TCONS_00001650 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001650
Unique NameTCONS_00001650
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1045

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001650 ID=TCONS_00001650|Name=TCONS_00001650|organism=Clytia hemisphaerica|type=transcript|length=1045bp
AGCAGACTACAAAGTGAAGCGTTTGCTTGAATATTATATGTTAATATGAA
GACTTGGGCTATAATTACTGGAGCAGGAACTGGAATTGGGGCAGCCTTGG
taaaagaactttcaaaattgaattCATTTAGTATTCTAGCCTTAGGGAGA
CGAATTGCTCCTCTAGAAAAGACAAAATCAGAATGCGAAAATAAGGATCA
AGTAACAGTTATAtctgctgacatcagcaaaaatGATGATctccaaaaaa
tcaaatcaataatttcTCCAGAAGacaatgtcaaatttttggtaCAAAAT
GCAGCTGTCGGTTTACCTGACAAACTGATGGATATCAAAAGAGAAGATTT
CGAATATGCACTTGCAGTCAATGTGACTGCTCCTTTGCTTTTATCTCAAA
TGTTTTTACCACAGTTATCCAAATGCAAAGGAAGAATCATTCATATTGGA
ACAGGAGTTGCTTTCAATCCTCAGGTCGGAACTTCGACTTATGGTATAAC
TAAAATGGCTTTCCATCGTTTATATACTCAACTTCAAGTTGAATTGAAAG
GCACAGGTGCACAAATTGCCATGGTTCTTCCTGGAGTTGTTGATACCGAA
GGCTTGTGGGATCATTACGATTTAGCCAAAAAACAAGAGTTGCCCCATAC
AGCATATTTTGATCAGGTCAAACGAGAAGGGAAAATATTGTCTTCAGAGG
CTTCAGCTAAATTCTTAAAATATGTCATGTGTGACACAAGTGAGGAAGAC
TTCCCCAAAGAATGGAATGCCAATAACGAAAGCCTGTGGTCACTTTGGAA
AAATTAAGTCAtatgtttgaagaaaaaaacaaaaaattttttaatgacaT
GTAGGTGGAGCATagtatttccattttttttttaattctatagattaatt
tttgtatatttttaggaaaaaaggactatttcaaataaaattgattataa
atattttgatgGAGAACAAAACTGATTGAATATAGTTTGATTTGTGTTGG
GAAAATGTCCATATTAAGATAGACACAAAAAATAGTAAGTACCCA
Run BLAST on NCBI

protein sequence of TCONS_00001650-protein

>TCONS_00001650-protein ID=TCONS_00001650-protein|Name=TCONS_00001650-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MKTWAIITGAGTGIGAALVKELSKLNSFSILALGRRIAPLEKTKSECENK
DQVTVISADISKNDDLQKIKSIISPEDNVKFLVQNAAVGLPDKLMDIKRE
DFEYALAVNVTAPLLLSQMFLPQLSKCKGRIIHIGTGVAFNPQVGTSTYG
ITKMAFHRLYTQLQVELKGTGAQIAMVLPGVVDTEGLWDHYDLAKKQELP
HTAYFDQVKREGKILSSEASAKFLKYVMCDTSEEDFPKEWNANNESLWSL
WKN
Run BLAST on NCBI

transcript from alignment at sc0000011:244016..253431-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001650 ID=TCONS_00001650|Name=TCONS_00001650|organism=Clytia hemisphaerica|type=transcript|length=9416bp|location=Sequence derived from alignment at sc0000011:244016..253431- (Clytia hemisphaerica)
AGCAGACTACAAAGTGAAGCGTTTGCTTGGTAAGACTTTTTTCAATGCTT
TCTTATTGCACGTTGTATTACAGGGTTCAGACAGACCCTGGAAAACCTGT
AAAACCTGGAAATATGATAAATTTTCAGAAAAATCAGGGAAACTCAGGGA
AACCCAGGGAAAAAAATTTTTTTCCCAGTCTGCTCAGGGAAACTCAGGGA
ATTTTATTTTTTGAAGAATGAATGGAAAAAAACAGATTTACTAGCCGTAT
TGTATAAGGGTTGCGAAGCGATCCAGACTCCACCTCAATTCGCAAGTTGC
TAGCAAAATAAGAGACACTCTAAAAATCCCTCTAATAAAAAAAGCCGCTA
TAGAGACAGGGTCCTAAGCTAAGAGCCTTAATGCCCCAAACACACCACAT
AATCTACAGAGGCACAACACCCGCCCCCGCCCGCCGCGCATTGCTCTTTT
TTTTCCTTCTATTTATGGCCGATGAAAGTCACATGTGAGTTTACCGTCGG
CCGCCCGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTGGGAAAATAATGAATAATGAATAATGAAATCATGCCGCATCT
ATTTTCGGGTAAGTTGACGACGGTAAACTCACATGTAACTTACATCGGCC
TATTCTAGTGTAAATGGTGCCTTAATAAAATCGAACGATATTAGTCGAAC
GATCGAACATTTTTATTCGAATCACGAATCGTCTTTCGAAATCATCAAAA
CATAAAAATAAAACAAAAACAAAAATGTAAAAAGATGGCTTGTTGGTTCT
TGGCTTTGGGCAGTTTTGATTTATTTCTTGACAAATTATTGACAAATTTG
ATTACGNNTAACAGCAAAATAAACATTTAAAACCGAAGAACCACTGCTTA
GATTGCTTAGATGCGTGCCGCCCGCGCGGCAATTTGATCAACTTCAGATT
CTAAGTACATGTTTCGGCTTCCGGTAATTTTGTTGCTGTTCACTGTTAGG
GTACACCATTTTAAAACGGCATTTTTCGCAGTCCTAGCTACCAAACCGAG
AAAGTTTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAGCCAAA
CCATTCAAGGTCATTTTGATAAAATCATCGGTTTGGAGATGTGATTTATA
TAGCAAATTTTATAGCAAATTTTCGCTTGGGATAGAAGTTAAAGGTAGGT
GCACAATATAGCAAAACTGCTTCGCTCATAAATTCGCTTCGCAAAAAGTT
TTTTTAGTTTTAAAGTGTTTATTCATATTATGCAGTATTTGTAGCTTTAA
TTTTTACCTTAGGTTTACCATTTGATTTGTGTGCCTTTTGTTTAAAGATA
CATCTCTTTTGACTCTGCTTAGTTTTTATGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTGAAAGTTTG
TCTCGGCCTTTTTATAATGAGCGAGACATACGTTCTCTGATTACGCAATT
TTCATATTGACATTTTCGAGGCATTTTGATGTAACTGCCTGTATTATATT
TTATTAGTTTGAAATCATTTATGGGGAGTTCTCGGAAGTTTGACAGCATC
ACTTATATATCCAGCTTTATATGATAGCTAATAGGAAATATGACGGTTGG
CAAACAATATCATACTCCAGGATGCAAGTGAAATTTTTCAATCCGCGGAC
GTAGACGGGGGTTCGGTTATTATCAGTTAGGGTTTTAGGGTTGGAGCTCG
AGAGTCACAATATAGGTTGGCAGACGATATCATCCACACCAGGATACAAG
TGAAATTTTTCAATCTGCAAACCTAGACGGGGTTCGGTTATTATCAGTTA
GGGTTAGGGTTGGAGCTTGAGAGTCACAATATAAGGCCGAAGGCCTTCTT
AGGGGCATCCGTACCCTGTGACCTAACTTAGGATCCCGTAGGGATCTTTG
TAGGGGCACCGGTAGGGTTGGGAGCTTTCTTAATAAAGGTCTGTAAATTA
CACGCTATAAGTATTTGTGAGTGACAACCAAGGTTGCTTGCATTTGGTGG
TTCGAGCTGGGGTCGGAGACCAATTTCACTGGTAGGGTCAAATTTCAGAA
AAATACTTAGAAAACAGTTAGAAACACTACAGAAAGTCAGAAAATCAGGA
TAGAAGATAGGAAAGTAGAAAATAGGGGGAAAATAAGAGAGGATGCATTC
TGGTGGATGATATCGTTTGCCAACCCACAATATAAGGCCGAAGGCCTTCT
TAGGGGCATTCGTACCCTGTGACTTAACTTTGGATCCCGTAGGGATCCTT
GTAGGGGAACCGGTAGGGTTGGGAGCTTTCTTAATTAAGGTCTGTAAATT
ACACACTATAAGTATTTGTGAATGACAGTTTTCTGTCGTGTCTCGTTGGC
GCAAGCGGTTAGGCGTTGGGTTTGTAAACCAAGAGGTTGCTTGCATTTGG
TGGTTCGAGCCGGGGTCGGTGACCTCTTTCTTCACCGGTAAGGGCAAATT
TCAGAAAAATACATAGAAAATTAGTTATTTAATAGGCCATTGCGTTCTCC
AAAACAAGTATATATCAAAAACAAACATGGTAAAGTAACATTTGCCATGG
CATGGAGGAATGAATAATGAACTTCTCTAAATTGATTTTTCTGGTGAAAA
TTTCTTTTCCATGAAAGACTGTTAAAAAATTATAACCCCTTCCCCCTAAA
CGTCCATTTGACATTTTCTGTGGCAAGTCTGAGTTTGGAAGGCTCTCATA
GACCTTTTTTCAAAGAGGCCACCCTGGTTGTGAATAATTATGTAGTCCAG
CAGAAAAACAATGATAAAACCATGCATAATTATTACAATATGCATGATAC
AGTAATTATGCATGGCTCTATCATTGTTTTTATGGCTGGACTACATAATT
ATTCAACAGGACCTCCTCTTTGAAAAAAGGTCTATTCAAGCAAATGGACT
TTAGCAGTGCAGAGCCAAGTTACCAGTGCAAGAACGGCCCCAGTGCAGGA
ACAAACACACGTGGAACCTGAAAAAAACAACTAAAAACAAACTTCTACCG
TCAACTGCTCTAACTTGGAACGATTGGTTGAAACATGGAACTGGTTGATC
ACAGATGTTACGCGAGGTAATCGTCACAAGCCAAAATCCATGTTCAACAG
ATTTTGAAAACAAAAGTGTAAAGAATAAACATTGCTGTAAACGCGTTTAA
AACCGAGGGTTTAAATATTTACTTTACTAAAGGCATATTTCGCTGAAAGA
AAATATATAGCTTTAATGAAACAAATTTTGGTTAAATATCTTTGTTATTA
TATAAAACCTGAATCTAAATGGTTTTGAGAAGTAAAAGATTGTACGACTT
CAAAACACCTTAAGGTTACAGATCAATTTGATTATTTTTAAATTTTTATC
ATTAATTGTTTAGCATACTTTCTTTGATGAAATTGGACTGGAGTGGTTAA
AGTGCAATTCAATGGCTTTCTAAATATGTAATTACTTTTTCGACATATTT
TTCTAATTTGGAATTATGATGCGATTTCAAAAGACAAACTTTGAACTTTG
ACGAGTTACTCTTCAAAATCTACTGAATATTTTTCAATGAAACCTTTTGT
ATTCAAAAGCCCTTGTTCTCCCCTACAAAACCGTGCCCCGCTTTATCATT
TACACGCCCCATTCAAAAGATATTTAACTTTTCATGTTATGTGATGCTAA
AAAACAGGTTTTTCACGTTTAAAGCGAGTTTTCTCCACAACAAAACCTCA
AATCAACAATCGGAGGCATGGTTTTGCTATTCAACCTTTTCTGAATAGAA
TGACGTAGGTTTCAGAAATATCGACCAACCAGATCTTGTAGAGTAACCTT
TCAAAGTTGGTATGTACACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGCTCAATCA
ATAGGGATTATACATCGATAATGTTTTTAGCATTTTTTGCAATTTTGATA
CACTTTTAGGTTTAGGGAGATGCATCATTCGATGGTGCGTAAAATTTTGA
ATATTTTAATTTTGGCGGGCAGCAAAAATCCTAAAAAATTTAAATTTTGG
CGAGAACTTATTTTGGCGAATGGTGGAATTTTTTAATTTTGGCGGGAACT
AAATTTTGGCGAATGACAGCGTAAATCTGTTCTATTTTGCCTTATTTTGA
GCAACTTTGATGAATTTCAGGTTTTATTTTGGCAAGAAAACAAAAAAATT
AATTTTGGCGGGAACTTATTTTGGCGGGAACTTATTTTGGCGAGCGAGCA
AAATATTTAATTTTGGCAGGAACTAATTTTGACCAATTTTGCCTAAATTG
GCCAAATCCGCCAAAATTAGTTCCCGCCAAAATAAAAGTTCCCTTAAGAC
AAAGATTGTTTATGACCCCTGTCTCAGATGAGGTTTTCAGGCTTTATCTA
AAGATAGAGAACTAAAATAAGCTTGACCCACTAAACTATATATTCAGCAC
CAGACTCTCTGACATTCTGAGAAATTATTTGCCCGGGAAGAGCAGCAGAT
TTCAGCGAAATGCTGCTTTTTGCTCTAAATTTTTTGATGATAGCTTCACT
CAATCACTTACAATGAGCCTTTGAAATTTGTTTATTCACTCGCCGCGCGA
GTGACGTCAAACGCTCCATCATTTTCAGTGTAGCCGGAACCTCGATATTC
CAGGATTATAAAAAGCTATACCTGTTATCTTTTTTCTTTAAAGAATCAAC
AAGCTATCAACATCGATAAATTACACACATTTACTCAGAAACTTTTCCCA
AGGGTTTGAAGAAAAAAAAACAGGACTGCTATCATTTGTTTTTTATTTAA
CCAGATATTTAAATTTGGGCTCAAAAATACTTGAATAGATAAGTTAATAA
TATTCATTATATAATTTGTATCTCTCAAAAAATAAACACTTACACGACAG
AACGACATCTTTTATCATTTGGAATACCCCCGTATTTGGACCATTCTATG
GTGGGCGCAAAATAGGGCGGAAACTAAGTAGCACCCTCAGTGCAAGATTG
CCGCCGCACCTTTATTCGCCCGCGCAAGAATGCGAGCTAATCATTTTTTT
CTCGCGCGCTCAAGGGGAAAAGGAAAGTGATCGATATTCTTTGAAGGAAA
AACGTCAGAAACAAACTCAATTTCATTTTATTTTAAAAATCTCTTCTTCA
TCTGCTAATCAGTGTTAACTCTCTCCCTCCTACAACAAGATTGCTACCGT
GAGTGGTCCTAAATCCGACAGCCCTGCCTAAATCCGACCCCCCAAATAAC
TGCTATGAAAAAAATTCTATGTTTACAAACATTCCCTCTCCAAGTTGAAC
AATAAACTATTGCAAGAACTCTTGAAACAAAACATTTAACAAGATGACTA
TAATGTCAAGATGTCAATTAATGTGATCAAAAAAGTGTGAGTTGTAAAAA
TAATTACCTCTATTATTCTGAGCGCTGTTTAAAACGTTAACAATTTTGTA
ATAAAAAATTATGTTTTGTATAGAAGCAATTATTGTTATTTGGTTCAATT
GGTTCAGTGTATCAAATTTCTCAGTTTAGTTGACACTTTGGTATCTTCAT
TGCGTCACAGAGAAGGATTTGTTTTTATTTTAGTTTCTATCTTTGAAAGA
CCCCATCGGATTTAGGCAGGGCTGTCGGATTTAGGACCACTCACGGTATA
TAGTTGTGACTAAAGAACAAATTTATTTTAAGCAGTTTTATGATAACCCT
GTGTGTGTATGTAACAGACAGACAGGCATTTTTCCCTCAGTACAGCTCTA
ACTTTTCATACAAAATCAACGGGAAACACATTACTTGGACTTTGTATCTA
ATGCTGTATGTAACCAATCAAAGCTAAAGTCCCAGCAGAGTGAAATCAAA
TCAATGATGACAGTGCCTTTAATAATCTTTTTACATCTTTAACAAATTTA
TGCTTGCCAGTGTACTATATAGTTTTGATTCCCAATGAAGAATCGCATTC
TGTTTTCCATGTTAGAGGGGGGGGGGGGGGGCCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAAACTTATTTTTCACTTTTCTCACTTAC
TTTTGGTTTTTACATAAATCCTTTTTGACCATCTCGTAGACAAGCTTGAA
GTCCTTCTTTCAGTTTGTTTTCACTTTTTTACTTGAAAGCTTCTTGCAAA
ATTTTGAACCAAAATAAAATTTAAAAAGGATGCGCTATCAGTGAAAGTTA
TCGTCATGTTATGACAGAAAGTATGATTGATAAACTTGGTGGAGTTATCA
AAGCAAATTTGTTGTCTCCTTCGCCTGTTCGAAATCTCTATTCTAAAAAA
GATTGGTTTTGTGGTATTTGAATGCTTTATATTTGTACTTGTTGCTTATT
TTGGTCTGTTTATCTCAAACTTTTTTTTCAAAAAAAGTGAAATACATACC
ATGCAAGGCTTGATCCTTTGGTCACCCTAATTCATATCTTTGTAGAGTGT
CTAGTTATATTACCGTAAATACCTTAACTATACTTGTCTTTAGTTAGCTT
TATTCTCAAAATGATTTAACACCAGTATTGCAATTTCAATTTTAGTGTAG
AATATTATATGTTAATATGAAGACTTGGGCTATAATTACTGGAGCAGGAA
CTGGAATTGGGGCAGCCTTGGTAAAAGAACTTTCAAAATTGAATTCATTT
AGTATTCTAGCCTTAGGGAGACGAATTGCTCCTCTAGAAAAGACAAAATC
AGAATGCGAAAATAAGGATCAAGTAACAGTTATATCTGCTGACATCAGCA
AAAATGATGATCTCCAAAAAATCAAATCAATAATTTCTCCAGAAGACAAT
GTCAAATTTTTGGTACAAAATGCAGCTGTCGGTTTACCTGACAAACTGAT
GGATATCAAAAGAGAAGATTTCGAATATGCACTTGCAGTCAATGTGACTG
CTCCTTTGCTTTTATCTCAAATGTTTTTACCACAGTTATCCAAATGCAAA
GGAAGAATCATTCATATTGGAACAGGAGTTGCTTTCAATCCTCAGGTCGG
AACTTCGACTTATGGTATAACTAAAATGGCTTTCCATCGTTTATATACTC
AACTTCAAGTTGAATTGAAAGGCACAGGTGCACAAATTGCCATGGTTCTT
CCTGGAGTTGTTGATACCGAAGGCTTGTGGGATCATTACGATTTAGCCAA
AAAACAAGAGTTGCCCCATACAGCATATTTTGATCAGGTCAAACGAGAAG
GGAAAATATTGTCTTCAGAGGCTTCAGCTAAATTCTTAAAATATGTCATG
TGTGACACAAGTGAGGAAGACTTCCCCAAAGAATGGAATGCCAATAACGA
AAGCCTGTGGTCACTTTGGAAAAATTAAGTCATATGTTTGAAGAAAAAAA
CAAAAAATTTTTTAATGACATGTAGGTGGAGCATAGTATTTCCATTTTTT
TTTTAATTCTATAGATTAATTTTTGTATATTTTTAGGAAAAAAGGACTAT
TTCAAATAAAATTGATTATAAATATTTTGATGGAGAACAAAACTGATTGA
ATATAGTTTGATTTGTGTTGGGAAAATGTCCATATTAAGATAGACACAAA
AAATAGTAAGTACCCA

Coding sequence (CDS) from alignment at sc0000011:244016..253431-

>TCONS_00001650 ID=TCONS_00001650|Name=TCONS_00001650|organism=Clytia hemisphaerica|type=CDS|length=762bp|location=Sequence derived from alignment at sc0000011:244016..253431- (Clytia hemisphaerica)
ATGAAGACTTGGGCTATAATTACTGGAGCAGGAACTGGAATTGGGGCAGC
CTTGGTAAAAGAACTTTCAAAATTGAATTCATTTAGTATTCTAGCCTTAG
GGAGACGAATTGCTCCTCTAGAAAAGACAAAATCAGAATGCGAAAATAAG
GATCAAGTAACAGTTATATCTGCTGACATCAGCAAAAATGATGATCTCCA
AAAAATCAAATCAATAATTTCTCCAGAAGACAATGTCAAATTTTTGGTAC
AAAATGCAGCTGTCGGTTTACCTGACAAACTGATGGATATCAAAAGAGAA
GATTTCGAATATGCACTTGCAGTCAATGTGACTGCTCCTTTGCTTTTATC
TCAAATGTTTTTACCACAGTTATCCAAATGCAAAGGAAGAATCATTCATA
TTGGAACAGGAGTTGCTTTCAATCCTCAGGTCGGAACTTCGACTTATGGT
ATAACTAAAATGGCTTTCCATCGTTTATATACTCAACTTCAAGTTGAATT
GAAAGGCACAGGTGCACAAATTGCCATGGTTCTTCCTGGAGTTGTTGATA
CCGAAGGCTTGTGGGATCATTACGATTTAGCCAAAAAACAAGAGTTGCCC
CATACAGCATATTTTGATCAGGTCAAACGAGAAGGGAAAATATTGTCTTC
AGAGGCTTCAGCTAAATTCTTAAAATATGTCATGTGTGACACAAGTGAGG
AAGACTTCCCCAAAGAATGGAATGCCAATAACGAAAGCCTGTGGTCACTT
TGGAAAAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000861XLOC_000861Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001650-proteinTCONS_00001650-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001650-exon-sc0000011-1575043694:253403..253431TCONS_00001650-exon-sc0000011-1575043694:253403..253431Clytia hemisphaericaexon
TCONS_00001650-exon-sc0000011-1575043694:244016..245031TCONS_00001650-exon-sc0000011-1575043694:244016..245031Clytia hemisphaericaexon
TCONS_00001650-exon-sc0000011-1510915933:253403..253431TCONS_00001650-exon-sc0000011-1510915933:253403..253431Clytia hemisphaericaexon
TCONS_00001650-exon-sc0000011-1510915933:244016..245031TCONS_00001650-exon-sc0000011-1510915933:244016..245031Clytia hemisphaericaexon
TCONS_00001650-exon-sc0000011-1491911889:253403..253431TCONS_00001650-exon-sc0000011-1491911889:253403..253431Clytia hemisphaericaexon
TCONS_00001650-exon-sc0000011-1491911889:244016..245031TCONS_00001650-exon-sc0000011-1491911889:244016..245031Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:244016..253431 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.58183	1.10327e-05	0.00404593	1.91917e-08	12.0817	0.00772343	19.4469	6.74021	1.15607	4.23237e-09	3.84595	0.00175333	0.000568832	6.33355	2.46815e-10	1.52828e-06	1.71649	2.39977	0.00741694	0	1.9723e-05	0.0160842	6.65735e-06	0	3.70598	1.84683	3.40337e-09	6.34663	2.65858	2.04106e-05
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001650 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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