TCONS_00001370 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001370
Unique NameTCONS_00001370
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1957

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001370 ID=TCONS_00001370|Name=TCONS_00001370|organism=Clytia hemisphaerica|type=transcript|length=1957bp
tcTAATGTCAAACAGGAACTATAGTTCCAGTTTCTGTGtattttaatgtc
aaataaCACTTTAATTTGTAGATCAGCAAAATGtaaaactctaaaaatat
taaacataTCTAAAACGatgtcaaaaacaatttttattggTGTTGCTGCT
GTAGTAATTgctggcattttttatttttacaacaCTTATGATCTTGGTGT
TAACTCTTTTAGCAGTGAAAAAGATAAACCTGTAGCCACTTTGAAAAGCG
TGCAATATTCAATGATGGGTAACAAATCTACAACAGCTTGTAAAGATTTT
TCTGTCTTAACATGGAATGTATGGTTTGGTACTGGCCAGAAATGGGATGC
ACCGGCAAAAAGATGGGTAGAGCTGTTGCATATTGTGGTTGGCAAAAAGC
CAGATGTTATTGGATTTCAGGAATGCACTGCTGACTTCTTGAAAATTGTA
CAAGGACACACagaattttcaaatctttatgTTGCACTCAATGACAAACC
TGCTCATTCAAGATACTTTGTAATGATTTATAAAAGGAAAGAATTGAAGA
CTTTGAAGAAAGATACAATTACTTTCAAAACACAACATGATAGAAGATGT
GAATATTTGGATGTCGAAAAAGAAGGAGCTAAATTTCGCTTTGGTACTGT
TCATATCGAGTCCTATGTCACATCACCAAATATCAGGGAAATTCAAATGG
GAGCCATATTTGATGTTTTACAAGacaaaaaagctaagaacaaaGAGCTT
GCTTTTTTGGTTGGTGATTTCAATTTCCATGAAACAGACAAAGAAAATAA
GTTTATAGAGACCAGTCAATTTAAGGATACATGGCGGGTTGTCCATAAGG
AGGCACCTGGATATTCTTTTGAGTCCAAACATAATTTGATGAATCAACAT
GCAATGCTTGTTGGAGAAGGCATCTCCACTCCAACTTTCTTAAGattcaa
aaaaacttttatcaacaaaaagaaagaaaaacaaacaaacacatcAAAAA
ATGGTGTTAGGAAATTGGACATTGACCGAAGCAGTTGACCAGACAGCTTt
ctttgaagaagaagaagaaaatcaatatgAATGCGAAGATGAAGAAACTA
GAACACAATATCAATTTCATTTTATGGATAACCACGATACCAAAAGTTTT
GAAGCTGACGAGCTCATTATTTGCATTGGCAGCGGAAACGCTTTCATTGA
AACTTACACAAACATGGGTGACAGTCAACACATAGCCTCATATCTCCAAT
CTAAAAGCGACTCTGATTCATCTCATAATAAGAGCAGTAAAAAGAACTCT
TGTCATGTTTATAAAAGCCTAAAGACATTGATATGCAGCCTGAAGTATCA
CATTGAACCGAAAGACCTTCACAATTGGACATCAACGTTACTGCAAAATA
TAAATGTCAACAATATCAAAGTACTTTGTCAATCACCCAAGTATTTACTG
CGGAATCAAAGAGAGTCTGACCATGGCGATGTAAATGATGTTGACGTACT
GAGGTGTTTGTCGTGTCATGCTGAAAGAATGGAAAGTCCCTCGAAAGTGA
AAGTTctggaaaatcaaaatattattaaaGATTTGCCAGCAGCAGtgTTC
AACTACTGTTCAGCGTACGAGAAATCGTGCACCCTTTACATAGCATACAC
TGAATCGCACTTCGTTGACGTCTTCACGTTGAAATGTTTTGAACCTCTTC
TTAAGGAAGTTACTTTATCAAATCAAGTTTCGGATAGTGTTTTGGCTACA
AGGctgaaaaattttgaaggttATGGTGTCTCTAAtaatgtttatatttg
atatGATTTGTAAATAAGTGAAATAGAACTGTAAATTTCATCTGTCTTTA
GATAGTGTCCATACTGTTTAATACCTGACTTTTACCGTTTCGTACCCTGT
TGTTTCGAGTGTATGACAATATAAATCTCTTatgaattcctcgagggaat
tctattg
Run BLAST on NCBI

protein sequence of TCONS_00001370-protein

>TCONS_00001370-protein ID=TCONS_00001370-protein|Name=TCONS_00001370-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
MSNNTLICRSAKCKTLKILNISKTMSKTIFIGVAAVVIAGIFYFYNTYDL
GVNSFSSEKDKPVATLKSVQYSMMGNKSTTACKDFSVLTWNVWFGTGQKW
DAPAKRWVELLHIVVGKKPDVIGFQECTADFLKIVQGHTEFSNLYVALND
KPAHSRYFVMIYKRKELKTLKKDTITFKTQHDRRCEYLDVEKEGAKFRFG
TVHIESYVTSPNIREIQMGAIFDVLQDKKAKNKELAFLVGDFNFHETDKE
NKFIETSQFKDTWRVVHKEAPGYSFESKHNLMNQHAMLVGEGISTPTFLR
FKKTFINKKKEKQTNTSKNGVRKLDIDRSS
Run BLAST on NCBI

transcript from alignment at sc0000010:695349..702997+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001370 ID=TCONS_00001370|Name=TCONS_00001370|organism=Clytia hemisphaerica|type=transcript|length=7649bp|location=Sequence derived from alignment at sc0000010:695349..702997+ (Clytia hemisphaerica)
tcTAATGTCAAACAGGAACTATAGTTCCAGTTTCTGTGtattttaatgtc aaataaCACTTTAATTTGTAGATCAGCAAAATGtaaaactctaaaaatat taaacataTCTAAAACGatgtcaaaaacaatttttattggTGTTGCTGCT GTAGTAATTgctggcattttttatttttacaacaCTTATGATCTTGGTGT TAACTCTTTTAGCAGTGAAAAAGATAAACCTGTAGCCACTTTGAAAAGCG TGCAATATTCAATGATGGGTAACAAATCTACAACAGCTTGTAAAGATTTT TCTGTCTTAACATGGAATGTATGGTTTGGTACTGGCCAGAAATGGGATGC ACCGGCAAAAAGATGGGTAGAGCTGTTGCATATTGTGGTTGGCAAAAAGC CAGATGTTATTGGATTTCAGGAATGCACTGCTGACTTCTTGAAAATTGTA CAAGGACACACagaattttcaaatctttatgTTGCACTCAATGACAAACC TGCTCATTCAAGATACTTTGTAATGATTTATAAAAGGAAAGAATTGAAGA CTTTGAAGAAAGATACAATTACTTTCAAAACACAACATGATAGAAGATGT GAATATTTGGATGTCGAAAAAGAAGGAGCTAAATTTCGCTTTGGTACTGT TCATATCGAGTCCTATGTCACATCACCAAATATCAGGGAAATTCAAATGG GAGCCATATTTGATGTTTTACAAGacaaaaaagctaagaacaaaGAGCTT GCTTTTTTGGTTGGTGATTTCAATTTCCATGAAACAGACAAAGAAAATAA GTTTATAGAGACCAGTCAATTTAAGGATACATGGCGGGTTGTCCATAAGG AGGCACCTGGATATTCTTTTGAGTCCAAACATAATTTGATGAATCAACAT GCAATGCTTGTTGGAGAAGGCATCTCCACTCCAACTTTCTTAAGGTTAGA TAGAATTTTGTTTTGGCAAGATGATACAAAGGTATGGAAACCTACCCATA TTGAACTTCTTGGACAGAAATCATTTGATGAAATCATGTTAAAGGATGGC ACTAAAGTACCATTGTTCCCTTCAGATCACTATGgtttattttcaagatt tgagCTAATTGCTGATTAATTTGTTGGATAATATTTTTTCACTATAGATC TTATTGGAGTtgattgatttttctaaaaaagtgatgcattgtgggattct TTCGGGattattacaatagaattccctcaagaaattcctaagagatttct attgtaatattcctaaaacaatcccacaatgcatcgcttttttagaaaaa tcaaaaactccgctAAGGTCTGTTGAACTTTTCACCGTTTTCATGtatat ttgaaatcattttttggGGGGTCGTTATTGATTTTATCTTTTGTCTGTAT TCTTAAGAGCAGTGGAAAATGGTTCAAACTGTGGTCAATGAATCTACAAA GTTAAAAATTAGCTCAACAAACAGATTTTTACTCTCGACTTCGTTATGTT ATCTTCTTTGTTACGTGGTTGCACTAATGAAATTATAGTAATTAATTtaa atttgtaaattatttgataaaattttatggTTTTGTAGAGTATATACACG ATTATTTAGgggattgttttctttttaatttatatTACAATTATAAATCA AGTATTAGCAAAACATCTCAACTTACTCATTGAAAACTCTTCTTTTCGcc atttcatttctttttttgaataaatggttttaatttcacttttgcggaTA TGTTTTTGCATAAAATAGCTATCGATCCCTAAGGGTGAGGAGGCTGGGTA AAACAGTAAGAAGTTGGGTTAATGTCAATCATCTGAAATTTTTACATTGA TTTTCTTACagatagaaatattttgaaaacatttttttttaataaactaa AATAAATGATTGAAAGGATGTCACAGGGCCTTAGCTCATTATTTCGGTAA ACTTGATCCAAACCCTTTGTGGTGTTAAGGGTTCATAGTTATTTCTAGAA TTTTGGTTTGGTTTTCTTCTaatgaatttttgtttacatgAATGGAATCT TTCTTTGGAACCTTgcttttaaacctaaaaattgtAGATATACTCCTGTT ATTTTTTACTTATAGAGTTCTAGATAAAAAGTATTAATGTTAAAATCTAA TGGGAAATACCTCTTCGGAAAATACATGCACTGAGCTCTCAGTTTTATCC TGGAATATTTGGTTCGGTACAAGCCAGAAGCTTGACCAGCCAGAGCAAAG ATGGACAGAATTACTCAACATTGTTGTCAATAAGAACCCTGACTTAATTG GTCTTCAGGAATGCACTTTAGATTTCttaaaagttgtcaaaaaacATTCC AGATTCTCTGATCATTACGTTGTTGTCAATGAGAGACCTTTATATTCCAA CTATTTTGTTATgctttacaaaaagaaagatttgaaaatcttAAAGAAAG GGACAATCAAATTGAAAACGACTTTGGAAAGACAATGTGAATATATGGAT GTCGAAAAAGAAGGAGCTAAATTTCGTTTTGGTACTGTTCATATCGAGTC CTATGTCACATCACCAAATATCAGGGAAATTCAAATGGAAGCCATATTtg atattttacaaaagaaaaNATGTCAATCATCTGAAATTTTTACATTGATT TTATTACagatagaaatattttgaaaacatttttttttaataaactaaAA TAAATGATTGAAAGGATGTCACAGGGCCTTGGCTCATTATTTCGGTAAAC TTGATCCAAACCCTTTGTGGTGTTAAGGGCTCATAGTTATTTCTAGAATT TTGGTTTGGTTTTCTTCTAgtgaatttttgtttacataaaTGGAATCTTT CTTTGGAACCTTgcttttaaacctaaaaattgtAGATATACTCCTGTTAT TTTTTACTTATAGAGTTACAGATAAAAAGTATTAATGTTAAAATCTAATG GGAAATACCTCTTCGGAAAATACATGCACTGAGCTCTCAGTTTTATCCTG GAATATTTGGTTCGGTACAAGCCAGAAGCTTGACCAGCCAGAGCAAAGAT GGACAGAATTACTCAACATTGTTGTCAATAAGAACCCTGACTTAATTGGT CTTCAGGAATGCACTTTAGATTTCttaaaagttgtcaaaaaacATTCCAG ATTCTCTGATCATTACGTTGTTGTCAATGAGAGACCTTTATATTCCAACT ATTTTGTTATgctttacaaaaagaaagatttgaaaatcttAAAGAAAGGG ACAATCAAATTGAAAACGACTTTGGAAAGACAATGTGAATATTTGGATGT CGAAAAAGAAGGAGCTAAATTTCGGTTTGGTACTGTTCATATCGAGTCCT ATATCACATCACCAAATATCAGGGAAATTCAAATGGGAGCCATATTTGAT gttttacaaaagaaaactaAGGACATAGAGCTTGCCTTTTTGGTTGGTGA TTTCAATTTCCATGAAACAGACGAAGAAAATAAGTTTATAGAGAGTAGTC AATTTAAGGATACATGGCGGGTTGTCCATGAAGATCTAGATGGTTTCACC AAAGATTCTGATCATAATGTTATGAACCAAATGTTCCATGGGAAGCCTAT tacacagaaaaagaaaaggattGATCGAATTTTGTATATGGAGGACACCA ATGATGTGAATCATTGGAAGGCAACTCAATGCCAAGTTATTGGGGATGAG ATATTTGATGAGATCGTCATGCACGATCAAACCAAAGTTTCCATGTTTCC TTCTGACCATTATGGTTTACTTGCtaagtttgaaaaaaacttaAGTTAGG TGTAAATTTTTTCCCTAAAAgaactgttttgttttgattgataagGCATT TCCTTTGCTGATATTTCTACCATAAATcggattaatttttttgaataatt ttgtgTAGATGATCAAAAATCAGTTGAAAATGGACCTGTAGCAAATATCA AAATGTACGGTATATTTTACGTGGATTTAGTTTCGTAAGTCACAGTAATC TTTAAACGATTTCGttagatttatttttttccaaaaaaggataGTTGTAA AAATGTGGAATTAAATCTTGCAAAATTAATCGTTCATAGTACTTAAATTG TACGAAATTATTTGCGAAATCTTGGGACAGTAGAACAATTTGGGAGTGTT ATATTGTTGTTATCctatttatatttttgtatgatatgtttttctcaaaa aatttctatattttgtataattttttgtaattcttatagatatattataa agattttttttaaatgtcgtAAAAAGAAGCACTAAGAATTGGATCCTGTA TATTTTTTCAAGAGGTCccttaatttgaaataaaacgaAAAACCACGTGT TACCACCCAGTAGAGCTGAGTTACTTGAATTTGAGTTACAGTTTTTTCAG ATCAACCATTGTTTTTCTTGTTCATTTTagattcaaaaaaacttttatca acaaaaagaaagaaaaacaaacaaacacatcAAAAAATGGTGTTAGGAAA TTGGACATTGACCGAAGCAGTTGACCAGACAGCTTtctttgaagaagaag aagaaaatcaatatgAATGCGAAGATGAAGAAACTAGAACACAATATCAA TTTCATTTTATGGATAACCACGATACCAAAAGGTATGGACTTGTTGATAG GGTCGCTAAGCTTTATATTTCCCTAGAGACTGTTTCTTGCTTCCTGGACA ATAAATCTGTTTTGATAGGTGGGAAATTTGGTATTCTATATAAAGTGCAG TTAATCATTATGCCAAAAAGCTGCAAAAGGTTAAGACTTTTCGGTAGAAC TAGACCCTAAGATATTGCGGGTATTGGTGTGTTTGTTCGGGGGAGGCTTT GATTAATCACCTgatatagaaaaaataattacaagagaaaatattatata aacaAATTTACAGAGCAAACAGGCTCTGGCGCAATGAATTGTGGGTAATT ACAGACTGAATGTGCTCTAGTAACTACTTAGCGCTTGTCCAATGAAAAAT CGTCAATAAGATTTGGACCCATTGGAAGACGTTGTTAGTCCCACCCCGAA TGGATCATTTATAGCGCTACGAGAGAGCCCAAGAGATTTTTATATCCTAT GTTCTTATTAActgtttaaaaaacaaaaaatatttcttcaatCTCTATTT CAGTTTTGAAGCTGACGAGCTCATTATTTGCATTGGCAGCGGAAACGCTT TCATTGAAACTTACACAAACATGGGTGACAGTCAACACATAGCCTCATAT CTCCAATCTAAAAGCGACTCTGATTCATCTCATAATAAGAGCAGTAAAAA GAACTCTTGTCATGTTTATAAAAGCCTAAAGACATTGATATGCAGCCTGA AGTATCACATTGAACCGAAAGACCTTCACAATTGGACATCAACGGTAATT GTTATAATACTGATTTGTTTTAGGTATTATTGCTTTGTTTTCATTTGACC CAGGGgtcttatattttatttaggCCCGGCGAACGGTGAATTTCACCGGT CTAAAAATTCGGTTTGCAGCCTCAAGTACATATTCATGTTAATCAGggct tgctaagaattcgccgGTCTAAAATCTACAATTCGCCGAATTCGTTAGcc tatcaaaaagcaaagtcaAACCCCATGTCTGACCTCTGTCGAACCTTTTA GTTTTGCCCTGTGGAAGTCAGTGTGAAATTAGACTAATGTNTAGTTTTGT CCTGTGGAAGTCTGTCTGACATTAGACTCAACTAACCTAATATTTGTTCT TTCTGGTAGTTACTGCAAAATATAAATGTCAACAATATCAAAGTACTTTG TCAATCACCCAAGTATTTACTGCGGAATCAAAGAGAGTCTGACCATGGCG ATGTAAATGATGTTGACGTACTGAGGTGTTTGTCGTGTCATGCTGAAAGA ATGGAAAGTCCCTCGAAAGTGAAAGTTctggaaaatcaaaatattattaa aGATTTGCCAGCAGCAGgtcagttttttgttttcattttgagcaaatttc aaatttcaactctctctaattcgaatttctatTATTCAATTCTTTCTGTA AtccgaactaaaatattggtcccctcagctggagATTGGTtcaaattact ctctgtaaatcgaatctttctcttattcaaaaagaatcttttgtcccttg aagatcgaattaaagagagtcaactgtatgttTTAATCATTGCAACACCG TATATCCTTTTCCCTCAAACACTGCAAGCAGGAAGCTAAAAGAAATCTCA AGTTCAAACTTCTTATTATActtcctattcatgatatgcaccattgcaat gtcttctgacattacatcatggacccaatagctgattggttgtaagtgac gtaaaatcagtcaatacgtcatNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCggccgccgtaccag attttcacaaaaatacccgaagtttttctcttcgtcggtaaaattgctat aaaatcgcttaaatttcctcattcgccgtaccagatataaaaagcttccg tcgtgcctgctGATTCGTTGAAATTGACGTAATGACTTATTTTaagtcac ttacaaccaatcagctgttgggtcggtgatgtaatgtcagaagactaTCA TGAATATActgctttattttcttttttttatagtgTTCAACTACTGTTCA GCGTACGAGAAATCGTGCACCCTTTACATAGCATACACTGAATCGCACTT CGTTGACGTCTTCACGTTGAAATGTTTTGAACCTCTTCTTAAGGAAGTTA CTTTATCAAATCAAGTAAGTAGATCAAAGGgattgtttaaatttttcttt ttggaaaattggcTTGTTTCCTTATTCTTTCTTGAagttatctttttttt ctcgccttaaagtcaaaattcagatTTGAGCATGTCAACTTAGACCATAT GTCAATGTAAGGAAGCTctttgccaaaaaaaattttaaaccatcTGACTA TCAGTTAAAAACACGGTAAGGTTTTTAGCGGAAGAAAAAACTCCGTTaag attttttcattgaaaaataaaaagtggGTTGGCCATGGTCTAGTATGGGA AATTTTGAATGCTCACGGCCTTTTTTACTTAGCTTACCAGATCGAGCTTG CCCGGCTTACCTTCTTACCTTTGACCAACCTTTTTACACcttgaaaacat tattttcttctAGCCCGAGgccatctgaaaaaaaatttccataactgTTT CATGTTTCTCTTTTCTAGGTTTCGGATAGTGTTTTGGCTACAAGGctgaa aaattttgaaggttATGGTGTCTCTAAtaatgtttatatttgatatGATT TGTAAATAAGTGAAATAGAACTGTAAATTTCATCTGTCTTTAGATAGTGT CCATACTGTTTAATACCTGACTTTTACCGTTTCGTACCCTGTTGTTTCGA GTGTATGACAATATAAATCTCTTatgaattcctcgagggaattctattg

Coding sequence (CDS) from alignment at sc0000010:695349..702997+

>TCONS_00001370 ID=TCONS_00001370|Name=TCONS_00001370|organism=Clytia hemisphaerica|type=CDS|length=1986bp|location=Sequence derived from alignment at sc0000010:695349..702997+ (Clytia hemisphaerica)
atgtcaaataaCACTTTAATTTGTAGATCAGCAAAATGtaaaactctaaa
aatattaaacataTCTAAAACGatgtcaaaaacaatttttattggTGTTG
CTGCTGTAGTAATTgctggcattttttatttttacaacaCTTATGATCTT
GGTGTTAACTCTTTTAGCAGTGAAAAAGATAAACCTGTAGCCACTTTGAA
AAGCGTGCAATATTCAATGATGGGTAACAAATCTACAACAGCTTGTAAAG
ATTTTTCTGTCTTAACATGGAATGTATGGTTTGGTACTGGCCAGAAATGG
GATGCACCGGCAAAAAGATGGGTAGAGCTGTTGCATATTGTGGTTGGCAA
AAAGCCAGATGTTATTGGATTTCAGGAATGCACTGCTGACTTCTTGAAAA
TTGTACAAGGACACACagaattttcaaatctttatgTTGCACTCAATGAC
AAACCTGCTCATTCAAGATACTTTGTAATGATTTATAAAAGGAAAGAATT
GAAGACTTTGAAGAAAGATACAATTACTTTCAAAACACAACATGATAGAA
GATGTGAATATTTGGATGTCGAAAAAGAAGGAGCTAAATTTCGCTTTGGT
ACTGTTCATATCGAGTCCTATGTCACATCACCAAATATCAGGGAAATTCA
AATGGGAGCCATATTTGATGTTTTACAAGacaaaaaagctaagaacaaaG
AGCTTGCTTTTTTGGTTGGTGATTTCAATTTCCATGAAACAGACAAAGAA
AATAAGTTTATAGAGACCAGTCAATTTAAGGATACATGGCGGGTTGTCCA
TAAGGAGGCACCTGGATATTCTTTTGAGTCCAAACATAATTTGATGAATC
AACATGCAATGCTTGTTGGAGAAGGCATCTCCACTCCAACTTTCTTAAGa
ttcaaaaaaacttttatcaacaaaaagaaagaaaaacaaacaaacacatc
AAAAAATGGTGTTAGGAAATTGGACATTGACCGAAGCAGTTGAatgtcaa
ataaCACTTTAATTTGTAGATCAGCAAAATGtaaaactctaaaaatatta
aacataTCTAAAACGatgtcaaaaacaatttttattggTGTTGCTGCTGT
AGTAATTgctggcattttttatttttacaacaCTTATGATCTTGGTGTTA
ACTCTTTTAGCAGTGAAAAAGATAAACCTGTAGCCACTTTGAAAAGCGTG
CAATATTCAATGATGGGTAACAAATCTACAACAGCTTGTAAAGATTTTTC
TGTCTTAACATGGAATGTATGGTTTGGTACTGGCCAGAAATGGGATGCAC
CGGCAAAAAGATGGGTAGAGCTGTTGCATATTGTGGTTGGCAAAAAGCCA
GATGTTATTGGATTTCAGGAATGCACTGCTGACTTCTTGAAAATTGTACA
AGGACACACagaattttcaaatctttatgTTGCACTCAATGACAAACCTG
CTCATTCAAGATACTTTGTAATGATTTATAAAAGGAAAGAATTGAAGACT
TTGAAGAAAGATACAATTACTTTCAAAACACAACATGATAGAAGATGTGA
ATATTTGGATGTCGAAAAAGAAGGAGCTAAATTTCGCTTTGGTACTGTTC
ATATCGAGTCCTATGTCACATCACCAAATATCAGGGAAATTCAAATGGGA
GCCATATTTGATGTTTTACAAGacaaaaaagctaagaacaaaGAGCTTGC
TTTTTTGGTTGGTGATTTCAATTTCCATGAAACAGACAAAGAAAATAAGT
TTATAGAGACCAGTCAATTTAAGGATACATGGCGGGTTGTCCATAAGGAG
GCACCTGGATATTCTTTTGAGTCCAAACATAATTTGATGAATCAACATGC
AATGCTTGTTGGAGAAGGCATCTCCACTCCAACTTTCTTAAGattcaaaa
aaacttttatcaacaaaaagaaagaaaaacaaacaaacacatcAAAAAAT
GGTGTTAGGAAATTGGACATTGACCGAAGCAGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000731XLOC_000731Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001370-proteinTCONS_00001370-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001370-exon-sc0000010-1491911889:695349..696292TCONS_00001370-exon-sc0000010-1491911889:695349..696292Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1510915933:695349..696292TCONS_00001370-exon-sc0000010-1510915933:695349..696292Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1575043694:695349..696292TCONS_00001370-exon-sc0000010-1575043694:695349..696292Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1491911889:699779..699980TCONS_00001370-exon-sc0000010-1491911889:699779..699980Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1510915933:699779..699980TCONS_00001370-exon-sc0000010-1510915933:699779..699980Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1575043694:699779..699980TCONS_00001370-exon-sc0000010-1575043694:699779..699980Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1491911889:700502..700742TCONS_00001370-exon-sc0000010-1491911889:700502..700742Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1510915933:700502..700742TCONS_00001370-exon-sc0000010-1510915933:700502..700742Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1575043694:700502..700742TCONS_00001370-exon-sc0000010-1575043694:700502..700742Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1491911889:701108..701315TCONS_00001370-exon-sc0000010-1491911889:701108..701315Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1510915933:701108..701315TCONS_00001370-exon-sc0000010-1510915933:701108..701315Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1575043694:701108..701315TCONS_00001370-exon-sc0000010-1575043694:701108..701315Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1491911889:702182..702312TCONS_00001370-exon-sc0000010-1491911889:702182..702312Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1510915933:702182..702312TCONS_00001370-exon-sc0000010-1510915933:702182..702312Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1575043694:702182..702312TCONS_00001370-exon-sc0000010-1575043694:702182..702312Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1491911889:702767..702997TCONS_00001370-exon-sc0000010-1491911889:702767..702997Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1510915933:702767..702997TCONS_00001370-exon-sc0000010-1510915933:702767..702997Clytia hemisphaericaexon
TCONS_00001370-exon-sc0000010-1575043694:702767..702997TCONS_00001370-exon-sc0000010-1575043694:702767..702997Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:695349..702997 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.911 16.1715 8.70851 6.13193 8.44987 5.95549 10.3172 10.4575 10.6681 9.47937 8.79399 7.13945 7.08774 8.23839 8.22804 8.16754 9.09922 8.79947 7.01762 7.63369 10.9722 10.4028 15.4563 14.9456 7.15234 7.68961 6.42453 4.65737 9.74334 10.1636
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001370 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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