TCONS_00000257 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000257
Unique NameTCONS_00000257
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3980

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000257 ID=TCONS_00000257|Name=TCONS_00000257|organism=Clytia hemisphaerica|type=transcript|length=3980bp
caGAAAATAGAAAACTGATGTTTATATAAAATGGTTGTGATGGCGGTGAA
CAATCGGTATTGTAGTGACTGTTTAGAATCAGGGGAATTTCTACCCCTGA
GACTTGTCATGATGAATTTGGATAGCGGTCTTTGGATGTGTCCCAAAGAT
GATtgtACATTTCCCTTATCTTCTCCATCCATGCAGTTATACATGGAAGA
AGATTTGACCACTGAACGTGTTTTGCTGTTGACAGGAAACAAAAGTAAAC
AATTAGAGagaCCACCAACTCCAGACTCACTAGTAGCAAGTATTTCATCA
AACAAACAAAGTGACATGTTACAACAAACACAATATGCAGTAAGTACTAC
TTCATCAAGTGGAAGTCGAAAACGTAAACATTCAGATGGTGGCTCATCAA
GCAGATCAACCAAAACAAATAGTTTTCGCAGTGTCAGCAATTCAAACATT
ACAGATCCAATATCGTCAGATTCTTCGAGCTTGATGGCTAACAAAAAGTA
TCCTTCAGTACCTCTATGGGAAAATGAAGAACTGCTGTGCTGGCTGGATT
CAATGCTTGCACTCATAGTCTTGAACCAAACTTTACAGAATTATCCTGAA
GAGTCCAAAGGTACCCTAAATAAATTACTCAGCGAATACAAACATAATAC
TGATATTTACAATGTGACAAAAGACTATGAAACAATAAGAGCAAGCATGC
ACACTTTACGGAAATCGACACTCAACTTCATTCAACCAAAGATGTTATCC
AGCTTCACCGAGGAGGATTCTCCTCTCTTGTCTCTACAGCTTTTAATGAA
AACCAATGCTGAGCTTTATGAAGATTGCGAAGTGGAATACTCGAGTAAAT
TCACTTGTAACCAATGTCAATTCGAAAAAACTGATGGGTTCAAGAAAACC
ATACTGACTCTCCCAGAAGGATATCCAGATTTGAATTTCGTAGAGAATTT
ATACTACAAAAGGAATTGTTACAAATGCAATGCACCAGAGCAAAAGAACG
TTTTCTATATTGAGAAataTCCAGCTGCGTTGTTTGTGTACTGCAGTACA
GGGGTAGGTTGTCGAAAATACTGGAATTGGTTCAACTTCACATCGCCGGC
TGGAGACAATTATATTGTGACGCAAATTGTCCAATACTCTAGAAAGAAGC
ACCACTTCATTTTGTGGAGTTACTCTTACAAAGATAAATTATGGATAGAA
GCTGATGATTTAAAACACCCAGTGGTCCAGTATCAACATGAACGACCCAA
ATGTCGGTCTCATGAGGTCCACTTCATGGTCCTGGAGAAAGTTTCAACAC
TTGAGGAAGcgataaagaaaaatgaacagAAAAATCTTAGCTCCGAGCAA
ACTGGATCCGAAAGCGCACCCGTGACCCCTGAATCCCTGGAATCACCGCT
TTGCTCTGGAAATAGTAGTGTTATTGTACAATACTCTGGGCAATCGAGTC
GCAAAACCTCGCTTTGTAGCAGTGATGGTATTTTACCGAACGGAAGATTA
TCGAATGATAGCGACCGCCCAATTGAAGGGCGTAAGGACAGTGGCGAACT
TCCAAATGATCAACTTCGAAAGAAATCCTTGTTGCACGTACCTTATTACA
AGCCGTTTACAGCACGTTCAAAGCAANCAGTACCAAGTAAGTGAGTAAGT
AAGTTGTCTGTGTGTTTGATAAAGGGTACAATATGAAAGGGGTAAGGGTT
ATTAGGGGAGAATTTTTGTGTAGGGGGGTTCAGCATGGGGCGCTTGTTAT
GCATAACTGAGGGGTTTCTTTACCAGTGCAGCCCTAGGAGAGAATAATAG
GACTGCTCTACTATTATTGTGTTACTTTAATTATCTGGATTTTCACGTTC
GATAGAATTCATCTGTTGTTTTGGTTTCCCTTCTTTTCTACTTTCTCATT
TATACTGCCAGGGAATAATATTTGCTCTTATTGTTGTTCTTTAGATAAAT
TATGGATAGAAGCTGATGATTTAAAACACCCAGTGGTCCAGTATCAACAT
GAACGACCCACATGTCGGTCTCATGAGGTCCACTTCATGGTCCTGGAGAA
AGTTTCAACACTTGAGGAAGcgataaagaaaaatgaacagAAAAATCTTA
GCTCCGAGCAAACTGGATCCGAAAGCGCACCCGTGACCCCTGAATCCCTG
GAATCACCGCTTTGCTCTGGTAATAGTAGTGTTATTGTACAATACTCTGG
GCAATCGAGTCGCAAAACCTCGCTTTGTAGCAGTGATGGTATTTTACCGA
ACGGAAGATTATTGAATGATAGCGACCGCCCAAGCGAAGGGCGTAAGGAT
AATCGCGATCTTCCAGATGATCAACTTCGAAAGAAATCCTTGTTGCACGT
ACCTTATTACAAGCCGTTTACAGCACGTTCAAAGCGTACAGCTAGAGAAA
GTCCTACAAATTACAACCAGAATGCAACATCTTCTCATCTTAAATCTGAA
AGCAGTAGCATGTCGCACAGTACACCAGCAAAACAGACTGTTCTAAACAA
CCCTGACATTTTACAACAAACCACTAAAACATCAGACATAAAGGCGGATC
CTACGAACGCGATTTTCAGTCAAGCTTTAGCTAACGAACTCGGTGATTTT
TATTCGGATCTTTTAGACCAACAATCTATGGACACTACCCAAGAAGATGG
CATGTTTGATTCGACACAAATTTCCCAGGGAACTATTCCTAACCAAATGT
CGTCTGATCAATTCAGCTCTACCACCCAAAACCAACAGCAAGACTCTACA
ATCGACGTTCAACAAACTCTAGAACGTCGATTTAGTAACGATGTTGATTC
GTTGAGTGATATAGTTGATATAGGTACTGCAATCGCCGGAGGTTCTTTTT
CAAGTACCGTATCTAACGATAAAACTGGATTTAAAGATTATGGAAACCCT
TTGAAAAGACTTATGGAGGAAGAGGAAGATATCAAAGGAGTTTTCCAAGC
TTCTTCTGTCAATTTACAGATGTTTAATAAGACTGAAACGAATGATACCT
CTTCAAGTGGGTCGCATGTAACACCAATGGATATAAATACTGATTTTGGT
GAAATTAAGTCACCAACCGAGGACGAACCCAAGGTCGATTTTGCAATCAC
CATGTCGACGAACAGTTATTCTGGAGCGTATTCGGACGTCAAACTGTCTG
ACGAGGAATTAGAAGAAATTTTAAACGGGTGATGAGTTAAGAATTGAATC
GAATATCTACCGGTAACACAGTTATGTGTGTATGTCACGTGTATAATAAA
TCGCATAAACTGGTCGCTCTTTGTTTGAACGGGAACTGGAAGAGATTAAT
TCTGATTTCGACTCAGAAATTTACTGTAGAGAGTCTCAAAACAGAATGAG
AATCAATATGACATAAATAGTAGAGGTAAAGGTATAGCGttctacagtat
gtggcccccaaaacgtcaatcaaatttgaaatgtctctcaaatctagagg
aaaaaaggttttacaaaaatttttgctgcatgaaaagctttaacatctct
actttatttcctggaagttctttttcaaaattttcaatttcaacaatatt
tttaaatcgcttaaagatagcttttttctaatggccccaaaaacggaggt
ttgcaattttagcgacttctcgagatatctttaagatatgaatacaaaat
tttgaccatagttttgaaatgtgatttagagggttttgggcataaatttg
tttgataaaatttttacagtatacccctggttgtcaaaacggtggtttgg
ggcccccaaaacgtaggtgtagttaaaattaaattattaagcctagtggt
aatagggggaactatgaacatatttgtgttttcccttaaatttacgaccc
gatggatgtaaaatttatgatttttataaagtatttcaagattttcgatg
atgcaaagtccaaactgaaaatttagaaattttcaaaatgacaattttga
tttacaacgtcttaatcaagtttctgaaaa
Run BLAST on NCBI

transcript from alignment at sc0000001:2445250..2452430-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000257 ID=TCONS_00000257|Name=TCONS_00000257|organism=Clytia hemisphaerica|type=transcript|length=7181bp|location=Sequence derived from alignment at sc0000001:2445250..2452430- (Clytia hemisphaerica)
CAGAAAATAGAAAACTGATGTTTATATAAAATGGTTGTGATGGCGGTGAA
CAATCGGTATTGTAGTGACTGTTTAGAATCAGGGGAATTTCTACCCCTGA
GACTTGTCATGATGAATTTGGATAGCGGTCTTTGGATGTGTCCCAAAGAT
GATGTAAGATTATATTAATTTTTCTCAATTCGGTATTGTAGTGACTGTTT
AGAATCAGGGGAATTTTTACCCCTGAGACTTGTTATGATGAATTTGGATA
GCAGTCTTTGGATGTGTCAGAAAGAGAATGTAAGATTATCTTAATTTTTC
TCGATTCCTTAATTTAGGTGTTATGTCTATACCCTTTTCAGTTTGCATGA
TGCACCAATAAAATAATTGATATAATCCTAGTATGTTGGTATACCTGCCA
TTATTTTTGAGAGTGTGAATAATTTGTGAATTTTTTTTTTCATTTCAGTG
TACATTTCCCTTATCTTCTCCATCCATGCAGTTATACATGGAAGAAGATT
TGACCACTGAACGTGTTTTGCTGTTGACAGGAAACAAAAGTAAACAATTA
GAGGTTAGTAGAATTTGATTGAAACAAAAGTCATTCAAAAACCAAAAAAA
ACAAAGATAAAAGTAAAAAATTTGTAGTGTCATTATGTCGTATCAGACAT
CACAACAATTCAAACACAGCTAAAATAGAACAAAAACGGAACAAAAACAA
AGACTCAAAAAATCTGCCTTTCATTTAAGATTCTTTAAGAAATTAGTTTT
AGTTTTTTGAGCGATGACTCTTTTGATCGTTTTGGTGTCCCAGACCTTAC
ATTATCTTTTTTTATTTTCCAGAGACCACCAACTCCAGACTCACTAGTAG
CAAGTATTTCATCAAACAAACAAAGTGACATGTTACAACAAACACAATAT
GCAGTAAGTACTACTTCATCAAGTGGAAGTCGAAAACGTAAACATTCAGA
TGGTGGCTCATCAAGCAGATCAACCAAAACAAATAGTTTTCGCAGTGTCA
GCAATTCAAACATTACAGATCCAATATCGTCAGATTCTTCGAGCTTGATG
GCTAACAAAAAGTATCCTTCAGTACCTCTATGGGAAAATGAAGAACTGCT
GTGCTGGCTGGATTCAATGCTTGCACTCATAGTCTTGAACCAAACTTTAC
AGAATTATCCTGAAGAGTCCAAAGGTACCCTAAATAAATTACTCAGCGAA
TACAAACATAATACTGATATTTACAATGTGACAAAAGACTATGAAACAAT
AAGAGCAAGCATGCACACTTTACGGAAATCGACACTCAACTTCATTCAAC
CAAAGATGTTATCCAGCTTCACCGAGGAGGATTCTCCTCTCTTGTCTCTA
CAGCTTTTAATGAAAACCAATGCTGAGCTTTATGAAGATTGCGAAGTGGA
ATACTCGAGTAAATTCACTTGTAACCAATGTCAATTCGAAAAAACTGATG
GGTAAGAAATCATCCCTACGTCTTCTTATTTTTGCTAAAATCTTTTATTT
GAGCACTGGTCGATTGTATAGGTTTAATCTGGGTATTGTGGTTTAAACAT
AATTCGATGAATATTCAGTTTTGATGGTTATTATTTCTTTTTGATTTTTT
ACTAGGTTCAAGAAAACCATACTGACTCTCCCAGAAGGATATCCAGATTT
GAATTTCGTAGAGAATTTATACTACAAAAGGAATTGTTACAAATGCAATG
CACCAGAGCAAAAGAACGTTTTCTATATTGAGAAGTAAGTACTTACTTTT
CATCAAAGTTATTCACAAATCAAACCTCTAATAATAGCTAACGCGTATAC
TCATGTGACAGACCAGGGCAGACAGTGAAATGTACAGGGTTCGAATTAAC
GTATCGCGTTTCGCAATTCGTGATGCGTTTTTGTACGAAGCAAAAATTTA
AAAACTCACCAAAATCGCAATACAACCTATATAAAAATTTTTACAGCTCA
CTAAGTCAGTTTTATTAAATGAGCGTCCAAGCAAATAGAACTGTTATTTG
GCTTATAAATTAGTTTGGAGAGTGGAAAATGCATTGTATATTTATAAAAA
CGCATCGTGAACTATCTAAAATATTTCGCCCCTGCAGCGCACAGATTTAA
CTTACTTTGTTCACTAAAAGGTGCCATTCACTTTTAAATCGTCAAATTCA
ATCCCTGAATGTATATTTAGGACAAAATTACACCTTTCAATTTACCAGGA
AAATCGAGCGTCCAAGATAACAAATTTTTTTTTTACATAATATTTGGTCA
CTTCTCCATAAAATTATTCTCTTGCCAAAAATATTGTAATGTCAGTTGTT
AACTTTTGGTTACTTACTCTGACTTTTTTCCCTGATTTGATGCTTTATCA
TGACGTGCTAATAATCTCTAATCAAACCTCATTTAACCTTCTCTAAGGAA
GGACATGGATAATGCAAAGTAATTCATTCATGTAATTCCTTTTCAAATTT
TAGATATCCAGCTGCGTTGTTTGTGTACTGCAGTACAGGGGTAGGTTGTC
GAAAATACTGGAATTGGTTCAACTTCACATCGCCGGCTGGAGACAATTAT
ATTGTGACGCAAATTGTCCAATACTCTAGAAAGAAGCACCACTTCATTTT
GTGGAGTTACTCTTACAAAGGTAGGTGTTTAAACTGTGTTTTAATTCAAT
ATTCCCAGCATTCAAGATTACTGACAGTAATATTCAAGGCAAAATTGAGT
AAAATTGCTTTGGTGCTTGGTGCATCTTCACCAATGCTCTTTAATATTCT
GTCCGAAACCTTGAACTTGCTTGTTTTGTCCTGGTACTACCATTGCTTTT
GAAAAAAACTTTCTTGTAGAAGTCAAGCTAAGCATAAGTGTGCAAAACCT
GACTTCTTGAGAAAGGGGACTTCCAGTCTTTTAAAAATAGGATGCAAGCT
GCTATTAAACCAGTTAGCTGTTTTTTTGCATCCTATGAAAACACAAAGAC
AACATTCTACTGTCAAAACTAGAACAGTACTTTTTAAATGTGCTGATTCG
AAGAAAACCCAGAGCTGAAAAAATTGTTTTCTTCTTGAAACAAATCTTCA
CAGAAAAAAGTACTGTAAATATTTTTGAGAATAATTAACCTTCGGTTCCG
AAATTTTCTGAGACTTTGTTTTCTGTATATATAGACTAGAGAAAATTTTC
AAATTTCAAAAAATAGTTATCCCAACAGATTCAAAAACTTTAAAATAAAA
AAGATTAGTATTGTGAAATCGATAACTTTAGTAAAATGTTGTAAAGGCGC
GCGATATTGGGAAAAGTTTTCACCTTCTAAACGATTTGTTTATCGTTTCA
AAAAACGGTTAGTATACTTAATTTTTACAAAATCGATTTTGCTTCGATCT
TTTATCGAATATTTCTCGATTTTTCCTCGATTTTTCATTCGATACTTTTT
ATTGAAATATAGTCAAGCCTTGAATATTTGGGATTTTGTTTTCACTTCGT
TCTCTCAAGATGAACAGGTTAGCCATTCCATTCCATTATTGGCGAAGTTG
AAATACAACATTCAAATTTTCTATATTTGGCTATATTTAGCTGTAAAGTT
CAACTTGTACACTCTTTTAATCCTGACTCTTCCCTTTATCTTATAGGTTG
ATGTTATAAACAAAGTTAACATAAAATATCTAGAAAGTTTTATGATAAAT
ACTTTCTCCCCTTTTAAGACCCCATTACTTAACATGGGTTCTTAAAAGTG
AAAGTGTTTTCAGGCTAAAGTCGTAAGTATAAAGGCCATGAATCTTTCCG
GCGTGATATTTTTCTAGCTTTTCAGCTTTTAGACGATGATTCTTTTGCAG
TATAACTTTTCATCGAATCTCCTTCATTTCGCCGTTTTTTGTTTCATTCT
TCAATCAATGTTTCTACTTTATGCGTTCTCTCTTCTTACATCGCGAAAAG
TCCTTTTCCAACTACCCATATCCTTTTCAAAACTACTATATATTTGATCG
CTGAGTGATTTCACTGAAGATTGCCATCCTAGATGGCATCAAACTTTGAG
TATGAAATTAACTTATAAATCGTTTTTTTTTACTCAAACTAGTATATTTG
AGCACTGTGTTATTTAGACAGTACCAAGTAAGTGAGTAAGTAAGTTGTCT
GTGTGTTTGATAAAGGGTACAATATGAAAGGGGTAAGGGTTATTAGGGGA
GAATTTTTGTGTAGGGGGGTTCAGCATGGGGCGCTTGTTATGCATAACTG
AGGGGTTTCTTACCAGTGCAGCCCTAGGGGAGAATAATAGGACTGCTCTA
CTATTATTGTGTTACTTTAATTATCTGGATTTTCACGTTCGATAGAATTC
ATCTGTTGTTTTGGTTTCCCTTCTTTTCTACTTTCTCATTTATACTGCCA
GGGAATAATATTTGCTCTTATTGTTGTTCTTTAGATAAATTATGGATAGA
AGCTGATGATTTAAAACACCCAGTGGTCCAGTATCAACATGAACGACCCA
AATGTCGGTCTCATGAGGTCCACTTCATGGTCCTGGAGAAAGTTTCAACA
CTTGAGGAAGCGATAAAGAAAAATGAACAGAAAAATCTTAGCTCCGAGCA
AACTGGATCCGAAAGCGCACCCGTGACCCCTGAATCCCTGGAATCACCGC
TTTGCTCTGGAAATAGTAGTGTTATTGTACAATACTCTGGGCAATCGAGT
CGCAAAACCTCGCTTTGTAGCAGTGATGGTATTTTACCGAACGGAAGATT
ATCGAATGATAGCGACCGCCCAATTGAAGGGCGTAAGGACAGTGGCGAAC
TTCCAAATGATCAACTTCGAAAGAAATCCTTGTTGCACGTACCTTATTAC
AAGCCGTTTACAGCACGTTCAAAGCAANCAGTACCAAGTAAGTGAGTAAG
TAAGTTGTCTGTGTGTTTGATAAAGGGTACAATATGAAAGGGGTAAGGGT
TATTAGGGGAGAATTTTTGTGTAGGGGGGTTCAGCATGGGGCGCTTGTTA
TGCATAACTGAGGGGTTTCTTTACCAGTGCAGCCCTAGGAGAGAATAATA
GGACTGCTCTACTATTATTGTGTTACTTTAATTATCTGGATTTTCACGTT
CGATAGAATTCATCTGTTGTTTTGGTTTCCCTTCTTTTCTACTTTCTCAT
TTATACTGCCAGGGAATAATATTTGCTCTTATTGTTGTTCTTTAGATAAA
TTATGGATAGAAGCTGATGATTTAAAACACCCAGTGGTCCAGTATCAACA
TGAACGACCCACATGTCGGTCTCATGAGGTCCACTTCATGGTCCTGGAGA
AAGTTTCAACACTTGAGGAAGCGATAAAGAAAAATGAACAGAAAAATCTT
AGCTCCGAGCAAACTGGATCCGAAAGCGCACCCGTGACCCCTGAATCCCT
GGAATCACCGCTTTGCTCTGGTAATAGTAGTGTTATTGTACAATACTCTG
GGCAATCGAGTCGCAAAACCTCGCTTTGTAGCAGTGATGGTATTTTACCG
AACGGAAGATTATTGAATGATAGCGACCGCCCAAGCGAAGGGCGTAAGGA
TAATCGCGATCTTCCAGATGATCAACTTCGAAAGAAATCCTTGTTGCACG
TACCTTATTACAAGCCGTTTACAGCACGTTCAAAGCGTACAGCTAGAGAA
AGTCCTACAAATTACAACCAGAATGCAACATCTTCTCATCTTAAATCTGA
AAGCAGTAGCATGTCGCACAGTACACCAGCAAAACAGACTGTTCTAAACA
ACCCTGACATTTTACAACAAACCACTAAAACATCAGACATAAAGGCGGAT
CCTACGAACGCGATTTTCAGTCAAGCTTTAGCTAACGAACTCGGTGATTT
TTATTCGGATCTTTTAGACCAACAATCTATGGACACTACCCAAGAAGATG
GCATGTTTGATTCGACACAAATTTCCCAGGGAACTATTCCTAACCAAATG
TCGTCTGATCAATTCAGCTCTACCACCCAAAACCAACAGCAAGACTCTAC
AATCGACGTTCAACAAACTCTAGAACGTCGATTTAGTAACGATGTTGATT
CGTTGAGTGATATAGTTGATATAGGTACTGCAATCGCCGGAGGTTCTTTT
TCAAGTACCGTATCTAACGATAAAACTGGATTTAAAGATTATGGAAACCC
TTTGAAAAGACTTATGGAGGAAGAGGAAGATATCAAAGGAGTTTTCCAAG
CTTCTTCTGTCAATTTACAGATGTTTAATAAGACTGAAACGAATGATACC
TCTTCAAGTGGGTCGCATGTAACACCAATGGATATAAATACTGATTTTGG
TGAAATTAAGTCACCAACCGAGGACGAACCCAAGGTCGATTTTGCAATCA
CCATGTCGACGAACAGTTATTCTGGAGCGTATTCGGACGTCAAACTGTCT
GACGAGGAATTAGAAGAAATTTTAAACGGGTGATGAGTTAAGAATTGAAT
CGAATATCTACCGGTAACACAGTTATGTGTGTATGTCACGTGTATAATAA
ATCGCATAAACTGGTCGCTCTTTGTTTGAACGGGAACTGGAAGAGATTAA
TTCTGATTTCGACTCAGAAATTTACTGTAGAGAGTCTCAAAACAGAATGA
GAATCAATATGACATAAATAGTAGAGGTAAAGGTATAGCGTTCTACAGTA
TGTGGCCCCCAAAACGTCAATCAAATTTGAAATGTCTCTCAAATCTAGAG
GAAAAAAGGTTTTACAAAAATTTTTGCTGCATGAAAAGCTTTAACATCTC
TACTTTATTTCCTGGAAGTTCTTTTTCAAAATTTTCAATTTCAACAATAT
TTTTAAATCGCTTAAAGATAGCTTTTTTCTAATGGCCCCAAAAACGGAGG
TTTGCAATTTTAGCGACTTCTCGAGATATCTTTAAGATATGAATACAAAA
TTTTGACCATAGTTTTGAAATGTGATTTAGAGGGTTTTGGGCATAAATTT
GTTTGATAAAATTTTTACAGTATACCCCTGGTTGTCAAAACGGTGGTTTG
GGGCCCCCAAAACGTAGGTGTAGTTAAAATTAAATTATTAAGCCTAGTGG
TAATAGGGGGAACTATGAACATATTTGTGTTTTCCCTTAAATTTACGACC
CGATGGATGTAAAATTTATGATTTTTATAAAGTATTTCAAGATTTTCGAT
GATGCAAAGTCCAAACTGAAAATTTAGAAATTTTCAAAATGACAATTTTG
ATTTACAACGTCTTAATCAAGTTTCTGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000139XLOC_000139Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000257-exon-sc0000001-1575043694:2452278..2452430TCONS_00000257-exon-sc0000001-1575043694:2452278..2452430Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1575043694:2451878..2451982TCONS_00000257-exon-sc0000001-1575043694:2451878..2451982Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1575043694:2450980..2451608TCONS_00000257-exon-sc0000001-1575043694:2450980..2451608Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1575043694:2450697..2450825TCONS_00000257-exon-sc0000001-1575043694:2450697..2450825Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1575043694:2449811..2449977TCONS_00000257-exon-sc0000001-1575043694:2449811..2449977Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1575043694:2445250..2448046TCONS_00000257-exon-sc0000001-1575043694:2445250..2448046Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1510915933:2452278..2452430TCONS_00000257-exon-sc0000001-1510915933:2452278..2452430Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1510915933:2451878..2451982TCONS_00000257-exon-sc0000001-1510915933:2451878..2451982Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1510915933:2450980..2451608TCONS_00000257-exon-sc0000001-1510915933:2450980..2451608Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1510915933:2450697..2450825TCONS_00000257-exon-sc0000001-1510915933:2450697..2450825Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1510915933:2449811..2449977TCONS_00000257-exon-sc0000001-1510915933:2449811..2449977Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1510915933:2445250..2448046TCONS_00000257-exon-sc0000001-1510915933:2445250..2448046Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1491911889:2452278..2452430TCONS_00000257-exon-sc0000001-1491911889:2452278..2452430Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1491911889:2451878..2451982TCONS_00000257-exon-sc0000001-1491911889:2451878..2451982Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1491911889:2450980..2451608TCONS_00000257-exon-sc0000001-1491911889:2450980..2451608Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1491911889:2450697..2450825TCONS_00000257-exon-sc0000001-1491911889:2450697..2450825Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1491911889:2449811..2449977TCONS_00000257-exon-sc0000001-1491911889:2449811..2449977Clytia hemisphaericaexon
TCONS_00000257-exon-sc0000001-1491911889:2445250..2448046TCONS_00000257-exon-sc0000001-1491911889:2445250..2448046Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2445250..2452430 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.88182	1.17923	0.364532	0.361704	14.2718	10.9447	7.47192	9.57404	6.42081	8.17733	8.78269	5.25694	8.44606	9.13289	4.15853	5.32187	9.73897	10.0107	5.40498	3.8355	2.5315	3.72899	2.27825	3.2239	7.71334	5.73775	2.23989	1.40176	2.82701	3.35887
Blast
[Close]
BLAST of TCONS_00000257 vs. Swiss-Prot (Human)
Match: USPL1 (SUMO-specific isopeptidase USPL1 OS=Homo sapiens GN=USPL1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.508e-18
Identity = 74/306 (24.18%), Postives = 143/306 (46.73%), Query Frame = 1 
Query:  517 WENEELLCWLDSMLALIVLNQTLQNYP----EESKGTLNKLLSEYKH-NTDIYN--------------VTKDYETIRASMHTLRKSTLNFIQPKMLSSFTEEDSPLLSLQLLMKTNAELYEDCEVEYSSKFTCNQCQFEKTDGFKKTILTLPEGYPDLNFVENLYYKRNCYKCNAPEQKNVFYIEKYPAALFVYCSTGVGCRKYWNW-FNFTSPAGDNYIVTQIVQYSRKKHHFILWSYSYKDKLWIEADDLKHPVVQYQHERPKCRSHEVHFMVLEK----VSTLEEAI----KKNEQKNLSSEQ 1350
            W+N   LCWLD +L+ +V ++ L+N       + +    +LL++Y   NT +Y                ++ +  I   ++ +R      +QP++  +  + +SP+ +  LL+K    + +     +S  F C+QC  +  +   K+++T     P+ + +   ++   C  CN+  Q     +EK      ++   G+      ++ F+F    G  Y +T ++QY R  +HFI W     D  W+E DDLK P  + +H++ +  + E+H ++ E+    V+  E A     K N+Q  LS+E+
Sbjct:  229 WKNAYALCWLDCILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTSQLSGVKDGDCKKLTSEIFAEIETCLNEVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLETHIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGP-CNNCNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHF---EGCLYQITSVIQY-RANNHFITWILD-ADGSWLECDDLKGPCSE-RHKKFEVPASEIHIVIWERKISQVTDKEAACLPLKKTNDQHALSNEK 527
The following BLAST results are available for this feature:
BLAST of TCONS_00000257 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
USPL17.508e-1824.18SUMO-specific isopeptidase USPL1 OS=Homo sapiens G... [more]
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