TCONS_00001683 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001683
Unique NameTCONS_00001683
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2551

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001683 ID=TCONS_00001683|Name=TCONS_00001683|organism=Clytia hemisphaerica|type=transcript|length=2551bp
ATTTTATTGTTGGAAAAGGAAAGAGAAAAAAGGTTTGAAATCAGTATggt
aaaatcaataaaaattataaatcttGAGCCTGGAGGGACATTGTTTCCTG
TAGAGGAGGCACAAACACTTGATAGCCTCTCTAAAATACTTGAACAACTT
TTTCAAATCCCAAAGGAGATTCATGTTTTCTATGTTGGGTTTGTAAAGCT
TGACAATGATTCTTATGTCAAGTTGATAACAGATGGAAAATCAAACTATT
ACCAGCtccaattttttgtaaaaggaaCCCCTGATAGTGATGTTGTTCAT
CATTGTAATGTTATTGGACTGAATAAAGAACTCCGAAGAATAATTATCAG
AGATCGTAGTGGCAAAGAAGTCCTGTCATATAAGCCAAATTTGAACTCAA
TTGTTTATGACCTTAAAGAAGCTGTCTACCTAAAAACCAAAATGGACCCT
CGAAATCAGGTACTTGCCATTAAAAATGAACATGGAAAAGAGGGTGTTCT
TGTTGATAATTGGGCATTTCTGACtgatttatattttgaaaatgcttTAA
TGAAAACAGTtattaatttgaaaataatggttGACTCTACAACCCTTAGA
GATGAAGATCCTCATAActgttttcattttgatttaccGTTCTTATCACT
GGTAAATATCAACATACCAGGTATTGTTGGCAATAGATCCATAACGTACC
CTTTATTGGAAAGGGGAGATTTTAGCGTTCTTTCTTTAAAAGAATGGATT
GAAGAAAACCATGGAATTCCAAAGTTTGATCAGCTCCTCCTGCATGATTT
CCAGATTTTGGATGACAATCGCCAAATATATAAATTCTTTCCACCACGGC
GCTCTTTTGATCCATTTGAGATACAGGTTTTTGTCTATGCTACTCGGGAT
GAAAAGTTGCAAAATGTTTATGCTGAAAACAACATTGTTACTTTGAACCC
AGTAAATGTGATTAATACTTCTGACCAAAAGCTTTTATTTACCTATTACT
ATGAAAAGAGATATTTAACTCGTTCTGCTGAGATGTATGCAAAGTTTCAT
ATTGAAGATTTTATAGAAGAAAAATACGGTTTTTTGAATAGAAACCAAGT
ATTTTTTATGAATGGAAGATATCTTTCAAGTTTAGAAACAATAATTAGAG
GACAATTATCAGGGAATATTCCATTGGATACTGTCATTGATATCAATTTA
GCAATACAAGTATATGATACTTCTAATCAAGATTGTATAACTACAGCCTC
TGCTAAGGGTATTGATTTGATCAAAAATGTTATTATAAGGCACCCAAACA
AAGATACAAAAATCGCTGAATATGCAATAGGATCAGGGACTGTTCTATTC
NGTAAGGCACCCAAACAAAGATACCAAAATCGCTGAATATGCAATAGGAT
CAGGGACTGTTCTATtccttaaaaagaaaatttctgaaCATTTCACTGTT
GGTGATAATGTTATCGAACTTTTTAATGGAAACAGAATTTTGAATGACTC
TGATTATTTATATGATGTGCTCATGAACCAAGATttgtttgaagaaaatt
tatatTTGACCTTGCTTTTAAATCCAAACATCAATACAAATGCAGTTTCT
TTCGCTGCGAGGTTATCAATTACTTATTTAAAGACTGCGGATGTAAAATT
TTTGACAAGAACTTTTTCTATTGACCTTTGGAAGCATCAAATAAAGACTG
TTGCAGACCTTAAAAAAGGAATCGAGATGGAAGAAAATATACCAAgacat
ttacaaaaaatcttctttaaagaAGACTTAGATGATGAAGTAAAATTGGT
TAGTTTGGTTGTGCAAGAAGGGTTTTTCACACAGGAAACCATTGCAGTGT
CGTTGATTGTTACTTCTGCAGATATGTTAACACTACACCTTCACAGTAAT
CTTCAGTTAAGGGAGACTCACATTCAAATCTCTGAAACTGAGTTGGTTTC
AGAATTAAAAGATCGTGTAAGTCAACTTTGTGATGTAAACAAGTCCCTCT
TGGACCTTGAAAACAAGGCAATGATATCTTTGAAAGATGAACAACAGATT
TGGGAATGTAAACTTAAAGACAATTTCATTAAAGTTCACAAAGCCATTAG
TGTACAGATTTTACGTAAACATCTCGAAAACCCAAAACAATTATCTTTTc
atgttttgaatttgaataaaGATTCAGTTGAAACAATGAGAGTTGCGTTG
TCTAGATTTTATCACTACCAAGGAACAGTACttgtatttaaaaagaaaaa
caattctgAGAAAGTATCAgggaaaacaaaactaaaacaCCTTGAAGAAT
CTGTTACGTTTAATCTGGAAGAGAGGAAAAAAGATTGTGTTGTATCTTAG
GAGAAGTGAATCACTACTTGCGTAGCAACAAAACTAAATGACTATTTTAT
AAAGGTTCTTTTGTATGTCAAGGTAAGGAAAACAAATTATtactattttt
tattattaaaattaTACAACAAAATAGATCCTTTAAAGAAGGATAATCAG
CTTGGCTgaattacatttttttgttaaaaacaaCTGACATTTGAAgatga
t
Run BLAST on NCBI

protein sequence of TCONS_00001683-protein

>TCONS_00001683-protein ID=TCONS_00001683-protein|Name=TCONS_00001683-protein|organism=Clytia hemisphaerica|type=polypeptide|length=461bp
ILLLEKEREKRFEISMVKSIKIINLEPGGTLFPVEEAQTLDSLSKILEQL
FQIPKEIHVFYVGFVKLDNDSYVKLITDGKSNYYQLQFFVKGTPDSDVVH
HCNVIGLNKELRRIIIRDRSGKEVLSYKPNLNSIVYDLKEAVYLKTKMDP
RNQVLAIKNEHGKEGVLVDNWAFLTDLYFENALMKTVINLKIMVDSTTLR
DEDPHNCFHFDLPFLSLVNINIPGIVGNRSITYPLLERGDFSVLSLKEWI
EENHGIPKFDQLLLHDFQILDDNRQIYKFFPPRRSFDPFEIQVFVYATRD
EKLQNVYAENNIVTLNPVNVINTSDQKLLFTYYYEKRYLTRSAEMYAKFH
IEDFIEEKYGFLNRNQVFFMNGRYLSSLETIIRGQLSGNIPLDTVIDINL
AIQVYDTSNQDCITTASAKGIDLIKNVIIRHPNKDTKIAEYAIGSGTVLF
XKAPKQRYQNR
Run BLAST on NCBI

transcript from alignment at sc0000011:609258..618729-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001683 ID=TCONS_00001683|Name=TCONS_00001683|organism=Clytia hemisphaerica|type=transcript|length=9472bp|location=Sequence derived from alignment at sc0000011:609258..618729- (Clytia hemisphaerica)
ATTTTATTGTTGGAAAAGGAAAGAGAAAAAAGGTAAGTCTAGCCTAGCAT
AGCCTAAATGTCAGCTGTCAGGGGGTGTTAAAAAAATTTAAGAGCTTATT
GATATCAAAAATAAAACACAGAGTTTTCCCAAGCTGTCCTAATGGACCAT
CTCCTTAATATTTGTTTGGGAGAACAAGATGACCTATTGAATCTGTTCCG
CATATTATTATCTACTCCTTATTACAGAATAAGACTCTATACCTTATAAT
TATAGCACGCTGCAAGGGAGAAAGTTAACGTACCTATCTGAACTGATCTG
AACAAAACTTATTTATAGGTAAAATCTAATTTCCCGCTGGTTTTACTTGC
ATCCACTGAAGTATATTCTCAACTTCAGTTGAGCTAGAATCTGACAATGT
ATGTATGTGTGTGTGTATGTATGTCTGTCCGAAAACTTTGGGGCAGGCTG
GAGACTTCAAAAATGATCAGGTTTGGCTAAAATTTGGCACACTTGTTCCT
TGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAATTTTCATTTT
TAAGGGCGTGGTCATGAGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAAAATTTTCATTTTTAAGGGCGTGGTCA
CGAGTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTC
AAAAATGATCGGGTTTGGTTGAAATTCGGCACACTTGTTCCTTGGGTGAC
TATCTGGGGGAATTTTTCTCATTTTCTGAAAATTTTAATTTTTAAGGGTG
TGGTCACGAGTTTTTGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGA
GACTTCAAAAATGATCAGATTTGGCCGAAATTTTGCACACTTGATACTAG
GGCGAATCCCTGGTGGCGGTTTTTTCATTTTTTCAAAATTTCCATTTTCA
AGGGCGTGGTCACAAGTTTTCGCCAAAACGAGGCTAAAACTTTTAGGCAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAGTGCGGTT
AGCACGTTCGACAGTAGGTATCATAATTTAAGCTGTTGTAATTAGTCATT
AAGTTGCAATAGACCAAACACAAGTTATTTGTAATGGCTACTTTACCCAG
AAACTAAAAATTGCATTTCAAAATGTTGTTTGGACGTTTTCTTACATATG
GCCAGCGTAAGCTCCTCATACATTTCTCCTTAGCTTGCATCCAAGCTTTT
CTTTGGATTAATTTGAGTCTTTTTCCAAAGTCTGCAGAACAATTCAAAAC
TGCACTGATAAAATTAGTGTATATAAATCTTGTTTTTAAGGAATTTTGTT
CAGCTAGGCTGAAATCACACTGTTTTTTATCATATCCCTTACTGTATTCA
GCATTATTTCTTTACATGTTAGCTTGCAACTGCTTTTTATTAGGAATCTT
TTAAGTTTTATAGGTTATTTACTTTTTATTTTTATACAATCTTATAACTT
GTATGTATGGATAATGGGTCTTAGGACCTTTTGATACTTAGAGCCTGAAC
CATTCATGTTTTTAAAAACACCTTGCTTACCTGGTTTGCAGAAAACACTT
TCCAGCATGAAAGGTTCAATTTTTAAAAACACCATAAACACCAAATTTCC
TGTCGAAGGCGACTGCTATAAAACAAGTCCTGACTGGCTGAAACGGTATC
GAAAAGTCCCATTTCCCCGTTTTTTTTCCGATTTTCTAGCCCGATTTTTA
ACCCGATTTTTATCTGATTGGTTCAGTCANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAAAAA
TATAGATAGAAGTCATTTCCCAAGTCTTCAGAACACCCAAAAGTTTCCAA
GTCGATAAAAAGCTAAAAAAGAAGTCTGGTGTAAAATATTCACATAATGA
AACACCGGACAGTTCTGTCAGACATAATTTAATAATACTTTTTGGCGCCA
GACAAAAACACTGAACAGTCTGGTAGTCTGGTGTGTTGGCAGGGGGTAGT
GTTATTTTGAATGTCAATGTAGGGAATTCCTTTCAATAACATGTAGAAAT
CATACCCTTTTTGGACTTTCCTTATTGTCTAGCATGATTCCTTCACTAGT
CATCTTACATCCATTTTTCTTTCCGATCTTTTTGAGCCATTTTCAAAATC
TGCAGAACAATTCAAAGTTACACTACTAAAATTAGTGTAATTCTCGTTTT
TAGGGAATTTCCCTCATGCAGGTGAAAGCCACACCCATTTTGGTTATTTC
AGTTATTCAACATTGTTTTGTCTTTACCTGTTAGCTTGTACATCTTTTTG
GTTTGGGGTCTATAAAGTATTTTCTAAGTTTGGAGCACTCCGCCCGCGTT
AAGCCTAAAACCATACAAGCATTAGGTTTGCTTTTTCTACCTAGTAGTGC
ACTGACACTGGTATAGCAAAATCAATATAGATAAATATTAAGTGCTAAAA
AGTTGATCTAATATCAAGCTATCATGTGTCGTCATTACATAATGTTTTCA
CTGCTAATTATACTGAAGTTAAAATAATATCCGAATAGCAAAATGTCTAT
AACCCTTGCCTGGGTCTGAAGAAAAAGGGAATAATGAACAAGATCGTTTC
ATTTTCTTTGCTGCTTTTCTAAGCTTTAATAATTTGGTTCACTTTAACTG
GGGTATTGCAAAAAATAGAAAATTTGCATTCCTTCATATATTTTTGAAAC
AAATATTTTCTTTTCTTCTTCTCTGAGATAAGGGATCTTCTCAAAAATAA
AATCAATTATTTAATCAAATTTAAGCGAAATATTCGATTATTTTCAACAT
GAAATTCGATTATTTAAGTAAACCAATTCGATTATTTAAGGGAACCAATT
CGATTATTTGAGAAAAATATTTCGCTTAGATACTCGAATTTCTCTATATT
TTAATCGAATTTCGATAATTGATAATCGAATTTCGACTAGAAGGATAACC
GAATTTGAAATCAATTGGAAGCGAAAATGCTTTTAAAAACACTTTTAAAA
GTATAACAATATCATCATAAATATATTATTAGAGAGTAAAATTTTATGTT
TTGCTAAAGTGACATTGAGATCCATTTTTCTAGGACTTACTATTGTTCAG
GAATTTGTAAAACTGGCCATGAAATTCACCACAAGGTTCGTCACCGCTTT
GTGTCTTTTTATTTCGACCATGGCTAGCTCAAATAAAATTCTTATACATC
AATTGCACCACAGAGCAAAAACAACCACGATAAAACAAATTTTCTGATCT
CTGACAACTTTATTGGTTCATCTGAAACTTTTGTTTATTTTTTTTTGACA
ATCGAACATTTTAGAATTTGAAAATTCGAACGTTCGAATTTCGAATAAAA
AAATTCGAAAGAGGAAGTAAGTACATGCTTTTTTTATAAGAATGGTGGTT
TTCCAATTTATCATGAATATCTGAATATTCTTAACTTTTTGGAAAAAAAC
GCAAAAAACTTACCGTCACAAACGGTTCTAAGTTTTAAAAACTGTATGTG
ACGAATGGTTTTTCTTAGTTTGTGAAGTTTATCGCTTTTTTAAACAGAGG
TTTTCCTCGTATTCTTGCTTTTAATGATGAAAATTATTTGATTTTTCTTT
GACTTCAAACAGAGTCGCTGAGACAGGGGTGTAGGGAAATTTAATAAGGA
TGAAAATCAAATGATTTTGCTTTGATTTGCAAATGATTTGCCATTTTGCT
AAATGTCCAAAAGTGAATCAACACTGATAAAAATAAAGTCTTATGGATAA
AGGCTCTCTTCGAAAACTGAATAATTTTGAAGGCAGGAAACTTATACAGT
GAAAACTGAAGCAAACAAAGAATTCCATTTCTCTACATACATACCTCTTA
CAATCAAATCTCAATTCAATTAATTTTATAACTTTCCTTCAATCCTCAAA
GGTTTTTTCAAAAATGAGTAATAATAAAATCACAATAACTTAGGTTTTAT
TTTTTGAGAAGTCCAAGTGTTATTCTTTTCAAAGACAAAAGTCACAAATG
AAACCTTTTTGTTTTGATTGCGACATTTTCGAATCTTTCGAATGCGTGAC
GCGCAATTTGATTGTCACAAAATAGAACTCGAGCGAGAAACAATGTAACG
ACTTCTTTACTGAGACGACAGAGATGAAGCTAAATAATCGAATTTGAGAA
TTCGATTAAATAATCGAATTATTTATTTGTTGCTTTTAATAATCAAATTC
AAAAGGAGTCAAATTCGCTTAAATAATCAAATTAATTAGCTTAAATAATC
GAATTAATTTGCTTAAATAATTGAATTAATTCGCTTAAATAATCGAATTC
AACCGCTTCAATAAGCGAATCATTAATCGAATTGCATAGTCGAAATTCGA
TTATTATTTTTGAGAAGATCCCTAAGTATACCTGAAAAGCCACCAGAAGG
TCGGTTAGTGTAAACAAGGAATTATTATAGACACTGGAAAAACTGGAGTA
TTTATTGTTTTCAAAACTTGTCAATCTATATCCACTTGCAGCCTCAGCAT
CCTATTATGCATGAAAAATATTTTATTGTTAATTGGTGTACAAAACCTCA
TACTTTGAGATAACGGTTTAACGTCATTATTTACATAATTTAAGTGTCAT
TTGTATGTTGCGTGTGCGTTACCTACAGTTTTCCTGTCTATAATTTGTAT
GACCTGTGACCTGTAACCTGGGACTTGTAACCTGTGGTTTACACTAACCA
GAAGGTTCTAATTTTGAAGAGATTTTAGTTGACTTACGTCCGAGGGATCC
TGTATTCTTCAAAAGTCGAAATGATGGATGAAGCTCACCGAGTTAAACAT
TACGCAACAGTAACTTACAATTATTGCGCAATTAAAGATTTCTTCTTTGC
AAAAGAGCTATTAAATAATAATTGTACATCGTTTTGTTCACTTGTAAAAT
AAAAAGTTATCAAATGTTATCATAATTTTATGACTTGTGCGAATATGAAA
AGATTATAATGACTGAAAATTGCTGATGTTTGAATCACGAGATTCCGGGA
ACTTTTTATTTAGCATTGGCATAAGTGATGTACTATGATGGTGAAAAAAA
TTGTGTGACATGTGATGGATTTAGCTTAGTTTACTTTAAGTAGATAAAAT
TTGGCGCGGATTTAATTCGGCGATTTGCCAAAATACGATTTTAGGCGGGG
ATTTAATTCGGCGCGATGGATCAATTGATTGATTTGGCGAAATGCAAATT
TTGAGACACTCAACTTACTATAAAATATTTAACTCAGCGAATTTGTCCGC
CAAAATTTATTCACTTAAGATAGTTGATTAGTCCCCCACCAGAAGGTTGG
CTTTATGAGATTTCAGGAGTAACACAGATGTTTTTGTATGTTTTGGTATT
TTGTTGTTGTAAAGTTCCATATCAGACGTTATGCATGTCACTTGATTACG
CAGTAAGGAGTCTGAGTTTTGTATGAATATTTTTGAATTTCTTTGACAAA
ATCTTNGTCACTTGATTACGCAGTAATTTTTTTTTGTTTGAGTCTGAGTT
TTGTATGAATATTTTTGAATTTCTTTGACAAAATCTTTTTTAAACAAACT
AATGATCATATTATTTTTTTTGTGTGTGATTTAGTATTATTAGCAACCTT
ATTTTTATAATCTGAGGAAGGATTGGTAATATAACACTTGTCTTTTGTTT
TAGGTTTGAAATCAGTATGGTAAAATCAATAAAAATTATAAATCTTGAGC
CTGGAGGGACATTGTTTCCTGTAGAGGAGGCACAAACACTTGATAGCCTC
TCTAAAATACTTGAACAACTTTTTCAAATCCCAAAGGAGATTCATGTTTT
CTATGTTGGGTTTGTAAAGCTTGACAATGATTCTTATGTCAAGTTGATAA
CAGATGGAAAATCAAACTATTACCAGCTCCAATTTTTTGTAAAAGGAACC
CCTGATAGTGATGTTGTTCATCATTGTAATGTTATTGGACTGAATAAAGA
ACTCCGAAGAATAATTATCAGAGATCGTAGTGGCAAAGAAGTCCTGTCAT
ATAAGCCAAATTTGAACTCAATTGTTTATGACCTTAAAGAAGCTGTCTAC
CTAAAAACCAAAATGGACCCTCGAAATCAGGTACTTGCCATTAAAAATGA
ACATGGAAAAGAGGGTGTTCTTGTTGATAATTGGGCATTTCTGACTGATT
TATATTTTGAAAATGCTTTAATGAAAACAGTTATTAATTTGAAAATAATG
GTTGACTCTACAACCCTTAGAGATGAAGATCCTCATAACTGTTTTCATTT
TGATTTACCGTTCTTATCACTGGTAAATATCAACATACCAGGTATTGTTG
GCAATAGATCCATAACGTACCCTTTATTGGAAAGGGGAGATTTTAGCGTT
CTTTCTTTAAAAGAATGGATTGAAGAAAACCATGGAATTCCAAAGTTTGA
TCAGCTCCTCCTGCATGATTTCCAGATTTTGGATGACAATCGCCAAATAT
ATAAATTCTTTCCACCACGGCGCTCTTTTGATCCATTTGAGATACAGGTT
TTTGTCTATGCTACTCGGGATGAAAAGTTGCAAAATGTTTATGCTGAAAA
CAACATTGTTACTTTGAACCCAGTAAATGTGATTAATACTTCTGACCAAA
AGCTTTTATTTACCTATTACTATGAAAAGAGATATTTAACTCGTTCTGCT
GAGATGTATGCAAAGTTTCATATTGAAGATTTTATAGAAGAAAAATACGG
TTTTTTGAATAGAAACCAAGTATTTTTTATGAATGGAAGATATCTTTCAA
GTTTAGAAACAATAATTAGAGGACAATTATCAGGGAATATTCCATTGGAT
ACTGTCATTGATATCAATTTAGCAATACAAGTATATGATACTTCTAATCA
AGATTGTATAACTACAGCCTCTGCTAAGGGTATTGATTTGATCAAAAATG
TTATTATAAGGCACCCAAACAAAGATACAAAAATCGCTGAATATGCAATA
GGATCAGGGACTGTTCTATTCNGTAAGGCACCCAAACAAAGATACCAAAA
TCGCTGAATATGCAATAGGATCAGGGACTGTTCTATTCCTTAAAAAGAAA
ATTTCTGAACATTTCACTGTTGGTGATAATGTTATCGAACTTTTTAATGG
AAACAGAATTTTGAATGACTCTGATTATTTATATGATGTGCTCATGAACC
AAGATTTGTTTGAAGAAAATTTATATTTGACCTTGCTTTTAAATCCAAAC
ATCAATACAAATGCAGTTTCTTTCGCTGCGAGGTTATCAATTACTTATTT
AAAGACTGCGGATGTAAAATTTTTGACAAGAACTTTTTCTATTGACCTTT
GGAAGCATCAAATAAAGACTGTTGCAGACCTTAAAAAAGGAATCGAGATG
GAAGAAAATATACCAAGACATTTACAAAAAATCTTCTTTAAAGAAGACTT
AGATGATGAAGTAAAATTGGTTAGTTTGGTTGTGCAAGAAGGGTTTTTCA
CACAGGAAACCATTGCAGTGTCGTTGATTGTTACTTCTGCAGATATGTTA
ACACTACACCTTCACAGTAATCTTCAGTTAAGGGAGACTCACATTCAAAT
CTCTGAAACTGAGTTGGTTTCAGAATTAAAAGATCGTGTAAGTCAACTTT
GTGATGTAAACAAGTCCCTCTTGGACCTTGAAAACAAGGCAATGATATCT
TTGAAAGATGAACAACAGATTTGGGAATGTAAACTTAAAGACAATTTCAT
TAAAGTTCACAAAGCCATTAGTGTACAGATTTTACGTAAACATCTCGAAA
ACCCAAAACAATTATCTTTTCATGTTTTGAATTTGAATAAAGATTCAGTT
GAAACAATGAGAGTTGCGTTGTCTAGATTTTATCACTACCAAGGAACAGT
ACTTGTATTTAAAAAGAAAAACAATTCTGAGAAAGTATCAGGGAAAACAA
AACTAAAACACCTTGAAGAATCTGTTACGTTTAATCTGGAAGAGAGGAAA
AAAGATTGTGTTGTATCTTAGGAGAAGTGAATCACTACTTGCGTAGCAAC
AAAACTAAATGACTATTTTATAAAGGTTCTTTTGTATGTCAAGGTAAGGA
AAACAAATTATTACTATTTTTTATTATTAAAATTATACAACAAAATAGAT
CCTTTAAAGAAGGATAATCAGCTTGGCTGAATTACATTTTTTTGTTAAAA
ACAACTGACATTTGAAGATGAT

Coding sequence (CDS) from alignment at sc0000011:609258..618729-

>TCONS_00001683 ID=TCONS_00001683|Name=TCONS_00001683|organism=Clytia hemisphaerica|type=CDS|length=2772bp|location=Sequence derived from alignment at sc0000011:609258..618729- (Clytia hemisphaerica)
GTTTGAAATCAGTATGGTAAAATCAATAAAAATTATAAATCTTGAGCCTG
GAGGGACATTGTTTCCTGTAGAGGAGGCACAAACACTTGATAGCCTCTCT
AAAATACTTGAACAACTTTTTCAAATCCCAAAGGAGATTCATGTTTTCTA
TGTTGGGTTTGTAAAGCTTGACAATGATTCTTATGTCAAGTTGATAACAG
ATGGAAAATCAAACTATTACCAGCTCCAATTTTTTGTAAAAGGAACCCCT
GATAGTGATGTTGTTCATCATTGTAATGTTATTGGACTGAATAAAGAACT
CCGAAGAATAATTATCAGAGATCGTAGTGGCAAAGAAGTCCTGTCATATA
AGCCAAATTTGAACTCAATTGTTTATGACCTTAAAGAAGCTGTCTACCTA
AAAACCAAAATGGACCCTCGAAATCAGGTACTTGCCATTAAAAATGAACA
TGGAAAAGAGGGTGTTCTTGTTGATAATTGGGCATTTCTGACTGATTTAT
ATTTTGAAAATGCTTTAATGAAAACAGTTATTAATTTGAAAATAATGGTT
GACTCTACAACCCTTAGAGATGAAGATCCTCATAACTGTTTTCATTTTGA
TTTACCGTTCTTATCACTGGTAAATATCAACATACCAGGTATTGTTGGCA
ATAGATCCATAACGTACCCTTTATTGGAAAGGGGAGATTTTAGCGTTCTT
TCTTTAAAAGAATGGATTGAAGAAAACCATGGAATTCCAAAGTTTGATCA
GCTCCTCCTGCATGATTTCCAGATTTTGGATGACAATCGCCAAATATATA
AATTCTTTCCACCACGGCGCTCTTTTGATCCATTTGAGATACAGGTTTTT
GTCTATGCTACTCGGGATGAAAAGTTGCAAAATGTTTATGCTGAAAACAA
CATTGTTACTTTGAACCCAGTAAATGTGATTAATACTTCTGACCAAAAGC
TTTTATTTACCTATTACTATGAAAAGAGATATTTAACTCGTTCTGCTGAG
ATGTATGCAAAGTTTCATATTGAAGATTTTATAGAAGAAAAATACGGTTT
TTTGAATAGAAACCAAGTATTTTTTATGAATGGAAGATATCTTTCAAGTT
TAGAAACAATAATTAGAGGACAATTATCAGGGAATATTCCATTGGATACT
GTCATTGATATCAATTTAGCAATACAAGTATATGATACTTCTAATCAAGA
TTGTATAACTACAGCCTCTGCTAAGGGTATTGATTTGATCAAAAATGTTA
TTATAAGGCACCCAAACAAAGATACAAAAATCGCTGAATATGCAATAGGA
TCAGGGACTGTTCTATTCNGTAAGGCACCCAAACAAAGATACCAAAATCG
CTGAATTTTATTGTTGGAAAAGGAAAGAGAAAAAAGGTTTGAAATCAGTA
TGGTAAAATCAATAAAAATTATAAATCTTGAGCCTGGAGGGACATTGTTT
CCTGTAGAGGAGGCACAAACACTTGATAGCCTCTCTAAAATACTTGAACA
ACTTTTTCAAATCCCAAAGGAGATTCATGTTTTCTATGTTGGGTTTGTAA
AGCTTGACAATGATTCTTATGTCAAGTTGATAACAGATGGAAAATCAAAC
TATTACCAGCTCCAATTTTTTGTAAAAGGAACCCCTGATAGTGATGTTGT
TCATCATTGTAATGTTATTGGACTGAATAAAGAACTCCGAAGAATAATTA
TCAGAGATCGTAGTGGCAAAGAAGTCCTGTCATATAAGCCAAATTTGAAC
TCAATTGTTTATGACCTTAAAGAAGCTGTCTACCTAAAAACCAAAATGGA
CCCTCGAAATCAGGTACTTGCCATTAAAAATGAACATGGAAAAGAGGGTG
TTCTTGTTGATAATTGGGCATTTCTGACTGATTTATATTTTGAAAATGCT
TTAATGAAAACAGTTATTAATTTGAAAATAATGGTTGACTCTACAACCCT
TAGAGATGAAGATCCTCATAACTGTTTTCATTTTGATTTACCGTTCTTAT
CACTGGTAAATATCAACATACCAGGTATTGTTGGCAATAGATCCATAACG
TACCCTTTATTGGAAAGGGGAGATTTTAGCGTTCTTTCTTTAAAAGAATG
GATTGAAGAAAACCATGGAATTCCAAAGTTTGATCAGCTCCTCCTGCATG
ATTTCCAGATTTTGGATGACAATCGCCAAATATATAAATTCTTTCCACCA
CGGCGCTCTTTTGATCCATTTGAGATACAGGTTTTTGTCTATGCTACTCG
GGATGAAAAGTTGCAAAATGTTTATGCTGAAAACAACATTGTTACTTTGA
ACCCAGTAAATGTGATTAATACTTCTGACCAAAAGCTTTTATTTACCTAT
TACTATGAAAAGAGATATTTAACTCGTTCTGCTGAGATGTATGCAAAGTT
TCATATTGAAGATTTTATAGAAGAAAAATACGGTTTTTTGAATAGAAACC
AAGTATTTTTTATGAATGGAAGATATCTTTCAAGTTTAGAAACAATAATT
AGAGGACAATTATCAGGGAATATTCCATTGGATACTGTCATTGATATCAA
TTTAGCAATACAAGTATATGATACTTCTAATCAAGATTGTATAACTACAG
CCTCTGCTAAGGGTATTGATTTGATCAAAAATGTTATTATAAGGCACCCA
AACAAAGATACAAAAATCGCTGAATATGCAATAGGATCAGGGACTGTTCT
ATTCNGTAAGGCACCCAAACAAAGATACCAAAATCGCTGAATTTTATTGT
TGGAAAAGGAAAGAGAAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000876XLOC_000876Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001683-proteinTCONS_00001683-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001683-exon-sc0000011-1575043694:618698..618729TCONS_00001683-exon-sc0000011-1575043694:618698..618729Clytia hemisphaericaexon
TCONS_00001683-exon-sc0000011-1575043694:609258..611776TCONS_00001683-exon-sc0000011-1575043694:609258..611776Clytia hemisphaericaexon
TCONS_00001683-exon-sc0000011-1510915933:618698..618729TCONS_00001683-exon-sc0000011-1510915933:618698..618729Clytia hemisphaericaexon
TCONS_00001683-exon-sc0000011-1510915933:609258..611776TCONS_00001683-exon-sc0000011-1510915933:609258..611776Clytia hemisphaericaexon
TCONS_00001683-exon-sc0000011-1491911889:618698..618729TCONS_00001683-exon-sc0000011-1491911889:618698..618729Clytia hemisphaericaexon
TCONS_00001683-exon-sc0000011-1491911889:609258..611776TCONS_00001683-exon-sc0000011-1491911889:609258..611776Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:609258..618729 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.666533	0.531798	0.343038	0.218146	6.90486	4.53616	6.79704	7.18379	1.9148	2.52991	1.93378	1.34181	2.09555	1.39155	1.58273	2.04006	3.09316	2.55263	1.33656	1.38177	2.07979	1.62883	2.7964	3.41083	3.41549	4.42721	2.97034	1.90645	3.27866	4.12843
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001683 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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