Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00000881-protein ID=TCONS_00000881-protein|Name=TCONS_00000881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
MQAVKSKLASLKAKLKESEDAANDAEAELNEIKEKTEEMETLGADLSTKL
GEIEDKLDEAESQLNELTANVAENEKTSDETDQAKKIMENRGRNDASKIE
ELERELETLNEMIKENEGEYEEDLTLVTELEEQLDEAEERHESADAKLKE
LDSQYILIGNSHKSMVTNEDAAADRVSQADSKISEMVSQVDEKEELATAM
EAQWKELEDEMDKLAMEEEESKLTFEKKQEELQLALAEINDL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000533 | Tropomyosin |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 225..242 |
| None | No IPR available | COILS | Coil | Coil | coord: 85..154 |
| None | No IPR available | COILS | Coil | Coil | coord: 183..217 |
| None | No IPR available | COILS | Coil | Coil | coord: 1..77 |
| None | No IPR available | GENE3D | 1.20.5.730 | | coord: 87..156
e-value: 1.1E-4
score: 21.7
coord: 162..240
e-value: 0.0014
score: 18.2 |
| None | No IPR available | GENE3D | 1.20.5.340 | | coord: 1..80
e-value: 6.7E-8
score: 32.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 67..100 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..40 |
| None | No IPR available | SUPERFAMILY | 57997 | Tropomyosin | coord: 2..241 |
| IPR000533 | Tropomyosin | PRINTS | PR00194 | TROPOMYOSIN | coord: 103..131
score: 22.2
coord: 78..98
score: 35.46
coord: 133..156
score: 35.6
coord: 189..214
score: 30.77
coord: 42..59
score: 25.73 |
| IPR000533 | Tropomyosin | PFAM | PF00261 | Tropomyosin | coord: 7..241
e-value: 1.8E-23
score: 83.0 |
Blast
The following BLAST results are available for this feature:
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