TCONS_00001254 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001254
Unique NameTCONS_00001254
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1284

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001254 ID=TCONS_00001254|Name=TCONS_00001254|organism=Clytia hemisphaerica|type=transcript|length=1284bp
GTACAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGGATCCT
TGTACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTACATAC
CTCTCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGACTTGG
TAACTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTGATACG
CTTACAGGGTACCTGCTAAACAATCTTAACTGGTGCGGTGGAACGGACGC
AGATGGACTAAATTCAACATCTTGTTCGAAAACGTGCAACGTGATGACAC
CTGCTTGGACATTGGCATCTTCAGAGTTCGCTAAACGATCAACTGAAACA
GCCAAAGTTCTCTTGAACGCGACACGTGCTAACAACAAAGACGCATATGC
TGATGGCAGTTTCTTCCGAACTGTTGAAATGCCCGAACTGCAAGTGGATA
AACTTGTCGTATATTTAGCTTCCAGTATTGGTAAAGAGGTCAGGGAAAGA
TGTGCGGATTCGATTTCGATGGAAAATATACGGGCTGATGCGGAAGCTAA
GAATATCCAAGTGGAATGTATTGATCAACCAAGCCTGGTACTCAATGTTT
ATTGTTTGAAGTACCCAAAAGCCAAAGAATGTGTCAACAAGGATAACTTT
CGAAGCGATTCAAACGCCGATAAAGAAGAAGCTAGGTTGTGGAAAACCGT
TTGTTTGATTTTGGTAGCCGTGGTGGCTGTTCTAATCGTTTACATCACGA
TCAGTCTCGTGCACCGTGCAGTGTGTTACAAACCGGGTGATTACAAATAT
TCACATAGCTGGTCTTTCTCAAAGAAACCCATGCTGCAGGACGATGAGGT
AGAAAATAATAACGATATTGAACGTGTGGTGTGAGACCTGCTTTGTCATA
AAAAGGAAAACTGCAACAGTATATTAACCTGAAGTTATGGTTAGTTTTTG
GCAGGAGATGACAGGTGGAGGATGGAGGGTTCTACTTCGCGTCACTAAGC
CCACCGCTGTATTCACCAGCCGTCAAAAGATATCTAAGAGAACAAGTGCT
CTGTATTATATGACGGAACGAACACTTTTACCAAGAGACATTCAAGTTAT
GCAATGTTAATTATAATTTGATTCACAATTTTTCTGACAAAAGAAGAAAC
TGTGtataaagatattttaaatatcCGGGATTTCAGTTTATTCAAGCTTC
TTTAAAGTATTGTAAAATTAGATGTACGATTTATTAAGGTAGAAATATTA
ATGAAGATTTATGCTTGAAATATGTTTATTGATA
Run BLAST on NCBI

transcript from alignment at sc0000007:1297246..1308981-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001254 ID=TCONS_00001254|Name=TCONS_00001254|organism=Clytia hemisphaerica|type=transcript|length=11736bp|location=Sequence derived from alignment at sc0000007:1297246..1308981- (Clytia hemisphaerica)
GTACAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAGGATCCT TGTACCGTTGGGGTAGATGATTACAAGACGTTCTTTTATATGTTACATAC CTCTCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTATGCATGACTTGG TAACTGACTTCACCTTCATAAATGACGATTACATTGTTATCGGTGATACG CTTACAGGGTAAGATCTTTGTTGAACCTGATCGAGAATTTCTAATATACC TTAGTCCAAAATAACCCAATTGTGCTTTTTTCTCGAGTTCGATTTTAATT TTTCATATAAGAAATTTTTTTTGTGATTGATCTCCAGGTACCTACTAAAC AATCTTAACTGGTGCGGTGGAACGGACGCAGATGGACTAAATTCAACATC TTGTCCGAAAACGTGTAATGTGATGACACCTGCTTGGACATTGGCATCTT CAGAGGTACGAGGTATGTTTTTACCATCGTAAACCTTTTCAAAAGTTCCT GATATTATACTATATATTTTTATTTTTTATTAAAAATCTTACAAACTGAT CTCGTGTGAACTTTTTCTTCGTTTCATAGTTTGCTAAACAAGCAACTGGC GTATCGAAAGTTCTCTTAAATGCGACACGTGCTAACAATAAGGACGCGTA TGCTGATGGCAGGTTTGTTACACATTTCTGTCAGTTGTGGTTCTCTGTTT TCCAATATTCGTGATTGTCGTAGCATTAGAAAGTCGCTAAGAAAACCTCT TTATCATAGTGAAAAGATGAAGTACCTACCAAGCAATATCCGCTTTTTTG AATTAAGCAGTGCTCTCAAGAGCAGATTTTTCTAAATTTATAATTTCAAT GTTGTGTAGTTTCTGCATAAGAAAAGTGAACGCTACAAATTGTTGTTGAT TTTATTCGATTAGGGCTCAAAAGTTACGCCCAGTAAGCCCGCTACGCCCA CGTGAAGCACGTAGTCGAAACGTGATCGTATTCGTTAATTTTATTACAAT ATACAAATTAGTCCTGATTTATTTCATGCTAAAGGATAAATATTTAGTAT CTTTCAAAAATAATAATTTGATTAGTTGCTTTCACTTTTGATTCTTGTTT CAGTTTCTTCCGAACTGTTGAAATGCCCGAACTGCAAGTGGATAAACTTG TCGTGNTGTTTCAGTTTCTTCCGAACCGTTGAAATGCCAGAACTGCAAGT GGATAAACTTGTTGTATATTTAGCTTCCAGTATTGGTAAAGAGGTCAGGT ACGTAAATTACCATGCTACAATATGAAAATATATAGCGATTAGAATTATG TTTATAATGTTGATGTCCCTTCATCCTTTATTCTTTGCATTCTCTTGCCT GCTATTGCATTTTACTNTTGATGTCCCTTCATCCTTTATTCTTTGCATTC TTCTGCCTGCTATTGCATTTTACTCTCAGGTATCTGATAAATTTGAGTTT GAAAGGATTGGCGAGTTGTATAAAATATAATAATTGACAGAATTGACAAG CGAGGGTAGGGTCGTATCAAGGCACCTTAGATCTCGGAATTTGATAAGGA AATTGTAATTTTCCAATTCTCTCTAACTACAGGGAAACGTGCAATGACTC AATATCAATGGAAAATATACGGAAAGACGCAGAATCACGAAATATTGCTA TTGAATGTTTTGACCAACCAAGGTGACCAATAATAAGAAATCCTTTTGTT TATGTTTTATCTTTAAAGCTTCAATGATCTAACTGACTGGAGCCTATAAT TTATTTTAAATTTAATGAGTTTTTATCTTGTCGAGCATAGATATCGATTG CTCTCGACAAAAACAAAGAGCTATCTTCGATATTTCAATCGATATTACTT TTACCATTTTCCAATTTTCCTTAATTGCAAGCTTGGTATTGAACGTATAT TGTTTGAAGTACNATTTTCAATCTATATTTTCCACTTTTTCTTATTTCGC AAGCTTGGTATTGAACGTATTTTGTTTGAAGTATCCAGCGGCAAAGGAGT GTGTGAGAAGAAATACGCTGTTGAGCAAGGATATTCATCACGCCAAACAA ATATCAACTCCTGAAGATGAAGTCAAGTAAGTTGTGTGAATTCAAAACGA TCTTAAGAATTTCTTTATATTATTTACGCGCATTACACTGTCCGGCATTG AGACTTGCAGATGGTGNGCTTTTTATTTAACTATAGTTCGTATGCTTTTT ATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTATGCTTT TTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTATGCT TTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTATG CTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCGTA TGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTTCG TATGCTTTTTATTTAACTATAGTTCGTATGCTTTTTATTTAACTATAGTT CGTATGCTTTTGCAGGCTTTGGAAGACTGTTTGCATCGTTTTGATCGGAG TATGTGGGATACTTTTGATGTATATTGTGATGACCCTTGTTCATCGATCC GTGTGTGTTGGTAAAACTTCGAACTTCAAGTATCCTCATACTTGGTCCAT GTCCAAGAAACCGATGCTCTCCAATGATGAGATTGACAACAATAATGACT TGGAACGCGTAGTGTGAAATTTGTTCGCAATCAAAAGGAAGTATTATAAG ATGGCGCTGAAATGATTACGCACGCCATTGAAACAGGGTTGTTGCGAGTT CGAAAGGTCAAAGAAATCGGCTTCAAAGTTAGCAATTGAAGAATGAGATT CACCAAGCCATGGTATCGAATCGATTCTCAAAATCAACTCAAAAGTGGTT TCGCTAATATGCATTAGGCTTCTGCCGGACAGGGCTATGATTAATTGAAA AACATACGAAATAAATAATAAGGATGATAAAAAAGACAATTTGTAGATAG CGATTTCGAAGTTTGTATGTAAGTTCGCAAGAATGTTGTTATTTGATGAT TTTACTTTTCTTTCTGTAAATAATTTAAAGAATTGTATGTAAGAGATATA TGTATTTCGGAAGTAGTTTCTAACTGTATTGCTTCATATCATTTGGATTT AATACTTCCTGGTTTGTATGATGATTTTGCTACGTAGCAAGGTCAAACGG TTAAGTGGGATTTATTCAATATAATGTTTTCCATATAAAAAGCCTTTGAA TCACCCTGTTCGATGACATTGAATTGGAACAAGATTGCCGTCAACCTGTT ACTAGTGACTGGGAAAAGTGAAACTGCAACATCGAAATTCAAAGGTGAGT ACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTGGCAGCAATAT ACACCATTGATGGTATTTGTTTTTCATTTTAGATATCCGTTATCAAATTT GACCGGATAGTGATCGAGACAAAATAAGGCATATTCATATCAGGTGAGTT TAGATAAACACTTAACAAAGGAAATTGGCATTTCTTTAATGTAGCGCGAA ATTGTTATTGTTTTTGTTGAATTTTAAAAGTTTTGCGGTTTATCACTTTC GCAATTTCATGCTATTATTTAAGTACAGAAAGNGTTGAATTTTAAAAGTT TTTGCGGTTTATCACTTTCGCAATTTCATGCTATCATTTAAGTACGGAAA ACTTTTGCATTGTTCATTTACTATGTAGTTGATATGGGATAAGCTCTTCA AAAAAACTCCAATTCTTATCTTGTTCTAATCAAGGGGAAGATCTGAGGGT GCTTACCCTAACTCTCTCATGGTGAGATCAAAAGGGGAAAAAAGAAGAAT TTTTTAACAGTTAAAGCCATCATAAAAAGGCGTCCTTTTTGTTTTCATTT TCTCACTGCGTGATCTCGCACATTGATGGTCGAATATAATCAATAAGAAA AATCCACAAGAGAGCTCCCTATTCGTTGCACCTGCTATGTATATTATGAA CCAATTTCTTTAATCATCAATTTTGTATGAGAACCAGTCAGAGAAGACTC TTCCTTCCTTANGTTCGATGACATTGAATTGGAACAAGATTGCTGTCAAC CTGTTACTAGTGACTGGGAAAAGTGAAACTGGAACATCGAAATTCAAAGG TGAGTACTTTCGAACTCTATTTTACCAATTTTCGACAAACGTCTGGCAGC AATATACACCATTGATGGTATTTGTTTTTCATTTCAGATATCCGTTATCA AATTTGACCGGATAGTGATCGAGACAAAATAAGGCATATTCATATTAGGT GAGTTTAGATAAACACTTAACAAAGGAAATTGGCATTTCTTTAATGTAGC GCGAAATTGTTATTGTTTTTGTTGAATTTTAAAAGTTTTTGCGGTTTATC ACTTTCGCAATTTCATGCTATCATTTAAGTACGGAAAACTTTTGCATTGT TCATTTACTATGTAGTTGATATGGGATAAGCTCTTCAAAAAAACTCCAAT TCTTATCTTGTTCTAATCAAGGGGAAGATCTGAGGGTGCTTACCCTAACT CTCTCATGGTGAGATCAAAAGGGGAAAAAAGAAGAATTTTTTAACAGTTA AAGCCATCATAAAAAGGCGTCCTTTTTGTTTTCATTTTCTCACTGCGTGA TCTCGCACATTGATGGTCGAATATAATCAATAAGAAAAATCCACAAGAGA GCTCCCTATTCGTTGCACCTGCTATGTATATTATGAACCAATTTCTTTAA TCATCAATTTTGTATGAGAACCAGTCAGAGAAGACTTTTCCTTCCTTGAA AATCTTGTTTTCATCGACACCACCTTATGATCTACCATTCTAATTTTTGT TCAATTTCTTCTTCATTTTTCTCTCTCATGTCAATATTTTTATTTTATTG TCTTGTTCATTTGATTGTCGAATGTTTTATTATTTTGTTCATCACCTTAA CTAAAGAGGATTGCTGCTCATAATTCCTGACAGTAAAGTCGCTCCTTTGT TTTGCCGGGGATGAAAACTACTTTAACTGCTTCTGGTCACCCTCTTTTCT CAGGAGAAGAGAAAACCTCAACGAATTACTTTTTCCATCCATTGTTTCTT CATTTTTTAATAATCGTATATCCCTCAGAACATAATAAAGCAGCTGGTCA AACCCAGAGACATCTTACAAATTTCAAAACAATGTAGCGTTGTTACAAAT GGAGAAAGATTATTCCGTGATATACTATCAAGTCGTTTCATGTACATCTC ATTAAAGAACAGTGTAGTATTTTCTTCTGATTAATACCTTGTCATGTTTC ACCGTATGTTATTAATGAGCTCTTCAAATACATAGTTAATTGACAGATAA TTAAGTTGGTTAATTGATACCCATTGCTTTTGAATGAAGATCCCTTGTTG TGATATTATGGGAACAAAATACGGTCAGGTGCAGGAAGTAGATCTCATTT AGATCATATTCTCTCGCATGGTCGGCTGGATGCAGTGCTCTATCTTCGAT TGTTGTACATACATAGTTTTCGTTCTGTTTGCATGAAGGATTCTTGTGTT GTGATAACAGTCTTTCAATGATGGTGTGATTTGCATTTCATATTTATTTG CGATGATAGCTTTCCCTTTGCCTATTTGAAATGTACTTTGTCAACAATAA GACTCAGGGGAATCTTTTCATTTATTGATATTAAGATTTTGGTTGGGGTT CTCTTGCTGTTGTCTGTTTGACTGGTGTACATTATGTAATGACACCCCGA CGTGTGCTTAGTAAGAGGTACCTCACTGCGATTTTACTCTGTTAATAAGA TTGTTTGGTACTCTAACGACCTATGATCTCTTTGGAATTTGCACTCTCAA ACTGTGCTTTACAATGGAAGGATACTGTGAAATTTAAATTGATGACATTG AATTATTTTCTTCTGGTTCCTGATGTTTTTGTTCATTTCGTCATTTTTCT CAGATCTGTTTTTATTGTCACTTCAAACAATTTTGTCTCTCTAAACATCA GTTTTTAAAAACCTACTCGACACGGTTTTAAAAGCATACATCAGTCAGTT CACGAGAAAATCACAGAAGGTCAGTCCGGAAATTTTATGCTGAATTATTA TCATCTGACTTCCTTTTAATTTTTGTCTATTTCTCTTTAAAGCGAATAGA TTACAAGCAGAATCCATAGACAAGCTATTTTGGAAACAGGTATGTTGAGT TTTGTTCTTATAGATAGTACAACATGACATCCCGATATTTTGAAGTTGTC ACGGATCACTTCTAATTATATAGGAAAGTTGGTTTCTTTGAAAACTTTTG TCATCAGTCTTTTTCTTACAATCATTATCACTAAGACTTTGTGAAAAGTT AAAAAAATCTTTGGGTTAGTTTGTTGATGTATCAAAAGACAAGTGTAAAA TGGATCAAGTTCCACAAGTGAAATAAGAGATCGATCATTTCTCTTTAAGT AAAGAAAGCTCCACTCATAATCTGTCATTATAATCAAGAATATACTATTT TTTGCCGTCATCAAATAAGACTTATATCTCGATCAAAAGTATCAGTTTAA AAAGAACAGATGTCATTCCACACTTTGTTTCTCTAGGCTGATTATCATAG TAGAAGTCATCATGTGCCGTCATTTGGTTGTCTACATTTTGCTCGTTCTG GCTTCTCTCTACCGAAGCACACACTCAGCTGGTACTACACCTGGTATTAA AGAAGTCTTTGTTGGAAGATGTTGGCAATATCAAAGCATCTCTGAACATA ACAAACTACCTGAATTAAAAGTGAACATAAACTGTACAAAATTATGGCTG GCTTTTTACGATTCGTTCGCTTTCAAAGATCCTTGTACTGTTGGGGTAGA TGATTACAAGACGTTCTTTGATATGTTACATACCTCTCGAAAAATCAAGA ATGCTTTGTTTTGGTCTGGTTTGCATGACTTGGTAACTGACTTCACCTTC ATAAATGATGATTACATTGTACTGGAAGATACACTTACAGGGTAAGTTCT CCATGTGTACCATTTGAACATCACTTTCAAAGAAAGATTTATCCTGTTAA AACTGCCCATTCCCAATTAGCTCGTACAGCATCGCCCATTTTTCTGTTAT TTTTTACGTGAAACTTTCAGGTACCTGCTAAACAATCTTAACTGGTGCGG TGGAACGGACGCAGATGGACTAAATTCAACATCTTGTTCGAAAACGTGCA ACGTGATGACACCTGCTTGGACATTGGCATCTTCAGAGGTACGAGGTATG TTTTTACCATCGTAAACCTTTTCTTTGTAGTCTAAATAGAATAGTGCTCA GTACGATTGGTACATGAAAAGGAAATTACGTCAAAAAGTTTTCAGCCAGT AAATTGTCTTCGGATTTTTTTAGACTCTGGATGTTCGCTTACATTGAAAA CCGACATATTGTTAATTGGTTTTATTTTTATTAATCCTTTTTTCAGTTCG CTAAACGATCAACTGAAACAGCCAAAGTTCTCTTGAACGCGACACGTGCT AACAACAAAGACGCATATGCTGATGGCAGGTTTGTCCGTTTTTCTTGTTC TTTATCCGCAGAAATATTTGCTTTTGCTTACTACCATCGCAACAGACAGT CTCTGACCTCCTCAATCCTATTAACCCTGATTATCGGTTTCTACGTAGAC AGCTCTATATGACGAGGCTTTTTGCCAAAGAGATTAAACTTTCATTATTT TTCACTTTCGATTCTTGTTTCAGTTTCTTCCGAACTGTTGAAATGCCCGA ACTGCAAGTGGATAAACTTGTCGTATATTTAGCTTCCAGTATTGGTAAAG AGGTCAGGTACGTATTCTTAATTTATTGAATTTTGACTTTCTTGGAATAT ATCCAGGAGTTGGTTGTAAAGGGAAGGGAAGGATTTTTAGAATTCTTTGT TTTGTCTCCATAGCATAGATCTCATTACACTTTAATTATTGGAAAATTAG TTTTTGCTACCCACAAAAGGAAATTGACCTCTCATTAAAACCCTTCATGA ACATTCAAAAAACAAATTATGAAAAGCCTTTATTTCTAAATTTTGCCATC TGTTGTAAGGTTATATAATGATCAGGCTTAATCAAATGACCAATCGACGT CAATTTCTGAATGAATTTTCGCGATGCTAAACTGCTTCCTGTTTTGTATA TAATGTTAATTCAATTATTGAAAAAAATGAAAAAATCGATTTTATTAAGA TTAAGCCTCTTTTGGCTTACGTTGTAAGGGGGAGGGCTTTGTGTTATTGC GAAATCCTTAATCCCATGTTCGTTTGAGATTCTGTCGCTGAATCCTACAA CTTCCTGTCTTCCAGAATAAAAAACAATACAACTTTTGAGGGTAGAACCG TTCATTTTCTCTTCAATACTTGAAGTCACATCTTGCAGTATATGATGTAA TAAAAGTTTGAATTCTTTCTCTCCAGGGAAAGATGTGCGGATTCGATTTC GATGGAAAATATACGGGCTGATGCGGAAGCTAAGAATATCCAAGTGGAAT GTATTGATCAACCAAGGTAAATGTCTGACGAACCTCTTTCTTGAGTGTTG AAAGCAAATACCTTTCCTCAATTTAACACCCTCTCTAACCTTAAGTACTT TGAAAGGTGTTCCTTGGTAATTTCATTCCATTACAAATATCATCTCTTGC TTTCTTAAAAAACTTTCATTCGAAAAGACTTCTATCTTTATTCTTTGGCC AGGAAATGTTTAGTAATTAATAAAGAACATTTTCGACATTTTTTCACTTC TTTCCTTCTTCTGACTGCCCATACATCATGTCTTTAATCGCAGATTTCCT TGCCAAGATTTGCAACTTCTCAATCGAAATCTTTAATGTATTTATAGTTT TCAAAGCGACAAAAGAATTTCTATAGCACATAATAACACCGACTTTATTG ATACTGAACTTTGGGAAGTCGGTTTTAACTATCACATTCACTTTCGATGG TTGTCTTACAAGCTTGTGAAAATCCTACTAAGTTTTTGAATATCTGTTAA GATCGCTTCCCACTCTGCTTAAAGCTTTCTTCTACTAAATAATTAAGCAT CGCACGTTGTTCAACTACTAAAAAAGCTGATTGGAAAGCAAACTTTAGTA GTAATTCTCCTAACGCCTAAAATTGAAAGGGACATTAACGTTTAAGTCTA CCTGGAAATGCTATGAAATGATTTCATGAGAAAATCACTGAGGGCCACAT TTAATCGGATTTGCATATCCAAAAATACCCATGCCACTCTCGCATACCTC TCAGATCAACATTTTAAAGCTAACTGCACTCAAATGCCCTTATCCTATCC ACTTTCAGCCTGGTACTCAATGTTTATTGTTTGAAGTACCCAAAAGCCAA AGAATGTGTCAACAAGGATAACTTTCGAAGCGATTCAAACGCCGATAAAG AAGAAGCTAGGTAAGCAGTAAACCTTTTACGGGATTGACTTCTAAGGGCC CTTGCATACATCATCAATTTAGTAATTGAAACCGCTCTCACTCCCAACTT GGACTACCTGCACATATTTGAAGTGTTTTTAAAGTGCCTGACTTGGACTG TTATTCATATTACAACAATTAAAAGAGGAATTTCAAGAGTACTGTTAAAC AAGTTTTGTCCTTGTTTAAACGTGTACCTCTTGACAATTCACGGAATTTA AAAGCAATCATTGATGATATGAAAGAATATATACCTTATTATGGTCCATT ACATGAATCTATCCCATTTTTGATCTCGCTTATCTATATGTCATGCAATT TCATCATCTTATAAACGATTCAACTCAGGACATTGAAATTGGTGACCATC ATTTTATCAATCACTCTCTTCGTTACCTTCCTGGGCTGTGTACTGTTGTT AGCCTTCCATCATCGTAAAACTATTCGCAAAAGAGCATTAAATCAGAAAC ATAATAATAAGACCACAGACAATAACAATTCAAATGAACTTTTATCAAAT GAACCAAATGGAAAAACAATGTGGTTATAGTTTCATGTGGTGTTCATGAC GCTGAGGTTATGCATGTCCTCCTCACAACCTGTGTCTTAACCTTCCCTAA CCTCCATGCACCTTGTAGTTTACACTCGATTGTTCGAACCTACCCTGCCT GCCCTTTTTAGCATGTTCTGTTTGAAAATGATGTGAGATAGCGTTTCAAA GTCCCGTGCTAACTGGGAGAGGAAGAATCCCCTTCGCTATTTCTTTAATT TCAATTTTTGAATCAACTCGCACTGGATTTTTTGAAGTTGAAAGATATTG ATTTCGAAATCTGAAGCTAATGAAAGACTTTCCTTCCGTTTAATCATGCC CTTTATTTCTCAACCCTTTCTGGGTAAAAACATGGTCTATGGGGCATGGG TGTCAACGTAATGACGAGTGCATGAATCGGGCTGTGAAGCCCTCAGTTAA TTGTTAATGCATTCATTTTCATTCATTGTTATGTATAGGAAGTGGATGAT AGTTGGTATTGTGTTTTGCACACTGTTTGTTGTCTTCTCTCTCACTGCAC TCATTGCATGGATCCTCAAACATAAACAATCCAAACATCGAACTGCTGTC CAAATGACCAAAAGTGGTGAAGTCATCGCTAACCCTCAAACCATTAACAA CAATGTCTAATTCCCTACCCCTAACTACTTACTCACACTCATAATATTCA TTTTGGTGTAATTTTTATAATGATTTTGTATGGGAGGGTTTGATTTTTTA CAAGGTTTTTTTATATTTTGATAATAAAATGGTGTTTGGTGTAAGTCTAT CAAATTATATTTTCATCCTTTCGAATTTCGAGTCGTTAGCTAATATCTTC CATTCGTTCACTCAATATCGTGAACATCAGAAATTAGACAAATTTTTGCT TTAAAACATCGAGTTTAATGAAGCCAAAAAGTTGACTCCTGCACTTTTAT TGTTGTTCAAAAAATGATGTCATTGTTGAGCTTATCAACAATCATCAAGC CTGATAGCTTTCAAAAAGAGTCTTTTCCAAATATTGGTAAGGGAGGGAGA GAAAAAACAATCGGGGCTTGGTCAAGGAAGGCATATTGAATTAATTCCTA ATCATTAAACCCTGTGTGCATATTCAAAGTTAATTGAGTACTTATGATCG ACTAACATAAACTTTTTGGGACTAATTTCTCACACAGGTTGTGGAAAACC GTTTGTTTGATTTTGGTAGCCGTGGTGGCTGTTCTAATCGTTTACATCAC GATCAGTCTCGTGCACCGTGCAGTGTGTTACAAACCGGGTGATTACAAAT ATTCACATAGCTGGTCTTTCTCAAAGAAACCCATGCTGCAGGACGATGAG GTAGAAAATAATAACGATATTGAACGTGTGGTGTGAGACCTGCTTTGTCA TAAAAAGGAAAACTGCAACAGTATATTAACCTGAAGTTATGGTTAGTTTT TGGCAGGAGATGACAGGTGGAGGATGGAGGGTTCTACTTCGCGTCACTAA GCCCACCGCTGTATTCACCAGCCGTCAAAAGATATCTAAGAGAACAAGTG CTCTGTATTATATGACGGAACGAACACTTTTACCAAGAGACATTCAAGTT ATGCAATGTTAATTATAATTTGATTCACAATTTTTCTGACAAAAGAAGAA ACTGTGTATAAAGATATTTTAAATATCCGGGATTTCAGTTTATTCAAGCT TCTTTAAAGTATTGTAAAATTAGATGTACGATTTATTAAGGTAGAAATAT TAATGAAGATTTATGCTTGAAATATGTTTATTGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000669XLOC_000669Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001254-exon-sc0000007-1575043694:1308774..1308981TCONS_00001254-exon-sc0000007-1575043694:1308774..1308981Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1575043694:1301744..1301861TCONS_00001254-exon-sc0000007-1575043694:1301744..1301861Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1575043694:1301453..1301535TCONS_00001254-exon-sc0000007-1575043694:1301453..1301535Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1575043694:1301175..1301258TCONS_00001254-exon-sc0000007-1575043694:1301175..1301258Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1575043694:1300466..1300555TCONS_00001254-exon-sc0000007-1575043694:1300466..1300555Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1575043694:1299572..1299673TCONS_00001254-exon-sc0000007-1575043694:1299572..1299673Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1575043694:1297246..1297844TCONS_00001254-exon-sc0000007-1575043694:1297246..1297844Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1510915933:1308774..1308981TCONS_00001254-exon-sc0000007-1510915933:1308774..1308981Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1510915933:1301744..1301861TCONS_00001254-exon-sc0000007-1510915933:1301744..1301861Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1510915933:1301453..1301535TCONS_00001254-exon-sc0000007-1510915933:1301453..1301535Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1510915933:1301175..1301258TCONS_00001254-exon-sc0000007-1510915933:1301175..1301258Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1510915933:1300466..1300555TCONS_00001254-exon-sc0000007-1510915933:1300466..1300555Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1510915933:1299572..1299673TCONS_00001254-exon-sc0000007-1510915933:1299572..1299673Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1510915933:1297246..1297844TCONS_00001254-exon-sc0000007-1510915933:1297246..1297844Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1491911889:1308774..1308981TCONS_00001254-exon-sc0000007-1491911889:1308774..1308981Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1491911889:1301744..1301861TCONS_00001254-exon-sc0000007-1491911889:1301744..1301861Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1491911889:1301453..1301535TCONS_00001254-exon-sc0000007-1491911889:1301453..1301535Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1491911889:1301175..1301258TCONS_00001254-exon-sc0000007-1491911889:1301175..1301258Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1491911889:1300466..1300555TCONS_00001254-exon-sc0000007-1491911889:1300466..1300555Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1491911889:1299572..1299673TCONS_00001254-exon-sc0000007-1491911889:1299572..1299673Clytia hemisphaericaexon
TCONS_00001254-exon-sc0000007-1491911889:1297246..1297844TCONS_00001254-exon-sc0000007-1491911889:1297246..1297844Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1297246..1308981 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.89475 2.52335 0.333788 1.17388 0.446378 0.408305 1.69917 1.2494 1.51869 1.83311 1.41706 2.13338 5.93205 5.71477 3.38902 2.88006 5.86788 4.13167 4.19496 9.24415 14.771 17.0164 5.59965 5.62893 3.44579 4.88062 2.01904 2.40739 2.06155 1.38973
Blast
BLAST of TCONS_00001254 vs. Swiss-Prot (Human)
Match: CD38 (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 OS=Homo sapiens GN=CD38 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 7.368e-22
Identity = 66/221 (29.86%), Postives = 106/221 (47.96%), Query Frame = 3
Query:    9 LWLAFYDSFAFKDPCTVGVDDYKTFFYMLHTSRKIKNALFWSGMHDLVTDFTFINDDYIVIGDTLTGYLLNNLNWCGGTDADGLNSTSCS---KTC--NVMTPAWTLASSEFAKRSTETAKVLLNATRANNKDAYADGSFFRTVEMPELQVDKLVVYLASSI--GKE-VRERCADSISMENIRADAEAKNIQVEC--IDQPSLVLNVYCLKYPKAKECVNK 641
            +W AF  +F  K PC +  +DY+    +   +      L WS + DL   FT +  D   + DTL GYL ++L WCG  +   +N  SC    K C  N ++  W   S  FA+ + +   V+LN +R+     +   S F +VE+  LQ +K+    A  I  G+E  R+ C D  +++ + +    +NIQ  C  I +P   L   C+K P+   C ++
Sbjct:   85 VWDAFKGAFISKHPCNITEEDYQPLMKLGTQTVPCNKILLWSRIKDLAHQFTQVQRDMFTLEDTLLGYLADDLTWCGEFNTSKINYQSCPDWRKDCSNNPVSVFWKTVSRRFAEAACDVVHVMLNGSRSK---IFDKNSTFGSVEVHNLQPEKVQTLEAWVIHGGREDSRDLCQDP-TIKELESIISKRNIQFSCKNIYRPDKFLQ--CVKNPEDSSCTSE 299          
The following BLAST results are available for this feature:
BLAST of TCONS_00001254 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD387.368e-2229.86ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 ... [more]
back to top