TCONS_00001255 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001255
Unique NameTCONS_00001255
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3923

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001255 ID=TCONS_00001255|Name=TCONS_00001255|organism=Clytia hemisphaerica|type=transcript|length=3923bp
AAACTGTACAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGG
ATCCTTGTACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTA
CATACCTCTCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGA
CTTGGTAACTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTG
ATACGCTTACAGGGTACCTACTAAACAATCTTAACTGGTGCGGTGGAACG
GACGCAGATGGACTAAATTCAACATCTTGTCCGAAAACGTGTAATGTGAT
GACACCTGCTTGGACATTGGCATCTTCAGAGGTACGAGTTTGCTAAACAA
GCAACTGGCGTATCGAAAGTTCTCTTAAATGCGACACGTGCTAACAATAA
GGACGCGTATGCTGATGGCAGTTTCTTCCGAACCGTTGAAATGCCAGAAC
TGCAAGTGGATAAACTTGTTGTATATTTAGCTTCCAGTATTGGTAAAGAG
GTCAGGGAAACGTGCAATGACTCAATATCAatggaaaatatacggaaaga
CGCAGAATCACGAAATATTGCTATTGAATGTTTTGACCAACCAAGCTTGG
TATTGAACGTATTTTGTTTGAAGTATCCAGCGGCAAAGGAGTGTGTGAGA
AGAAATACGCTGTTGAGCAAGGATATTCATCACGCCAAACAAATATCAAC
TCCTGAAGATGAAGTCAAGCTTTGGAAGACTGTTTGCATCGTTTTGATCG
GAGTATGTGGGATACTTTTGATGTATATTGTGATGACCCTTGTTCATCGA
TCCGTGTGTGTTGGTAAAACTTCGAACTTCAAGTATCCTCATACTTGGTC
CATGTCCAAGAAACCGATGCTCTCCAATGATGAGATTGACAACAATAATG
ACTTGGAACGCGTAGTGTGAAATTTGTTCGCAATCAAAAGGAAGTATTAT
AAGATGGCGCTGAAATGATTACGCACGCCATTGAAACAGGGTTGTTGCGA
GTTCGAAAGGTCAAAGAAATCGGCTTCAAAGTTAGCAATTGAAGAATGAG
ATTCACCAAGCCATGGTATCGAATCGATTctcaaaatcaactcaaaagtG
GTTTCGCTAATATGCATTAGGCTTCTGCCGGACAGGGCTATGATTAATTG
AAAAACATACGAAATAAATAATAAGGATGATAAAAAAGACAATTTGTAGA
TAGCGATTTCGAAGTTTGTATGTAAGTTCGCAAGAATGTTGTTATTTGAT
gattttacttttctttctgtaaataaTTTAAAGAATTGTATGTAAGAGAT
ATATGTATTTCGGAAGTAGTTTCTAACTGTATTGCTTCATATCATTTGGA
TTTAATACTTCCTGGTTTGTATGATGATTTTGCTACGTAGCAAGGTCAAA
CGGTTAAGTGGgatttattcaatataatgtTTTCCATATAAAAAGCCTTT
GAATCACCCTGTTCGATGACATtgaattggaacaagattgccGTCAACCT
GTTACTAGTGACTGGGAAAAGTGAAACTGCAACATCGAAATTCAAAGGTG
AGTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTGGCAGCAA
TATACACCATTGATGgtatttgtttttcattttagatATCCGTTATCAAA
TTTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATATCAGCGAA
TAGATTACAAGCAGAATCCATAGACAAGCTATTTTGGAAACAGGCTGATT
ATCATAGTAGAAGTCATCATGTGCCGTCATTTGGTTGTCTACATTTTGCT
CGTTCTGGCTTCTCTCTACCGAAGCACACACTCAGCTGGTACTACACCTG
GTATTAAAGAAGTCTTTGTTGGAAGATGTTGGCAATATCAAAGCATCTCT
GAACATAACAAACTACCTGAATTAAAAGTGAACATAAACTGTACAAAATT
ATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAAGATCCTTGTACTGTTG
GGGTAGATGATTACAAGACGTTCTTTGATATGTTACATACCTCTCGAAAA
ATCAAGAATGCTTTGTTTTGGTCTGGTTTGCATGACTTGGTAACTGACTT
CACCTTCATAAATGATGATTACATTGTACTGGAAGATACACTTACAGGGT
ACCTGCTAAACAATCTTAACTGGTGCGGTGGAACGGACGCAGATGGACTA
AATTCAACATCTTGTTCGAAAACGTGCAACGTGATGACACCTGCTTGGAC
ATTGGCATCTTCAGAGTTCGCTAAACGATCAACTGAAACAGCCAAAGTTC
TCTTGAACGCGACACGTGCTAACAACAAAGACGCATATGCTGATGGCAGT
TTCTTCCGAACTGTTGAAATGCCCGAACTGCAAGTGGATAAACTTGTCGT
ATATTTAGCTTCCAGTATTGGTAAAGAGGTCAGGGAAAGATGTGCGGATT
CGATTTCGATGGAAAATATACGGGCTGATGCGGAAGCTAAGAATATCCAA
GTGGAATGTATTGATCAACCAAGCCTGGTACTCAATGTTTATTGTTTGAA
GTACCCAAAAGCCAAAGAATGTGTCAACAAGGATAACTTTCGAAGCGATT
CAAACGCCGATAAAGAAGAAGCTAGGAAGTGGATGATAGTTGGTATTGTG
TTTTGCACACTGTTTGTTGTCTTCTCTCTCACTGCACTCATTGCATGGAT
CCTCAAACATAAACAATCCAAACATCGAACTGCTGTCCAAATGACCAAAA
GTGGTGAAGTCATCGCTAACCCTCAAACCATTAACAACAATGTCTAATTC
CCTACCCCTAACTACTTACTCACACTCATAATATTCATTTTGGTGTAATT
TTTATAATGATTTTGTATGGGAgggtttgattttttacaaggttttttta
tattttgataataaaatgGTGTTTGGTGTAAGTCTATCAAATTATATTTT
CATCCTTTCGAATTTCGAGTCGTTAGCTAATATCTTCCATTCGTTCACTC
AATATCGTGAACATCAGAAATTAGacaaatttttgctttaaaacatCGAG
TTTAATGAAGCCAAAAAGTTGACTCCTGCActtttattgttgttcaaaAA
ATGATGTCATTGTTGAGCTTATCAACAATCATCAAGCCTGATAGCTTTCA
AAAAGAGTCTTTTCCAAATATTGGTAAGGGAGGGAGAGAAAAAACAATCG
GGGCTTGGTCAAGGAAGGCATATTGAATTAATTCCTAATCATTAAACCCT
GTGTGCATATTCAAAGTTAATTGAGTACTTATGATCGACTAACATAAACT
TTTTGGGACTAATTTCTCACACAGGTTGTGGAAAACCGTTTGTTTGATTT
TGGTAGCCGTGGTGGCTGTTCTAATCGTTTACATCACGATCAGTCTCGTG
CACCGTGCAGTGTGTTACAAACCGGGTGATTACAAATATTCACATAGCTG
GTCTTTCTCAAAGAAACCCATGCTGCAGGACGATGAGGTAGAAAATAATA
ACGATATTGAACGTGTGGTGTGAGACCTGCTTTGTCATAAAAAGGAAAAC
TGCAACAGTATATTAACCTGAAGTTATGGTTAGTTTTTGGCAGGAGATGA
CAGGTGGAGGATGGAGGGTTCTACTTCGCGTCACTAAGCCCACCGCTGTA
TTCACCAGCCGTCAAAAGATATCTAAGAGAACAAGTGCTCTGTATTATAT
GACGGAACGAACACTTTTACCAAGAGACATTCAAGTTATGCAATGTTAAT
TATAATTTGATTCACAATTTTTCTGACAAAAGAAGAAACTGTGtataaag
atattttaaatatcCGGGATTTCAGTTTATTCAAGCTTCTTTAAAGTATT
GTAAAATTAGATGTACGATTTATTAAGGTAGAAATATTAATGAAGATTTA
TGCTTGAAATATGTTTATTGATA
Run BLAST on NCBI

transcript from alignment at sc0000007:1297246..1308986-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001255 ID=TCONS_00001255|Name=TCONS_00001255|organism=Clytia hemisphaerica|type=transcript|length=11741bp|location=Sequence derived from alignment at sc0000007:1297246..1308986- (Clytia hemisphaerica)
AAACTGTACAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGG ATCCTTGTACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTA CATACCTCTCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGA CTTGGTAACTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTG ATACGCTTACAGGGTAAGATCTTTGTTGAACCTGATCGAGAATTTCTAAT ATACCTTAGTCCAAAATAACCCAATTGTGCTTTTTTCTCGAGTTCGATTT TAATTTTTCATATAAGAAATTTTTTTTGTGATTGATCTCCAGGTACCTAC TAAACAATCTTAACTGGTGCGGTGGAACGGACGCAGATGGACTAAATTCA ACATCTTGTCCGAAAACGTGTAATGTGATGACACCTGCTTGGACATTGGC ATCTTCAGAGGTACGAGGTATGTTTTTACCATCGTAAACCTTTTCAAAAG TTCCTGATATTATACTATATATTTTTATTTTTTATTAAAAATCTTACAAA CTGATCTCGTGTGAACTTTTTCTTCGTTTCATAGTTTGCTAAACAAGCAA CTGGCGTATCGAAAGTTCTCTTAAATGCGACACGTGCTAACAATAAGGAC GCGTATGCTGATGGCAGGTTTGTTACACATTTCTGTCAGTTGTGGTTCTC TGTTTTCCAATATTCGTGATTGTCGTAGCATTAGAAAGTCGCTAAGAAAA CCTCTTTATCATAGTGAAAAGATGAAGTACCTACCAAGCAATATCCGCTT TTTTGAATTAAGCAGTGCTCTCAAGAGCAGATTTTTCTAAATTTATAATT TCAATGTTGTGTAGTTTCTGCATAAGAAAAGTGAACGCTACAAATTGTTG TTGATTTTATTCGATTAGGGCTCAAAAGTTACGCCCAGTAAGCCCGCTAC GCCCACGTGAAGCACGTAGTCGAAACGTGATCGTATTCGTTAATTTTATT ACAATATACAAATTAGTCCTGATTTATTTCATGCTAAAGGATAAATATTT AGTATCTTTCAAAAATAATAATTTGATTAGTTGCTTTCACTTTTGATTCT TGTTTCAGTTTCTTCCGAACTGTTGAAATGCCCGAACTGCAAGTGGATAA ACTTGTCGTGNTGTTTCAGTTTCTTCCGAACCGTTGAAATGCCAGAACTG CAAGTGGATAAACTTGTTGTATATTTAGCTTCCAGTATTGGTAAAGAGGT CAGGTACGTAAATTACCATGCTACAATATGAAAATATATAGCGATTAGAA TTATGTTTATAATGTTGATGTCCCTTCATCCTTTATTCTTTGCATTCTCT TGCCTGCTATTGCATTTTACTNTTGATGTCCCTTCATCCTTTATTCTTTG CATTCTTCTGCCTGCTATTGCATTTTACTCTCAGGTATCTGATAAATTTG AGTTTGAAAGGATTGGCGAGTTGTATAAAATATAATAATTGACAGAATTG ACAAGCGAGGGTAGGGTCGTATCAAGGCACCTTAGATCTCGGAATTTGAT AAGGAAATTGTAATTTTCCAATTCTCTCTAACTACAGGGAAACGTGCAAT GACTCAATATCAATGGAAAATATACGGAAAGACGCAGAATCACGAAATAT TGCTATTGAATGTTTTGACCAACCAAGGTGACCAATAATAAGAAATCCTT TTGTTTATGTTTTATCTTTAAAGCTTCAATGATCTAACTGACTGGAGCCT ATAATTTATTTTAAATTTAATGAGTTTTTATCTTGTCGAGCATAGATATC GATTGCTCTCGACAAAAACAAAGAGCTATCTTCGATATTTCAATCGATAT TACTTTTACCATTTTCCAATTTTCCTTAATTGCAAGCTTGGTATTGAACG TATATTGTTTGAAGTACNATTTTCAATCTATATTTTCCACTTTTTCTTAT TTCGCAAGCTTGGTATTGAACGTATTTTGTTTGAAGTATCCAGCGGCAAA GGAGTGTGTGAGAAGAAATACGCTGTTGAGCAAGGATATTCATCACGCCA AACAAATATCAACTCCTGAAGATGAAGTCAAGTAAGTTGTGTGAATTCAA AACGATCTTAAGAATTTCTTTATATTATTTACGCGCATTACACTGTCCGG CATTGAGACTTGCAGATGGTGNGCTTTTTATTTAACTATAGTTCGTATGC TTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTAT GCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGT ATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTC GTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGT TCGTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATA GTTCGTATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTA TAGTTCGTATGCTTTTGCAGGCTTTGGAAGACTGTTTGCATCGTTTTGAT CGGAGTATGTGGGATACTTTTGATGTATATTGTGATGACCCTTGTTCATC GATCCGTGTGTGTTGGTAAAACTTCGAACTTCAAGTATCCTCATACTTGG TCCATGTCCAAGAAACCGATGCTCTCCAATGATGAGATTGACAACAATAA TGACTTGGAACGCGTAGTGTGAAATTTGTTCGCAATCAAAAGGAAGTATT ATAAGATGGCGCTGAAATGATTACGCACGCCATTGAAACAGGGTTGTTGC GAGTTCGAAAGGTCAAAGAAATCGGCTTCAAAGTTAGCAATTGAAGAATG AGATTCACCAAGCCATGGTATCGAATCGATTCTCAAAATCAACTCAAAAG TGGTTTCGCTAATATGCATTAGGCTTCTGCCGGACAGGGCTATGATTAAT TGAAAAACATACGAAATAAATAATAAGGATGATAAAAAAGACAATTTGTA GATAGCGATTTCGAAGTTTGTATGTAAGTTCGCAAGAATGTTGTTATTTG ATGATTTTACTTTTCTTTCTGTAAATAATTTAAAGAATTGTATGTAAGAG ATATATGTATTTCGGAAGTAGTTTCTAACTGTATTGCTTCATATCATTTG GATTTAATACTTCCTGGTTTGTATGATGATTTTGCTACGTAGCAAGGTCA AACGGTTAAGTGGGATTTATTCAATATAATGTTTTCCATATAAAAAGCCT TTGAATCACCCTGTTCGATGACATTGAATTGGAACAAGATTGCCGTCAAC CTGTTACTAGTGACTGGGAAAAGTGAAACTGCAACATCGAAATTCAAAGG TGAGTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTGGCAGC AATATACACCATTGATGGTATTTGTTTTTCATTTTAGATATCCGTTATCA AATTTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATATCAGGT GAGTTTAGATAAACACTTAACAAAGGAAATTGGCATTTCTTTAATGTAGC GCGAAATTGTTATTGTTTTTGTTGAATTTTAAAAGTTTTGCGGTTTATCA CTTTCGCAATTTCATGCTATTATTTAAGTACAGAAAGNGTTGAATTTTAA AAGTTTTTGCGGTTTATCACTTTCGCAATTTCATGCTATCATTTAAGTAC GGAAAACTTTTGCATTGTTCATTTACTATGTAGTTGATATGGGATAAGCT CTTCAAAAAAACTCCAATTCTTATCTTGTTCTAATCAAGGGGAAGATCTG AGGGTGCTTACCCTAACTCTCTCATGGTGAGATCAAAAGGGGAAAAAAGA AGAATTTTTTAACAGTTAAAGCCATCATAAAAAGGCGTCCTTTTTGTTTT CATTTTCTCACTGCGTGATCTCGCACATTGATGGTCGAATATAATCAATA AGAAAAATCCACAAGAGAGCTCCCTATTCGTTGCACCTGCTATGTATATT ATGAACCAATTTCTTTAATCATCAATTTTGTATGAGAACCAGTCAGAGAA GACTCTTCCTTCCTTANGTTCGATGACATTGAATTGGAACAAGATTGCTG TCAACCTGTTACTAGTGACTGGGAAAAGTGAAACTGGAACATCGAAATTC AAAGGTGAGTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTG GCAGCAATATACACCATTGATGGTATTTGTTTTTCATTTCAGATATCCGT TATCAAATTTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATAT TAGGTGAGTTTAGATAAACACTTAACAAAGGAAATTGGCATTTCTTTAAT GTAGCGCGAAATTGTTATTGTTTTTGTTGAATTTTAAAAGTTTTTGCGGT TTATCACTTTCGCAATTTCATGCTATCATTTAAGTACGGAAAACTTTTGC ATTGTTCATTTACTATGTAGTTGATATGGGATAAGCTCTTCAAAAAAACT CCAATTCTTATCTTGTTCTAATCAAGGGGAAGATCTGAGGGTGCTTACCC TAACTCTCTCATGGTGAGATCAAAAGGGGAAAAAAGAAGAATTTTTTAAC AGTTAAAGCCATCATAAAAAGGCGTCCTTTTTGTTTTCATTTTCTCACTG CGTGATCTCGCACATTGATGGTCGAATATAATCAATAAGAAAAATCCACA AGAGAGCTCCCTATTCGTTGCACCTGCTATGTATATTATGAACCAATTTC TTTAATCATCAATTTTGTATGAGAACCAGTCAGAGAAGACTTTTCCTTCC TTGAAAATCTTGTTTTCATCGACACCACCTTATGATCTACCATTCTAATT TTTGTTCAATTTCTTCTTCATTTTTCTCTCTCATGTCAATATTTTTATTT TATTGTCTTGTTCATTTGATTGTCGAATGTTTTATTATTTTGTTCATCAC CTTAACTAAAGAGGATTGCTGCTCATAATTCCTGACAGTAAAGTCGCTCC TTTGTTTTGCCGGGGATGAAAACTACTTTAACTGCTTCTGGTCACCCTCT TTTCTCAGGAGAAGAGAAAACCTCAACGAATTACTTTTTCCATCCATTGT TTCTTCATTTTTTAATAATCGTATATCCCTCAGAACATAATAAAGCAGCT GGTCAAACCCAGAGACATCTTACAAATTTCAAAACAATGTAGCGTTGTTA CAAATGGAGAAAGATTATTCCGTGATATACTATCAAGTCGTTTCATGTAC ATCTCATTAAAGAACAGTGTAGTATTTTCTTCTGATTAATACCTTGTCAT GTTTCACCGTATGTTATTAATGAGCTCTTCAAATACATAGTTAATTGACA GATAATTAAGTTGGTTAATTGATACCCATTGCTTTTGAATGAAGATCCCT TGTTGTGATATTATGGGAACAAAATACGGTCAGGTGCAGGAAGTAGATCT CATTTAGATCATATTCTCTCGCATGGTCGGCTGGATGCAGTGCTCTATCT TCGATTGTTGTACATACATAGTTTTCGTTCTGTTTGCATGAAGGATTCTT GTGTTGTGATAACAGTCTTTCAATGATGGTGTGATTTGCATTTCATATTT ATTTGCGATGATAGCTTTCCCTTTGCCTATTTGAAATGTACTTTGTCAAC AATAAGACTCAGGGGAATCTTTTCATTTATTGATATTAAGATTTTGGTTG GGGTTCTCTTGCTGTTGTCTGTTTGACTGGTGTACATTATGTAATGACAC CCCGACGTGTGCTTAGTAAGAGGTACCTCACTGCGATTTTACTCTGTTAA TAAGATTGTTTGGTACTCTAACGACCTATGATCTCTTTGGAATTTGCACT CTCAAACTGTGCTTTACAATGGAAGGATACTGTGAAATTTAAATTGATGA CATTGAATTATTTTCTTCTGGTTCCTGATGTTTTTGTTCATTTCGTCATT TTTCTCAGATCTGTTTTTATTGTCACTTCAAACAATTTTGTCTCTCTAAA CATCAGTTTTTAAAAACCTACTCGACACGGTTTTAAAAGCATACATCAGT CAGTTCACGAGAAAATCACAGAAGGTCAGTCCGGAAATTTTATGCTGAAT TATTATCATCTGACTTCCTTTTAATTTTTGTCTATTTCTCTTTAAAGCGA ATAGATTACAAGCAGAATCCATAGACAAGCTATTTTGGAAACAGGTATGT TGAGTTTTGTTCTTATAGATAGTACAACATGACATCCCGATATTTTGAAG TTGTCACGGATCACTTCTAATTATATAGGAAAGTTGGTTTCTTTGAAAAC TTTTGTCATCAGTCTTTTTCTTACAATCATTATCACTAAGACTTTGTGAA AAGTTAAAAAAATCTTTGGGTTAGTTTGTTGATGTATCAAAAGACAAGTG TAAAATGGATCAAGTTCCACAAGTGAAATAAGAGATCGATCATTTCTCTT TAAGTAAAGAAAGCTCCACTCATAATCTGTCATTATAATCAAGAATATAC TATTTTTTGCCGTCATCAAATAAGACTTATATCTCGATCAAAAGTATCAG TTTAAAAAGAACAGATGTCATTCCACACTTTGTTTCTCTAGGCTGATTAT CATAGTAGAAGTCATCATGTGCCGTCATTTGGTTGTCTACATTTTGCTCG TTCTGGCTTCTCTCTACCGAAGCACACACTCAGCTGGTACTACACCTGGT ATTAAAGAAGTCTTTGTTGGAAGATGTTGGCAATATCAAAGCATCTCTGA ACATAACAAACTACCTGAATTAAAAGTGAACATAAACTGTACAAAATTAT GGCTGGCTTTTTACGATTCGTTCGCTTTCAAAGATCCTTGTACTGTTGGG GTAGATGATTACAAGACGTTCTTTGATATGTTACATACCTCTCGAAAAAT CAAGAATGCTTTGTTTTGGTCTGGTTTGCATGACTTGGTAACTGACTTCA CCTTCATAAATGATGATTACATTGTACTGGAAGATACACTTACAGGGTAA GTTCTCCATGTGTACCATTTGAACATCACTTTCAAAGAAAGATTTATCCT GTTAAAACTGCCCATTCCCAATTAGCTCGTACAGCATCGCCCATTTTTCT GTTATTTTTTACGTGAAACTTTCAGGTACCTGCTAAACAATCTTAACTGG TGCGGTGGAACGGACGCAGATGGACTAAATTCAACATCTTGTTCGAAAAC GTGCAACGTGATGACACCTGCTTGGACATTGGCATCTTCAGAGGTACGAG GTATGTTTTTACCATCGTAAACCTTTTCTTTGTAGTCTAAATAGAATAGT GCTCAGTACGATTGGTACATGAAAAGGAAATTACGTCAAAAAGTTTTCAG CCAGTAAATTGTCTTCGGATTTTTTTAGACTCTGGATGTTCGCTTACATT GAAAACCGACATATTGTTAATTGGTTTTATTTTTATTAATCCTTTTTTCA GTTCGCTAAACGATCAACTGAAACAGCCAAAGTTCTCTTGAACGCGACAC GTGCTAACAACAAAGACGCATATGCTGATGGCAGGTTTGTCCGTTTTTCT TGTTCTTTATCCGCAGAAATATTTGCTTTTGCTTACTACCATCGCAACAG ACAGTCTCTGACCTCCTCAATCCTATTAACCCTGATTATCGGTTTCTACG TAGACAGCTCTATATGACGAGGCTTTTTGCCAAAGAGATTAAACTTTCAT TATTTTTCACTTTCGATTCTTGTTTCAGTTTCTTCCGAACTGTTGAAATG CCCGAACTGCAAGTGGATAAACTTGTCGTATATTTAGCTTCCAGTATTGG TAAAGAGGTCAGGTACGTATTCTTAATTTATTGAATTTTGACTTTCTTGG AATATATCCAGGAGTTGGTTGTAAAGGGAAGGGAAGGATTTTTAGAATTC TTTGTTTTGTCTCCATAGCATAGATCTCATTACACTTTAATTATTGGAAA ATTAGTTTTTGCTACCCACAAAAGGAAATTGACCTCTCATTAAAACCCTT CATGAACATTCAAAAAACAAATTATGAAAAGCCTTTATTTCTAAATTTTG CCATCTGTTGTAAGGTTATATAATGATCAGGCTTAATCAAATGACCAATC GACGTCAATTTCTGAATGAATTTTCGCGATGCTAAACTGCTTCCTGTTTT GTATATAATGTTAATTCAATTATTGAAAAAAATGAAAAAATCGATTTTAT TAAGATTAAGCCTCTTTTGGCTTACGTTGTAAGGGGGAGGGCTTTGTGTT ATTGCGAAATCCTTAATCCCATGTTCGTTTGAGATTCTGTCGCTGAATCC TACAACTTCCTGTCTTCCAGAATAAAAAACAATACAACTTTTGAGGGTAG AACCGTTCATTTTCTCTTCAATACTTGAAGTCACATCTTGCAGTATATGA TGTAATAAAAGTTTGAATTCTTTCTCTCCAGGGAAAGATGTGCGGATTCG ATTTCGATGGAAAATATACGGGCTGATGCGGAAGCTAAGAATATCCAAGT GGAATGTATTGATCAACCAAGGTAAATGTCTGACGAACCTCTTTCTTGAG TGTTGAAAGCAAATACCTTTCCTCAATTTAACACCCTCTCTAACCTTAAG TACTTTGAAAGGTGTTCCTTGGTAATTTCATTCCATTACAAATATCATCT CTTGCTTTCTTAAAAAACTTTCATTCGAAAAGACTTCTATCTTTATTCTT TGGCCAGGAAATGTTTAGTAATTAATAAAGAACATTTTCGACATTTTTTC ACTTCTTTCCTTCTTCTGACTGCCCATACATCATGTCTTTAATCGCAGAT TTCCTTGCCAAGATTTGCAACTTCTCAATCGAAATCTTTAATGTATTTAT AGTTTTCAAAGCGACAAAAGAATTTCTATAGCACATAATAACACCGACTT TATTGATACTGAACTTTGGGAAGTCGGTTTTAACTATCACATTCACTTTC GATGGTTGTCTTACAAGCTTGTGAAAATCCTACTAAGTTTTTGAATATCT GTTAAGATCGCTTCCCACTCTGCTTAAAGCTTTCTTCTACTAAATAATTA AGCATCGCACGTTGTTCAACTACTAAAAAAGCTGATTGGAAAGCAAACTT TAGTAGTAATTCTCCTAACGCCTAAAATTGAAAGGGACATTAACGTTTAA GTCTACCTGGAAATGCTATGAAATGATTTCATGAGAAAATCACTGAGGGC CACATTTAATCGGATTTGCATATCCAAAAATACCCATGCCACTCTCGCAT ACCTCTCAGATCAACATTTTAAAGCTAACTGCACTCAAATGCCCTTATCC TATCCACTTTCAGCCTGGTACTCAATGTTTATTGTTTGAAGTACCCAAAA GCCAAAGAATGTGTCAACAAGGATAACTTTCGAAGCGATTCAAACGCCGA TAAAGAAGAAGCTAGGTAAGCAGTAAACCTTTTACGGGATTGACTTCTAA GGGCCCTTGCATACATCATCAATTTAGTAATTGAAACCGCTCTCACTCCC AACTTGGACTACCTGCACATATTTGAAGTGTTTTTAAAGTGCCTGACTTG GACTGTTATTCATATTACAACAATTAAAAGAGGAATTTCAAGAGTACTGT TAAACAAGTTTTGTCCTTGTTTAAACGTGTACCTCTTGACAATTCACGGA ATTTAAAAGCAATCATTGATGATATGAAAGAATATATACCTTATTATGGT CCATTACATGAATCTATCCCATTTTTGATCTCGCTTATCTATATGTCATG CAATTTCATCATCTTATAAACGATTCAACTCAGGACATTGAAATTGGTGA CCATCATTTTATCAATCACTCTCTTCGTTACCTTCCTGGGCTGTGTACTG TTGTTAGCCTTCCATCATCGTAAAACTATTCGCAAAAGAGCATTAAATCA GAAACATAATAATAAGACCACAGACAATAACAATTCAAATGAACTTTTAT CAAATGAACCAAATGGAAAAACAATGTGGTTATAGTTTCATGTGGTGTTC ATGACGCTGAGGTTATGCATGTCCTCCTCACAACCTGTGTCTTAACCTTC CCTAACCTCCATGCACCTTGTAGTTTACACTCGATTGTTCGAACCTACCC TGCCTGCCCTTTTTAGCATGTTCTGTTTGAAAATGATGTGAGATAGCGTT TCAAAGTCCCGTGCTAACTGGGAGAGGAAGAATCCCCTTCGCTATTTCTT TAATTTCAATTTTTGAATCAACTCGCACTGGATTTTTTGAAGTTGAAAGA TATTGATTTCGAAATCTGAAGCTAATGAAAGACTTTCCTTCCGTTTAATC ATGCCCTTTATTTCTCAACCCTTTCTGGGTAAAAACATGGTCTATGGGGC ATGGGTGTCAACGTAATGACGAGTGCATGAATCGGGCTGTGAAGCCCTCA GTTAATTGTTAATGCATTCATTTTCATTCATTGTTATGTATAGGAAGTGG ATGATAGTTGGTATTGTGTTTTGCACACTGTTTGTTGTCTTCTCTCTCAC TGCACTCATTGCATGGATCCTCAAACATAAACAATCCAAACATCGAACTG CTGTCCAAATGACCAAAAGTGGTGAAGTCATCGCTAACCCTCAAACCATT AACAACAATGTCTAATTCCCTACCCCTAACTACTTACTCACACTCATAAT ATTCATTTTGGTGTAATTTTTATAATGATTTTGTATGGGAGGGTTTGATT TTTTACAAGGTTTTTTTATATTTTGATAATAAAATGGTGTTTGGTGTAAG TCTATCAAATTATATTTTCATCCTTTCGAATTTCGAGTCGTTAGCTAATA TCTTCCATTCGTTCACTCAATATCGTGAACATCAGAAATTAGACAAATTT TTGCTTTAAAACATCGAGTTTAATGAAGCCAAAAAGTTGACTCCTGCACT TTTATTGTTGTTCAAAAAATGATGTCATTGTTGAGCTTATCAACAATCAT CAAGCCTGATAGCTTTCAAAAAGAGTCTTTTCCAAATATTGGTAAGGGAG GGAGAGAAAAAACAATCGGGGCTTGGTCAAGGAAGGCATATTGAATTAAT TCCTAATCATTAAACCCTGTGTGCATATTCAAAGTTAATTGAGTACTTAT GATCGACTAACATAAACTTTTTGGGACTAATTTCTCACACAGGTTGTGGA AAACCGTTTGTTTGATTTTGGTAGCCGTGGTGGCTGTTCTAATCGTTTAC ATCACGATCAGTCTCGTGCACCGTGCAGTGTGTTACAAACCGGGTGATTA CAAATATTCACATAGCTGGTCTTTCTCAAAGAAACCCATGCTGCAGGACG ATGAGGTAGAAAATAATAACGATATTGAACGTGTGGTGTGAGACCTGCTT TGTCATAAAAAGGAAAACTGCAACAGTATATTAACCTGAAGTTATGGTTA GTTTTTGGCAGGAGATGACAGGTGGAGGATGGAGGGTTCTACTTCGCGTC ACTAAGCCCACCGCTGTATTCACCAGCCGTCAAAAGATATCTAAGAGAAC AAGTGCTCTGTATTATATGACGGAACGAACACTTTTACCAAGAGACATTC AAGTTATGCAATGTTAATTATAATTTGATTCACAATTTTTCTGACAAAAG AAGAAACTGTGTATAAAGATATTTTAAATATCCGGGATTTCAGTTTATTC AAGCTTCTTTAAAGTATTGTAAAATTAGATGTACGATTTATTAAGGTAGA AATATTAATGAAGATTTATGCTTGAAATATGTTTATTGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000669XLOC_000669Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001255-exon-sc0000007-1575043694:1308774..1308986TCONS_00001255-exon-sc0000007-1575043694:1308774..1308986Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1308520..1308644TCONS_00001255-exon-sc0000007-1575043694:1308520..1308644Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1308320..1308402TCONS_00001255-exon-sc0000007-1575043694:1308320..1308402Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1307734..1307817TCONS_00001255-exon-sc0000007-1575043694:1307734..1307817Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1307310..1307399TCONS_00001255-exon-sc0000007-1575043694:1307310..1307399Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1306906..1307028TCONS_00001255-exon-sc0000007-1575043694:1306906..1307028Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1305489..1306466TCONS_00001255-exon-sc0000007-1575043694:1305489..1306466Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1302793..1302839TCONS_00001255-exon-sc0000007-1575043694:1302793..1302839Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1301991..1302395TCONS_00001255-exon-sc0000007-1575043694:1301991..1302395Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1301744..1301861TCONS_00001255-exon-sc0000007-1575043694:1301744..1301861Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1301453..1301535TCONS_00001255-exon-sc0000007-1575043694:1301453..1301535Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1301175..1301258TCONS_00001255-exon-sc0000007-1575043694:1301175..1301258Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1300466..1300555TCONS_00001255-exon-sc0000007-1575043694:1300466..1300555Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1299572..1299673TCONS_00001255-exon-sc0000007-1575043694:1299572..1299673Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1575043694:1297246..1298543TCONS_00001255-exon-sc0000007-1575043694:1297246..1298543Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1308774..1308986TCONS_00001255-exon-sc0000007-1510915933:1308774..1308986Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1308520..1308644TCONS_00001255-exon-sc0000007-1510915933:1308520..1308644Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1308320..1308402TCONS_00001255-exon-sc0000007-1510915933:1308320..1308402Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1307734..1307817TCONS_00001255-exon-sc0000007-1510915933:1307734..1307817Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1307310..1307399TCONS_00001255-exon-sc0000007-1510915933:1307310..1307399Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1306906..1307028TCONS_00001255-exon-sc0000007-1510915933:1306906..1307028Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1305489..1306466TCONS_00001255-exon-sc0000007-1510915933:1305489..1306466Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1302793..1302839TCONS_00001255-exon-sc0000007-1510915933:1302793..1302839Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1301991..1302395TCONS_00001255-exon-sc0000007-1510915933:1301991..1302395Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1301744..1301861TCONS_00001255-exon-sc0000007-1510915933:1301744..1301861Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1301453..1301535TCONS_00001255-exon-sc0000007-1510915933:1301453..1301535Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1301175..1301258TCONS_00001255-exon-sc0000007-1510915933:1301175..1301258Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1300466..1300555TCONS_00001255-exon-sc0000007-1510915933:1300466..1300555Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1299572..1299673TCONS_00001255-exon-sc0000007-1510915933:1299572..1299673Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1510915933:1297246..1298543TCONS_00001255-exon-sc0000007-1510915933:1297246..1298543Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1308774..1308986TCONS_00001255-exon-sc0000007-1491911889:1308774..1308986Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1308520..1308644TCONS_00001255-exon-sc0000007-1491911889:1308520..1308644Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1308320..1308402TCONS_00001255-exon-sc0000007-1491911889:1308320..1308402Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1307734..1307817TCONS_00001255-exon-sc0000007-1491911889:1307734..1307817Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1307310..1307399TCONS_00001255-exon-sc0000007-1491911889:1307310..1307399Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1306906..1307028TCONS_00001255-exon-sc0000007-1491911889:1306906..1307028Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1305489..1306466TCONS_00001255-exon-sc0000007-1491911889:1305489..1306466Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1302793..1302839TCONS_00001255-exon-sc0000007-1491911889:1302793..1302839Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1301991..1302395TCONS_00001255-exon-sc0000007-1491911889:1301991..1302395Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1301744..1301861TCONS_00001255-exon-sc0000007-1491911889:1301744..1301861Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1301453..1301535TCONS_00001255-exon-sc0000007-1491911889:1301453..1301535Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1301175..1301258TCONS_00001255-exon-sc0000007-1491911889:1301175..1301258Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1300466..1300555TCONS_00001255-exon-sc0000007-1491911889:1300466..1300555Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1299572..1299673TCONS_00001255-exon-sc0000007-1491911889:1299572..1299673Clytia hemisphaericaexon
TCONS_00001255-exon-sc0000007-1491911889:1297246..1298543TCONS_00001255-exon-sc0000007-1491911889:1297246..1298543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1297246..1308986 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.560165 0.449203 0.370639 0.327644 0 0.373987 0.989186 1.32732 0.479172 0.908236 0.661621 1.09943 0.94943 1.526 0.785626 0.751518 0.701145 0.556498 1.10743 0.685556 1.2561 0.895791 0.468882 0.583493 1.39029 1.23465 0.249642 0 0.521673 0.399952
Blast
BLAST of TCONS_00001255 vs. Swiss-Prot (Human)
Match: CD38 (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 OS=Homo sapiens GN=CD38 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.498e-27
Identity = 79/260 (30.38%), Postives = 125/260 (48.08%), Query Frame = 2
Query: 1832 SAGTTPGIKEVFVGRCWQYQSISEHNKLPELKVNINCTKLWLAFYDSFAFKDPCTVGVDDYKTFFDMLHTSRKIKNALFWSGLHDLVTDFTFINDDYIVLEDTLTGYLLNNLNWCGGTDADGLNSTSCS---KTC--NVMTPAWTLASSEFAKRSTETAKVLLNATRANNKDAYADGSFFRTVEMPELQVDKLVVYLASSI--GKE-VRERCADSISMENIRADAEAKNIQVEC--IDQPSLVLNVYCLKYPKAKECVNK 2581
              GTT    E  + RC +Y  I      PE++ +++C  +W AF  +F  K PC +  +DY+    +   +      L WS + DL   FT +  D   LEDTL GYL ++L WCG  +   +N  SC    K C  N ++  W   S  FA+ + +   V+LN +R+     +   S F +VE+  LQ +K+    A  I  G+E  R+ C D  +++ + +    +NIQ  C  I +P   L   C+K P+   C ++
Sbjct:   52 GPGTTKRFPETVLARCVKYTEIH-----PEMR-HVDCQSVWDAFKGAFISKHPCNITEEDYQPLMKLGTQTVPCNKILLWSRIKDLAHQFTQVQRDMFTLEDTLLGYLADDLTWCGEFNTSKINYQSCPDWRKDCSNNPVSVFWKTVSRRFAEAACDVVHVMLNGSRSK---IFDKNSTFGSVEVHNLQPEKVQTLEAWVIHGGREDSRDLCQDP-TIKELESIISKRNIQFSCKNIYRPDKFLQ--CVKNPEDSSCTSE 299          
The following BLAST results are available for this feature:
BLAST of TCONS_00001255 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD389.498e-2730.38ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 ... [more]
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