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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001167 ID=TCONS_00001167|Name=TCONS_00001167|organism=Clytia hemisphaerica|type=transcript|length=3026bp
CGACTTTCAAACATCTTTTTGTCAGGAAAGAAGAGATCGAAAGATTAGCA
TGCATTTATTACACGTACTTTAAAGTATATACAAAGACAACATGATGGGC
GTTGAGGGCGTCACAAACGAATCGTTCCACCATCAGGGTGAGGACCATCA
ACATCAACACGGAACATCTAAACACGCTGACCTCAAACACCTTCAAGAAC
ATTACGATGAAATCACAGATACAAAACTCCCTGAAAATCTACACCGTGGT
GACATCACAACTGTCAACCGTTTCCTTGGTTACCATGATGCCATGATGGC
TACCTGCGGTACCTTTCTCGTCTTACCATTACGTAATATCAACAACATGG
TCAAAGCAAGTGATTATGACGAGTTAAAAAAGAATCACAAACTGCCCCAT
GACCCTATCGTTGTTGATGATTTAGCTGGTTATCTGGACGCAATGAAAAC
CGAATTCATTATGTTCTTCCTTGGTTTTCTTATTATATGCACGATTTGGG
AGACCAACATCATTCGAACAAACGTCATCAAAAGATACGATGATTTCATG
GTGATANTTGGTTTTCTCATTATTTGCACGATTTGGGAGACCAACATCAT
TCGAACAAACGTCATCAAAAGATACGATGATTTTATGGTCATGCTTGGAC
TCTTCCAGATGGCAGCCATTGTGGTTCTCCCATTCTCCATCGCTTTGAAT
GGTGCATACCCAAGAGAGGATGTGACTGTGCTCCTCACCATAACCATTTT
GATcattatcaacattttcgaacTGATCATGATTTTGTACGGATTCTACT
GTCCAAGGTTGCTCAATATGGCTATGAAAGACTGGAGCAATAAGGAGGTC
CGACGGTTCATGCTGAGAATGTGCATTAAGCCAGTAATGGAGATTCTGCT
GGTTGGAGTGGCAGGGGCTTTCACACTTCTGAATTACCAGATTGCGTGGG
CCATGTTAGCCTTGCTGGTCATTTCTCCGTTGATGCGGAAGTTAGGTTAT
TATTACGAACGCCATCATGTGGGTTACGAGAAGAGAGAAAAATGCCgttt
cttttatttctacaCAAAGGGACAGATCAGTAAAGAGAGAGTGGAAGCTA
TGTCGGATGCAGCGATCGCAATTATAGcctgtgttttgattttggacATC
ACAGTGGAAGACTTCCCTACAAAACATGCTGTCCATGAAGAAGGTCTGAT
CAATGTTTTAAGAGAAATGAAATTCGATTTTGGAGCATTCTTCGGAGCAT
ACTGTGGTGTTTCCATTTTGTGGTACATCAACCACACTGTGCTCAACCTT
TTCCACACTATCGACATTGGTACCTTGTATCTTCAAAAGATCTTCCTagc
tttcctttgttttcttccCATTGTCAATAACATGATGGTAAGATACGGTT
TCGGACAGGAAGGTACGCAAGCGGACCGTCGATTGGCTATTCAATGGTCT
GGTGGAATATCTTTTGCAGCAGGTATCACTCAAACCATGATGGTCGTTTG
GGGATATTTCCGTAAAGAGAAGCTCCTTCACCGTTGGGCCACGTGCAACA
AAAGTGAAATGAATCGCAAGCAACTTTTGTATGTCCGAAGCAAAATTTGC
GCTGTTCCCATTTGGGCGCTTCTTTGTATTTTCTCATCCTTGGCACCAGG
GTCGACGTCAGTCTATCTGCTCCTGGCGTGTGCCGTGGGTAACCTTCTTA
CCATGTTGATCCTGAAGTTCATGTTTATGAACCACATCAATGAGCCAGGT
ATCTCCATCTTCGATCATTCCAATCACGGATCCATACTTTCCAACGGTAG
TGGTTGCGAAATGCGTAAACAGATGAAGCAAGAGATCGCTGATGGTTTCT
ACGATTCAAGAGACCATTCTGCGGGCGAATGTGACCTTCGAAAGGGTATG
GCGGAAGAGATAGCGGATGGGAAAGTTTACCAGGATGAAAATGAGATGGA
GAGAGAAGTTCTGGAAGAGGcggaaaagaaagaaatttaagACGAACAAA
AGGAAGAACGGCAGGAAAATGACATGGCTCAAAACCACCTTCAAGGTGAC
AAGCAAGACACTATCTGTTGACGATTGATCATTGACTGATTCGAGTTTAT
TTGATAATTGATTTTAGGTTATTTCAACAGTAAATATATAACTAAGTAGT
ATTGCATATATTTTTAAGGTTACATTGTTAAGTTATCTTTTCGTAAGTTT
AATTCTTGGATTTTTTACACTCACTATGTCTAACTGAAATTGTACTACTT
TCGTCTCAATTTACACCTCGTCAAATATTTTGGTTTACTTTTCACTTCAA
TCGGAGTCAGTACTTTGTTTACTCACTCCTTTTTCATTTGGATTAGAATT
ACCAAATATTTAAACATTTGTAAAATAAAGATACTGTATAACATATGATT
ATATAATAATAGCATGGCTAAGAATTGGTTTTATTAGAAAGAAACAAATT
TTGCTACGATTCTGTACTTAAAGGGCTCGCCACCTACTTGCCTACTTAAT
TGTAAGTTCAAATAAAAGTGGTATTTACATTTCAGAGGGCGTGCCAAAAA
ATAATGATCGGtgcaaattcaaaatgaagtgAACTGTGCCTAAccttcga
gcatcttcctatttattttactTGAGAAGCATCTTGGGGGAGGGGGGGGC
TTAAAATCTAAAGATTGAAAAGTAttatgaccttgaaatttctaCCAGTG
GTAGGTATGGATGATTGGAGATAATTAGCGTTTGGCCACCTGCCTGATTA
GTACTTCACAGATCAGAATAtaaatttggctaaaatcaCATATTCGCCGA
TTGACTCGTTCGATTTGATTAAAATTTGCTGCTGAAAGCTGGTTTGTCAA
ATAATGCAATCCCTGGATAAAGTAACCAACCCAGTCCTATTGtcggcatt
ttcaaaaaatagcgATGTCATCAGGTAGCGATGAAGGTATCAATAATGCC
AAAAATGTAACCAAGGATGCCAATTCATATAtagaatttcaagtcaattg
gggaatattttcaaagttctcaaatt Run BLAST on NCBI protein sequence of TCONS_00001167-protein >TCONS_00001167-protein ID=TCONS_00001167-protein|Name=TCONS_00001167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=632bp
MMGVEGVTNESFHHQGEDHQHQHGTSKHADLKHLQEHYDEITDTKLPENL
HRGDITTVNRFLGYHDAMMATCGTFLVLPLRNINNMVKASDYDELKKNHK
LPHDPIVVDDLAGYLDAMKTEFIMFFLGFLIICTIWETNIIRTNVIKRYD
DFMVIXGFLIICTIWETNIIRTNVIKRYDDFMVMLGLFQMAAIVVLPFSI
ALNGAYPREDVTVLLTITILIIINIFELIMILYGFYCPRLLNMAMKDWSN
KEVRRFMLRMCIKPVMEILLVGVAGAFTLLNYQIAWAMLALLVISPLMRK
LGYYYERHHVGYEKREKCRFFYFYTKGQISKERVEAMSDAAIAIIACVLI
LDITVEDFPTKHAVHEEGLINVLREMKFDFGAFFGAYCGVSILWYINHTV
LNLFHTIDIGTLYLQKIFLAFLCFLPIVNNMMVRYGFGQEGTQADRRLAI
QWSGGISFAAGITQTMMVVWGYFRKEKLLHRWATCNKSEMNRKQLLYVRS
KICAVPIWALLCIFSSLAPGSTSVYLLLACAVGNLLTMLILKFMFMNHIN
EPGISIFDHSNHGSILSNGSGCEMRKQMKQEIADGFYDSRDHSAGECDLR
KGMAEEIADGKVYQDENEMEREVLEEAEKKEI Run BLAST on NCBI transcript from alignment at sc0000007:650377..653654- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001167 ID=TCONS_00001167|Name=TCONS_00001167|organism=Clytia hemisphaerica|type=transcript|length=3278bp|location=Sequence derived from alignment at sc0000007:650377..653654- (Clytia hemisphaerica)
CGACTTTCAAACATCTTTTTGTCAGGAAAGAAGAGATCGAAAGATTAGCA
TGCATTTATTACACGTACTTTAAAGTATATACAAAGACAACATGGTATAG
ATTTCAGTCTTATTCAAATAGTTTAGAATAGTCCCTTATTTCTGACTCCC
GACTTCCCTCTCAGTCACATTATATACAACTTATTCAGACATCATTTCTG
CTCCAAGAGGACTCAACCCAAATATTCTCTTTTTGTAGATGGGCGTTGAG
GGCGTCACAAACGAATCGTTCCACCATCAGGGTGAGGACCATCAACATCA
ACACGGAACATCTAAACACGCTGACCTCAAACACCTTCAAGAACATTACG
ATGAAATCACAGATACAAAACTCCCTGAAAATCTACACCGTGGTGACATC
ACAACTGTCAACCGTTTCCTTGGTTACCATGATGCCATGATGGCTACCTG
CGGTACCTTTCTCGTCTTACCATTACGTAATATCAACAACATGGTCAAAG
CAAGTGATTATGACGAGTTAAAAAAGAATCACAAACTGCCCCATGACCCT
ATCGTTGTTGATGATTTAGCTGGTTATCTGGACGCAATGAAAACCGAATT
CATTATGTTCTTCCTTGGTTTTCTTATTATATGCACGATTTGGGAGACCA
ACATCATTCGAACAAACGTCATCAAAAGATACGATGATTTCATGGTGATA
NTTGGTTTTCTCATTATTTGCACGATTTGGGAGACCAACATCATTCGAAC
AAACGTCATCAAAAGATACGATGATTTTATGGTCATGCTTGGACTCTTCC
AGATGGCAGCCATTGTGGTTCTCCCATTCTCCATCGCTTTGAATGGTGCA
TACCCAAGAGAGGATGTGACTGTGCTCCTCACCATAACCATTTTGATCAT
TATCAACATTTTCGAACTGATCATGATTTTGTACGGATTCTACTGTCCAA
GGTTGCTCAATATGGCTATGAAAGACTGGAGCAATAAGGAGGTCCGACGG
TTCATGCTGAGAATGTGCATTAAGCCAGTAATGGAGATTCTANGATTCTA
CTGTCCAAGGTTGCTCAATATGGCCATGAAAGACTGGAGCAATAAGGAGG
TCCGACGGTTCATGCTGAGAATGTGCATTAAGCCAGTAATGGAGATTCTG
CTGGTTGGAGTGGCAGGGGCTTTCACACTTCTGAATTACCAGATTGCGTG
GGCCATGTTAGCCTTGCTGGTCATTTCTCCGTTGATGCGGAAGTTAGGTT
ATTATTACGAACGCCATCATGTGGGTTACGAGAAGAGAGAAAAATGCCGT
TTCTTTTATTTCTACACAAAGGGACAGATCAGTAAAGAGAGAGTGGAAGC
TATGTCGGATGCAGCGATCGCAATTATAGCCTGTGTTTTGATTTTGGACA
TCACAGTGGAAGACTTCCCTACAAAACATGCTGTCCATGAAGAAGGTCTG
ATCAATGTTTTAAGAGAAATGAAATTCGATTTTGGAGCATTCTTCGGAGC
ATACTGTGGTGTTTCCATTTTGTGGTACATCAACCACACTGTGCTCAACC
TTTTCCACACTATCGACATTGGTACCTTGTATCTTCAAAAGATCTTCCTA
GCTTTCCTTTGTTTTCTTCCCATTGTCAATAACATGATGGTAAGATACGG
TTTCGGACAGGAAGGTACGCAAGCGGACCGTCGATTGGCTATTCAATGGT
CTGGTGGAATATCTTTTGCAGCAGGTATCACTCAAACCATGATGGTCGTT
TGGGGATATTTCCGTAAAGAGAAGCTCCTTCACCGTTGGGCCACGTGCAA
CAAAAGTGAAATGAATCGCAAGCAACTTTTGTATGTCCGAAGCAAAATTT
GCGCTGTTCCCATTTGGGCGCTTCTTTGTATTTTCTCATCCTTGGCACCA
GGGTCGACGTCAGTCTATCTGCTCCTGGCGTGTGCCGTGGGTAACCTTCT
TACCATGTTGATCCTGAAGTTCATGTTTATGAACCACATCAATGAGCCAG
GTATCTCCATCTTCGATCATTCCAATCACGGATCCATACTTTCCAACGGT
AGTGGTTGCGAAATGCGTAAACAGATGAAGCAAGAGATCGCTGATGGTTT
CTACGATTCAAGAGACCATTCTGCGGGCGAATGTGACCTTCGAAAGGGTA
TGGCGGAAGAGATAGCGGATGGGAAAGTTTACCAGGATGAAAATGAGATG
GAGAGAGAAGTTCTGGAAGAGGCGGAAAAGAAAGAAATTTAAGACGAACA
AAAGGAAGAACGGCAGGAAAATGACATGGCTCAAAACCACCTTCAAGGTG
ACAAGCAAGACACTATCTGTTGACGATTGATCATTGACTGATTCGAGTTT
ATTTGATAATTGATTTTAGGTTATTTCAACAGTAAATATATAACTAAGTA
GTATTGCATATATTTTTAAGGTTACATTGTTAAGTTATCTTTTCGTAAGT
TTAATTCTTGGATTTTTTACACTCACTATGTCTAACTGAAATTGTACTAC
TTTCGTCTCAATTTACACCTCGTCAAATATTTTGGTTTACTTTTCACTTC
AATCGGAGTCAGTACTTTGTTTACTCACTCCTTTTTCATTTGGATTAGAA
TTACCAAATATTTAAACATTTGTAAAATAAAGATACTGTATAACATATGA
TTATATAATAATAGCATGGCTAAGAATTGGTTTTATTAGAAAGAAACAAA
TTTTGCTACGATTCTGTACTTAAAGGGCTCGCCACCTACTTGCCTACTTA
ATTGTAAGTTCAAATAAAAGTGGTATTTACATTTCAGAGGGCGTGCCAAA
AAATAATGATCGGTGCAAATTCAAAATGAAGTGAACTGTGCCTAACCTTC
GAGCATCTTCCTATTTATTTTACTTGAGAAGCATCTTGGGGGAGGGGGGG
GCTTAAAATCTAAAGATTGAAAAGTATTATGACCTTGAAATTTCTACCAG
TGGTAGGTATGGATGATTGGAGATAATTAGCGTTTGGCCACCTGCCTGAT
TAGTACTTCACAGATCAGAATATAAATTTGGCTAAAATCACATATTCGCC
GATTGACTCGTTCGATTTGATTAAAATTTGCTGCTGAAAGCTGGTTTGTC
AAATAATGCAATCCCTGGATAAAGTAACCAACCCAGTCCTATTGTCGGCA
TTTTCAAAAAATAGCGATGTCATCAGGTAGCGATGAAGGTATCAATAATG
CCAAAAATGTAACCAAGGATGCCAATTCATATATAGAATTTCAAGTCAAT
TGGGGAATATTTTCAAAGTTCTCAAATT Coding sequence (CDS) from alignment at sc0000007:650377..653654- >TCONS_00001167 ID=TCONS_00001167|Name=TCONS_00001167|organism=Clytia hemisphaerica|type=CDS|length=5697bp|location=Sequence derived from alignment at sc0000007:650377..653654- (Clytia hemisphaerica)
GTCCGACGGTTCATGCTGAGAATGTGCATTAAGCCAGTAATGGAGATTCT
GCTGGTTGGAGTGGCAGGGGCTTTCACACTTCTGAATTACCAGATTGCGT
GGGCCATGTTAGCCTTGCTGGTCATTTCTCCGTTGATGCGGAAGTTAGGT
TATTATTACGAACGCCATCATGTGGGTTACGAGAAGAGAGAAAAATGCCG
TTTCTTTTATTTCTACACAAAGGGACAGATCAGTAAAGAGAGAGTGGAAG
CTATGTCGGATGCAGCGATCGCAATTATAGCCTGTGTTTTGATTTTGGAC
ATCACAGTGGAAGACTTCCCTACAAAACATGCTGTCCATGAAGAAGGTCT
GATCAATGTTTTAAGAGAAATGAAATTCGATTTTGGAGCATTCTTCGGAG
CATACTGTGGTGTTTCCATTTTGTGGTACATCAACCACACTGTGCTCAAC
CTTTTCCACACTATCGACATTGGTACCTTGTATCTTCAAAAGATCTTCCT
AGCTTTCCTTTGTTTTCTTCCCATTGTCAATAACATGATGGTAAGATACG
GTTTCGGACAGGAAGGTACGCAAGCGGACCGTCGATTGGCTATTCAATGG
TCTGGTGGAATATCTTTTGCAGCAGGTATCACTCAAACCATGATGGTCGT
TTGGGGATATTTCCGTAAAGAGAAGCTCCTTCACCGTTGGGCCACGTGCA
ACAAAAGTGAAATGAATCGCAAGCAACTTTTGTATGTCCGAAGCAAAATT
TGCGCTGTTCCCATTTGGGCGCTTCTTTGTATTTTCTCATCCTTGGCACC
AGGGTCGACGTCAGTCTATCTGCTCCTGGCGTGTGCCGTGGGTAACCTTC
TTACCATGTTGATCCTGAAGTTCATGTTTATGAACCACATCAATGAGCCA
GGTATCTCCATCTTCGATCATTCCAATCACGGATCCATACTTTCCAACGG
TAGTGGTTGCGAAATGCGTAAACAGATGAAGCAAGAGATCGCTGATGGTT
TCTACGATTCAAGAGACCATTCTGCGGGCGAATGTGACCTTCGAAAGGGT
ATGGCGGAAGAGATAGCGGATGGGAAAGTTTACCAGGATGAAAATGAGAT
GGAGAGAGAAGTTCTGGAAGAGGCGGAAAAGAAAGAAATTTAAATGGGCG
TTGAGGGCGTCACAAACGAATCGTTCCACCATCAGGGTGAGGACCATCAA
CATCAACACGGAACATCTAAACACGCTGACCTCAAACACCTTCAAGAACA
TTACGATGAAATCACAGATACAAAACTCCCTGAAAATCTACACCGTGGTG
ACATCACAACTGTCAACCGTTTCCTTGGTTACCATGATGCCATGATGGCT
ACCTGCGGTACCTTTCTCGTCTTACCATTACGTAATATCAACAACATGGT
CAAAGCAAGTGATTATGACGAGTTAAAAAAGAATCACAAACTGCCCCATG
ACCCTATCGTTGTTGATGATTTAGCTGGTTATCTGGACGCAATGAAAACC
GAATTCATTATGTTCTTCCTTGGTTTTCTTATTATATGCACGATTTGGGA
GACCAACATCATTCGAACAAACGTCATCAAAAGATACGATGATTTCATGG
TGATANTTGGTTTTCTCATTATTTGCACGATTTGGGAGACCAACATCATT
CGAACAAACGTCATCAAAAGATACGATGATTTTATGGTCATGCTTGGACT
CTTCCAGATGGCAGCCATTGTGGTTCTCCCATTCTCCATCGCTTTGAATG
GTGCATACCCAAGAGAGGATGTGACTGTGCTCCTCACCATAACCATTTTG
ATCATTATCAACATTTTCGAACTGATCATGATTTTGTACGGATTCTACTG
TCCAAGGTTGCTCAATATGGCTATGAAAGACTGGAGCAATAAGGAGATGG
TCCGACGGTTCATGCTGAGAATGTGCATTAAGCCAGTAATGGAGATTCTG
CTGGTTGGAGTGGCAGGGGCTTTCACACTTCTGAATTACCAGATTGCGTG
GGCCATGTTAGCCTTGCTGGTCATTTCTCCGTTGATGCGGAAGTTAGGTT
ATTATTACGAACGCCATCATGTGGGTTACGAGAAGAGAGAAAAATGCCGT
TTCTTTTATTTCTACACAAAGGGACAGATCAGTAAAGAGAGAGTGGAAGC
TATGTCGGATGCAGCGATCGCAATTATAGCCTGTGTTTTGATTTTGGACA
TCACAGTGGAAGACTTCCCTACAAAACATGCTGTCCATGAAGAAGGTCTG
ATCAATGTTTTAAGAGAAATGAAATTCGATTTTGGAGCATTCTTCGGAGC
ATACTGTGGTGTTTCCATTTTGTGGTACATCAACCACACTGTGCTCAACC
TTTTCCACACTATCGACATTGGTACCTTGTATCTTCAAAAGATCTTCCTA
GCTTTCCTTTGTTTTCTTCCCATTGTCAATAACATGATGGTAAGATACGG
TTTCGGACAGGAAGGTACGCAAGCGGACCGTCGATTGGCTATTCAATGGT
CTGGTGGAATATCTTTTGCAGCAGGTATCACTCAAACCATGATGGTCGTT
TGGGGATATTTCCGTAAAGAGAAGCTCCTTCACCGTTGGGCCACGTGCAA
CAAAAGTGAAATGAATCGCAAGCAACTTTTGTATGTCCGAAGCAAAATTT
GCGCTGTTCCCATTTGGGCGCTTCTTTGTATTTTCTCATCCTTGGCACCA
GGGTCGACGTCAGTCTATCTGCTCCTGGCGTGTGCCGTGGGTAACCTTCT
TACCATGTTGATCCTGAAGTTCATGTTTATGAACCACATCAATGAGCCAG
GTATCTCCATCTTCGATCATTCCAATCACGGATCCATACTTTCCAACGGT
AGTGGTTGCGAAATGCGTAAACAGATGAAGCAAGAGATCGCTGATGGTTT
CTACGATTCAAGAGACCATTCTGCGGGCGAATGTGACCTTCGAAAGGGTA
TGGCGGAAGAGATAGCGGATGGGAAAGTTTACCAGGATGAAAATGAGATG
GAGAGAGAAGTTCTGGAAGAGGCGGAAAAGAAAGAAATTTAAATGGGCGT
TGAGGGCGTCACAAACGAATCGTTCCACCATCAGGGTGAGGACCATCAAC
ATCAACACGGAACATCTAAACACGCTGACCTCAAACACCTTCAAGAACAT
TACGATGAAATCACAGATACAAAACTCCCTGAAAATCTACACCGTGGTGA
CATCACAACTGTCAACCGTTTCCTTGGTTACCATGATGCCATGATGGCTA
CCTGCGGTACCTTTCTCGTCTTACCATTACGTAATATCAACAACATGGTC
AAAGCAAGTGATTATGACGAGTTAAAAAAGAATCACAAACTGCCCCATGA
CCCTATCGTTGTTGATGATTTAGCTGGTTATCTGGACGCAATGAAAACCG
AATTCATTATGTTCTTCCTTGGTTTTCTTATTATATGCACGATTTGGGAG
ACCAACATCATTCGAACAAACGTCATCAAAAGATACGATGATTTCATGGT
GATANTTGGTTTTCTCATTATTTGCACGATTTGGGAGACCAACATCATTC
GAACAAACGTCATCAAAAGATACGATGATTTTATGGTCATGCTTGGACTC
TTCCAGATGGCAGCCATTGTGGTTCTCCCATTCTCCATCGCTTTGAATGG
TGCATACCCAAGAGAGGATGTGACTGTGCTCCTCACCATAACCATTTTGA
TCATTATCAACATTTTCGAACTGATCATGATTTTGTACGGATTCTACTGT
CCAAGGTTGCTCAATATGGCTATGAAAGACTGGAGCAATAAGGAGATGGT
CCGACGGTTCATGCTGAGAATGTGCATTAAGCCAGTAATGGAGATTCTGC
TGGTTGGAGTGGCAGGGGCTTTCACACTTCTGAATTACCAGATTGCGTGG
GCCATGTTAGCCTTGCTGGTCATTTCTCCGTTGATGCGGAAGTTAGGTTA
TTATTACGAACGCCATCATGTGGGTTACGAGAAGAGAGAAAAATGCCGTT
TCTTTTATTTCTACACAAAGGGACAGATCAGTAAAGAGAGAGTGGAAGCT
ATGTCGGATGCAGCGATCGCAATTATAGCCTGTGTTTTGATTTTGGACAT
CACAGTGGAAGACTTCCCTACAAAACATGCTGTCCATGAAGAAGGTCTGA
TCAATGTTTTAAGAGAAATGAAATTCGATTTTGGAGCATTCTTCGGAGCA
TACTGTGGTGTTTCCATTTTGTGGTACATCAACCACACTGTGCTCAACCT
TTTCCACACTATCGACATTGGTACCTTGTATCTTCAAAAGATCTTCCTAG
CTTTCCTTTGTTTTCTTCCCATTGTCAATAACATGATGGTAAGATACGGT
TTCGGACAGGAAGGTACGCAAGCGGACCGTCGATTGGCTATTCAATGGTC
TGGTGGAATATCTTTTGCAGCAGGTATCACTCAAACCATGATGGTCGTTT
GGGGATATTTCCGTAAAGAGAAGCTCCTTCACCGTTGGGCCACGTGCAAC
AAAAGTGAAATGAATCGCAAGCAACTTTTGTATGTCCGAAGCAAAATTTG
CGCTGTTCCCATTTGGGCGCTTCTTTGTATTTTCTCATCCTTGGCACCAG
GGTCGACGTCAGTCTATCTGCTCCTGGCGTGTGCCGTGGGTAACCTTCTT
ACCATGTTGATCCTGAAGTTCATGTTTATGAACCACATCAATGAGCCAGG
TATCTCCATCTTCGATCATTCCAATCACGGATCCATACTTTCCAACGGTA
GTGGTTGCGAAATGCGTAAACAGATGAAGCAAGAGATCGCTGATGGTTTC
TACGATTCAAGAGACCATTCTGCGGGCGAATGTGACCTTCGAAAGGGTAT
GGCGGAAGAGATAGCGGATGGGAAAGTTTACCAGGATGAAAATGAGATGG
AGAGAGAAGTTCTGGAAGAGGCGGAAAAGAAAGAAATTTAAATGGGCGTT
GAGGGCGTCACAAACGAATCGTTCCACCATCAGGGTGAGGACCATCAACA
TCAACACGGAACATCTAAACACGCTGACCTCAAACACCTTCAAGAACATT
ACGATGAAATCACAGATACAAAACTCCCTGAAAATCTACACCGTGGTGAC
ATCACAACTGTCAACCGTTTCCTTGGTTACCATGATGCCATGATGGCTAC
CTGCGGTACCTTTCTCGTCTTACCATTACGTAATATCAACAACATGGTCA
AAGCAAGTGATTATGACGAGTTAAAAAAGAATCACAAACTGCCCCATGAC
CCTATCGTTGTTGATGATTTAGCTGGTTATCTGGACGCAATGAAAACCGA
ATTCATTATGTTCTTCCTTGGTTTTCTTATTATATGCACGATTTGGGAGA
CCAACATCATTCGAACAAACGTCATCAAAAGATACGATGATTTCATGGTG
ATANTTGGTTTTCTCATTATTTGCACGATTTGGGAGACCAACATCATTCG
AACAAACGTCATCAAAAGATACGATGATTTTATGGTCATGCTTGGACTCT
TCCAGATGGCAGCCATTGTGGTTCTCCCATTCTCCATCGCTTTGAATGGT
GCATACCCAAGAGAGGATGTGACTGTGCTCCTCACCATAACCATTTTGAT
CATTATCAACATTTTCGAACTGATCATGATTTTGTACGGATTCTACTGTC
CAAGGTTGCTCAATATGGCTATGAAAGACTGGAGCAATAAGGAGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001167-exon-sc0000007-1575043694:653561..653654 | TCONS_00001167-exon-sc0000007-1575043694:653561..653654 | Clytia hemisphaerica | exon |
| TCONS_00001167-exon-sc0000007-1575043694:652664..653416 | TCONS_00001167-exon-sc0000007-1575043694:652664..653416 | Clytia hemisphaerica | exon |
| TCONS_00001167-exon-sc0000007-1575043694:650377..652555 | TCONS_00001167-exon-sc0000007-1575043694:650377..652555 | Clytia hemisphaerica | exon |
| TCONS_00001167-exon-sc0000007-1510915933:653561..653654 | TCONS_00001167-exon-sc0000007-1510915933:653561..653654 | Clytia hemisphaerica | exon |
| TCONS_00001167-exon-sc0000007-1510915933:652664..653416 | TCONS_00001167-exon-sc0000007-1510915933:652664..653416 | Clytia hemisphaerica | exon |
| TCONS_00001167-exon-sc0000007-1510915933:650377..652555 | TCONS_00001167-exon-sc0000007-1510915933:650377..652555 | Clytia hemisphaerica | exon |
| TCONS_00001167-exon-sc0000007-1491911889:653561..653654 | TCONS_00001167-exon-sc0000007-1491911889:653561..653654 | Clytia hemisphaerica | exon |
| TCONS_00001167-exon-sc0000007-1491911889:652664..653416 | TCONS_00001167-exon-sc0000007-1491911889:652664..653416 | Clytia hemisphaerica | exon |
| TCONS_00001167-exon-sc0000007-1491911889:650377..652555 | TCONS_00001167-exon-sc0000007-1491911889:650377..652555 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:650377..653654 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR010617 | TMEM175 |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005267 | potassium channel activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005267 |
potassium channel activity |
Blast
BLAST of TCONS_00001167 vs. Swiss-Prot (Human)
Match: TM175 (Endosomal/lysomomal potassium channel TMEM175 OS=Homo sapiens GN=TMEM175 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.890e-16 Identity = 87/341 (25.51%), Postives = 154/341 (45.16%), Query Frame = 2
Query: 563 FLIICTIWETNIIRTNVIKRYDDFMVMLGLFQMAAIVVLPFSIALNGAYPREDVXXXXXXXXXXXXXXXXXXXXXYGFYCPRLLNMAMKDWSNKEVRRFMLRMCIKPVMEILLVG-----VAGAFTLLNYQIAWAMLALLVISPLMRKLGYYYERHHVGYEKRE--KCRFFYFYTKGQISKERVEAMSDXXXXXXXCVLILDITVEDFPTKHAVHEE---GLINVLREMKFDFGAFFGAYCGVSILWYINHTVLNLFHTIDIGTLYLQKIFLAFLCFLPIVNNMMVRYGFGQEGTQADRRLAIQWSGGISFAAGITQTMMVVWGYFRKEKLLHRWATCNKS 1555
FLI+ W + V+ + DD + +L L M I LP++ +L +P + + L +I I + + +++ Y F+ P LL+ ++ +++ + R + V+ I+L G A F+L +++ ++ +++ P + K+ + +G+ + F F +SKERVEA SD AI+A +LILDI ++ P V E L+ L F A+FG++ V +LW+ +H++ L + LAF+ LP+ + Q + +R ++ S I F A I Q M W LLH+ T S
Sbjct: 85 FLIVTVAWAAHTRLFQVVGKTDDTLALLNLACMMTITFLPYTFSLMVTFPDVPLGIFLFCVCVIAIGVVQALIVGYAFHFPHLLSPQIQRSAHRALYR-------RHVLGIVLQGPALCFAAAIFSLFFVPLSYLLMVTVILLPYVSKVTGWCRDRLLGHREPSAHPVEVFSFDLHEPLSKERVEAFSDGVYAIVATLLILDICEDNVPDPKDVKERFSGSLVAALSATGPRFLAYFGSFATVGLLWFAHHSLFLHVRKATRAMGLLNTLSLAFVGGLPLAYQQTSAFA-RQPRDELER---VRVSCTIIFLASIFQLAM--W----TTALLHQAETLQPS 408
The following BLAST results are available for this feature:
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