Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

XLOC_000861 (gene) - C. hemisphaerica

Overview
NameXLOC_000861
Unique NameXLOC_000861
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:244010..253436-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000861 ID=XLOC_000861|Name=XLOC_000861|organism=Clytia hemisphaerica|type=gene|length=9427bp|location=Sequence derived from alignment at sc0000011:244010..253436- (Clytia hemisphaerica)
TACGTAGCAGACTACAAAGTGAAGCGTTTGCTTGGTAAGACTTTTTTCAA TGCTTTCTTATTGCACGTTGTATTACAGGGTTCAGACAGACCCTGGAAAA CCTGTAAAACCTGGAAATATGATAAATTTTCAGAAAAATCAGGGAAACTC AGGGAAACCCAGGGAAAAAAATTTTTTTCCCAGTCTGCTCAGGGAAACTC AGGGAATTTTATTTTTTGAAGAATGAATGGAAAAAAACAGATTTACTAGC CGTATTGTATAAGGGTTGCGAAGCGATCCAGACTCCACCTCAATTCGCAA GTTGCTAGCAAAATAAGAGACACTCTAAAAATCCCTCTAATAAAAAAAGC CGCTATAGAGACAGGGTCCTAAGCTAAGAGCCTTAATGCCCCAAACACAC CACATAATCTACAGAGGCACAACACCCGCCCCCGCCCGCCGCGCATTGCT CTTTTTTTTCCTTCTATTTATGGCCGATGAAAGTCACATGTGAGTTTACC GTCGGCCGCCCGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNTTGGGAAAATAATGAATAATGAATAATGAAATCATGCCG CATCTATTTTCGGGTAAGTTGACGACGGTAAACTCACATGTAACTTACAT CGGCCTATTCTAGTGTAAATGGTGCCTTAATAAAATCGAACGATATTAGT CGAACGATCGAACATTTTTATTCGAATCACGAATCGTCTTTCGAAATCAT CAAAACATAAAAATAAAACAAAAACAAAAATGTAAAAAGATGGCTTGTTG GTTCTTGGCTTTGGGCAGTTTTGATTTATTTCTTGACAAATTATTGACAA ATTTGATTACGNNTAACAGCAAAATAAACATTTAAAACCGAAGAACCACT GCTTAGATTGCTTAGATGCGTGCCGCCCGCGCGGCAATTTGATCAACTTC AGATTCTAAGTACATGTTTCGGCTTCCGGTAATTTTGTTGCTGTTCACTG TTAGGGTACACCATTTTAAAACGGCATTTTTCGCAGTCCTAGCTACCAAA CCGAGAAAGTTTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAG CCAAACCATTCAAGGTCATTTTGATAAAATCATCGGTTTGGAGATGTGAT TTATATAGCAAATTTTATAGCAAATTTTCGCTTGGGATAGAAGTTAAAGG TAGGTGCACAATATAGCAAAACTGCTTCGCTCATAAATTCGCTTCGCAAA AAGTTTTTTTAGTTTTAAAGTGTTTATTCATATTATGCAGTATTTGTAGC TTTAATTTTTACCTTAGGTTTACCATTTGATTTGTGTGCCTTTTGTTTAA AGATACATCTCTTTTGACTCTGCTTAGTTTTTATGNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTGAAA GTTTGTCTCGGCCTTTTTATAATGAGCGAGACATACGTTCTCTGATTACG CAATTTTCATATTGACATTTTCGAGGCATTTTGATGTAACTGCCTGTATT ATATTTTATTAGTTTGAAATCATTTATGGGGAGTTCTCGGAAGTTTGACA GCATCACTTATATATCCAGCTTTATATGATAGCTAATAGGAAATATGACG GTTGGCAAACAATATCATACTCCAGGATGCAAGTGAAATTTTTCAATCCG CGGACGTAGACGGGGGTTCGGTTATTATCAGTTAGGGTTTTAGGGTTGGA GCTCGAGAGTCACAATATAGGTTGGCAGACGATATCATCCACACCAGGAT ACAAGTGAAATTTTTCAATCTGCAAACCTAGACGGGGTTCGGTTATTATC AGTTAGGGTTAGGGTTGGAGCTTGAGAGTCACAATATAAGGCCGAAGGCC TTCTTAGGGGCATCCGTACCCTGTGACCTAACTTAGGATCCCGTAGGGAT CTTTGTAGGGGCACCGGTAGGGTTGGGAGCTTTCTTAATAAAGGTCTGTA AATTACACGCTATAAGTATTTGTGAGTGACAACCAAGGTTGCTTGCATTT GGTGGTTCGAGCTGGGGTCGGAGACCAATTTCACTGGTAGGGTCAAATTT CAGAAAAATACTTAGAAAACAGTTAGAAACACTACAGAAAGTCAGAAAAT CAGGATAGAAGATAGGAAAGTAGAAAATAGGGGGAAAATAAGAGAGGATG CATTCTGGTGGATGATATCGTTTGCCAACCCACAATATAAGGCCGAAGGC CTTCTTAGGGGCATTCGTACCCTGTGACTTAACTTTGGATCCCGTAGGGA TCCTTGTAGGGGAACCGGTAGGGTTGGGAGCTTTCTTAATTAAGGTCTGT AAATTACACACTATAAGTATTTGTGAATGACAGTTTTCTGTCGTGTCTCG TTGGCGCAAGCGGTTAGGCGTTGGGTTTGTAAACCAAGAGGTTGCTTGCA TTTGGTGGTTCGAGCCGGGGTCGGTGACCTCTTTCTTCACCGGTAAGGGC AAATTTCAGAAAAATACATAGAAAATTAGTTATTTAATAGGCCATTGCGT TCTCCAAAACAAGTATATATCAAAAACAAACATGGTAAAGTAACATTTGC CATGGCATGGAGGAATGAATAATGAACTTCTCTAAATTGATTTTTCTGGT GAAAATTTCTTTTCCATGAAAGACTGTTAAAAAATTATAACCCCTTCCCC CTAAACGTCCATTTGACATTTTCTGTGGCAAGTCTGAGTTTGGAAGGCTC TCATAGACCTTTTTTCAAAGAGGCCACCCTGGTTGTGAATAATTATGTAG TCCAGCAGAAAAACAATGATAAAACCATGCATAATTATTACAATATGCAT GATACAGTAATTATGCATGGCTCTATCATTGTTTTTATGGCTGGACTACA TAATTATTCAACAGGACCTCCTCTTTGAAAAAAGGTCTATTCAAGCAAAT GGACTTTAGCAGTGCAGAGCCAAGTTACCAGTGCAAGAACGGCCCCAGTG CAGGAACAAACACACGTGGAACCTGAAAAAAACAACTAAAAACAAACTTC TACCGTCAACTGCTCTAACTTGGAACGATTGGTTGAAACATGGAACTGGT TGATCACAGATGTTACGCGAGGTAATCGTCACAAGCCAAAATCCATGTTC AACAGATTTTGAAAACAAAAGTGTAAAGAATAAACATTGCTGTAAACGCG TTTAAAACCGAGGGTTTAAATATTTACTTTACTAAAGGCATATTTCGCTG AAAGAAAATATATAGCTTTAATGAAACAAATTTTGGTTAAATATCTTTGT TATTATATAAAACCTGAATCTAAATGGTTTTGAGAAGTAAAAGATTGTAC GACTTCAAAACACCTTAAGGTTACAGATCAATTTGATTATTTTTAAATTT TTATCATTAATTGTTTAGCATACTTTCTTTGATGAAATTGGACTGGAGTG GTTAAAGTGCAATTCAATGGCTTTCTAAATATGTAATTACTTTTTCGACA TATTTTTCTAATTTGGAATTATGATGCGATTTCAAAAGACAAACTTTGAA CTTTGACGAGTTACTCTTCAAAATCTACTGAATATTTTTCAATGAAACCT TTTGTATTCAAAAGCCCTTGTTCTCCCCTACAAAACCGTGCCCCGCTTTA TCATTTACACGCCCCATTCAAAAGATATTTAACTTTTCATGTTATGTGAT GCTAAAAAACAGGTTTTTCACGTTTAAAGCGAGTTTTCTCCACAACAAAA CCTCAAATCAACAATCGGAGGCATGGTTTTGCTATTCAACCTTTTCTGAA TAGAATGACGTAGGTTTCAGAAATATCGACCAACCAGATCTTGTAGAGTA ACCTTTCAAAGTTGGTATGTACACTNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGCTC AATCAATAGGGATTATACATCGATAATGTTTTTAGCATTTTTTGCAATTT TGATACACTTTTAGGTTTAGGGAGATGCATCATTCGATGGTGCGTAAAAT TTTGAATATTTTAATTTTGGCGGGCAGCAAAAATCCTAAAAAATTTAAAT TTTGGCGAGAACTTATTTTGGCGAATGGTGGAATTTTTTAATTTTGGCGG GAACTAAATTTTGGCGAATGACAGCGTAAATCTGTTCTATTTTGCCTTAT TTTGAGCAACTTTGATGAATTTCAGGTTTTATTTTGGCAAGAAAACAAAA AAATTAATTTTGGCGGGAACTTATTTTGGCGGGAACTTATTTTGGCGAGC GAGCAAAATATTTAATTTTGGCAGGAACTAATTTTGACCAATTTTGCCTA AATTGGCCAAATCCGCCAAAATTAGTTCCCGCCAAAATAAAAGTTCCCTT AAGACAAAGATTGTTTATGACCCCTGTCTCAGATGAGGTTTTCAGGCTTT ATCTAAAGATAGAGAACTAAAATAAGCTTGACCCACTAAACTATATATTC AGCACCAGACTCTCTGACATTCTGAGAAATTATTTGCCCGGGAAGAGCAG CAGATTTCAGCGAAATGCTGCTTTTTGCTCTAAATTTTTTGATGATAGCT TCACTCAATCACTTACAATGAGCCTTTGAAATTTGTTTATTCACTCGCCG CGCGAGTGACGTCAAACGCTCCATCATTTTCAGTGTAGCCGGAACCTCGA TATTCCAGGATTATAAAAAGCTATACCTGTTATCTTTTTTCTTTAAAGAA TCAACAAGCTATCAACATCGATAAATTACACACATTTACTCAGAAACTTT TCCCAAGGGTTTGAAGAAAAAAAAACAGGACTGCTATCATTTGTTTTTTA TTTAACCAGATATTTAAATTTGGGCTCAAAAATACTTGAATAGATAAGTT AATAATATTCATTATATAATTTGTATCTCTCAAAAAATAAACACTTACAC GACAGAACGACATCTTTTATCATTTGGAATACCCCCGTATTTGGACCATT CTATGGTGGGCGCAAAATAGGGCGGAAACTAAGTAGCACCCTCAGTGCAA GATTGCCGCCGCACCTTTATTCGCCCGCGCAAGAATGCGAGCTAATCATT TTTTTCTCGCGCGCTCAAGGGGAAAAGGAAAGTGATCGATATTCTTTGAA GGAAAAACGTCAGAAACAAACTCAATTTCATTTTATTTTAAAAATCTCTT CTTCATCTGCTAATCAGTGTTAACTCTCTCCCTCCTACAACAAGATTGCT ACCGTGAGTGGTCCTAAATCCGACAGCCCTGCCTAAATCCGACCCCCCAA ATAACTGCTATGAAAAAAATTCTATGTTTACAAACATTCCCTCTCCAAGT TGAACAATAAACTATTGCAAGAACTCTTGAAACAAAACATTTAACAAGAT GACTATAATGTCAAGATGTCAATTAATGTGATCAAAAAAGTGTGAGTTGT AAAAATAATTACCTCTATTATTCTGAGCGCTGTTTAAAACGTTAACAATT TTGTAATAAAAAATTATGTTTTGTATAGAAGCAATTATTGTTATTTGGTT CAATTGGTTCAGTGTATCAAATTTCTCAGTTTAGTTGACACTTTGGTATC TTCATTGCGTCACAGAGAAGGATTTGTTTTTATTTTAGTTTCTATCTTTG AAAGACCCCATCGGATTTAGGCAGGGCTGTCGGATTTAGGACCACTCACG GTATATAGTTGTGACTAAAGAACAAATTTATTTTAAGCAGTTTTATGATA ACCCTGTGTGTGTATGTAACAGACAGACAGGCATTTTTCCCTCAGTACAG CTCTAACTTTTCATACAAAATCAACGGGAAACACATTACTTGGACTTTGT ATCTAATGCTGTATGTAACCAATCAAAGCTAAAGTCCCAGCAGAGTGAAA TCAAATCAATGATGACAGTGCCTTTAATAATCTTTTTACATCTTTAACAA ATTTATGCTTGCCAGTGTACTATATAGTTTTGATTCCCAATGAAGAATCG CATTCTGTTTTCCATGTTAGAGGGGGGGGGGGGGGGCCNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTTATTTTTCACTTTTCTCA CTTACTTTTGGTTTTTACATAAATCCTTTTTGACCATCTCGTAGACAAGC TTGAAGTCCTTCTTTCAGTTTGTTTTCACTTTTTTACTTGAAAGCTTCTT GCAAAATTTTGAACCAAAATAAAATTTAAAAAGGATGCGCTATCAGTGAA AGTTATCGTCATGTTATGACAGAAAGTATGATTGATAAACTTGGTGGAGT TATCAAAGCAAATTTGTTGTCTCCTTCGCCTGTTCGAAATCTCTATTCTA AAAAAGATTGGTTTTGTGGTATTTGAATGCTTTATATTTGTACTTGTTGC TTATTTTGGTCTGTTTATCTCAAACTTTTTTTTCAAAAAAAGTGAAATAC ATACCATGCAAGGCTTGATCCTTTGGTCACCCTAATTCATATCTTTGTAG AGTGTCTAGTTATATTACCGTAAATACCTTAACTATACTTGTCTTTAGTT AGCTTTATTCTCAAAATGATTTAACACCAGTATTGCAATTTCAATTTTAG TGTAGAATATTATATGTTAATATGAAGACTTGGGCTATAATTACTGGAGC AGGAACTGGAATTGGGGCAGCCTTGGTAAAAGAACTTTCAAAATTGAATT CATTTAGTATTCTAGCCTTAGGGAGACGAATTGCTCCTCTAGAAAAGACA AAATCAGAATGCGAAAATAAGGATCAAGTAACAGTTATATCTGCTGACAT CAGCAAAAATGATGATCTCCAAAAAATCAAATCAATAATTTCTCCAGAAG ACAATGTCAAATTTTTGGTACAAAATGCAGCTGTCGGTTTACCTGACAAA CTGATGGATATCAAAAGAGAAGATTTCGAATATGCACTTGCAGTCAATGT GACTGCTCCTTTGCTTTTATCTCAAATGTTTTTACCACAGTTATCCAAAT GCAAAGGAAGAATCATTCATATTGGAACAGGAGTTGCTTTCAATCCTCAG GTCGGAACTTCGACTTATGGTATAACTAAAATGGCTTTCCATCGTTTATA TACTCAACTTCAAGTTGAATTGAAAGGCACAGGTGCACAAATTGCCATGG TTCTTCCTGGAGTTGTTGATACCGAAGGCTTGTGGGATCATTACGATTTA GCCAAAAAACAAGAGTTGCCCCATACAGCATATTTTGATCAGGTCAAACG AGAAGGGAAAATATTGTCTTCAGAGGCTTCAGCTAAATTCTTAAAATATG TCATGTGTGACACAAGTGAGGAAGACTTCCCCAAAGAATGGAATGCCAAT AACGAAAGCCTGTGGTCACTTTGGAAAAATTAAGTCATATGTTTGAAGAA AAAAACAAAAAATTTTTTAATGACATGTAGGTGGAGCATAGTATTTCCAT TTTTTTTTTAATTCTATAGATTAATTTTTGTATATTTTTAGGAAAAAAGG ACTATTTCAAATAAAATTGATTATAAATATTTTGATGGAGAACAAAACTG ATTGAATATAGTTTGATTTGTGTTGGGAAAATGTCCATATTAAGATAGAC ACAAAAAATAGTAAGTACCCAATCCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001651TCONS_00001651Clytia hemisphaericatranscript
TCONS_00001650TCONS_00001650Clytia hemisphaericatranscript
TCONS_00001649TCONS_00001649Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001650-proteinTCONS_00001650-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:244010..253436 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
98.56 100.7 116.95 126.03 54.77 43.53 28.59 27.99 21.08 21.69 14.58 11.63 9.68 8.38 11.88 15.18 27.38 21.98 5.62 6.32 19.5 19.05 49.7 40.32 15.08 18.31 15.42 11.6 35.24 32.02