TCONS_00000881-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000881-protein
Unique NameTCONS_00000881-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length242

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000881-protein ID=TCONS_00000881-protein|Name=TCONS_00000881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
MQAVKSKLASLKAKLKESEDAANDAEAELNEIKEKTEEMETLGADLSTKL
GEIEDKLDEAESQLNELTANVAENEKTSDETDQAKKIMENRGRNDASKIE
ELERELETLNEMIKENEGEYEEDLTLVTELEEQLDEAEERHESADAKLKE
LDSQYILIGNSHKSMVTNEDAAADRVSQADSKISEMVSQVDEKEELATAM
EAQWKELEDEMDKLAMEEEESKLTFEKKQEELQLALAEINDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000520XLOC_000520Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000881TCONS_00000881Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000533Tropomyosin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..242
NoneNo IPR availableCOILSCoilCoilcoord: 85..154
NoneNo IPR availableCOILSCoilCoilcoord: 183..217
NoneNo IPR availableCOILSCoilCoilcoord: 1..77
NoneNo IPR availableGENE3D1.20.5.730coord: 87..156
e-value: 1.1E-4
score: 21.7
coord: 162..240
e-value: 0.0014
score: 18.2
NoneNo IPR availableGENE3D1.20.5.340coord: 1..80
e-value: 6.7E-8
score: 32.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 2..241
IPR000533TropomyosinPRINTSPR00194TROPOMYOSINcoord: 103..131
score: 22.2
coord: 78..98
score: 35.46
coord: 133..156
score: 35.6
coord: 189..214
score: 30.77
coord: 42..59
score: 25.73
IPR000533TropomyosinPFAMPF00261Tropomyosincoord: 7..241
e-value: 1.8E-23
score: 83.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000881-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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