XLOC_000861 (gene) - C. hemisphaerica

Overview


Name	XLOC_000861
Unique Name	XLOC_000861
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000011:244010..253436-

gene from alignment at sc0000011:244010..253436-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_000861 ID=XLOC_000861|Name=XLOC_000861|organism=Clytia hemisphaerica|type=gene|length=9427bp|location=Sequence derived from alignment at sc0000011:244010..253436- (Clytia hemisphaerica)
TACGTAGCAGACTACAAAGTGAAGCGTTTGCTTGGTAAGACTTTTTTCAA
TGCTTTCTTATTGCACGTTGTATTACAGGGTTCAGACAGACCCTGGAAAA
CCTGTAAAACCTGGAAATATGATAAATTTTCAGAAAAATCAGGGAAACTC
AGGGAAACCCAGGGAAAAAAATTTTTTTCCCAGTCTGCTCAGGGAAACTC
AGGGAATTTTATTTTTTGAAGAATGAATGGAAAAAAACAGATTTACTAGC
CGTATTGTATAAGGGTTGCGAAGCGATCCAGACTCCACCTCAATTCGCAA
GTTGCTAGCAAAATAAGAGACACTCTAAAAATCCCTCTAATAAAAAAAGC
CGCTATAGAGACAGGGTCCTAAGCTAAGAGCCTTAATGCCCCAAACACAC
CACATAATCTACAGAGGCACAACACCCGCCCCCGCCCGCCGCGCATTGCT
CTTTTTTTTCCTTCTATTTATGGCCGATGAAAGTCACATGTGAGTTTACC
GTCGGCCGCCCGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTGGGAAAATAATGAATAATGAATAATGAAATCATGCCG
CATCTATTTTCGGGTAAGTTGACGACGGTAAACTCACATGTAACTTACAT
CGGCCTATTCTAGTGTAAATGGTGCCTTAATAAAATCGAACGATATTAGT
CGAACGATCGAACATTTTTATTCGAATCACGAATCGTCTTTCGAAATCAT
CAAAACATAAAAATAAAACAAAAACAAAAATGTAAAAAGATGGCTTGTTG
GTTCTTGGCTTTGGGCAGTTTTGATTTATTTCTTGACAAATTATTGACAA
ATTTGATTACGNNTAACAGCAAAATAAACATTTAAAACCGAAGAACCACT
GCTTAGATTGCTTAGATGCGTGCCGCCCGCGCGGCAATTTGATCAACTTC
AGATTCTAAGTACATGTTTCGGCTTCCGGTAATTTTGTTGCTGTTCACTG
TTAGGGTACACCATTTTAAAACGGCATTTTTCGCAGTCCTAGCTACCAAA
CCGAGAAAGTTTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAG
CCAAACCATTCAAGGTCATTTTGATAAAATCATCGGTTTGGAGATGTGAT
TTATATAGCAAATTTTATAGCAAATTTTCGCTTGGGATAGAAGTTAAAGG
TAGGTGCACAATATAGCAAAACTGCTTCGCTCATAAATTCGCTTCGCAAA
AAGTTTTTTTAGTTTTAAAGTGTTTATTCATATTATGCAGTATTTGTAGC
TTTAATTTTTACCTTAGGTTTACCATTTGATTTGTGTGCCTTTTGTTTAA
AGATACATCTCTTTTGACTCTGCTTAGTTTTTATGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTGAAA
GTTTGTCTCGGCCTTTTTATAATGAGCGAGACATACGTTCTCTGATTACG
CAATTTTCATATTGACATTTTCGAGGCATTTTGATGTAACTGCCTGTATT
ATATTTTATTAGTTTGAAATCATTTATGGGGAGTTCTCGGAAGTTTGACA
GCATCACTTATATATCCAGCTTTATATGATAGCTAATAGGAAATATGACG
GTTGGCAAACAATATCATACTCCAGGATGCAAGTGAAATTTTTCAATCCG
CGGACGTAGACGGGGGTTCGGTTATTATCAGTTAGGGTTTTAGGGTTGGA
GCTCGAGAGTCACAATATAGGTTGGCAGACGATATCATCCACACCAGGAT
ACAAGTGAAATTTTTCAATCTGCAAACCTAGACGGGGTTCGGTTATTATC
AGTTAGGGTTAGGGTTGGAGCTTGAGAGTCACAATATAAGGCCGAAGGCC
TTCTTAGGGGCATCCGTACCCTGTGACCTAACTTAGGATCCCGTAGGGAT
CTTTGTAGGGGCACCGGTAGGGTTGGGAGCTTTCTTAATAAAGGTCTGTA
AATTACACGCTATAAGTATTTGTGAGTGACAACCAAGGTTGCTTGCATTT
GGTGGTTCGAGCTGGGGTCGGAGACCAATTTCACTGGTAGGGTCAAATTT
CAGAAAAATACTTAGAAAACAGTTAGAAACACTACAGAAAGTCAGAAAAT
CAGGATAGAAGATAGGAAAGTAGAAAATAGGGGGAAAATAAGAGAGGATG
CATTCTGGTGGATGATATCGTTTGCCAACCCACAATATAAGGCCGAAGGC
CTTCTTAGGGGCATTCGTACCCTGTGACTTAACTTTGGATCCCGTAGGGA
TCCTTGTAGGGGAACCGGTAGGGTTGGGAGCTTTCTTAATTAAGGTCTGT
AAATTACACACTATAAGTATTTGTGAATGACAGTTTTCTGTCGTGTCTCG
TTGGCGCAAGCGGTTAGGCGTTGGGTTTGTAAACCAAGAGGTTGCTTGCA
TTTGGTGGTTCGAGCCGGGGTCGGTGACCTCTTTCTTCACCGGTAAGGGC
AAATTTCAGAAAAATACATAGAAAATTAGTTATTTAATAGGCCATTGCGT
TCTCCAAAACAAGTATATATCAAAAACAAACATGGTAAAGTAACATTTGC
CATGGCATGGAGGAATGAATAATGAACTTCTCTAAATTGATTTTTCTGGT
GAAAATTTCTTTTCCATGAAAGACTGTTAAAAAATTATAACCCCTTCCCC
CTAAACGTCCATTTGACATTTTCTGTGGCAAGTCTGAGTTTGGAAGGCTC
TCATAGACCTTTTTTCAAAGAGGCCACCCTGGTTGTGAATAATTATGTAG
TCCAGCAGAAAAACAATGATAAAACCATGCATAATTATTACAATATGCAT
GATACAGTAATTATGCATGGCTCTATCATTGTTTTTATGGCTGGACTACA
TAATTATTCAACAGGACCTCCTCTTTGAAAAAAGGTCTATTCAAGCAAAT
GGACTTTAGCAGTGCAGAGCCAAGTTACCAGTGCAAGAACGGCCCCAGTG
CAGGAACAAACACACGTGGAACCTGAAAAAAACAACTAAAAACAAACTTC
TACCGTCAACTGCTCTAACTTGGAACGATTGGTTGAAACATGGAACTGGT
TGATCACAGATGTTACGCGAGGTAATCGTCACAAGCCAAAATCCATGTTC
AACAGATTTTGAAAACAAAAGTGTAAAGAATAAACATTGCTGTAAACGCG
TTTAAAACCGAGGGTTTAAATATTTACTTTACTAAAGGCATATTTCGCTG
AAAGAAAATATATAGCTTTAATGAAACAAATTTTGGTTAAATATCTTTGT
TATTATATAAAACCTGAATCTAAATGGTTTTGAGAAGTAAAAGATTGTAC
GACTTCAAAACACCTTAAGGTTACAGATCAATTTGATTATTTTTAAATTT
TTATCATTAATTGTTTAGCATACTTTCTTTGATGAAATTGGACTGGAGTG
GTTAAAGTGCAATTCAATGGCTTTCTAAATATGTAATTACTTTTTCGACA
TATTTTTCTAATTTGGAATTATGATGCGATTTCAAAAGACAAACTTTGAA
CTTTGACGAGTTACTCTTCAAAATCTACTGAATATTTTTCAATGAAACCT
TTTGTATTCAAAAGCCCTTGTTCTCCCCTACAAAACCGTGCCCCGCTTTA
TCATTTACACGCCCCATTCAAAAGATATTTAACTTTTCATGTTATGTGAT
GCTAAAAAACAGGTTTTTCACGTTTAAAGCGAGTTTTCTCCACAACAAAA
CCTCAAATCAACAATCGGAGGCATGGTTTTGCTATTCAACCTTTTCTGAA
TAGAATGACGTAGGTTTCAGAAATATCGACCAACCAGATCTTGTAGAGTA
ACCTTTCAAAGTTGGTATGTACACTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGCTC
AATCAATAGGGATTATACATCGATAATGTTTTTAGCATTTTTTGCAATTT
TGATACACTTTTAGGTTTAGGGAGATGCATCATTCGATGGTGCGTAAAAT
TTTGAATATTTTAATTTTGGCGGGCAGCAAAAATCCTAAAAAATTTAAAT
TTTGGCGAGAACTTATTTTGGCGAATGGTGGAATTTTTTAATTTTGGCGG
GAACTAAATTTTGGCGAATGACAGCGTAAATCTGTTCTATTTTGCCTTAT
TTTGAGCAACTTTGATGAATTTCAGGTTTTATTTTGGCAAGAAAACAAAA
AAATTAATTTTGGCGGGAACTTATTTTGGCGGGAACTTATTTTGGCGAGC
GAGCAAAATATTTAATTTTGGCAGGAACTAATTTTGACCAATTTTGCCTA
AATTGGCCAAATCCGCCAAAATTAGTTCCCGCCAAAATAAAAGTTCCCTT
AAGACAAAGATTGTTTATGACCCCTGTCTCAGATGAGGTTTTCAGGCTTT
ATCTAAAGATAGAGAACTAAAATAAGCTTGACCCACTAAACTATATATTC
AGCACCAGACTCTCTGACATTCTGAGAAATTATTTGCCCGGGAAGAGCAG
CAGATTTCAGCGAAATGCTGCTTTTTGCTCTAAATTTTTTGATGATAGCT
TCACTCAATCACTTACAATGAGCCTTTGAAATTTGTTTATTCACTCGCCG
CGCGAGTGACGTCAAACGCTCCATCATTTTCAGTGTAGCCGGAACCTCGA
TATTCCAGGATTATAAAAAGCTATACCTGTTATCTTTTTTCTTTAAAGAA
TCAACAAGCTATCAACATCGATAAATTACACACATTTACTCAGAAACTTT
TCCCAAGGGTTTGAAGAAAAAAAAACAGGACTGCTATCATTTGTTTTTTA
TTTAACCAGATATTTAAATTTGGGCTCAAAAATACTTGAATAGATAAGTT
AATAATATTCATTATATAATTTGTATCTCTCAAAAAATAAACACTTACAC
GACAGAACGACATCTTTTATCATTTGGAATACCCCCGTATTTGGACCATT
CTATGGTGGGCGCAAAATAGGGCGGAAACTAAGTAGCACCCTCAGTGCAA
GATTGCCGCCGCACCTTTATTCGCCCGCGCAAGAATGCGAGCTAATCATT
TTTTTCTCGCGCGCTCAAGGGGAAAAGGAAAGTGATCGATATTCTTTGAA
GGAAAAACGTCAGAAACAAACTCAATTTCATTTTATTTTAAAAATCTCTT
CTTCATCTGCTAATCAGTGTTAACTCTCTCCCTCCTACAACAAGATTGCT
ACCGTGAGTGGTCCTAAATCCGACAGCCCTGCCTAAATCCGACCCCCCAA
ATAACTGCTATGAAAAAAATTCTATGTTTACAAACATTCCCTCTCCAAGT
TGAACAATAAACTATTGCAAGAACTCTTGAAACAAAACATTTAACAAGAT
GACTATAATGTCAAGATGTCAATTAATGTGATCAAAAAAGTGTGAGTTGT
AAAAATAATTACCTCTATTATTCTGAGCGCTGTTTAAAACGTTAACAATT
TTGTAATAAAAAATTATGTTTTGTATAGAAGCAATTATTGTTATTTGGTT
CAATTGGTTCAGTGTATCAAATTTCTCAGTTTAGTTGACACTTTGGTATC
TTCATTGCGTCACAGAGAAGGATTTGTTTTTATTTTAGTTTCTATCTTTG
AAAGACCCCATCGGATTTAGGCAGGGCTGTCGGATTTAGGACCACTCACG
GTATATAGTTGTGACTAAAGAACAAATTTATTTTAAGCAGTTTTATGATA
ACCCTGTGTGTGTATGTAACAGACAGACAGGCATTTTTCCCTCAGTACAG
CTCTAACTTTTCATACAAAATCAACGGGAAACACATTACTTGGACTTTGT
ATCTAATGCTGTATGTAACCAATCAAAGCTAAAGTCCCAGCAGAGTGAAA
TCAAATCAATGATGACAGTGCCTTTAATAATCTTTTTACATCTTTAACAA
ATTTATGCTTGCCAGTGTACTATATAGTTTTGATTCCCAATGAAGAATCG
CATTCTGTTTTCCATGTTAGAGGGGGGGGGGGGGGGCCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTTATTTTTCACTTTTCTCA
CTTACTTTTGGTTTTTACATAAATCCTTTTTGACCATCTCGTAGACAAGC
TTGAAGTCCTTCTTTCAGTTTGTTTTCACTTTTTTACTTGAAAGCTTCTT
GCAAAATTTTGAACCAAAATAAAATTTAAAAAGGATGCGCTATCAGTGAA
AGTTATCGTCATGTTATGACAGAAAGTATGATTGATAAACTTGGTGGAGT
TATCAAAGCAAATTTGTTGTCTCCTTCGCCTGTTCGAAATCTCTATTCTA
AAAAAGATTGGTTTTGTGGTATTTGAATGCTTTATATTTGTACTTGTTGC
TTATTTTGGTCTGTTTATCTCAAACTTTTTTTTCAAAAAAAGTGAAATAC
ATACCATGCAAGGCTTGATCCTTTGGTCACCCTAATTCATATCTTTGTAG
AGTGTCTAGTTATATTACCGTAAATACCTTAACTATACTTGTCTTTAGTT
AGCTTTATTCTCAAAATGATTTAACACCAGTATTGCAATTTCAATTTTAG
TGTAGAATATTATATGTTAATATGAAGACTTGGGCTATAATTACTGGAGC
AGGAACTGGAATTGGGGCAGCCTTGGTAAAAGAACTTTCAAAATTGAATT
CATTTAGTATTCTAGCCTTAGGGAGACGAATTGCTCCTCTAGAAAAGACA
AAATCAGAATGCGAAAATAAGGATCAAGTAACAGTTATATCTGCTGACAT
CAGCAAAAATGATGATCTCCAAAAAATCAAATCAATAATTTCTCCAGAAG
ACAATGTCAAATTTTTGGTACAAAATGCAGCTGTCGGTTTACCTGACAAA
CTGATGGATATCAAAAGAGAAGATTTCGAATATGCACTTGCAGTCAATGT
GACTGCTCCTTTGCTTTTATCTCAAATGTTTTTACCACAGTTATCCAAAT
GCAAAGGAAGAATCATTCATATTGGAACAGGAGTTGCTTTCAATCCTCAG
GTCGGAACTTCGACTTATGGTATAACTAAAATGGCTTTCCATCGTTTATA
TACTCAACTTCAAGTTGAATTGAAAGGCACAGGTGCACAAATTGCCATGG
TTCTTCCTGGAGTTGTTGATACCGAAGGCTTGTGGGATCATTACGATTTA
GCCAAAAAACAAGAGTTGCCCCATACAGCATATTTTGATCAGGTCAAACG
AGAAGGGAAAATATTGTCTTCAGAGGCTTCAGCTAAATTCTTAAAATATG
TCATGTGTGACACAAGTGAGGAAGACTTCCCCAAAGAATGGAATGCCAAT
AACGAAAGCCTGTGGTCACTTTGGAAAAATTAAGTCATATGTTTGAAGAA
AAAAACAAAAAATTTTTTAATGACATGTAGGTGGAGCATAGTATTTCCAT
TTTTTTTTTAATTCTATAGATTAATTTTTGTATATTTTTAGGAAAAAAGG
ACTATTTCAAATAAAATTGATTATAAATATTTTGATGGAGAACAAAACTG
ATTGAATATAGTTTGATTTGTGTTGGGAAAATGTCCATATTAAGATAGAC
ACAAAAAATAGTAAGTACCCAATCCTT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00001651	TCONS_00001651	Clytia hemisphaerica	transcript
TCONS_00001650	TCONS_00001650	Clytia hemisphaerica	transcript
TCONS_00001649	TCONS_00001649	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00001650-protein	TCONS_00001650-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000011	supercontig	sc0000011:244010..253436 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
98.56	100.7	116.95	126.03	54.77	43.53	28.59	27.99	21.08	21.69	14.58	11.63	9.68	8.38	11.88	15.18	27.38	21.98	5.62	6.32	19.5	19.05	49.7	40.32	15.08	18.31	15.42	11.6	35.24	32.02

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XLOC_000861 (gene) - C. hemisphaerica