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TCONS_00000881 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000881
Unique NameTCONS_00000881
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1787

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000881 ID=TCONS_00000881|Name=TCONS_00000881|organism=Clytia hemisphaerica|type=transcript|length=1787bp
tttttattttatatttgtgaaaatcaatttgtaattaaaaaaagttCTCA
CAGAAAATAACACAGATGCAAAATTAAAGGTGTAACCTGAGATGGTGGTG
CACCCTTGGGCTTTGGCTTTGCCCATTCAGCACATCGTCAAGTACTCGCC
TCGATTGGTTATCAATTTCTCtccagagaaaaaaattctgcaaaaacTTC
TACATTTTTCATCGTAAAACTCACACATCAAGATGCAAGCCGTCAAATCG
AAATTAGCTTCATTGAAAGCTAAATTGAAGGAATCCGAAGATGCAGCTAA
TGATGCCGAAGCTGAACTCAACGAGATCAAAGAAAAAACAGAAGAAATGG
AAACTTTGGGAGCTGATCTCTCGACCAAGTTAGGTGAAATTGAGGATAAA
CTCGACGAAGCAGAATCACAATTAAACGAACTCACTGCCAATGTAGCAGA
AAACGAAAAAACATCCGACGAAACAGATCAAGCAAAAAAGATTATGGAAA
ACAGAGGTCGAAATGATGCTAGCAAAATTGAAGAACTCGAACGAGAATTA
GAAACATTGAACGAAATGATCAAAGAAAATGAAGGGGAATATGAAGAGGA
CTTGACATTAGTAACCGAGCTTGAAGAACAATTAGACGAAGCAGAAGAAC
GACACGAGTCCGCTGATGCCAAACTGAAAGAACTCGATTCTCAATATATA
TTGATCGGAAACAGTCATAAAAGTATGGTGACGAACGAAGATGCAGCTGC
CGATCGTGTAAGCCAAGCTGATTCAAAAATCTCTGAAATGGTTAGCCAAG
TCGACGAAAAAGAAGAATTGGCAACCGCTATGGAAGCACAATGGAAAGAA
CTTGAAGACGAAATGGATAAACTTGCGATGGAGGAAGAAGAATCAAAATT
AACGTTCgagaaaaaacaagaagaacTTCAACTGGCTCTTGCAGAAATTA
ACGATTTGTaaacatttgttttttttagtcaACTCTAGATAATATCTTTG
CATACGCTTCCCCTATTTCCTTGGGTACTCAGCATTGAATTTTCTACAAA
TTCAAAGATTAGATACCCTAACTCATGGTGTACGCGAAActttacttttc
atttttcctcatttttataaaaataattttgtaaattttttgatacctta
tttttctctttttgtatGTATTTATTGTATGAAAATTTAAGACTCCCGTT
TTTTTTGTATTATCATTTTTGACCGCACCTGTAAAATAGCAACTTTTTCG
TTTAAACCAGACAAAGAATAGGAAAATTCAAatattaatatttcttttct
gtCATAATCTTCAACAGACTTAGCGCCACCGGTAGCATCGTCTTGTAcgg
ttaaaaaattttaacacccTCTTGAATACTTGAAATCATGCGTTGAATTC
GGGCTCGTGACAAAACTTTCAGATTTACGGCATGTCGGTGAAGTTAATCG
AGCACGCTGGGGAGACAACACAATTCAAAAGAGAACACAATTTGCTGTAA
GAAGTGCTAGACCATGTATGAGCAACATCGAGGGACTCAATGTTATCATT
ATCTACTCCTGACATTAGACAAACATTGCTCTAAGACAACTCATTTTAAA
GACTTTTAGACGAAATCTCGAAAATGGAAAGACTAGCCTTATCTTAGACT
TTCTCTTAAATATTCATCTTCCTATTTTCAAAGGGTTTAAAACTATGCCA
CAATAACTGAAGGTACTGTAACTGTTTTTCTCAAATAGTTTATTTTCAAT
TACTTTCAGAGGTTTACCCTGTACGCAGAAGAATTAT
Run BLAST on NCBI

protein sequence of TCONS_00000881-protein

>TCONS_00000881-protein ID=TCONS_00000881-protein|Name=TCONS_00000881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
MQAVKSKLASLKAKLKESEDAANDAEAELNEIKEKTEEMETLGADLSTKL
GEIEDKLDEAESQLNELTANVAENEKTSDETDQAKKIMENRGRNDASKIE
ELERELETLNEMIKENEGEYEEDLTLVTELEEQLDEAEERHESADAKLKE
LDSQYILIGNSHKSMVTNEDAAADRVSQADSKISEMVSQVDEKEELATAM
EAQWKELEDEMDKLAMEEEESKLTFEKKQEELQLALAEINDL
Run BLAST on NCBI

transcript from alignment at sc0000005:1354866..1363302-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000881 ID=TCONS_00000881|Name=TCONS_00000881|organism=Clytia hemisphaerica|type=transcript|length=8437bp|location=Sequence derived from alignment at sc0000005:1354866..1363302- (Clytia hemisphaerica)
TTTTTATTTTATATTTGTGAAAATCAATTTGTAATTAAAAAAAGTTCTCA CAGAAAATAACACAGATGCAAAATTAAAGGTGTAACCTGAGATGGTGGTG CACCCTTGGGCTTTGGCTTTGCCCATTCAGGTAGCTCTTTATCAGGAACG CATTGCTTTTCCATTTTATTATCTCACCCTTGCCGCAGGAGGGTCACGTT TAAGTTTTTCTTGTTTCTCAGAATTATCAGTTTTGTCAGTTACCCTAAAA AACAGAATTGAAATTGAACCTAAGTAAGGGTTTAATGAATTACATTCCCC TTTAAACAACTTTTTCATTTGTATATAATAAGTCACTGTGTATATAAACT AAAATTTTTAATATGAGAACTTTAGAAAATGAGAAAGACTTTTTTTGAAC AGCCAGGTAAGCACAAAATCTTTAAAGATTGAATGAAAATTAGGAATCTC CCCAAACTCAGCATAAATTCGTGCAAAATAAATATAAAAGGCATTTTTTA CCACAAAAACCCCTCTAATATTTTATCTAGAAAAGTTGGAATTTTTTGCA GTATATGTGCATTTATTAGGATCTTCTTATTTTACAATCTCTTAAAAACG GTGTCAGAATCAGATGAGGGATGTCAACAACAGTCTTTTAAATAACTATA TTTCACCTGATTTCACCAACAAAATAAAAACAAACAGCAAGAAAAAACCA TGTGCAAGTCCAGAAAATTTTTATTAAATAAAATGTTTACAACCTCAAGA TGTCAAGTTAAGACTGTTGTAAGAGAGGAACCGTCAACTGCTCTAACTTG GGACGATTGGTGGTAACAAGGGACTGGTTGATATCTGGTCTGTATTTTCA CTTACTGTTAAAATCTTTTTAATGACAAATTTGTTTTGATAACTCCACCA AGTTTATCAATCATACCGTGAAAAAGGGTAACTTGCATCAGTGGAGGCTA ACATGCATAGCCCTCAAATGAAAGGCCCGGCTGGTCATTAAAATACGAAA ATAAATCGAAACAAAAATGGTAGAGTNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNCGGAGCTGCGTATGTGTATTTTAATGACCAGCCAG GTCATTCATTTGAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACC CTTTCTCACGGTACTTCTTCGTTACGCTTAGAGTGCACAGACACTTGCGG AGTGCACAGACACTCGCGTGTGTTCCACTACGGATTTTTTTCATATTTCG ATTTAAAAGCCTACTCGATGCGAAAGAGAAATCGTGTATTTTTTAATACG GCGTTCATTATTAACTCAAATCAAATGACTTTGGAGGTTCCGTGAAATGG TGGCCGAATTGCCGTCCCATGTTTTGTCAGATAGTCCCAAGTTAGAGCAG TTGACGGTAATACCGCAAAGTAGGGTAACTTGCATCAGTGGAGGGAAACT TGCATAGCCATCAAATGCCTGACCAACCAAAAGCAGCAAAATTTCAAAAC AAATGAACTACGCAGCTTTGCTCGCAGCTCAACTCTACCATTTTTGTTTT GATTTAACTTTGAATTTTAATGACCAGCCAGGTTATTCATTTGAGAGCTA TGCATGTTAGCCTCCACTGATGCAAGTTACCCAAGCTCACGGTACGGAGC AGATAATTTACGACCCAAATGGCTGGAGTAATTTACTATGCAGAACTGAG TCAATAGGTTGTCACATTCACCTAAACGACTATACTAGAAACTAGATTAT CCTGGACTGTACAAATAATTTCCACCATTTTTCAGAAAAATGGCTGATTG TTCATTGTTGTTTGTGAATCAATCTGTTCTCACCACTTTGAAAGAAGTTA AATAATAAAAAAATTCATGATGATTGTAATCGTATGACACTAGTCATGCA AACAACCTGACAACAAACAAGACGATAATAAATAAATGTACAACAACATC AAATTCATGCTATTTTTCTAAATTTCAATTTTTTTTAACTGTTAGCTGCC CTGGCTATTGTCTGATTGTGAAAAATGAAGACAATAAACTATAAATTTAA GAAAAGGAAAAGCAGCCCTTTTCATTATTACTTAATGTTTTTGCCCTCTT GCAACTTGCAAGACTTGACTTTCCATTCAAGGTCTTTTTTTTAACCAAAA TTCCAAAATGTTGCATGACATGATCAAAGTCCAGTTGAGGAAAAAAAGTT TGTTATGATTCTAAACGCCATACACCAAAACATCGTTTCCCGCCTATTTC AAAGTATAGCTTTTAGAAGTCCCCTAATTTAACAACACCCAACTAGAATC CGGGGGTAAAATGGAGCATACGGTTTTCTAAATAACCACCATAAGGGGCC GTAACTAATAACAAATACTACTTAATTTCAGTTTGACTAAGATTGCATTA ATTTTGATCAAAAATGATGGTAATTTATTTTGAAGAACATTTTCAAATTA AGATATTTGTGAAACTGTCAACACCCCCGTCATTGAAAATGGGTAATCCG ACCGATTGTTTTTACCAATTTATTATCAAGCAGTATCTTTCTGCTTTTGT CTATCAAGAAATGATGACTTAAAATGAGATAATTAGAAAGAAAGCTAAAA ATCAAAGAGATCTATCAGTTTGACATATTTTGAAGACGGGGGTCATTGAT AAATTCATCAACAAACATGTTATGCAAAACTCGGGAAAAGAGATCAATTG CAAAAAACTACGTTTTGGGGGCCAAAATCAGGTTATTTCACTCATGGAAA GGATATGAAAAATTGTATTTTTCAGTTTTCGAAACTAAAAACCAAGGAAA AATGTCGTGGTTCGTCATTTAGTAGCTACCCCCTAACTCAATTTAAATCC AATCATGGAAAGAAGAGATCAAACTTGTAGAATCAAAATTGATTTAATCT CAAACCATCCCTGTATTGTCCTTTATTTTATACAAAACAATTCGCATTTT TTTCTCTTATTATAACGAACTTGAGCAGCACATCGTCAAGTACTCGCCTC GATTGGTTATCAATTTCTCTCCAGAGAAAAAAATTCTGCAAAAACTTCTA CATTTTTCATCGTAAAACTCACACATCAAGATGCAAGCCGTCAAATCGAA ATTAGCTTCATTGAAAGCTAAATTGAAGGAATCCGAAGATGCAGCTAATG ATGCCGAAGCTGAACTCAACGAGATCAAAGAAAAAACAGAAGAAATGGAA ACTTTGGTAAGAAATTTCGTTTCATCTTTTGAAAATTTATTTATTCAAAC GAATATTTTTTGAGTCTGCAAATTAAATAGATTTATTTAAATTAACTTCA TAGCCGCGCTAGAGGACGTTAGTGATTTAAAAAGCCCTTGCTCGATTCCA TTATTATTGACCACTGTCATTTTCACTCTCTCTCTGAATATATAAGATTC AAAATATCAGATCACAACGCTTGTGGGTGGTGTGAATGCACCTTTATGTC CCTTCCCAGTCGAAAATCTGAAATATATCAGTCAGGGGTACGCACAGTGC AAGCCACAGGACAAATCAGAGTGCAGATTTAGAGACAGGGGTGTTTGTTT AGTTGTTTCCTTCAAATGCATAACACACATCTTTTGTCCTTTTGTAAAGA AATTCATCTGAATTGAAGTCATTACTGAAGGCCCTTACAGGAATGCGATG CCTAATAACAAATATGACATATAAGATTTTTTTACTTATTACTCCCAAAG CTATTAATAATGGTAAAATTGTGATATTTATCCTTATCTTTTCTGGTCAG AAGTCAGAATGAGGCAACGAAACGTAATTATTAGAATCTTTTGAGGTAAA CCATACCACAGACATGCTATTGCATAAAATAACTAAAACTTTGCTGTTTT GTAAACCCTTTGTAACATTATTACAAAAATCGTTTAGCTTAATATATAGA CGAAAAGATTACGAAGACAATATAAATTGCCTTAAAATATAATTTTTCTA TGTTGAAGGTATTCAGAAAACAGACTTAATTTTAACGTATGTGTTCTCCT AAGTCTTCTAAACAGCATTTTTCTTTTTTGCATAATTAGCTTTAATTGAA GAGATGAAGCTCTTGTATAAAATATAATTAATGTTGAAGGTATTCACTTG TTCATTGCTAAGAGAAACAGACTTTCTTAACATATGTGTTCTCCTAAGTC TTCTAGCAGCATATTTTTCCTTTTTTGCATAATTAGCTTTAATTGAAGGG ATAATGCATTTACTGTCGCTTAAATTTAATTAGCTCTAATGATTTTGGTT TAAAGATGCCAATTATCGATTATAAATGACAATTCTTTGTGTTGTAATAC CTTTGCTATTATCATTTTTTCTTTACTAACTTATTTTTCCTAAATATGGT TGGAAATAAGGGGGTCATCCTCAGATTATCAATAATAGGGTTTAACTCAC TAACATTTACGATCTCAAATTTTTAGACAATTTTTTATACGGTAGTAAAA TATATTATGATACATACAAGAGATTATACAAAACAAAGGAAATATTGACT ATGAAAAATCATCATATTTGACAAGCTGAATTAAATCATTATGTCTCCTC ATGATGCTAATCCATTTTCTCTCCTCCGCTGGGGTTTGGGACAATAGCCA GATTACTATACTTGACAAAATATTTCAAGTGCGATGGAGAGTGCTAAATA CAGTATATGATAGTAAAATCGGTTTAAAATCTTTATAAATGACAGAAATA TAATAACCGTGTCCGTCATACTAAGCTATTATGAAAAAAGAGTCAACGAT TAAATAAAAGAGTAGTGGAGCCCTATATAACACAAAATGTAAGGAATTTA AAGCTTTTCTACTGTGCTTTAAAAAAATACGAATTAGATTGATTAAGACT AAAAGATAATGTGAAATCTCTCATCTGTATTATGTAAACTAGCAGGTGCC ATCACGAGGTAAATCTTTTTGTCACAGTAAATTATTGAGATCATAGATAT ACCTTGATTAAATTGTCTGCATGTCGAATCCAAAGAGATAATACTAAAAC GAAATCATGAACCTTGAAAATTTTACACGCTTTTTTTATAAGAATATACT TTGATATATGATGAAAATGGCCAAAAAATTAAGAGTATGCTAAGAATATC ACCATCATGGAATCAGGCAACAAACCCTAAAAATGTCACTTCAAGAACAA TTTTTTTAACTTTTGAATTACCAATTATTCCAAAGTAAGGTTTAATACTT TCACAAAAATGCCATTTTTATGCTTCAGATGTTTATTTCTTGTTAAATTT AGTTTGAATTTCGATTCTAACATAAGAATACCGTACGAATATTTTAGGAT GATTTTTCCCAAAAAGTTAAGAATCCAGGATGAAATGAAAAGCACCATTC TTATAAAAAAAGCGTGCAATGGAGACTTATTTGGGGTTGAGTCCTATTTC GTATGTTATTGCCCAGGCTTGGTTTTTAACCATGGTCGTACCTATGTGGA TATTTTAGTGGCAAACAGTTTATCTTACACCCCTGTCTCACAGCCGCGGT GGAACTTTTACCGAGTTTATGTATCGGAGGATATCGAGGGCGACGGTAAG TGAAATCGATACAAAACAAAGTCGATAGTTGATGTACGGCTCTATATCGC CTTTGCTCACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTGTTTTTACCGTCGTCGAGCAAAGTGGACGGT GATTTTGGAGACATGTCAACTTTGCTTTATACCGTCCCCCTCGATTTATC TCGAATACATAAACTCGCTATTTTCCTCAGTGGGGATAAGAGTTCCTATT GAAATCCCAATGGAGATAACAATTCTATTGCTCCAATGTTAATAAATCCA GTGGAAATGATTTTGGAGTGCATTTTTTAAACATTGAATTTTAAGGTCAA TTTTCCAGTGGGCTGAAATTCTAGGGTATTTTCCCATCGGGGACGAAATT TTTTCTAGTGGGGCTGGGGTCCCAGCGGATCCGTGACACAGGCGTGTTAT CTTGAAAACACAATTCGAAATTTCAACAAGCTCGCCATTTCCAGACTTCT TTAGTTTAATGTCCAGTTTATACGACACTCTTCAATCGTCAGCGCAAGCC AGTATGACTTTTCTCTAAATCCAATTCCTTCGTCTACATACCAAAGAACG ATAAATAGAATTTACCTCTAAAAAAACCACCCAAGCACGTAACTCGTTTT AGCGCTCAGACAAGAATAATGACGTTATGGACTTATGATGGATGCTGGTA TATATAGGGCCTTGCCAGGTATAACCTTGTTTCACTGAGATCCTTTTTCC TAGTTGATAGTTAAAGGAAAACGAAAAACTGAAAGGCGATTGCCTAAAAT GTTAAATTCGATGCAAAACTCATTGAAACTTTCGATCCCATTGGGAAAGT CACTGGTGATTTTGTAATGGATTCCGTGATTTTGTAATGGATTTTTCGGA AGGGAGGGATTCCATCGGTTTAGTGACCTTGGAAAAAAATGAGAGATTGC CCCGTTGGCTGTTTTTAATTTTTTATTTGTCATTTTACAAGAATAAACTG TTAATATCTTTTGCTTTTATTTACCTTTAGGGAGCTGATCTCTCGACCAA GTTAGGTGAAATTGAGGATAAACTCGACGAAGCAGAATCACAATTAAACG AACTCACTGCCAATGTAGCAGAAAACGAAAAAACATCCGACGAAACAGAT CAAGCAAAAAAGATTATGGAAAACAGAGGTCGAAATGATGCTAGCAAAAT TGAAGAACTCGAACGAGAATTAGAAACATTGAACGAAATGATCAAAGAAA ATGAAGGGGAATATGAAGAGGACTTGACATTAGGTTCGTATACAGTTTTC TATTCTCAAAATGCAAAGAAGGAGATTTTGGCAAAAATCTTTTGAAATTT TAACAAATATTTACTAAAGAGTGGGGGGTGTTGAAGACATGATGCAAAAT AAAATAATTTTGGGTTAATCAGATTGGGCCTTCTTTGAAATGTGGAAGCA TTTGTGCGTCAGTCAGAAGTTTTGGTACAGCATCTTTCACCAGCGCTCAT AGATACTTCTGTTTTCTGTTTCCCAATAATGGACTTGCCTTTTCCATAGT TATCATGAAAATTCCTTATCAAATCTTGTCATATTCATTTCGCTACTTCA TTTTTATCTAGTAACCGAGCTTGAAGAACAATTAGACGAAGCAGAAGAAC GACACGAGTCCGCTGATGCCAAACTGAAAGAACTCGATTCTCAATATATA TTGATCGGAAACAGTCATAAAAGTATGGTGACGAACGAAGATGCAGCTGC CGATCGTGTAAGCCAAGCTGATTCAAAAATCTCTGAAATGGTTAGCCAAG TCGACGAAAAAGAAGAATTGGCAACCGCTATGGAAGCACAATGGAAAGAA CTTGAAGACGAAATGGATAAACTTGCGATGGAGGAAGAAGAATCAAAATT AACGTTCGAGAAAAAACAAGAAGAACTTCAACTGGCTCTTGCAGAAATTA ACGATTTGTAAACATTTGTTTTTTTTAGTCAACTCTAGATAATATCTTTG CATACGCTTCCCCTATTTCCTTGGGTACTCAGCATTGAATTTTCTACAAA TTCAAAGATTAGATACCCTAACTCATGGTGTACGCGAAACTTTACTTTTC ATTTTTCCTCATTTTTATAAAAATAATTTTGTAAATTTTTTGATACCTTA TTTTTCTCTTTTTGTATGTATTTATTGTATGAAAATTTAAGACTCCCGTT TTTTTTGTATTATCATTTTTGACCGCACCTGTAAAATAGCAACTTTTTCG TTTAAACCAGACAAAGAATAGGAAAATTCAAATATTAATATTTCTTTTCT GTCATAATCTTCAACAGACTTAGCGCCACCGGTAGCATCGTCTTGTACGG TTAAAAAATTTTAACACCCTCTTGAATACTTGAAATCATGCGTTGAATTC GGGCTCGTGACAAAACTTTCAGATTTACGGCATGTCGGTGAAGTTAATCG AGCACGCTGGGGAGACAACACAATTCAAAAGAGAACACAATTTGCTGTAA GAAGTGCTAGACCATGTATGAGCAACATCGAGGGACTCAATGTTATCATT ATCTACTCCTGACATTAGACAAACATTGCTCTAAGACAACTCATTTTAAA GACTTTTAGACGAAATCTCGAAAATGGAAAGACTAGCCTTATCTTAGACT TTCTCTTAAATATTCATCTTCCTATTTTCAAAGGGTTTAAAACTATGCCA CAATAACTGAAGGTACTGTAACTGTTTTTCTCAAATAGTTTATTTTCAAT TACTTTCAGAGGTTTACCCTGTACGCAGAAGAATTAT

Coding sequence (CDS) from alignment at sc0000005:1354866..1363302-

>TCONS_00000881 ID=TCONS_00000881|Name=TCONS_00000881|organism=Clytia hemisphaerica|type=CDS|length=2187bp|location=Sequence derived from alignment at sc0000005:1354866..1363302- (Clytia hemisphaerica)
TAACCGAGCTTGAAGAACAATTAGACGAAGCAGAAGAACGACACGAGTCC
GCTGATGCCAAACTGAAAGAACTCGATTCTCAATATATATTGATCGGAAA
CAGTCATAAAAGTATGGTGACGAACGAAGATGCAGCTGCCGATCGTGTAA
GCCAAGCTGATTCAAAAATCTCTGAAATGGTTAGCCAAGTCGACGAAAAA
GAAGAATTGGCAACCGCTATGGAAGCACAATGGAAAGAACTTGAAGACGA
AATGGATAAACTTGCGATGGAGGAAGAAGAATCAAAATTAACGTTCGAGA
AAAAACAAGAAGAACTTCAACTGGCTCTTGCAGAAATTAACGATTTGTAA
GGAGCTGATCTCTCGACCAAGTTAGGTGAAATTGAGGATAAACTCGACGA
AGCAGAATCACAATTAAACGAACTCACTGCCAATGTAGCAGAAAACGAAA
AAACATCCGACGAAACAGATCAAGCAAAAAAGATTATGGAAAACAGAGGT
CGAAATGATGCTAGCAAAATTGAAGAACTCGAACGAGAATTAGAAACATT
GAACGAAATGATCAAAGAAAATGAAGGGGAATATGAAGAGGACTTGACAT
TAGATGCAAGCCGTCAAATCGAAATTAGCTTCATTGAAAGCTAAATTGAA
GGAATCCGAAGATGCAGCTAATGATGCCGAAGCTGAACTCAACGAGATCA
AAGAAAAAACAGAAGAAATGGAAACTTTGTAACCGAGCTTGAAGAACAAT
TAGACGAAGCAGAAGAACGACACGAGTCCGCTGATGCCAAACTGAAAGAA
CTCGATTCTCAATATATATTGATCGGAAACAGTCATAAAAGTATGGTGAC
GAACGAAGATGCAGCTGCCGATCGTGTAAGCCAAGCTGATTCAAAAATCT
CTGAAATGGTTAGCCAAGTCGACGAAAAAGAAGAATTGGCAACCGCTATG
GAAGCACAATGGAAAGAACTTGAAGACGAAATGGATAAACTTGCGATGGA
GGAAGAAGAATCAAAATTAACGTTCGAGAAAAAACAAGAAGAACTTCAAC
TGGCTCTTGCAGAAATTAACGATTTGTAAGGAGCTGATCTCTCGACCAAG
TTAGGTGAAATTGAGGATAAACTCGACGAAGCAGAATCACAATTAAACGA
ACTCACTGCCAATGTAGCAGAAAACGAAAAAACATCCGACGAAACAGATC
AAGCAAAAAAGATTATGGAAAACAGAGGTCGAAATGATGCTAGCAAAATT
GAAGAACTCGAACGAGAATTAGAAACATTGAACGAAATGATCAAAGAAAA
TGAAGGGGAATATGAAGAGGACTTGACATTAGATGCAAGCCGTCAAATCG
AAATTAGCTTCATTGAAAGCTAAATTGAAGGAATCCGAAGATGCAGCTAA
TGATGCCGAAGCTGAACTCAACGAGATCAAAGAAAAAACAGAAGAAATGG
AAACTTTGTAACCGAGCTTGAAGAACAATTAGACGAAGCAGAAGAACGAC
ACGAGTCCGCTGATGCCAAACTGAAAGAACTCGATTCTCAATATATATTG
ATCGGAAACAGTCATAAAAGTATGGTGACGAACGAAGATGCAGCTGCCGA
TCGTGTAAGCCAAGCTGATTCAAAAATCTCTGAAATGGTTAGCCAAGTCG
ACGAAAAAGAAGAATTGGCAACCGCTATGGAAGCACAATGGAAAGAACTT
GAAGACGAAATGGATAAACTTGCGATGGAGGAAGAAGAATCAAAATTAAC
GTTCGAGAAAAAACAAGAAGAACTTCAACTGGCTCTTGCAGAAATTAACG
ATTTGTAAGGAGCTGATCTCTCGACCAAGTTAGGTGAAATTGAGGATAAA
CTCGACGAAGCAGAATCACAATTAAACGAACTCACTGCCAATGTAGCAGA
AAACGAAAAAACATCCGACGAAACAGATCAAGCAAAAAAGATTATGGAAA
ACAGAGGTCGAAATGATGCTAGCAAAATTGAAGAACTCGAACGAGAATTA
GAAACATTGAACGAAATGATCAAAGAAAATGAAGGGGAATATGAAGAGGA
CTTGACATTAGATGCAAGCCGTCAAATCGAAATTAGCTTCATTGAAAGCT
AAATTGAAGGAATCCGAAGATGCAGCTAATGATGCCGAAGCTGAACTCAA
CGAGATCAAAGAAAAAACAGAAGAAATGGAAACTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000520XLOC_000520Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000881-proteinTCONS_00000881-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000881-exon-sc0000005-1575043694:1363173..1363302TCONS_00000881-exon-sc0000005-1575043694:1363173..1363302Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1575043694:1360097..1360324TCONS_00000881-exon-sc0000005-1575043694:1360097..1360324Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1575043694:1356370..1356622TCONS_00000881-exon-sc0000005-1575043694:1356370..1356622Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1575043694:1354866..1356041TCONS_00000881-exon-sc0000005-1575043694:1354866..1356041Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1510915933:1363173..1363302TCONS_00000881-exon-sc0000005-1510915933:1363173..1363302Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1510915933:1360097..1360324TCONS_00000881-exon-sc0000005-1510915933:1360097..1360324Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1510915933:1356370..1356622TCONS_00000881-exon-sc0000005-1510915933:1356370..1356622Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1510915933:1354866..1356041TCONS_00000881-exon-sc0000005-1510915933:1354866..1356041Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1491911889:1363173..1363302TCONS_00000881-exon-sc0000005-1491911889:1363173..1363302Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1491911889:1360097..1360324TCONS_00000881-exon-sc0000005-1491911889:1360097..1360324Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1491911889:1356370..1356622TCONS_00000881-exon-sc0000005-1491911889:1356370..1356622Clytia hemisphaericaexon
TCONS_00000881-exon-sc0000005-1491911889:1354866..1356041TCONS_00000881-exon-sc0000005-1491911889:1354866..1356041Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:1354866..1363302 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.224827 0.591953 0.407298 0.398477 32.6484 24.5761 324.222 335.877 95.93 102.698 25.2408 30.2337 440.74 437.796 0.702154 0.236662 327.996 428.131 759.731 606.748 658.634 605.186 336.358 375.242 298.659 343.489 218.698 146.067 1.87156 0.173459
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000533Tropomyosin
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000881 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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