TCONS_00001256 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001256
Unique NameTCONS_00001256
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1988

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001256 ID=TCONS_00001256|Name=TCONS_00001256|organism=Clytia hemisphaerica|type=transcript|length=1988bp
AAACTGTACAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGG
ATCCTTGTACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTA
CATACCTCTCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGA
CTTGGTAACTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTG
ATACGCTTACAGGGTACCTACTAAACAATCTTAACTGGTGCGGTGGAACG
GACGCAGATGGACTAAATTCAACATCTTGTCCGAAAACGTGTAATGTGAT
GACACCTGCTTGGACATTGGCATCTTCAGAGTTCGCTAAACGATCAACTG
AAACAGCCAAAGTTCTCTTGAACGCGACACGTGCTAACAACAAAGACGCA
TATGCTGATGGCAGTTTCTTCCGAACTGTTGAAATGCCCGAACTGCAAGT
GGATAAACTTGTCGTATATTTAGCTTCCAGTATTGGTAAAGAGGTCAGGG
AAAGATGTGCGGATTCGATTTCGATGGAAAATATACGGGCTGATGCGGAA
GCTAAGAATATCCAAGTGGAATGTATTGATCAACCAAGCCTGGTACTCAA
TGTTTATTGTTTGAAGTACCCAAAAGCCAAAGAATGTGTCAACAAGGATA
ACTTTCGAAGCGATTCAAACGCCGATAAAGAAGAAGCTAGGAAGTGGATG
ATAGTTGGTATTGTGTTTTGCACACTGTTTGTTGTCTTCTCTCTCACTGC
ACTCATTGCATGGATCCTCAAACATAAACAATCCAAACATCGAACTGCTG
TCCAAATGACCAAAAGTGGTGAAGTCATCGCTAACCCTCAAACCATTAAC
AACAATGTCTAATTCCCTACCCCTAACTACTTACTCACACTCATAATATT
CATTTTGGTGTAATTTTTATAATGATTTTGTATGGGAgggtttgattttt
tacaaggtttttttatattttgataataaaatgGTGTTTGGTGTAAGTCT
ATCAAATTATATTTTCATCCTTTCGAATTTCGAGTCGTTAGCTAATATCT
TCCATTCGTTCACTCAATATCGTGAACATCAGAAATTAGacaaatttttg
ctttaaaacatCGAGTTTAATGAAGCCAAAAAGTTGACTCCTGCActttt
attgttgttcaaaAAATGATGTCATTGTTGAGCTTATCAACAATCATCAA
GCCTGATAGCTTTCAAAAAGAGTCTTTTCCAAATATTGGTAAGGGAGGGA
GAGAAAAAACAATCGGGGCTTGGTCAAGGAAGGCATATTGAATTAATTCC
TAATCATTAAACCCTGTGTGCATATTCAAAGTTAATTGAGTACTTATGAT
CGACTAACATAAACTTTTTGGGACTAATTTCTCACACAGGTTGTGGAAAA
CCGTTTGTTTGATTTTGGTAGCCGTGGTGGCTGTTCTAATCGTTTACATC
ACGATCAGTCTCGTGCACCGTGCAGTGTGTTACAAACCGGGTGATTACAA
ATATTCACATAGCTGGTCTTTCTCAAAGAAACCCATGCTGCAGGACGATG
AGGTAGAAAATAATAACGATATTGAACGTGTGGTGTGAGACCTGCTTTGT
CATAAAAAGGAAAACTGCAACAGTATATTAACCTGAAGTTATGGTTAGTT
TTTGGCAGGAGATGACAGGTGGAGGATGGAGGGTTCTACTTCGCGTCACT
AAGCCCACCGCTGTATTCACCAGCCGTCAAAAGATATCTAAGAGAACAAG
TGCTCTGTATTATATGACGGAACGAACACTTTTACCAAGAGACATTCAAG
TTATGCAATGTTAATTATAATTTGATTCACAATTTTTCTGACAAAAGAAG
AAACTGTGtataaagatattttaaatatcCGGGATTTCAGTTTATTCAAG
CTTCTTTAAAGTATTGTAAAATTAGATGTACGATTTATTAAGGTAGAAAT
ATTAATGAAGATTTATGCTTGAAATATGTTTATTGATA
Run BLAST on NCBI

transcript from alignment at sc0000007:1297246..1308986-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001256 ID=TCONS_00001256|Name=TCONS_00001256|organism=Clytia hemisphaerica|type=transcript|length=11741bp|location=Sequence derived from alignment at sc0000007:1297246..1308986- (Clytia hemisphaerica)
AAACTGTACAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGG ATCCTTGTACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTA CATACCTCTCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGA CTTGGTAACTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTG ATACGCTTACAGGGTAAGATCTTTGTTGAACCTGATCGAGAATTTCTAAT ATACCTTAGTCCAAAATAACCCAATTGTGCTTTTTTCTCGAGTTCGATTT TAATTTTTCATATAAGAAATTTTTTTTGTGATTGATCTCCAGGTACCTAC TAAACAATCTTAACTGGTGCGGTGGAACGGACGCAGATGGACTAAATTCA ACATCTTGTCCGAAAACGTGTAATGTGATGACACCTGCTTGGACATTGGC ATCTTCAGAGGTACGAGGTATGTTTTTACCATCGTAAACCTTTTCAAAAG TTCCTGATATTATACTATATATTTTTATTTTTTATTAAAAATCTTACAAA CTGATCTCGTGTGAACTTTTTCTTCGTTTCATAGTTTGCTAAACAAGCAA CTGGCGTATCGAAAGTTCTCTTAAATGCGACACGTGCTAACAATAAGGAC GCGTATGCTGATGGCAGGTTTGTTACACATTTCTGTCAGTTGTGGTTCTC TGTTTTCCAATATTCGTGATTGTCGTAGCATTAGAAAGTCGCTAAGAAAA CCTCTTTATCATAGTGAAAAGATGAAGTACCTACCAAGCAATATCCGCTT TTTTGAATTAAGCAGTGCTCTCAAGAGCAGATTTTTCTAAATTTATAATT TCAATGTTGTGTAGTTTCTGCATAAGAAAAGTGAACGCTACAAATTGTTG TTGATTTTATTCGATTAGGGCTCAAAAGTTACGCCCAGTAAGCCCGCTAC GCCCACGTGAAGCACGTAGTCGAAACGTGATCGTATTCGTTAATTTTATT ACAATATACAAATTAGTCCTGATTTATTTCATGCTAAAGGATAAATATTT AGTATCTTTCAAAAATAATAATTTGATTAGTTGCTTTCACTTTTGATTCT TGTTTCAGTTTCTTCCGAACTGTTGAAATGCCCGAACTGCAAGTGGATAA ACTTGTCGTGNTGTTTCAGTTTCTTCCGAACCGTTGAAATGCCAGAACTG CAAGTGGATAAACTTGTTGTATATTTAGCTTCCAGTATTGGTAAAGAGGT CAGGTACGTAAATTACCATGCTACAATATGAAAATATATAGCGATTAGAA TTATGTTTATAATGTTGATGTCCCTTCATCCTTTATTCTTTGCATTCTCT TGCCTGCTATTGCATTTTACTNTTGATGTCCCTTCATCCTTTATTCTTTG CATTCTTCTGCCTGCTATTGCATTTTACTCTCAGGTATCTGATAAATTTG AGTTTGAAAGGATTGGCGAGTTGTATAAAATATAATAATTGACAGAATTG ACAAGCGAGGGTAGGGTCGTATCAAGGCACCTTAGATCTCGGAATTTGAT AAGGAAATTGTAATTTTCCAATTCTCTCTAACTACAGGGAAACGTGCAAT GACTCAATATCAATGGAAAATATACGGAAAGACGCAGAATCACGAAATAT TGCTATTGAATGTTTTGACCAACCAAGGTGACCAATAATAAGAAATCCTT TTGTTTATGTTTTATCTTTAAAGCTTCAATGATCTAACTGACTGGAGCCT ATAATTTATTTTAAATTTAATGAGTTTTTATCTTGTCGAGCATAGATATC GATTGCTCTCGACAAAAACAAAGAGCTATCTTCGATATTTCAATCGATAT TACTTTTACCATTTTCCAATTTTCCTTAATTGCAAGCTTGGTATTGAACG TATATTGTTTGAAGTACNATTTTCAATCTATATTTTCCACTTTTTCTTAT TTCGCAAGCTTGGTATTGAACGTATTTTGTTTGAAGTATCCAGCGGCAAA GGAGTGTGTGAGAAGAAATACGCTGTTGAGCAAGGATATTCATCACGCCA AACAAATATCAACTCCTGAAGATGAAGTCAAGTAAGTTGTGTGAATTCAA AACGATCTTAAGAATTTCTTTATATTATTTACGCGCATTACACTGTCCGG CATTGAGACTTGCAGATGGTGNGCTTTTTATTTAACTATAGTTCGTATGC TTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTAT GCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGT ATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTC GTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGT TCGTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATA GTTCGTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTA TAGTTCGTATGCTTTTGCAGGCTTTGGAAGACTGTTTGCATCGTTTTGAT CGGAGTATGTGGGATACTTTTGATGTATATTGTGATGACCCTTGTTCATC GATCCGTGTGTGTTGGTAAAACTTCGAACTTCAAGTATCCTCATACTTGG TCCATGTCCAAGAAACCGATGCTCTCCAATGATGAGATTGACAACAATAA TGACTTGGAACGCGTAGTGTGAAATTTGTTCGCAATCAAAAGGAAGTATT ATAAGATGGCGCTGAAATGATTACGCACGCCATTGAAACAGGGTTGTTGC GAGTTCGAAAGGTCAAAGAAATCGGCTTCAAAGTTAGCAATTGAAGAATG AGATTCACCAAGCCATGGTATCGAATCGATTCTCAAAATCAACTCAAAAG TGGTTTCGCTAATATGCATTAGGCTTCTGCCGGACAGGGCTATGATTAAT TGAAAAACATACGAAATAAATAATAAGGATGATAAAAAAGACAATTTGTA GATAGCGATTTCGAAGTTTGTATGTAAGTTCGCAAGAATGTTGTTATTTG ATGATTTTACTTTTCTTTCTGTAAATAATTTAAAGAATTGTATGTAAGAG ATATATGTATTTCGGAAGTAGTTTCTAACTGTATTGCTTCATATCATTTG GATTTAATACTTCCTGGTTTGTATGATGATTTTGCTACGTAGCAAGGTCA AACGGTTAAGTGGGATTTATTCAATATAATGTTTTCCATATAAAAAGCCT TTGAATCACCCTGTTCGATGACATTGAATTGGAACAAGATTGCCGTCAAC CTGTTACTAGTGACTGGGAAAAGTGAAACTGCAACATCGAAATTCAAAGG TGAGTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTGGCAGC AATATACACCATTGATGGTATTTGTTTTTCATTTTAGATATCCGTTATCA AATTTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATATCAGGT GAGTTTAGATAAACACTTAACAAAGGAAATTGGCATTTCTTTAATGTAGC GCGAAATTGTTATTGTTTTTGTTGAATTTTAAAAGTTTTGCGGTTTATCA CTTTCGCAATTTCATGCTATTATTTAAGTACAGAAAGNGTTGAATTTTAA AAGTTTTTGCGGTTTATCACTTTCGCAATTTCATGCTATCATTTAAGTAC GGAAAACTTTTGCATTGTTCATTTACTATGTAGTTGATATGGGATAAGCT CTTCAAAAAAACTCCAATTCTTATCTTGTTCTAATCAAGGGGAAGATCTG AGGGTGCTTACCCTAACTCTCTCATGGTGAGATCAAAAGGGGAAAAAAGA AGAATTTTTTAACAGTTAAAGCCATCATAAAAAGGCGTCCTTTTTGTTTT CATTTTCTCACTGCGTGATCTCGCACATTGATGGTCGAATATAATCAATA AGAAAAATCCACAAGAGAGCTCCCTATTCGTTGCACCTGCTATGTATATT ATGAACCAATTTCTTTAATCATCAATTTTGTATGAGAACCAGTCAGAGAA GACTCTTCCTTCCTTANGTTCGATGACATTGAATTGGAACAAGATTGCTG TCAACCTGTTACTAGTGACTGGGAAAAGTGAAACTGGAACATCGAAATTC AAAGGTGAGTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTG GCAGCAATATACACCATTGATGGTATTTGTTTTTCATTTCAGATATCCGT TATCAAATTTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATAT TAGGTGAGTTTAGATAAACACTTAACAAAGGAAATTGGCATTTCTTTAAT GTAGCGCGAAATTGTTATTGTTTTTGTTGAATTTTAAAAGTTTTTGCGGT TTATCACTTTCGCAATTTCATGCTATCATTTAAGTACGGAAAACTTTTGC ATTGTTCATTTACTATGTAGTTGATATGGGATAAGCTCTTCAAAAAAACT CCAATTCTTATCTTGTTCTAATCAAGGGGAAGATCTGAGGGTGCTTACCC TAACTCTCTCATGGTGAGATCAAAAGGGGAAAAAAGAAGAATTTTTTAAC AGTTAAAGCCATCATAAAAAGGCGTCCTTTTTGTTTTCATTTTCTCACTG CGTGATCTCGCACATTGATGGTCGAATATAATCAATAAGAAAAATCCACA AGAGAGCTCCCTATTCGTTGCACCTGCTATGTATATTATGAACCAATTTC TTTAATCATCAATTTTGTATGAGAACCAGTCAGAGAAGACTTTTCCTTCC TTGAAAATCTTGTTTTCATCGACACCACCTTATGATCTACCATTCTAATT TTTGTTCAATTTCTTCTTCATTTTTCTCTCTCATGTCAATATTTTTATTT TATTGTCTTGTTCATTTGATTGTCGAATGTTTTATTATTTTGTTCATCAC CTTAACTAAAGAGGATTGCTGCTCATAATTCCTGACAGTAAAGTCGCTCC TTTGTTTTGCCGGGGATGAAAACTACTTTAACTGCTTCTGGTCACCCTCT TTTCTCAGGAGAAGAGAAAACCTCAACGAATTACTTTTTCCATCCATTGT TTCTTCATTTTTTAATAATCGTATATCCCTCAGAACATAATAAAGCAGCT GGTCAAACCCAGAGACATCTTACAAATTTCAAAACAATGTAGCGTTGTTA CAAATGGAGAAAGATTATTCCGTGATATACTATCAAGTCGTTTCATGTAC ATCTCATTAAAGAACAGTGTAGTATTTTCTTCTGATTAATACCTTGTCAT GTTTCACCGTATGTTATTAATGAGCTCTTCAAATACATAGTTAATTGACA GATAATTAAGTTGGTTAATTGATACCCATTGCTTTTGAATGAAGATCCCT TGTTGTGATATTATGGGAACAAAATACGGTCAGGTGCAGGAAGTAGATCT CATTTAGATCATATTCTCTCGCATGGTCGGCTGGATGCAGTGCTCTATCT TCGATTGTTGTACATACATAGTTTTCGTTCTGTTTGCATGAAGGATTCTT GTGTTGTGATAACAGTCTTTCAATGATGGTGTGATTTGCATTTCATATTT ATTTGCGATGATAGCTTTCCCTTTGCCTATTTGAAATGTACTTTGTCAAC AATAAGACTCAGGGGAATCTTTTCATTTATTGATATTAAGATTTTGGTTG GGGTTCTCTTGCTGTTGTCTGTTTGACTGGTGTACATTATGTAATGACAC CCCGACGTGTGCTTAGTAAGAGGTACCTCACTGCGATTTTACTCTGTTAA TAAGATTGTTTGGTACTCTAACGACCTATGATCTCTTTGGAATTTGCACT CTCAAACTGTGCTTTACAATGGAAGGATACTGTGAAATTTAAATTGATGA CATTGAATTATTTTCTTCTGGTTCCTGATGTTTTTGTTCATTTCGTCATT TTTCTCAGATCTGTTTTTATTGTCACTTCAAACAATTTTGTCTCTCTAAA CATCAGTTTTTAAAAACCTACTCGACACGGTTTTAAAAGCATACATCAGT CAGTTCACGAGAAAATCACAGAAGGTCAGTCCGGAAATTTTATGCTGAAT TATTATCATCTGACTTCCTTTTAATTTTTGTCTATTTCTCTTTAAAGCGA ATAGATTACAAGCAGAATCCATAGACAAGCTATTTTGGAAACAGGTATGT TGAGTTTTGTTCTTATAGATAGTACAACATGACATCCCGATATTTTGAAG TTGTCACGGATCACTTCTAATTATATAGGAAAGTTGGTTTCTTTGAAAAC TTTTGTCATCAGTCTTTTTCTTACAATCATTATCACTAAGACTTTGTGAA AAGTTAAAAAAATCTTTGGGTTAGTTTGTTGATGTATCAAAAGACAAGTG TAAAATGGATCAAGTTCCACAAGTGAAATAAGAGATCGATCATTTCTCTT TAAGTAAAGAAAGCTCCACTCATAATCTGTCATTATAATCAAGAATATAC TATTTTTTGCCGTCATCAAATAAGACTTATATCTCGATCAAAAGTATCAG TTTAAAAAGAACAGATGTCATTCCACACTTTGTTTCTCTAGGCTGATTAT CATAGTAGAAGTCATCATGTGCCGTCATTTGGTTGTCTACATTTTGCTCG TTCTGGCTTCTCTCTACCGAAGCACACACTCAGCTGGTACTACACCTGGT ATTAAAGAAGTCTTTGTTGGAAGATGTTGGCAATATCAAAGCATCTCTGA ACATAACAAACTACCTGAATTAAAAGTGAACATAAACTGTACAAAATTAT GGCTGGCTTTTTACGATTCGTTCGCTTTCAAAGATCCTTGTACTGTTGGG GTAGATGATTACAAGACGTTCTTTGATATGTTACATACCTCTCGAAAAAT CAAGAATGCTTTGTTTTGGTCTGGTTTGCATGACTTGGTAACTGACTTCA CCTTCATAAATGATGATTACATTGTACTGGAAGATACACTTACAGGGTAA GTTCTCCATGTGTACCATTTGAACATCACTTTCAAAGAAAGATTTATCCT GTTAAAACTGCCCATTCCCAATTAGCTCGTACAGCATCGCCCATTTTTCT GTTATTTTTTACGTGAAACTTTCAGGTACCTGCTAAACAATCTTAACTGG TGCGGTGGAACGGACGCAGATGGACTAAATTCAACATCTTGTTCGAAAAC GTGCAACGTGATGACACCTGCTTGGACATTGGCATCTTCAGAGGTACGAG GTATGTTTTTACCATCGTAAACCTTTTCTTTGTAGTCTAAATAGAATAGT GCTCAGTACGATTGGTACATGAAAAGGAAATTACGTCAAAAAGTTTTCAG CCAGTAAATTGTCTTCGGATTTTTTTAGACTCTGGATGTTCGCTTACATT GAAAACCGACATATTGTTAATTGGTTTTATTTTTATTAATCCTTTTTTCA GTTCGCTAAACGATCAACTGAAACAGCCAAAGTTCTCTTGAACGCGACAC GTGCTAACAACAAAGACGCATATGCTGATGGCAGGTTTGTCCGTTTTTCT TGTTCTTTATCCGCAGAAATATTTGCTTTTGCTTACTACCATCGCAACAG ACAGTCTCTGACCTCCTCAATCCTATTAACCCTGATTATCGGTTTCTACG TAGACAGCTCTATATGACGAGGCTTTTTGCCAAAGAGATTAAACTTTCAT TATTTTTCACTTTCGATTCTTGTTTCAGTTTCTTCCGAACTGTTGAAATG CCCGAACTGCAAGTGGATAAACTTGTCGTATATTTAGCTTCCAGTATTGG TAAAGAGGTCAGGTACGTATTCTTAATTTATTGAATTTTGACTTTCTTGG AATATATCCAGGAGTTGGTTGTAAAGGGAAGGGAAGGATTTTTAGAATTC TTTGTTTTGTCTCCATAGCATAGATCTCATTACACTTTAATTATTGGAAA ATTAGTTTTTGCTACCCACAAAAGGAAATTGACCTCTCATTAAAACCCTT CATGAACATTCAAAAAACAAATTATGAAAAGCCTTTATTTCTAAATTTTG CCATCTGTTGTAAGGTTATATAATGATCAGGCTTAATCAAATGACCAATC GACGTCAATTTCTGAATGAATTTTCGCGATGCTAAACTGCTTCCTGTTTT GTATATAATGTTAATTCAATTATTGAAAAAAATGAAAAAATCGATTTTAT TAAGATTAAGCCTCTTTTGGCTTACGTTGTAAGGGGGAGGGCTTTGTGTT ATTGCGAAATCCTTAATCCCATGTTCGTTTGAGATTCTGTCGCTGAATCC TACAACTTCCTGTCTTCCAGAATAAAAAACAATACAACTTTTGAGGGTAG AACCGTTCATTTTCTCTTCAATACTTGAAGTCACATCTTGCAGTATATGA TGTAATAAAAGTTTGAATTCTTTCTCTCCAGGGAAAGATGTGCGGATTCG ATTTCGATGGAAAATATACGGGCTGATGCGGAAGCTAAGAATATCCAAGT GGAATGTATTGATCAACCAAGGTAAATGTCTGACGAACCTCTTTCTTGAG TGTTGAAAGCAAATACCTTTCCTCAATTTAACACCCTCTCTAACCTTAAG TACTTTGAAAGGTGTTCCTTGGTAATTTCATTCCATTACAAATATCATCT CTTGCTTTCTTAAAAAACTTTCATTCGAAAAGACTTCTATCTTTATTCTT TGGCCAGGAAATGTTTAGTAATTAATAAAGAACATTTTCGACATTTTTTC ACTTCTTTCCTTCTTCTGACTGCCCATACATCATGTCTTTAATCGCAGAT TTCCTTGCCAAGATTTGCAACTTCTCAATCGAAATCTTTAATGTATTTAT AGTTTTCAAAGCGACAAAAGAATTTCTATAGCACATAATAACACCGACTT TATTGATACTGAACTTTGGGAAGTCGGTTTTAACTATCACATTCACTTTC GATGGTTGTCTTACAAGCTTGTGAAAATCCTACTAAGTTTTTGAATATCT GTTAAGATCGCTTCCCACTCTGCTTAAAGCTTTCTTCTACTAAATAATTA AGCATCGCACGTTGTTCAACTACTAAAAAAGCTGATTGGAAAGCAAACTT TAGTAGTAATTCTCCTAACGCCTAAAATTGAAAGGGACATTAACGTTTAA GTCTACCTGGAAATGCTATGAAATGATTTCATGAGAAAATCACTGAGGGC CACATTTAATCGGATTTGCATATCCAAAAATACCCATGCCACTCTCGCAT ACCTCTCAGATCAACATTTTAAAGCTAACTGCACTCAAATGCCCTTATCC TATCCACTTTCAGCCTGGTACTCAATGTTTATTGTTTGAAGTACCCAAAA GCCAAAGAATGTGTCAACAAGGATAACTTTCGAAGCGATTCAAACGCCGA TAAAGAAGAAGCTAGGTAAGCAGTAAACCTTTTACGGGATTGACTTCTAA GGGCCCTTGCATACATCATCAATTTAGTAATTGAAACCGCTCTCACTCCC AACTTGGACTACCTGCACATATTTGAAGTGTTTTTAAAGTGCCTGACTTG GACTGTTATTCATATTACAACAATTAAAAGAGGAATTTCAAGAGTACTGT TAAACAAGTTTTGTCCTTGTTTAAACGTGTACCTCTTGACAATTCACGGA ATTTAAAAGCAATCATTGATGATATGAAAGAATATATACCTTATTATGGT CCATTACATGAATCTATCCCATTTTTGATCTCGCTTATCTATATGTCATG CAATTTCATCATCTTATAAACGATTCAACTCAGGACATTGAAATTGGTGA CCATCATTTTATCAATCACTCTCTTCGTTACCTTCCTGGGCTGTGTACTG TTGTTAGCCTTCCATCATCGTAAAACTATTCGCAAAAGAGCATTAAATCA GAAACATAATAATAAGACCACAGACAATAACAATTCAAATGAACTTTTAT CAAATGAACCAAATGGAAAAACAATGTGGTTATAGTTTCATGTGGTGTTC ATGACGCTGAGGTTATGCATGTCCTCCTCACAACCTGTGTCTTAACCTTC CCTAACCTCCATGCACCTTGTAGTTTACACTCGATTGTTCGAACCTACCC TGCCTGCCCTTTTTAGCATGTTCTGTTTGAAAATGATGTGAGATAGCGTT TCAAAGTCCCGTGCTAACTGGGAGAGGAAGAATCCCCTTCGCTATTTCTT TAATTTCAATTTTTGAATCAACTCGCACTGGATTTTTTGAAGTTGAAAGA TATTGATTTCGAAATCTGAAGCTAATGAAAGACTTTCCTTCCGTTTAATC ATGCCCTTTATTTCTCAACCCTTTCTGGGTAAAAACATGGTCTATGGGGC ATGGGTGTCAACGTAATGACGAGTGCATGAATCGGGCTGTGAAGCCCTCA GTTAATTGTTAATGCATTCATTTTCATTCATTGTTATGTATAGGAAGTGG ATGATAGTTGGTATTGTGTTTTGCACACTGTTTGTTGTCTTCTCTCTCAC TGCACTCATTGCATGGATCCTCAAACATAAACAATCCAAACATCGAACTG CTGTCCAAATGACCAAAAGTGGTGAAGTCATCGCTAACCCTCAAACCATT AACAACAATGTCTAATTCCCTACCCCTAACTACTTACTCACACTCATAAT ATTCATTTTGGTGTAATTTTTATAATGATTTTGTATGGGAGGGTTTGATT TTTTACAAGGTTTTTTTATATTTTGATAATAAAATGGTGTTTGGTGTAAG TCTATCAAATTATATTTTCATCCTTTCGAATTTCGAGTCGTTAGCTAATA TCTTCCATTCGTTCACTCAATATCGTGAACATCAGAAATTAGACAAATTT TTGCTTTAAAACATCGAGTTTAATGAAGCCAAAAAGTTGACTCCTGCACT TTTATTGTTGTTCAAAAAATGATGTCATTGTTGAGCTTATCAACAATCAT CAAGCCTGATAGCTTTCAAAAAGAGTCTTTTCCAAATATTGGTAAGGGAG GGAGAGAAAAAACAATCGGGGCTTGGTCAAGGAAGGCATATTGAATTAAT TCCTAATCATTAAACCCTGTGTGCATATTCAAAGTTAATTGAGTACTTAT GATCGACTAACATAAACTTTTTGGGACTAATTTCTCACACAGGTTGTGGA AAACCGTTTGTTTGATTTTGGTAGCCGTGGTGGCTGTTCTAATCGTTTAC ATCACGATCAGTCTCGTGCACCGTGCAGTGTGTTACAAACCGGGTGATTA CAAATATTCACATAGCTGGTCTTTCTCAAAGAAACCCATGCTGCAGGACG ATGAGGTAGAAAATAATAACGATATTGAACGTGTGGTGTGAGACCTGCTT TGTCATAAAAAGGAAAACTGCAACAGTATATTAACCTGAAGTTATGGTTA GTTTTTGGCAGGAGATGACAGGTGGAGGATGGAGGGTTCTACTTCGCGTC ACTAAGCCCACCGCTGTATTCACCAGCCGTCAAAAGATATCTAAGAGAAC AAGTGCTCTGTATTATATGACGGAACGAACACTTTTACCAAGAGACATTC AAGTTATGCAATGTTAATTATAATTTGATTCACAATTTTTCTGACAAAAG AAGAAACTGTGTATAAAGATATTTTAAATATCCGGGATTTCAGTTTATTC AAGCTTCTTTAAAGTATTGTAAAATTAGATGTACGATTTATTAAGGTAGA AATATTAATGAAGATTTATGCTTGAAATATGTTTATTGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000669XLOC_000669Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001256-exon-sc0000007-1575043694:1308774..1308986TCONS_00001256-exon-sc0000007-1575043694:1308774..1308986Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1575043694:1308543..1308644TCONS_00001256-exon-sc0000007-1575043694:1308543..1308644Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1575043694:1301744..1301759TCONS_00001256-exon-sc0000007-1575043694:1301744..1301759Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1575043694:1301453..1301535TCONS_00001256-exon-sc0000007-1575043694:1301453..1301535Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1575043694:1301175..1301258TCONS_00001256-exon-sc0000007-1575043694:1301175..1301258Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1575043694:1300466..1300555TCONS_00001256-exon-sc0000007-1575043694:1300466..1300555Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1575043694:1299572..1299673TCONS_00001256-exon-sc0000007-1575043694:1299572..1299673Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1575043694:1297246..1298543TCONS_00001256-exon-sc0000007-1575043694:1297246..1298543Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1510915933:1308774..1308986TCONS_00001256-exon-sc0000007-1510915933:1308774..1308986Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1510915933:1308543..1308644TCONS_00001256-exon-sc0000007-1510915933:1308543..1308644Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1510915933:1301744..1301759TCONS_00001256-exon-sc0000007-1510915933:1301744..1301759Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1510915933:1301453..1301535TCONS_00001256-exon-sc0000007-1510915933:1301453..1301535Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1510915933:1301175..1301258TCONS_00001256-exon-sc0000007-1510915933:1301175..1301258Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1510915933:1300466..1300555TCONS_00001256-exon-sc0000007-1510915933:1300466..1300555Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1510915933:1299572..1299673TCONS_00001256-exon-sc0000007-1510915933:1299572..1299673Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1510915933:1297246..1298543TCONS_00001256-exon-sc0000007-1510915933:1297246..1298543Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1491911889:1308774..1308986TCONS_00001256-exon-sc0000007-1491911889:1308774..1308986Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1491911889:1308543..1308644TCONS_00001256-exon-sc0000007-1491911889:1308543..1308644Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1491911889:1301744..1301759TCONS_00001256-exon-sc0000007-1491911889:1301744..1301759Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1491911889:1301453..1301535TCONS_00001256-exon-sc0000007-1491911889:1301453..1301535Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1491911889:1301175..1301258TCONS_00001256-exon-sc0000007-1491911889:1301175..1301258Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1491911889:1300466..1300555TCONS_00001256-exon-sc0000007-1491911889:1300466..1300555Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1491911889:1299572..1299673TCONS_00001256-exon-sc0000007-1491911889:1299572..1299673Clytia hemisphaericaexon
TCONS_00001256-exon-sc0000007-1491911889:1297246..1298543TCONS_00001256-exon-sc0000007-1491911889:1297246..1298543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1297246..1308986 -
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00001256 vs. Swiss-Prot (Human)
Match: CD38 (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 OS=Homo sapiens GN=CD38 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 4.258e-23
Identity = 68/225 (30.22%), Postives = 109/225 (48.44%), Query Frame = 2
Query:    2 NCTKLWLAFYDSFAFKDPCTVGVDDYKTFFYMLHTSRKIKNALFWSGMHDLVTDFTFINDDYIVIGDTLTGYLLNNLNWCGGTDADGLNSTSCP---KTC--NVMTPAWTLASSEFAKRSTETAKVLLNATRANNKDAYADGSFFRTVEMPELQVDKLVVYLASSI--GKE-VRERCADSISMENIRADAEAKNIQVEC--IDQPSLVLNVYCLKYPKAKECVNK 646
            +C  +W AF  +F  K PC +  +DY+    +   +      L WS + DL   FT +  D   + DTL GYL ++L WCG  +   +N  SCP   K C  N ++  W   S  FA+ + +   V+LN +R+     +   S F +VE+  LQ +K+    A  I  G+E  R+ C D  +++ + +    +NIQ  C  I +P   L   C+K P+   C ++
Sbjct:   81 DCQSVWDAFKGAFISKHPCNITEEDYQPLMKLGTQTVPCNKILLWSRIKDLAHQFTQVQRDMFTLEDTLLGYLADDLTWCGEFNTSKINYQSCPDWRKDCSNNPVSVFWKTVSRRFAEAACDVVHVMLNGSRSK---IFDKNSTFGSVEVHNLQPEKVQTLEAWVIHGGREDSRDLCQDP-TIKELESIISKRNIQFSCKNIYRPDKFLQ--CVKNPEDSSCTSE 299          
The following BLAST results are available for this feature:
BLAST of TCONS_00001256 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD384.258e-2330.22ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 ... [more]
back to top