XLOC_000876 (gene) - C. hemisphaerica

Overview
NameXLOC_000876
Unique NameXLOC_000876
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:609258..618729-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000876 ID=XLOC_000876|Name=XLOC_000876|organism=Clytia hemisphaerica|type=gene|length=9472bp|location=Sequence derived from alignment at sc0000011:609258..618729- (Clytia hemisphaerica)
ATTTTATTGTTGGAAAAGGAAAGAGAAAAAAGGTAAGTCTAGCCTAGCAT AGCCTAAATGTCAGCTGTCAGGGGGTGTTAAAAAAATTTAAGAGCTTATT GATATCAAAAATAAAACACAGAGTTTTCCCAAGCTGTCCTAATGGACCAT CTCCTTAATATTTGTTTGGGAGAACAAGATGACCTATTGAATCTGTTCCG CATATTATTATCTACTCCTTATTACAGAATAAGACTCTATACCTTATAAT TATAGCACGCTGCAAGGGAGAAAGTTAACGTACCTATCTGAACTGATCTG AACAAAACTTATTTATAGGTAAAATCTAATTTCCCGCTGGTTTTACTTGC ATCCACTGAAGTATATTCTCAACTTCAGTTGAGCTAGAATCTGACAATGT ATGTATGTGTGTGTGTATGTATGTCTGTCCGAAAACTTTGGGGCAGGCTG GAGACTTCAAAAATGATCAGGTTTGGCTAAAATTTGGCACACTTGTTCCT TGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAATTTTCATTTT TAAGGGCGTGGTCATGAGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNAAAATTTTCATTTTTAAGGGCGTGGTCA CGAGTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTC AAAAATGATCGGGTTTGGTTGAAATTCGGCACACTTGTTCCTTGGGTGAC TATCTGGGGGAATTTTTCTCATTTTCTGAAAATTTTAATTTTTAAGGGTG TGGTCACGAGTTTTTGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGA GACTTCAAAAATGATCAGATTTGGCCGAAATTTTGCACACTTGATACTAG GGCGAATCCCTGGTGGCGGTTTTTTCATTTTTTCAAAATTTCCATTTTCA AGGGCGTGGTCACAAGTTTTCGCCAAAACGAGGCTAAAACTTTTAGGCAN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAGTGCGGTT AGCACGTTCGACAGTAGGTATCATAATTTAAGCTGTTGTAATTAGTCATT AAGTTGCAATAGACCAAACACAAGTTATTTGTAATGGCTACTTTACCCAG AAACTAAAAATTGCATTTCAAAATGTTGTTTGGACGTTTTCTTACATATG GCCAGCGTAAGCTCCTCATACATTTCTCCTTAGCTTGCATCCAAGCTTTT CTTTGGATTAATTTGAGTCTTTTTCCAAAGTCTGCAGAACAATTCAAAAC TGCACTGATAAAATTAGTGTATATAAATCTTGTTTTTAAGGAATTTTGTT CAGCTAGGCTGAAATCACACTGTTTTTTATCATATCCCTTACTGTATTCA GCATTATTTCTTTACATGTTAGCTTGCAACTGCTTTTTATTAGGAATCTT TTAAGTTTTATAGGTTATTTACTTTTTATTTTTATACAATCTTATAACTT GTATGTATGGATAATGGGTCTTAGGACCTTTTGATACTTAGAGCCTGAAC CATTCATGTTTTTAAAAACACCTTGCTTACCTGGTTTGCAGAAAACACTT TCCAGCATGAAAGGTTCAATTTTTAAAAACACCATAAACACCAAATTTCC TGTCGAAGGCGACTGCTATAAAACAAGTCCTGACTGGCTGAAACGGTATC GAAAAGTCCCATTTCCCCGTTTTTTTTCCGATTTTCTAGCCCGATTTTTA ACCCGATTTTTATCTGATTGGTTCAGTCANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAAAAA TATAGATAGAAGTCATTTCCCAAGTCTTCAGAACACCCAAAAGTTTCCAA GTCGATAAAAAGCTAAAAAAGAAGTCTGGTGTAAAATATTCACATAATGA AACACCGGACAGTTCTGTCAGACATAATTTAATAATACTTTTTGGCGCCA GACAAAAACACTGAACAGTCTGGTAGTCTGGTGTGTTGGCAGGGGGTAGT GTTATTTTGAATGTCAATGTAGGGAATTCCTTTCAATAACATGTAGAAAT CATACCCTTTTTGGACTTTCCTTATTGTCTAGCATGATTCCTTCACTAGT CATCTTACATCCATTTTTCTTTCCGATCTTTTTGAGCCATTTTCAAAATC TGCAGAACAATTCAAAGTTACACTACTAAAATTAGTGTAATTCTCGTTTT TAGGGAATTTCCCTCATGCAGGTGAAAGCCACACCCATTTTGGTTATTTC AGTTATTCAACATTGTTTTGTCTTTACCTGTTAGCTTGTACATCTTTTTG GTTTGGGGTCTATAAAGTATTTTCTAAGTTTGGAGCACTCCGCCCGCGTT AAGCCTAAAACCATACAAGCATTAGGTTTGCTTTTTCTACCTAGTAGTGC ACTGACACTGGTATAGCAAAATCAATATAGATAAATATTAAGTGCTAAAA AGTTGATCTAATATCAAGCTATCATGTGTCGTCATTACATAATGTTTTCA CTGCTAATTATACTGAAGTTAAAATAATATCCGAATAGCAAAATGTCTAT AACCCTTGCCTGGGTCTGAAGAAAAAGGGAATAATGAACAAGATCGTTTC ATTTTCTTTGCTGCTTTTCTAAGCTTTAATAATTTGGTTCACTTTAACTG GGGTATTGCAAAAAATAGAAAATTTGCATTCCTTCATATATTTTTGAAAC AAATATTTTCTTTTCTTCTTCTCTGAGATAAGGGATCTTCTCAAAAATAA AATCAATTATTTAATCAAATTTAAGCGAAATATTCGATTATTTTCAACAT GAAATTCGATTATTTAAGTAAACCAATTCGATTATTTAAGGGAACCAATT CGATTATTTGAGAAAAATATTTCGCTTAGATACTCGAATTTCTCTATATT TTAATCGAATTTCGATAATTGATAATCGAATTTCGACTAGAAGGATAACC GAATTTGAAATCAATTGGAAGCGAAAATGCTTTTAAAAACACTTTTAAAA GTATAACAATATCATCATAAATATATTATTAGAGAGTAAAATTTTATGTT TTGCTAAAGTGACATTGAGATCCATTTTTCTAGGACTTACTATTGTTCAG GAATTTGTAAAACTGGCCATGAAATTCACCACAAGGTTCGTCACCGCTTT GTGTCTTTTTATTTCGACCATGGCTAGCTCAAATAAAATTCTTATACATC AATTGCACCACAGAGCAAAAACAACCACGATAAAACAAATTTTCTGATCT CTGACAACTTTATTGGTTCATCTGAAACTTTTGTTTATTTTTTTTTGACA ATCGAACATTTTAGAATTTGAAAATTCGAACGTTCGAATTTCGAATAAAA AAATTCGAAAGAGGAAGTAAGTACATGCTTTTTTTATAAGAATGGTGGTT TTCCAATTTATCATGAATATCTGAATATTCTTAACTTTTTGGAAAAAAAC GCAAAAAACTTACCGTCACAAACGGTTCTAAGTTTTAAAAACTGTATGTG ACGAATGGTTTTTCTTAGTTTGTGAAGTTTATCGCTTTTTTAAACAGAGG TTTTCCTCGTATTCTTGCTTTTAATGATGAAAATTATTTGATTTTTCTTT GACTTCAAACAGAGTCGCTGAGACAGGGGTGTAGGGAAATTTAATAAGGA TGAAAATCAAATGATTTTGCTTTGATTTGCAAATGATTTGCCATTTTGCT AAATGTCCAAAAGTGAATCAACACTGATAAAAATAAAGTCTTATGGATAA AGGCTCTCTTCGAAAACTGAATAATTTTGAAGGCAGGAAACTTATACAGT GAAAACTGAAGCAAACAAAGAATTCCATTTCTCTACATACATACCTCTTA CAATCAAATCTCAATTCAATTAATTTTATAACTTTCCTTCAATCCTCAAA GGTTTTTTCAAAAATGAGTAATAATAAAATCACAATAACTTAGGTTTTAT TTTTTGAGAAGTCCAAGTGTTATTCTTTTCAAAGACAAAAGTCACAAATG AAACCTTTTTGTTTTGATTGCGACATTTTCGAATCTTTCGAATGCGTGAC GCGCAATTTGATTGTCACAAAATAGAACTCGAGCGAGAAACAATGTAACG ACTTCTTTACTGAGACGACAGAGATGAAGCTAAATAATCGAATTTGAGAA TTCGATTAAATAATCGAATTATTTATTTGTTGCTTTTAATAATCAAATTC AAAAGGAGTCAAATTCGCTTAAATAATCAAATTAATTAGCTTAAATAATC GAATTAATTTGCTTAAATAATTGAATTAATTCGCTTAAATAATCGAATTC AACCGCTTCAATAAGCGAATCATTAATCGAATTGCATAGTCGAAATTCGA TTATTATTTTTGAGAAGATCCCTAAGTATACCTGAAAAGCCACCAGAAGG TCGGTTAGTGTAAACAAGGAATTATTATAGACACTGGAAAAACTGGAGTA TTTATTGTTTTCAAAACTTGTCAATCTATATCCACTTGCAGCCTCAGCAT CCTATTATGCATGAAAAATATTTTATTGTTAATTGGTGTACAAAACCTCA TACTTTGAGATAACGGTTTAACGTCATTATTTACATAATTTAAGTGTCAT TTGTATGTTGCGTGTGCGTTACCTACAGTTTTCCTGTCTATAATTTGTAT GACCTGTGACCTGTAACCTGGGACTTGTAACCTGTGGTTTACACTAACCA GAAGGTTCTAATTTTGAAGAGATTTTAGTTGACTTACGTCCGAGGGATCC TGTATTCTTCAAAAGTCGAAATGATGGATGAAGCTCACCGAGTTAAACAT TACGCAACAGTAACTTACAATTATTGCGCAATTAAAGATTTCTTCTTTGC AAAAGAGCTATTAAATAATAATTGTACATCGTTTTGTTCACTTGTAAAAT AAAAAGTTATCAAATGTTATCATAATTTTATGACTTGTGCGAATATGAAA AGATTATAATGACTGAAAATTGCTGATGTTTGAATCACGAGATTCCGGGA ACTTTTTATTTAGCATTGGCATAAGTGATGTACTATGATGGTGAAAAAAA TTGTGTGACATGTGATGGATTTAGCTTAGTTTACTTTAAGTAGATAAAAT TTGGCGCGGATTTAATTCGGCGATTTGCCAAAATACGATTTTAGGCGGGG ATTTAATTCGGCGCGATGGATCAATTGATTGATTTGGCGAAATGCAAATT TTGAGACACTCAACTTACTATAAAATATTTAACTCAGCGAATTTGTCCGC CAAAATTTATTCACTTAAGATAGTTGATTAGTCCCCCACCAGAAGGTTGG CTTTATGAGATTTCAGGAGTAACACAGATGTTTTTGTATGTTTTGGTATT TTGTTGTTGTAAAGTTCCATATCAGACGTTATGCATGTCACTTGATTACG CAGTAAGGAGTCTGAGTTTTGTATGAATATTTTTGAATTTCTTTGACAAA ATCTTNGTCACTTGATTACGCAGTAATTTTTTTTTGTTTGAGTCTGAGTT TTGTATGAATATTTTTGAATTTCTTTGACAAAATCTTTTTTAAACAAACT AATGATCATATTATTTTTTTTGTGTGTGATTTAGTATTATTAGCAACCTT ATTTTTATAATCTGAGGAAGGATTGGTAATATAACACTTGTCTTTTGTTT TAGGTTTGAAATCAGTATGGTAAAATCAATAAAAATTATAAATCTTGAGC CTGGAGGGACATTGTTTCCTGTAGAGGAGGCACAAACACTTGATAGCCTC TCTAAAATACTTGAACAACTTTTTCAAATCCCAAAGGAGATTCATGTTTT CTATGTTGGGTTTGTAAAGCTTGACAATGATTCTTATGTCAAGTTGATAA CAGATGGAAAATCAAACTATTACCAGCTCCAATTTTTTGTAAAAGGAACC CCTGATAGTGATGTTGTTCATCATTGTAATGTTATTGGACTGAATAAAGA ACTCCGAAGAATAATTATCAGAGATCGTAGTGGCAAAGAAGTCCTGTCAT ATAAGCCAAATTTGAACTCAATTGTTTATGACCTTAAAGAAGCTGTCTAC CTAAAAACCAAAATGGACCCTCGAAATCAGGTACTTGCCATTAAAAATGA ACATGGAAAAGAGGGTGTTCTTGTTGATAATTGGGCATTTCTGACTGATT TATATTTTGAAAATGCTTTAATGAAAACAGTTATTAATTTGAAAATAATG GTTGACTCTACAACCCTTAGAGATGAAGATCCTCATAACTGTTTTCATTT TGATTTACCGTTCTTATCACTGGTAAATATCAACATACCAGGTATTGTTG GCAATAGATCCATAACGTACCCTTTATTGGAAAGGGGAGATTTTAGCGTT CTTTCTTTAAAAGAATGGATTGAAGAAAACCATGGAATTCCAAAGTTTGA TCAGCTCCTCCTGCATGATTTCCAGATTTTGGATGACAATCGCCAAATAT ATAAATTCTTTCCACCACGGCGCTCTTTTGATCCATTTGAGATACAGGTT TTTGTCTATGCTACTCGGGATGAAAAGTTGCAAAATGTTTATGCTGAAAA CAACATTGTTACTTTGAACCCAGTAAATGTGATTAATACTTCTGACCAAA AGCTTTTATTTACCTATTACTATGAAAAGAGATATTTAACTCGTTCTGCT GAGATGTATGCAAAGTTTCATATTGAAGATTTTATAGAAGAAAAATACGG TTTTTTGAATAGAAACCAAGTATTTTTTATGAATGGAAGATATCTTTCAA GTTTAGAAACAATAATTAGAGGACAATTATCAGGGAATATTCCATTGGAT ACTGTCATTGATATCAATTTAGCAATACAAGTATATGATACTTCTAATCA AGATTGTATAACTACAGCCTCTGCTAAGGGTATTGATTTGATCAAAAATG TTATTATAAGGCACCCAAACAAAGATACAAAAATCGCTGAATATGCAATA GGATCAGGGACTGTTCTATTCNGTAAGGCACCCAAACAAAGATACCAAAA TCGCTGAATATGCAATAGGATCAGGGACTGTTCTATTCCTTAAAAAGAAA ATTTCTGAACATTTCACTGTTGGTGATAATGTTATCGAACTTTTTAATGG AAACAGAATTTTGAATGACTCTGATTATTTATATGATGTGCTCATGAACC AAGATTTGTTTGAAGAAAATTTATATTTGACCTTGCTTTTAAATCCAAAC ATCAATACAAATGCAGTTTCTTTCGCTGCGAGGTTATCAATTACTTATTT AAAGACTGCGGATGTAAAATTTTTGACAAGAACTTTTTCTATTGACCTTT GGAAGCATCAAATAAAGACTGTTGCAGACCTTAAAAAAGGAATCGAGATG GAAGAAAATATACCAAGACATTTACAAAAAATCTTCTTTAAAGAAGACTT AGATGATGAAGTAAAATTGGTTAGTTTGGTTGTGCAAGAAGGGTTTTTCA CACAGGAAACCATTGCAGTGTCGTTGATTGTTACTTCTGCAGATATGTTA ACACTACACCTTCACAGTAATCTTCAGTTAAGGGAGACTCACATTCAAAT CTCTGAAACTGAGTTGGTTTCAGAATTAAAAGATCGTGTAAGTCAACTTT GTGATGTAAACAAGTCCCTCTTGGACCTTGAAAACAAGGCAATGATATCT TTGAAAGATGAACAACAGATTTGGGAATGTAAACTTAAAGACAATTTCAT TAAAGTTCACAAAGCCATTAGTGTACAGATTTTACGTAAACATCTCGAAA ACCCAAAACAATTATCTTTTCATGTTTTGAATTTGAATAAAGATTCAGTT GAAACAATGAGAGTTGCGTTGTCTAGATTTTATCACTACCAAGGAACAGT ACTTGTATTTAAAAAGAAAAACAATTCTGAGAAAGTATCAGGGAAAACAA AACTAAAACACCTTGAAGAATCTGTTACGTTTAATCTGGAAGAGAGGAAA AAAGATTGTGTTGTATCTTAGGAGAAGTGAATCACTACTTGCGTAGCAAC AAAACTAAATGACTATTTTATAAAGGTTCTTTTGTATGTCAAGGTAAGGA AAACAAATTATTACTATTTTTTATTATTAAAATTATACAACAAAATAGAT CCTTTAAAGAAGGATAATCAGCTTGGCTGAATTACATTTTTTTGTTAAAA ACAACTGACATTTGAAGATGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001683TCONS_00001683Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001683-proteinTCONS_00001683-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:609258..618729 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.67 0.53 0.34 0.22 6.9 4.54 6.8 7.18 1.91 2.53 1.93 1.34 2.1 1.39 1.58 2.04 3.09 2.55 1.34 1.38 2.08 1.63 2.8 3.41 3.42 4.43 2.97 1.91 3.28 4.13