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TCONS_00001055 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001055
Unique NameTCONS_00001055
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2029

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001055 ID=TCONS_00001055|Name=TCONS_00001055|organism=Clytia hemisphaerica|type=transcript|length=2029bp
gtccggtgcgtccagtgtttcttaattttttgtttaataaatgtccggcg
tccaaaattccctgtatgcaacaccggactgacaccagaATTCATCCAGA
ATTAtcaacaaaacaaccaaaacttCCAAATCAGTACCTGGATCTTTTGA
AATTGCTTCAGTAATGGAACAGGTACAAAGATGATGAGACATTTCTTTTT
GTCCCCAACGTCCAATTCTTTGGCACCAGTAATATATAACTCTCGGAGTT
GTGTTTTGAGGTCAGAATTGACCTCCAAGTCAAGAAGAGCTTCTCCAATG
GATTTCTCTAACTCATCTGGTGTACCATTGTTTGGTTTCACGACTTTGCC
GAACATGACTGGGTCTAAAACGAGCGAAATAGCGGGACTTTAGTAAATTT
TACCAACAAATTACTCTGTCGTATTCTAGCAAAATGAGTAAAACACTGAT
GGCATCTTCTTTTAATCTTTGAAAATCTGGTAATTCAATATTTTAGGAAA
GTTAGTTGAACCATTGATTTGCGAAATACGGCCAAGAATAAGTGATAAAT
GGCTTCCAAAAAGTTGTACCTTGGCAATAAGCCTTCCACTTAGTATCGAC
TTTAAAAAGACATTTTGAATGTCCTTGTAGAAAGTTGAGCGAGTCTGGTT
TGTCTCGATTACAGCTTTTTAGGTAGGTTCGAAAGTTTGGCAAAGCGAga
caaaaacaataataaatatGGCTACCATGCTCCTCACGCGTGTCTATATc
gtatcaaaaaaaattatttttcaattctcTTATGAATCGAACCTTCTTCA
ATAAGATTTTCGACCTTCTTTGTTCTTCCTTTATGGCTCGTAGTAAAGGA
GGTGGATTTTATGCTGTTAAGCGTGGCAGGAATATTGGAATTTACATGAC
ATGGGCAGAATGTGAAAGTCAAGTAAAGGGTTTTCATGGCGCAAGGTACA
AAAAGTTTGGCTCAGAACAAGAAGCACAAAGTTTCATAGATGAGGTTTCA
TCCAGCAATTCTTCACTTGGTGTTAGAAGAACACAGACTTTTAAAGCAAA
GTCACAAAACACTGcctTTCCAGGATCTGTTACAGCTCTATCTAAAAGAA
CCAAATTGATAGAAGCTAGAAGTTTGTCAACACAAGCCTCGTCCAGCTCC
ACATCCTCCAAGCCCGTTGTTTATACAGATGGTTGCTGCCGTGGTAACGG
TAGAAGTGGAGCCATCGGTGGAATCGGTGTTTATTGGGGACCAGATCATC
CTAGgaatATAAGTGAACCGTTACTAGTAGACGAGCCAACTAACCAGAAA
GCTGAACTGGAGGCCGCCATCAGAGCGATTGATTGTGCGATAGGAATGGG
TCTGGATGATCTTGAATTACGAACAGATAGTACATACACCATCAAATCAA
TGACGGAATGGATTCCACGTTGGGAGCGGAACGGATGGAAAACTTCCAAA
GGAACTGATGTTCTGAACAAAGAACAAATGATCCGGTTGAACGATTTATG
TAAACGGATTGATATAAAATGGACGCACGTTCGCGGACACAAAGGTATCC
ATGGCAACGAAGAAGCAGATCGATTGGCCAATGAAGGAGCAATGAAAACT
TGAAAACGAAGCGTGGTTGTAAAACGGCGACTAACGAACGTGGGATTTTC
CTTAGTGTCACTCATGGTGTAATGTTGGAAATTCTGTCaaattccaaata
aataaatgaagaaGGACTCGCCTACTTTCAGTTATGTTACCTGACAGCTT
CAAATGACAATGTTAAAGacaatttaaacagtattactTGTAAAAGGACA
TTACAGTGTGCCCGAAAGAAAATGGGACGGATTTTATAAATTTAGTatct
ttatttatttaaattttgttcGACTTACCTACCTAGAAACACTGTAGTTT
TTGTTAATGTTTACCATTTGCAATACGGTGTTTTGTCCTCGTTGTGGACA
ATTGTATATCATCCACAAATGCTCTGCtgagaaagaaaaacttttaaata
acaATAATATAGGAACTTTAGCATCATCG
Run BLAST on NCBI

protein sequence of TCONS_00001055-protein

>TCONS_00001055-protein ID=TCONS_00001055-protein|Name=TCONS_00001055-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
MNRTFFNKIFDLLCSSFMARSKGGGFYAVKRGRNIGIYMTWAECESQVKG
FHGARYKKFGSEQEAQSFIDEVSSSNSSLGVRRTQTFKAKSQNTAFPGSV
TALSKRTKLIEARSLSTQASSSSTSSKPVVYTDGCCRGNGRSGAIGGIGV
YWGPDHPRNISEPLLVDEPTNQKAELEAAIRAIDCAIGMGLDDLELRTDS
TYTIKSMTEWIPRWERNGWKTSKGTDVLNKEQMIRLNDLCKRIDIKWTHV
RGHKGIHGNEEADRLANEGAMKT
Run BLAST on NCBI

transcript from alignment at sc0000007:1106025..1116755+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001055 ID=TCONS_00001055|Name=TCONS_00001055|organism=Clytia hemisphaerica|type=transcript|length=10731bp|location=Sequence derived from alignment at sc0000007:1106025..1116755+ (Clytia hemisphaerica)
gtccggtgcgtccagtgtttcttaattttttgtttaataaatgtccggcg tccaaaattccctgtatgcaacaccggactgacaccagaATTCATCCAGA ATTAtcaacaaaacaaccaaaacttCCAAATCAGTACCTGGATCTTTTGA AATTGCTTCAGTAATGGAACAGGTACAAAGATGATGAGACATTTCTTTTT GTCCCCAACGTCCAATTCTTTGGCACCAGTAATATATAACTCTCGGAGTT GTGTTTTGAGGTCAGAATTGACCTCCAAGTCAAGAAGAGCTTCTCCAATG GATTTCTCTAACTCATCTGGTGTACCATTGTTTGGTTTCACGACTTTGCC GAACATGACTGGGTCTAAAACGAGCGAAATAGCGGGACTTTAGTAAATTT TACCAACAAATTACTCTGTCGTATTCTAGCAAAATGAGTAAAACACTGAT GGCATCTTCTTTTAATCTTTGAAAATCTGGTAATTCAATATTTTAGGAAA GTTAGTTGAACCATTGATTTGCGAAATACGGCCAAGAATAAGTGATAAAT GGCTTCCAAAAAGTTGTACCTTGGCAATAAGCCTTCCACTTAGTATCGAC TTTAAAAAGACATTTTGAATGTCCTTGTAGAAAGTTGAGCGAGTCTGGTT TGTCTCGATTACAGCTTTTTAGGTAGGTTCGAAAGTTTGGCAAAGCGAga caaaaacaataataaatatGGCTACCATGCTCCTCACGCGTGTCTATATc gtatcaaaaaaaattatttttcaattctcTTATGAATCGAACCTTCTTCA ATAAGATTTTCGACCTTCTTTGTTCTTCCTTTATGGCTCGTAGTAAAGGA GGTGGATTTTATGCTGTTAAGCGTGGCAGGAATATTGGAATTTACATGAC ATGGTAAGGAATTTTCTATTGGTTATCCTACTACAGTCTTAGATTAAGAA GGAGGTAGGCTACGtccatatcttccttcgttttttcaaaaactcctact ctttgagagtaaggcctaaaagcctggagctgtctattgtgtagaatAAG AAGGAGGGAGATCAGAGATAAATAAGTGTTTGGttaataccgtgagatcg ggtaacttgcatcagtggaggaggctaacatgcatagggccattccagaa tttgtctatAACAGAGGGCGGCgaacgacacaggatttccgagggcaaaa gttttcaccaaaattcaaaatttctaaggcgagagaagaaaatgtatgaa tttcctaggcaattgaattagaaaaggcaaaaaagagtggaatttccgat gcattttgcaaaagtatatggatttttatcggaatttctgaccaccactg gaaaagaaaagttatttccaaggctagaaaaaatttaaaaatgcacgtcg tccgacggggggtaacaaaaattttctggaatggcccataatagccctca aatgaatgacctgtctgttcattaaaatacaaaagttaacatcaaaacaa aaatattagaGCAGAGccgcgagcggagctgcgtaccgtaagttggtcta atgtcgacatccgtcttctaataggatgataggaacaatagaaactgagg aaggtcggaatagctgattgacttttttgactagcGAGCGCGATGAGAGG AAAAATCTTtagtctatcagtgatttcgaccttcttattattcctatcta taaagaaggatgtcgaaattagaagacggatgtcgacattagaccaactt acggtagttcatttgttttaaaattttgctgctttgattggtcagtcatt tgatccGGCTATGCATGTTTCTCTCCACTGATTCAAGTTACCTTACTTCA CGGTAAGATTGTCTGATTTTGTATGTGAAGTTTGGCtattcaatatattt ttcaaccaTAACAGGtatataccgtaagttggtctaatatcgacatccct cgtctaatttcgacaccattctttagagacaggaataatatgaaagcttg aatcactgattgaaaaaggattattcctcccTGActactaagcaaagaaa aacagtttcaacctttctatcaatttcagctgataaaaagggtgtcagaa ttagaggaggggtgtcgacattagaccaagttacggtagccTATTGACCT TACTTTTTCTCATCAATAACCCTCTGGAGATTAAGAACAGTCAGGGAact ccctcaattgcggtatacttCAATTACAGTATACTGCAATAATTGCAGTA GTTTTCATTTGTGgttagcctacaaaggcttaggcagccatcgaaaaatt gttctgctCCCGCGCGCGTCATCGTATTGGTTGTAAAAAATACATGTGGG CGGGCAGGCGGTTGGTCAGAAAGATTTCAgggtttttgaaaaacttcttc TGATCAGTCTTTTTTGTGTGATTTCTTCCTACTTCTCTGCATTGGAAAGT CAATGGAAAATATGATGCAGGTCGGTTGACATGAacactcgggtaactta atgcatgtcccagaattgcattaatttttccgccccagttccagtcccta aaccataacaaactatacattttcgcaagcgtatttggatgtagaatacc gtattcggtgtaacttaaattccttctcagtataattagagatatgttaa aaaaacctgattatgacgtcatgattaatgacgtcataaatacaaaaagt tgaatatctcgagaaatataaatcaaaactttatgaaatttggaccagtg ataaagtacattgagatgtttcaaaaactTTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTTGaaagtatttcccaaaattaatgacgtcagcaaaaattgc aagaattcgaatttttgcgataaaatgctgacatcagcaaattttcaaat tttttaaaaataattctcctcctcttgatgagttctatcattggtcaaaa tttcataaagctttgagtattagttcttgagatattcaatttttaaaaat tatgacgtcataaatagtgacgtcataatcatgttttcttaaaaaaactc aaattctgttgagaaagaatttaagttacaccaaatacggtattctacat ccaaatacgcttccaaaaatgtatagtttgttatggtttagggactggaa ctggggcggaaaaattaatgcaattctgggacatgcattaagttacccga gcagaaaaatattttaatggcCGCCTTATGACGGGTACATATAGTGCTGa gtcgacaaagataaacaaagatcaACTGTAAAAAAACTTATAAGAAGAAA GCTTgtctttttaaaaagaatctgATCTGAGTACTTGCTACAAAAAATAA GAGGGTGATGGAagcaataaaattataaaaaaataagaaatacagAGGCC CCATAGTGCCATTCAAATTCACATTCATTATTCTAAAAATAGGAAACCAA CAAATTGACTatgaaattaaaaaaggcaagCCAGGTTTTCGGaggcaaaa atccaaaattttgtgGCTTGAACTTAGCTCGATCATCAATGTTGGGCTAA GATAATGTTTTGCTAtttccagacggtactaatcgataaattcgattatc gaagtaatcgaacgaccacttatcgattaacaatcaaatgtcaagtacca aaatttcaaaaaaattgtgagtattcgatcaatttcttaacaacccttcg aACACTCGATAACCGTTTGAAGACTTTAtatgttattgattactttcgat aactttgacaactttgataaccaattactatgatatatctttaagaaaaa ccaaaaaaaatgacctaaattttcgccctgggtttcctcaagtaactcat attgcgcgttctgattggtcggagaaaacgaaagtggttttcgcGCATGA ATCGAGTGTTTTAATTAGCCGAAATAaacttggtttcagattattATGAC ACGGTGCTactggaaacatatttgataaaatcgaaggCTGGAAGGTACTC AATACaatcgaaggtattcaatatgattgaAGGTTATCAAAAAGTAatcg aaatgattgaacaaatcgaaaaatggtcgaagaaaatgccataacctgga gtcgagtgagtattcgatcaccgataaaatcgataggtggtcactgacta ccttcgattattatcgatcattattgattacttcgatcacaatcgaacgt tcgattagtaccgtctgttTATTTTGGCCCAAACATGACCCCGAAATGTT CAGGGTATGTTTGGGCAAAATTGTAGGTTGTGAGTCAtcttatattattt tttgaacttttgattatttttcctATTTCTATAAATTAATCCAAAGGCTA CATATGTACATTTTCCTAGatactaaaaaataaaataaaaaatagcacTA GCCGGTACCAGGCGttgcacgccggttaagctgtagctgaacgcactaaa agtcctttgggtgttgaagctggcttaaaaaaacgatcaaataaaaaata gaaatctctAGAACAtttaactctaaccttccccgcgtgtcttatctttt aaccatatttggatcgtgtcccccgtgacataattttttgtttaggtcaa aagttatcagaaagagcatcgtttactgtaccagtgtcgtttgaaacgac tcagcaggtagttatttttctcgcttcgctcgcgttaaatatgccgtcca gtttaaatgacaatttttcaggaaaaagtgggaaggtcaGAAAGAATATT GCAACTCTTTGTTTTTATCAGATcgaaaaaaaagaagacaattctaagtt gcttttttaaacccttgtcataacttttcgaatttaaacataaaaaatga cgtacacactttttaacagtaacaacgacttgaatatttttataagaaga aagaagttaactaattttttcttatgctttatatcaccctttgaagtttt gaatgctgttgttgtccacaaactttttgatttttggcccagctagcttt agcgtactgggcctttcattagcattctgcccNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTTCAGATTGtgaaggatttgattggct gttagaacatgattgacagaataaaaaacaattgaaatcgtctttattgg ttaaaaacataaaaggagaaaatttaattaactattaaaactataagaac ataacagATGTAGtgtgttttaagaaaaacaatgtaacaaaccgtaacaa accttcttctctttaggaagatgttcttttaNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNGAGCAAgggactaaaagtcataattttaaaa cacaaacaaagcgaaaacgaaagtggtgacacacagacacacaaagcacc gctattaatatatagaatcTAAAAACACTGATAAAAAACAACATAActaa ttatatatattttaagaTTATCCAGAGACATCTTGGACAATCTTGCCTGA GGGTAACACCAATGATTCATGTTCACATACTTGACTGACTTTAGGCTCAA AATATTTGTATATTGCTGTTTGGATGACATCAGGTAGAATGGCTACCTGA TGTCATCCAAACAGCAATatacaaatattttgagattcgtTGTTGtagca tttttttttctttcactgtcaattttttgttttgccatTGAAATAAGGag gatttgaaaaattatcaaagatGCTTATGAATGCTGAGAAAGCACTTTAT CGTTTATTTCACTCTCAGGCAAAAGAATGCGCtccaaaacttctaaaggg atttatgaaaaaatatgaaaaactggtgctttttaatgaaatttaaacaT ATATATTCGAAAACTATgaaaaattacctaaattttgagccatagatgaa aaaatttgacctGACCCAACCTGaaccaaccttgaaaactaatttgaaga acaGCTTCCAAAGAAAAAGATCAATGAGAGAACACCCATTTATATGTGtg ggaattttttttactttacgtGTAATTAAAGCCTAACAAATCAAAGCGCT ATCTTGGGAatcaaaatgacaaattttggttggttgattttggctgctgc acaaatattttgtttcaagctttcaagttttaattatatATAACTGTCTT TGGAACTTGATTGAGGTAACTCTCTTCTTTGATGCTGCAAATaaatcctg tagatgactgatgttgtttttattgatagcttgatttcctagtttGACTA ACTGACAAGTAGTCATTATCTTTTGTTGGCAAAGGAAGGTCGACGTTTGA AAATACTTTATCATGCAGACTGAAGACACTTCTCCTATGGACAAAAAACA TGTTGTAAGAGACATTGTAAGGCTACATATCGGTGTCAGACACAAAGAAC TTACTTAAAAATAATAGAGATGCTCAAAATTGAGACACAGGTAAATTCCA AAAGAAATAACCATCATTGCTCTGAAAATGATCATAAAATAAATTGGggg ttgaaaaaaattaaaagatgtTAAATCTCTCTAATGTAGCTAAACATAAA TCTTGCAATCCAAGCCACAATAATCTTCCAACGTGAATATCACTGAGTCA ATAAACACAACaatttatttagatattatatgAACTTTTTAAAACACTTT AAACTTTAGAGTTAAGGAAAAATCACCTACAATTAAAATAATTCTTTCCT TTTTTAGGGCAGAATGTGAAAGTCAAGTAAAGGGTTTTCATGGCGCAAGG TACAAAAAGTTTGGCTCAGAACAAGAAGCACAAAGTTTCATAGATGAGGT GACGAATTAAACTAAAACCTCTTTTTATCAGGGAGGCtcttgatattttt taaattataacTGACTACTTGATAATTGAGTTGCTATTAGTGGGGTTACA GGTTTTGAACTTGTTTTGAAGGTTGTGGAGAGGAACAAGGGGTTATTTAA AGCTCAAAGGAATTCTTTATTTTaaatagatttaaaaagatatGTCATAT TAAAATACTCCTTTTCAAAGGTTTCATCCAGCAATTCTTCACTTGGTGTT AGAAGAACACAGACTTTTAAAGCAAAGTCACAAAACACTGGTAAGAATTT TCTCCTCCATACATCTGTTGATAGTTCTGTTGGTATGCTCAAGAGAAACA TTGTAGCAAAGGTTTGGCATGctatcttctcaaaaatattagAAAGTTAT AtcttgatgggttaaaatcaaccttcttcccaaatATAATTTTCGCTGTc gaagaattcttattcagttGCTCTTCATAACTTTCTGTTTACGATAGCGG CTTCCtgtcactttcaaaacttttcaaagtcttcCAAAGTCACACTCGAA TGTCCAGCCACGATGGCCAGCCACGATGGCTAAATAGATCTTATTTATAA TTCTTCTAAGCCATTTacttaattgtggttaaaaattgcaataCAATGTT ATCTTCTTTCTCCTTTCTTTCATAGAATGAAAATCGTATCATTATTTCGG CAGCTATCTTTTTTCCTTTAGAGTTTTTTATATGTATAGTGATTCGCTGG ATTGGGACATGCAGCGTGCAACACTGCGCATACGGCTATAGATAATGctt ctttcaaattcaatttgtGTTCTACACCATTATATGTAATGTCTTTACAA TAGTACATAATATTatgaattgaaagaaaaataatcacaatcaaatttta ttttttagcctTTCCAGGATCTGTTACAGCTCTATCTAAAAGAACCAAAT GTAGGTACTCAAAAAATTTGCATTCCCTATAAGGATACCCTTATTAAGCT CGACcaatatatataaaaataaaaattagaaaatatttaGATGTTGGAAT ATTTGAATATTTAGTTGGGATTTCTTCGTTCATGACTATACAATAAGTAG CtaattttaaagctattttctcCTTTCAGTGATAGAAGCTAGAAGTTTGT CAACACAAGCCTCGTCCAGCTCCACATCCTCCAAGCCCGTTGTTTATACA GATGGTTGCTGCCGTGGTAACGGTAGAAGTGGAGCCATCGGTGGAATCGG TGTTTATTGGGGACCAGATCATCCTAGGTACGCAATAATGTGATAATATT TTGGTTGAATGTATCCAGGAGTTGATTCTTTGCGTTTGTTTTGTTACCAT ATCGTGTTTTGTGTTGACATTTAAAAATAAACTATTTCCTTTTCTTAGGG GtttccttttttgatttttttcaggaatATAAGTGAACCGTTACTAGTAG ACGAGCCAACTAACCAGAAAGCTGAACTGGAGGTTAGATGAGTACTGACA TTATTTAATTCACGAATAGACCTTGTTCTCCACGTCAATGTGTAGAAATC ATTATTTCAATGGATATGGCgatgtcaatattttttataggggtcagtag cgtagacaggcgTGAAGGAACAATTgcttaggagagcagatttttacgaC GAAGCACTTACCTACCActtacttgtggtataaaaacaTAGTTACTGTGC TGTTTAAATCTCCTCTCCTAAACAAATATTCCTTCatccctgtctacgct actagGGGTAATTAATTGTTTGATTGCATGATAAATTGCGTGGTGGATTT TAATCGTAGCTGTTTAGAACATGCGGATCTTCACACTCCCCTGTATGTAT GAGAAAGGAGTTGTCAGCCCAAGTCCGCCATAACTTTTCAGGCTTTAAGC TTTTAGGGGGTTAACAAAGTTTAAGTTAAAACATGTAGTATATCTGATAT TGGTTACAGAATGTGGTATCTTCTAACATAAATGTCAATGCAATGAGTCG GGGGTTTTTATAGGGAGATTAGGGAGGCTTTTCACACTATGGCTGTTATA TAATATTCCATTACTTTGTATCCTTCTTTTGCAATATCCAGGCCGCCATC AGAGCGATTGATTGTGCGATAGGAATGGGTCTGGATGATCTTGAATTACG AACAGATAGTACATACACCATCAAATGTAAGAAAATCTCATCATATTTAT GACAGTGAAAGTCCTTATGAATTGCTTCAAACTCATCAAAACTCAATCTC AAATTGTTGCTGCTAAATTGTACCACGTTGATCTCGACATCATAAGGTAG TATGAAACACCTTAAGatattgataatttgataaGCTGTAGACCTTTGGT TTAACAAATGGTATAGACTTCTTCAAAAGTACAAAGGTTTTGTATCTCTT CTTTCCAGCAATGACGGAATGGATTCCACGTTGGGAGCGGAACGGATGGA AAACTTCCAAAGGAACTGATGTTCTGAACAAAGAACAAATGATCCGGTTG AACGATTTATGTAAACGGATTGATATAAAATGGGTGAGGAGTTTTgcata aaaacaattattctacaaaaattcaaaattccaaAGGGGTTTAAACCTGC ATTTCCAGCCACACAGGGATGGACCTcatcaacagggggtatacggtttt tttctggNGGgtttacagcatttccagccacacagtgatggacctcctca acaggggtatacgttttttttctgcaaaagcccaagttgaaaaattgaaa gaaccAGGACTCTTGGCATGATGCTTGGGTTCAGTTGCACACCCTTtcga tttccttttttttaatcaaaaagcCCTGACCAGGACTTATTAGGACCTCC TATTAGCTAACTTTGAAGCAGATTCACACTATTTTTATGGTTCGTTTGCT GACTTTAATACACCGTTCATTTAGACGCACGTTCGCGGACACAAAGGTAT CCATGGCAACGAAGAAGCAGATCGATTGGCCAATGAAGGAGCAATGAAAA CTTGAAAACGAAGCGTGGTTGTAAAACGGCGACTAACGAACGTGGGATTT TCCTTAGTGTCACTCATGGTGTAATGTTGGAAATTCTGTCaaattccaaa taaataaatgaagaaGGACTCGCCTACTTTCAGTTATGTTACCTGACAGC TTCAAATGACAATGTTAAAGacaatttaaacagtattactTGTAAAAGGA CATTACAGTGTGCCCGAAAGAAAATGGGACGGATTTTATAAATTTAGTat ctttatttatttaaattttgttcGACTTACCTACCTAGAAACACTGTAGT TTTTGTTAATGTTTACCATTTGCAATACGGTGTTTTGTCCTCGTTGTGGA CAATTGTATATCATCCACAAATGCTCTGCtgagaaagaaaaacttttaaa taacaATAATATAGGAACTTTAGCATCATCG

Coding sequence (CDS) from alignment at sc0000007:1106025..1116755+

>TCONS_00001055 ID=TCONS_00001055|Name=TCONS_00001055|organism=Clytia hemisphaerica|type=CDS|length=7398bp|location=Sequence derived from alignment at sc0000007:1106025..1116755+ (Clytia hemisphaerica)
ATGAATCGAACCTTCTTCAATAAGATTTTCGACCTTCTTTGTTCTTCCTT
TATGGCTCGTAGTAAAGGAGGTGGATTTTATGCTGTTAAGCGTGGCAGGA
ATATTGGAATTTACATGACATGGGCAGAATGTGAAAGTCAAGTAAAGGGT
TTTCATGGCGCAAGGTACAAAAAGTTTGGCTCAGAACAAGAAGCACAAAG
TTTCATAGATGAGGTTTCATCCAGCAATTCTTCACTTGGTGTTAGAAGAA
CACAGACTTTTAAAGCAAAGTCACAAAACACTGcctTTCCAGGATCTGTT
ACAGCTCTATCTAAAAGAACCAAATTGATAGAAGCTAGAAGTTTGTCAAC
ACAAGCCTCGTCCAGCTCCACATCCTCCAAGCCCGTTGTTTATACAGATG
GTTGCTGCCGTGGTAACGGTAGAAGTGGAGCCATCGGTGGAATCGGTGTT
TATTGGGGACCAGATCATCCTAGgaatATAAGTGAACCGTTACTAGTAGA
CGAGCCAACTAACCAGAAAGCTGAACTGGAGGCCGCCATCAGAGCGATTG
ATTGTGCGATAGGAATGGGTCTGGATGATCTTGAATTACGAACAGATAGT
ACATACACCATCAAATCAATGACGGAATGGATTCCACGTTGGGAGCGGAA
CGGATGGAAAACTTCCAAAGGAACTGATGTTCTGAACAAAGAACAAATGA
TCCGGTTGAACGATTTATGTAAACGGATTGATATAAAATGGACGCACGTT
CGCGGACACAAAGGTATCCATGGCAACGAAGAAGCAGATCGATTGGCCAA
TGAAGGAGCAATGAAAACTTGAATGAATCGAACCTTCTTCAATAAGATTT
TCGACCTTCTTTGTTCTTCCTTTATGGCTCGTAGTAAAGGAGGTGGATTT
TATGCTGTTAAGCGTGGCAGGAATATTGGAATTTACATGACATGGGCAGA
ATGTGAAAGTCAAGTAAAGGGTTTTCATGGCGCAAGGTACAAAAAGTTTG
GCTCAGAACAAGAAGCACAAAGTTTCATAGATGAGGTTTCATCCAGCAAT
TCTTCACTTGGTGTTAGAAGAACACAGACTTTTAAAGCAAAGTCACAAAA
CACTGcctTTCCAGGATCTGTTACAGCTCTATCTAAAAGAACCAAATTGA
TAGAAGCTAGAAGTTTGTCAACACAAGCCTCGTCCAGCTCCACATCCTCC
AAGCCCGTTGTTTATACAGATGGTTGCTGCCGTGGTAACGGTAGAAGTGG
AGCCATCGGTGGAATCGGTGTTTATTGGGGACCAGATCATCCTAGgaatA
TAAGTGAACCGTTACTAGTAGACGAGCCAACTAACCAGAAAGCTGAACTG
GAGGCCGCCATCAGAGCGATTGATTGTGCGATAGGAATGGGTCTGGATGA
TCTTGAATTACGAACAGATAGTACATACACCATCAAATCAATGACGGAAT
GGATTCCACGTTGGGAGCGGAACGGATGGAAAACTTCCAAAGGAACTGAT
GTTCTGAACAAAGAACAAATGATCCGGTTGAACGATTTATGTAAACGGAT
TGATATAAAATGGACGCACGTTCGCGGACACAAAGGTATCCATGGCAACG
AAGAAGCAGATCGATTGGCCAATGAAGGAGCAATGAAAACTTGAATGAAT
CGAACCTTCTTCAATAAGATTTTCGACCTTCTTTGTTCTTCCTTTATGGC
TCGTAGTAAAGGAGGTGGATTTTATGCTGTTAAGCGTGGCAGGAATATTG
GAATTTACATGACATGGGCAGAATGTGAAAGTCAAGTAAAGGGTTTTCAT
GGCGCAAGGTACAAAAAGTTTGGCTCAGAACAAGAAGCACAAAGTTTCAT
AGATGAGGTTTCATCCAGCAATTCTTCACTTGGTGTTAGAAGAACACAGA
CTTTTAAAGCAAAGTCACAAAACACTGcctTTCCAGGATCTGTTACAGCT
CTATCTAAAAGAACCAAATTGATAGAAGCTAGAAGTTTGTCAACACAAGC
CTCGTCCAGCTCCACATCCTCCAAGCCCGTTGTTTATACAGATGGTTGCT
GCCGTGGTAACGGTAGAAGTGGAGCCATCGGTGGAATCGGTGTTTATTGG
GGACCAGATCATCCTAGgaatATAAGTGAACCGTTACTAGTAGACGAGCC
AACTAACCAGAAAGCTGAACTGGAGGCCGCCATCAGAGCGATTGATTGTG
CGATAGGAATGGGTCTGGATGATCTTGAATTACGAACAGATAGTACATAC
ACCATCAAATCAATGACGGAATGGATTCCACGTTGGGAGCGGAACGGATG
GAAAACTTCCAAAGGAACTGATGTTCTGAACAAAGAACAAATGATCCGGT
TGAACGATTTATGTAAACGGATTGATATAAAATGGACGCACGTTCGCGGA
CACAAAGGTATCCATGGCAACGAAGAAGCAGATCGATTGGCCAATGAAGG
AGCAATGAAAACTTGAATGAATCGAACCTTCTTCAATAAGATTTTCGACC
TTCTTTGTTCTTCCTTTATGGCTCGTAGTAAAGGAGGTGGATTTTATGCT
GTTAAGCGTGGCAGGAATATTGGAATTTACATGACATGGGCAGAATGTGA
AAGTCAAGTAAAGGGTTTTCATGGCGCAAGGTACAAAAAGTTTGGCTCAG
AACAAGAAGCACAAAGTTTCATAGATGAGGTTTCATCCAGCAATTCTTCA
CTTGGTGTTAGAAGAACACAGACTTTTAAAGCAAAGTCACAAAACACTGc
ctTTCCAGGATCTGTTACAGCTCTATCTAAAAGAACCAAATTGATAGAAG
CTAGAAGTTTGTCAACACAAGCCTCGTCCAGCTCCACATCCTCCAAGCCC
GTTGTTTATACAGATGGTTGCTGCCGTGGTAACGGTAGAAGTGGAGCCAT
CGGTGGAATCGGTGTTTATTGGGGACCAGATCATCCTAGgaatATAAGTG
AACCGTTACTAGTAGACGAGCCAACTAACCAGAAAGCTGAACTGGAGGCC
GCCATCAGAGCGATTGATTGTGCGATAGGAATGGGTCTGGATGATCTTGA
ATTACGAACAGATAGTACATACACCATCAAATCAATGACGGAATGGATTC
CACGTTGGGAGCGGAACGGATGGAAAACTTCCAAAGGAACTGATGTTCTG
AACAAAGAACAAATGATCCGGTTGAACGATTTATGTAAACGGATTGATAT
AAAATGGACGCACGTTCGCGGACACAAAGGTATCCATGGCAACGAAGAAG
CAGATCGATTGGCCAATGAAGGAGCAATGAAAACTTGAATGAATCGAACC
TTCTTCAATAAGATTTTCGACCTTCTTTGTTCTTCCTTTATGGCTCGTAG
TAAAGGAGGTGGATTTTATGCTGTTAAGCGTGGCAGGAATATTGGAATTT
ACATGACATGGGCAGAATGTGAAAGTCAAGTAAAGGGTTTTCATGGCGCA
AGGTACAAAAAGTTTGGCTCAGAACAAGAAGCACAAAGTTTCATAGATGA
GGTTTCATCCAGCAATTCTTCACTTGGTGTTAGAAGAACACAGACTTTTA
AAGCAAAGTCACAAAACACTGcctTTCCAGGATCTGTTACAGCTCTATCT
AAAAGAACCAAATTGATAGAAGCTAGAAGTTTGTCAACACAAGCCTCGTC
CAGCTCCACATCCTCCAAGCCCGTTGTTTATACAGATGGTTGCTGCCGTG
GTAACGGTAGAAGTGGAGCCATCGGTGGAATCGGTGTTTATTGGGGACCA
GATCATCCTAGgaatATAAGTGAACCGTTACTAGTAGACGAGCCAACTAA
CCAGAAAGCTGAACTGGAGGCCGCCATCAGAGCGATTGATTGTGCGATAG
GAATGGGTCTGGATGATCTTGAATTACGAACAGATAGTACATACACCATC
AAATCAATGACGGAATGGATTCCACGTTGGGAGCGGAACGGATGGAAAAC
TTCCAAAGGAACTGATGTTCTGAACAAAGAACAAATGATCCGGTTGAACG
ATTTATGTAAACGGATTGATATAAAATGGACGCACGTTCGCGGACACAAA
GGTATCCATGGCAACGAAGAAGCAGATCGATTGGCCAATGAAGGAGCAAT
GAAAACTTGAATGAATCGAACCTTCTTCAATAAGATTTTCGACCTTCTTT
GTTCTTCCTTTATGGCTCGTAGTAAAGGAGGTGGATTTTATGCTGTTAAG
CGTGGCAGGAATATTGGAATTTACATGACATGGGCAGAATGTGAAAGTCA
AGTAAAGGGTTTTCATGGCGCAAGGTACAAAAAGTTTGGCTCAGAACAAG
AAGCACAAAGTTTCATAGATGAGGTTTCATCCAGCAATTCTTCACTTGGT
GTTAGAAGAACACAGACTTTTAAAGCAAAGTCACAAAACACTGcctTTCC
AGGATCTGTTACAGCTCTATCTAAAAGAACCAAATTGATAGAAGCTAGAA
GTTTGTCAACACAAGCCTCGTCCAGCTCCACATCCTCCAAGCCCGTTGTT
TATACAGATGGTTGCTGCCGTGGTAACGGTAGAAGTGGAGCCATCGGTGG
AATCGGTGTTTATTGGGGACCAGATCATCCTAGgaatATAAGTGAACCGT
TACTAGTAGACGAGCCAACTAACCAGAAAGCTGAACTGGAGGCCGCCATC
AGAGCGATTGATTGTGCGATAGGAATGGGTCTGGATGATCTTGAATTACG
AACAGATAGTACATACACCATCAAATCAATGACGGAATGGATTCCACGTT
GGGAGCGGAACGGATGGAAAACTTCCAAAGGAACTGATGTTCTGAACAAA
GAACAAATGATCCGGTTGAACGATTTATGTAAACGGATTGATATAAAATG
GACGCACGTTCGCGGACACAAAGGTATCCATGGCAACGAAGAAGCAGATC
GATTGGCCAATGAAGGAGCAATGAAAACTTGAATGAATCGAACCTTCTTC
AATAAGATTTTCGACCTTCTTTGTTCTTCCTTTATGGCTCGTAGTAAAGG
AGGTGGATTTTATGCTGTTAAGCGTGGCAGGAATATTGGAATTTACATGA
CATGGGCAGAATGTGAAAGTCAAGTAAAGGGTTTTCATGGCGCAAGGTAC
AAAAAGTTTGGCTCAGAACAAGAAGCACAAAGTTTCATAGATGAGGTTTC
ATCCAGCAATTCTTCACTTGGTGTTAGAAGAACACAGACTTTTAAAGCAA
AGTCACAAAACACTGcctTTCCAGGATCTGTTACAGCTCTATCTAAAAGA
ACCAAATTGATAGAAGCTAGAAGTTTGTCAACACAAGCCTCGTCCAGCTC
CACATCCTCCAAGCCCGTTGTTTATACAGATGGTTGCTGCCGTGGTAACG
GTAGAAGTGGAGCCATCGGTGGAATCGGTGTTTATTGGGGACCAGATCAT
CCTAGgaatATAAGTGAACCGTTACTAGTAGACGAGCCAACTAACCAGAA
AGCTGAACTGGAGGCCGCCATCAGAGCGATTGATTGTGCGATAGGAATGG
GTCTGGATGATCTTGAATTACGAACAGATAGTACATACACCATCAAATCA
ATGACGGAATGGATTCCACGTTGGGAGCGGAACGGATGGAAAACTTCCAA
AGGAACTGATGTTCTGAACAAAGAACAAATGATCCGGTTGAACGATTTAT
GTAAACGGATTGATATAAAATGGACGCACGTTCGCGGACACAAAGGTATC
CATGGCAACGAAGAAGCAGATCGATTGGCCAATGAAGGAGCAATGAAAAC
TTGAATGAATCGAACCTTCTTCAATAAGATTTTCGACCTTCTTTGTTCTT
CCTTTATGGCTCGTAGTAAAGGAGGTGGATTTTATGCTGTTAAGCGTGGC
AGGAATATTGGAATTTACATGACATGGGCAGAATGTGAAAGTCAAGTAAA
GGGTTTTCATGGCGCAAGGTACAAAAAGTTTGGCTCAGAACAAGAAGCAC
AAAGTTTCATAGATGAGGTTTCATCCAGCAATTCTTCACTTGGTGTTAGA
AGAACACAGACTTTTAAAGCAAAGTCACAAAACACTGcctTTCCAGGATC
TGTTACAGCTCTATCTAAAAGAACCAAATTGATAGAAGCTAGAAGTTTGT
CAACACAAGCCTCGTCCAGCTCCACATCCTCCAAGCCCGTTGTTTATACA
GATGGTTGCTGCCGTGGTAACGGTAGAAGTGGAGCCATCGGTGGAATCGG
TGTTTATTGGGGACCAGATCATCCTAGgaatATAAGTGAACCGTTACTAG
TAGACGAGCCAACTAACCAGAAAGCTGAACTGGAGGCCGCCATCAGAGCG
ATTGATTGTGCGATAGGAATGGGTCTGGATGATCTTGAATTACGAACAGA
TAGTACATACACCATCAAATCAATGACGGAATGGATTCCACGTTGGGAGC
GGAACGGATGGAAAACTTCCAAAGGAACTGATGTTCTGAACAAAGAACAA
ATGATCCGGTTGAACGATTTATGTAAACGGATTGATATAAAATGGACGCA
CGTTCGCGGACACAAAGGTATCCATGGCAACGAAGAAGCAGATCGATTGG
CCAATGAAGGAGCAATGAAAACTTGAATGAATCGAACCTTCTTCAATAAG
ATTTTCGACCTTCTTTGTTCTTCCTTTATGGCTCGTAGTAAAGGAGGTGG
ATTTTATGCTGTTAAGCGTGGCAGGAATATTGGAATTTACATGACATGGG
CAGAATGTGAAAGTCAAGTAAAGGGTTTTCATGGCGCAAGGTACAAAAAG
TTTGGCTCAGAACAAGAAGCACAAAGTTTCATAGATGAGGTTTCATCCAG
CAATTCTTCACTTGGTGTTAGAAGAACACAGACTTTTAAAGCAAAGTCAC
AAAACACTGcctTTCCAGGATCTGTTACAGCTCTATCTAAAAGAACCAAA
TTGATAGAAGCTAGAAGTTTGTCAACACAAGCCTCGTCCAGCTCCACATC
CTCCAAGCCCGTTGTTTATACAGATGGTTGCTGCCGTGGTAACGGTAGAA
GTGGAGCCATCGGTGGAATCGGTGTTTATTGGGGACCAGATCATCCTAGg
aatATAAGTGAACCGTTACTAGTAGACGAGCCAACTAACCAGAAAGCTGA
ACTGGAGGCCGCCATCAGAGCGATTGATTGTGCGATAGGAATGGGTCTGG
ATGATCTTGAATTACGAACAGATAGTACATACACCATCAAATCAATGACG
GAATGGATTCCACGTTGGGAGCGGAACGGATGGAAAACTTCCAAAGGAAC
TGATGTTCTGAACAAAGAACAAATGATCCGGTTGAACGATTTATGTAAAC
GGATTGATATAAAATGGACGCACGTTCGCGGACACAAAGGTATCCATGGC
AACGAAGAAGCAGATCGATTGGCCAATGAAGGAGCAATGAAAACTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000598XLOC_000598Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001055-exon-sc0000007-1491911889:1106025..1106927TCONS_00001055-exon-sc0000007-1491911889:1106025..1106927Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1510915933:1106025..1106927TCONS_00001055-exon-sc0000007-1510915933:1106025..1106927Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1575043694:1106025..1106927TCONS_00001055-exon-sc0000007-1575043694:1106025..1106927Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1491911889:1113232..1113322TCONS_00001055-exon-sc0000007-1491911889:1113232..1113322Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1510915933:1113232..1113322TCONS_00001055-exon-sc0000007-1510915933:1113232..1113322Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1575043694:1113232..1113322TCONS_00001055-exon-sc0000007-1575043694:1113232..1113322Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1491911889:1113545..1113614TCONS_00001055-exon-sc0000007-1491911889:1113545..1113614Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1510915933:1113545..1113614TCONS_00001055-exon-sc0000007-1510915933:1113545..1113614Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1575043694:1113545..1113614TCONS_00001055-exon-sc0000007-1575043694:1113545..1113614Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1491911889:1114233..1114274TCONS_00001055-exon-sc0000007-1491911889:1114233..1114274Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1510915933:1114233..1114274TCONS_00001055-exon-sc0000007-1510915933:1114233..1114274Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1575043694:1114233..1114274TCONS_00001055-exon-sc0000007-1575043694:1114233..1114274Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1491911889:1114454..1114601TCONS_00001055-exon-sc0000007-1491911889:1114454..1114601Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1510915933:1114454..1114601TCONS_00001055-exon-sc0000007-1510915933:1114454..1114601Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1575043694:1114454..1114601TCONS_00001055-exon-sc0000007-1575043694:1114454..1114601Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1491911889:1114749..1114806TCONS_00001055-exon-sc0000007-1491911889:1114749..1114806Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1510915933:1114749..1114806TCONS_00001055-exon-sc0000007-1510915933:1114749..1114806Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1575043694:1114749..1114806TCONS_00001055-exon-sc0000007-1575043694:1114749..1114806Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1491911889:1115416..1115500TCONS_00001055-exon-sc0000007-1491911889:1115416..1115500Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1510915933:1115416..1115500TCONS_00001055-exon-sc0000007-1510915933:1115416..1115500Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1575043694:1115416..1115500TCONS_00001055-exon-sc0000007-1575043694:1115416..1115500Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1491911889:1115733..1115857TCONS_00001055-exon-sc0000007-1491911889:1115733..1115857Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1510915933:1115733..1115857TCONS_00001055-exon-sc0000007-1510915933:1115733..1115857Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1575043694:1115733..1115857TCONS_00001055-exon-sc0000007-1575043694:1115733..1115857Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1491911889:1116249..1116755TCONS_00001055-exon-sc0000007-1491911889:1116249..1116755Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1510915933:1116249..1116755TCONS_00001055-exon-sc0000007-1510915933:1116249..1116755Clytia hemisphaericaexon
TCONS_00001055-exon-sc0000007-1575043694:1116249..1116755TCONS_00001055-exon-sc0000007-1575043694:1116249..1116755Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001055-proteinTCONS_00001055-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1106025..1116755 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.1959 28.4935 33.0875 36.78 5.56422 5.21092 5.46836 6.58996 7.12416 7.83867 8.26744 5.45218 4.48562 6.74091 6.42347 4.94328 8.35061 8.63685 4.70285 3.22624 8.83448 8.72334 19.9072 23.0107 6.76519 7.8362 7.59634 4.25164 13.7438 16.9061
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002156RNaseH_domain
IPR017067RNase_H1_euk
IPR011320RNase_H1_N
IPR012337RNaseH-like_dom
IPR009027Ribosomal_L9/RNase_H1_N
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004523RNA-DNA hybrid ribonuclease activity
GO:0000287magnesium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
Blast
BLAST of TCONS_00001055 vs. Swiss-Prot (Human)
Match: RNH1 (Ribonuclease H1 OS=Homo sapiens GN=RNASEH1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 1.185e-52
Identity = 111/257 (43.19%), Postives = 149/257 (57.98%), Query Frame = 2
Query:  851 GGFYAVKRGRNIGIYMTWAECESQVKGFHGARYKKFGSEQEAQSFI-----DEVSSSNSSLGVRRTQTFKAKSQNTAFPG----SVTALSKRTKL-IEARXXXXXXXXXXXXXKPVVYTDGCCXXXXXXXXXXXXXVYWGPDHPRNISEPLLVDEPTNQKAELEAAIRAIDCAIGMGLDDLELRTDSTYTIKSMTEWIPRWERNGWKTSKGTDVLNKEQMIRLNDLCKRIDIKWTHVRGHKGIHGNEEADRLANEGA 1591
            G FYAV+RGR  G+++TW EC +QV  F  AR+KKF +E EA +F+      EVS  + +   + ++   +K       G    S    +K  K  +E     ++ + S      VVYTDGCC  NGR     GIGVYWGP HP N+    L    TNQ+AE+ AA +AI+ A    ++ L L TDS +TI  +T W+  W++NGWKTS G +V+NKE  + L  L + +DI+W HV GH G  GNEEADRLA EGA
Sbjct:   26 GMFYAVRRGRKTGVFLTWNECRAQVDRFPAARFKKFATEDEAWAFVRKSASPEVSEGHENQHGQESEAKASKRLREPLDGDGHESAEPYAKHMKPSVEPAPPVSRDTFSYMGDFVVVYTDGCCSSNGRRRPRAGIGVYWGPGHPLNVG-IRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTINGITNWVQGWKKNGWKTSAGKEVINKEDFVALERLTQGMDIQWMHVPGHSGFIGNEEADRLAREGA 281          
The following BLAST results are available for this feature:
BLAST of TCONS_00001055 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RNH11.185e-5243.19Ribonuclease H1 OS=Homo sapiens GN=RNASEH1 PE=1 SV... [more]
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