCCCACGTCACAGAAATCCTGCAAGCAGACGGGTAATCTATA
TCAATCTAATTACCAGTAGTAGATTTGTTATAAAAGTCAGTGCTGCTTAA
GGAAGAGCTGAGAAAGGTTTCTTGGAGCAGATTGGGCTGCTTGACAATGA
ATAGAGAGGGATTGCTTGAGCATAGAAGGTGTAATCAGAAcaatgttttg
aagaaaagaagatgAGATTGAGATGGGCTTTGAACATAGGTGTCATGGAA
ATGTCAGACGTGTATGCTAAATAAATCATAACATGGGGCTGTgggccATA
GAACAAACTTTGAAAAGATGAAGATCCTATTTTTGTGTTGGAGTGGAGAC
AAAGTCATGTGGCTGTCTAGGCTTTTTGAATGGCCGTAATGGAATAGAGT
TGTAGACAGTTGTCTAGGTGAGAAGAAGAGGAAGCATTTAGGACTCCCCC
TAGAGTTAGGTGTGCCGGCAGGAGTAAACACCCTTTGCTTTTCTAGAACC
ACCCATCTTCTCTACCAAGAGACATGAAGTCGATCAGGTGTCATGTCTCT
TCAACTTATACCTGTAGACGTGGAACATGACATGACATATCAGTGGAAGG
ATTCAAAGACTGTTATGTGCCTGAGTGAAGCCTCCAGAGGAGAGTGAGAA
GAttgagagaaagaaaaaaagatgttgaaagAAATATGTATTTTGAAAGC
AGCAGGGAAGATTAGATGGTGGGTAAATGAACATAGAAATATTCTTACAT
TAAGGTGAAGTTTTGGTGTCTGTTGTTGTGAGTAAGGTTCCGATGGTGGT
GTTATTTTTGTATACTGTGGTCGGTCATGGGATGGCATTTGACAATTCCT
CATCTTCTTCTATGATGGACCAATATTCATTAATGGTAGATCTGATGTAC
TCATCTTTGTTTCTGTATAGAATGAGAGGGAGAAGGGGTGGTCGAGGTCC
TTGATTTCGGTTGCCACCATAGAGCAAAGTGTGATGGGGTATTGACAGGG
CCTTTGCAATTTTGCGGTTAATGAGGGATAGTGGGTATCCACGAGCCAGA
AAAACTTTGGTAAGGAAACTCAGTTCTTTTGTTAGATTACGGTCATCGCT
GATTATGAGGTTGTATCGTAGTCCTTGTGAGTATATAATTCCTTCTTTGA
CATGTAGGGGGTGATTTGATTGAAAGTGAAGGAATTGAGAGCGGTCCGTG
GGTTTTCAAGATATGTTGTGGTGTTATAAAGTGTGAAATGTTAAATCGTG
ATATTGATGATAAGACTATTATAACGCAAATTATTAACAAATTTGTTGGT
AATaataaaaacttgtaaaaaaaaaacatttgtagGAAACCATTTGTGAA
TAGAGTTTATCATTGTTGAGTTTTAGGTGTGTCGTTCAGGTAGCAATGGG
ATTGGCGGTGTACGTCATACACGTCATGATAGTACCAAGTATGTCCTTTT
ACAGATGGGTTGTTAGAGACCCAGCAGAATTGGTCAAAAcgtttttttac
tttattttcattGAGTTGCGACGAATAGATAACGTGTGCAGCTAGCTCCG
GTGCACAGCCGTTTCCAAAGAAAAAGATAATTAGTTGGAACGCCTGTCTA
TCACTGTTGGGTTGAGCTCTCAAAGCTCTTTTTATATGCTGTGGCCTTGT
GTCTATTGGGAAGAAGGCGTCTCCATCTATTGTGTTAACAATTGACTGTC
TGTGTTGGCGTGAGAATGATCTTTGGATATAttggtttttggacctaccc
cggtggggtggaggtcctataaattcacctctgtccgtccgtccgttcgt
tcgttaccagcttttctcgagattgaaccATAAGGAATCttctgattttt
ggtacaaaggtgcaaaatggtggcggccaaaatgtgacggagcctgattt
tcg Run BLAST on NCBI transcript from alignment at sc0000011:713445..716097 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001740 ID=TCONS_00001740|Name=TCONS_00001740|organism=Clytia hemisphaerica|type=transcript|length=2653bp|location=Sequence derived from alignment at sc0000011:713445..716097 (Clytia hemisphaerica)
cgaaaatcaggctccgtcacattttggccgccaccattttgcacctttgt
accaaaaatcagaaGATTCCTTATggttcaatctcgagaaaagctggtaa
cgaacgaacggacggacggacagaggtgaatttataggacctccacccca
ccggggtaggtccaaaaaccaaTATATCCAAAGATCATTCTCACGCCAAC
ACAGACAGTCAATTGTTAACACAATAGATGGAGACGCCTTCTTCCCAATA
GACACAAGGCCACAGCATATAAAAAGAGCTTTGAGAGCTCAACCCAACAG
TGATAGACAGGCGTTCCAACTAATTATCTTTTTCTTTGGAAACGGCTGTG
CACCGGAGCTAGCTGCACACGTTATCTATTCGTCGCAACTCaatgaaaat
aaagtaaaaaaacgTTTTGACCAATTCTGCTGGGTCTCTAACAACCCATC
TGTAAAAGGACATACTTGGTACTATCATGACGTGTATGACGTACACCGCC
AATCCCATTGCTACCTGAACGACACACCTAAAACTCAACAATGATAAACT
CTATTCACAAATGGTTTCctacaaatgttttttttttacaagtttttatt
ATTACCAACAAATTTGTTAATAATTTGCGTTATAATAGTCTTATCATCAA
TATCACGATTTAACATTTCACACTTTATAACACCACAACATATCTTGAAA
ACCCACGGACCGCTCTCAATTCCTTCACTTTCAATCAAATCACCCCCTAC
ATGTCAAAGAAGGAATTATATACTCACAAGGACTACGATACAACCTCATA
ATCAGCGATGACCGTAATCTAACAAAAGAACTGAGTTTCCTTACCAAAGT
TTTTCTGGCTCGTGGATACCCACTATCCCTCATTAACCGCAAAATTGCAA
AGGCCCTGTCAATACCCCATCACACTTTGCTCTATGGTGGCAACCGAAAT
CAAGGACCTCGACCACCCCTTCTCCCTCTCATTCTATACAGAAACAAAGA
TGAGTACATCAGATCTACCATTAATGAATATTGGTCCATCATAGAAGAAG
ATGAGGAATTGTCAAATGCCATCCCATGACCGACCACAGTATACAAAAAT
AACACCACCATCGGAACCTTACTCACAACAACAGACACCAAAACTTCACC
TTAATGTAAGAATATTTCTATGTTCATTTACCCACCATCTAATCTTCCCT
GCTGCTTTCAAAATACATATTTctttcaacatctttttttctttctctca
aTCTTCTCACTCTCCTCTGGAGGCTTCACTCAGGCACATAACAGTCTTTG
AATCCTTCCACTGATATGTCATGTCATGTTCCACGTCTACAGGTATAAGT
TGAAGAGACATGACACCTGATCGACTTCATGTCTCTTGGTAGAGAAGATG
GGTGGTTCTAGAAAAGCAAAGGGTGTTTACTCCTGCCGGCACACCTAACT
CTAGGGGGAGTCCTAAATGCTTCCTCTTCTTCTCACCTAGACAACTGTCT
ACAACTCTATTCCATTACGGCCATTCAAAAAGCCTAGACAGCCACATGAC
TTTGTCTCCACTCCAACACAAAAATAGGATCTTCATCTTTTCAAAGTTTG
TTCTATggcccACAGCCCCATGTTATGATTTATTTAGCATACACGTCTGA
CATTTCCATGACACCTATGTTCAAAGCCCATCTCAATCTcatcttctttt
cttcaaaacattgTTCTGATTACACCTTCTATGCTCAAGCAATCCCTCTC
TATTCATTGTCAAGCAGCCCAATCTGCTCCAAGAAACCTTTCTCAGCTCT
TCCTTAAGCAGCACTGACTTTTATAACAAATCTACTACTGGTAATTAGAT
TGATATAGATTACCCGTCTGCTTGCAGGATTTCTGTGACGTGGGATAGAT
CTTCCCACGCTACCGAAACCCTGGACAGTATAATAGTCCCAAGTCAAACT
ACATACCTCCTTTGACTCTTCTTCACTCAAGTTCAGCAGAAAATTAATAT
ATTCACTGTCAAGAAAGCTCTGAGCAAAGTTTGTGGAAGGTGTGTGTCTA
TCTGTTCAAGAAGTTGAAGTTTTTACTTTCTGTTCATACTTTTGTTGATT
GAATGAACATGTTTCTTCTCTCCAGTTGAAATGGTAAAGAAAGAATCTGA
TCCGAGAGAAACCTCGTGTATAATAAAAATACTTCACAGAACAGCCGGAA
TTATAAGAATTCGCAAGCAGCTTTCGTTCCGTGATATACCGTATATTGAT
TACATAATGCtagaatgtttttattcttcGTCTGCCGGCATCCATAAGGC
CGGCAAATTGTCGGCAAATTGCCTTCAAAAAATAGACGTTCACGGCTGGT
AACCGGAAAGTTTCCGTCTATAGGTTTGAGAAGGAAAAAAATTGCTTGAT
TTCGTGAACCGATAAATTGCCGGGTTTAATTCTATTAGTGAGCGGACGAT
TATCGAATATTGCCGGCAATGTGGCGGATCATTTTCTGATGTTTGCCGGA
AagatttttatttacttaaaatcgcttggagGATCACATATTATCATTGG
CAATGATTAATCTTGTTGTTGATTTGAACTTGATCAGAATCAGGGGGGGT
GCAATCTATGCTAACAATGTTGGCTGCAACAACGACGACAATTAATTTTT
GCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001740-exon-sc0000011-1491911889:713445..716097 | TCONS_00001740-exon-sc0000011-1491911889:713445..716097 | Clytia hemisphaerica | exon |
| TCONS_00001740-exon-sc0000011-1510915933:713445..716097 | TCONS_00001740-exon-sc0000011-1510915933:713445..716097 | Clytia hemisphaerica | exon |
| TCONS_00001740-exon-sc0000011-1575043694:713445..716097 | TCONS_00001740-exon-sc0000011-1575043694:713445..716097 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011 | supercontig | sc0000011:713445..716097 . |
Blast
The following BLAST results are available for this feature:
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