TCONS_00000214 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000214
Unique NameTCONS_00000214
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1386

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000214 ID=TCONS_00000214|Name=TCONS_00000214|organism=Clytia hemisphaerica|type=transcript|length=1386bp
GGTTCTATGACTCATTTAAGGAACCTAGCTGTCTCAAGATTTCACATTCC
ACATTTCCATTTCCACATTATCTTTTTAAAGGTGAAAACCAAATAATCCT
ATCTGACTAATtaataaaatttatgaaaaagtgtagaaattgataatatt
ttagagaaaaataatgaaataatgcTGTCAACAGTCTTGAATAAAGGCAT
TTTAGTGTCCACTCTTCATGCATCCAATCAAAAGCAATTGCTGAAGCCAT
CTGAGTTGGATATTTATTATGAGCCAGAGCCAACAATACCAGCTGAGCGA
CCATCACCTACACCAGAATTCCTTTATGAATACATTCACGTAGGAAGAGA
GAGTTTAACTAACGTCTTTTCTGGACTATTGACCACCCATGAAAAGATTT
CTGACTTTTATGCTACAACGAAAGAAAGAATTTCAAGTAGTTACAACCGA
ACATTAGAAGATCCATATTTTCTGTTCTCACCTGCAGCAATTGTAGCTGC
AACTGCTACTGGAGCTGTCGTTGCTGGAAAAGGAAGAAGACCCATCAAAA
GGTCATTGTATGGATTACTCTTTGGAACAACAGCTGCTGCTATATCTTAC
CCCGAGCGAACACTTGACATTGCTGAGACGAGTTATTATCATACCGCTTC
TTCCATTGCTCAACTCTTTGCACCAAGTGCACCAACAACCACAGAGCGTG
TTGTCGAAATTTTAGATGATAAAAACGAGCCTGATGAAGTAGTAGAATCT
GAAATTGTGATATCAGAGGCTGTTACCTCTACCGAGGAAGAAGAAGTCAG
TGCTCCTGCAACTGAGGTAGTTGAGGAAATCATTTCTGTGATTGAAGATG
AAACTCAACCACCGCCTCCACCGCCGCTGCAAGAAGAAATTGTAACAGAA
CTGACTGAAGTTGTGGAATCTGAAGGTGGATCCGCTGAAGTTGTGCCTGA
TTCTGTTAATGATAACGTATCAAATGAAAGAAGTGAAGAAATAGTTGGCG
AGGAAAATACAGAGGTACCTGTGTCAAATAATGAGGTACAAGACTTTGAT
CCTGGACAAACTGAACTTCAAGAAATATCTGTCGTTTCATTAGATGATGA
AAAAGTTGTTGATGATAAAGATACTAGACTAGACTTAGATACGGCAGCTA
ATCAAGAAAATATAATTATTGAAGGTGATCTTGGACAATCTGATCCTGAA
GATTCTGATATGTATTCAACAAGATCTTGATATACGTAATTCTGATTGGA
cgagttttgtttttgtttttgattttttcttgctCTACTTTTTTTTAAGt
gtgaaaatttataattttattttttattttcaatatttttttttaattta
ttgaataattttattcaaacaaacaaaaaatgagaT
Run BLAST on NCBI

protein sequence of TCONS_00000214-protein

>TCONS_00000214-protein ID=TCONS_00000214-protein|Name=TCONS_00000214-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
MLSTVLNKGILVSTLHASNQKQLLKPSELDIYYEPEPTIPAERPSPTPEF
LYEYIHVGRESLTNVFSGLLTTHEKISDFYATTKERISSSYNRTLEDPYF
LFSPAAIVAATATGAVVAGKGRRPIKRSLYGLLFGTTAAAISYPERTLDI
AETSYYHTASSIAQLFAPSAPTTTERVVEILDDKNEPDEVVESEIVISEA
VTSTEEEEVSAPATEVVEEIISVIEDETQPPPPPPLQEEIVTELTEVVES
EGGSAEVVPDSVNDNVSNERSEEIVGEENTEVPVSNNEVQDFDPGQTELQ
EISVVSLDDEKVVDDKDTRLDLDTAANQENIIIEGDLGQSDPEDSDMYST
RS
Run BLAST on NCBI

transcript from alignment at sc0000001:1500623..1503990-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000214 ID=TCONS_00000214|Name=TCONS_00000214|organism=Clytia hemisphaerica|type=transcript|length=3368bp|location=Sequence derived from alignment at sc0000001:1500623..1503990- (Clytia hemisphaerica)
GGTTCTATGACTCATTTAAGGAACCTAGCTGTCTCAAGATTTCACATTCC
ACATTTCCATTTCCACATTATCTTTTTAAAGGTGAAAACCAAATAATCCT
ATCTGACTAATTAATAAAATTTATGAAAAAGTGTAGAAATTGATAATATT
TTAGAGAAAAATAATGAAATAATGCTGTCAACAGTCTTGAATAAAGGCAT
TTTAGTGTCCACTCTTCATGCATCCAATCAAAAGCAATTGCTGAAGCCAT
CTGAGGTAAGAAATATTCTTCAATACTATTTTGGTGCTTACAAGCTATTT
TTCATCAGATTTTCATGGGATGACTTAGAGTAGAGTTACTTTCCTTAAAA
AGTTCACTAGATGGGTAATTCCAGAAAATGGAATGTGGTAGTCTGACAGA
TGACTAAAAATCTATATCTATAGTCACAATTTCTTGTATGGAATATGCAT
TATAATAAAACAGAAATGTTTTAGGGTGTTTTATGTTCAGTAATTTAGAC
AAGAAAGCTTAGNTTAATAGGATTATAATAAAACAGAAATGTTTTAGAGA
GTTTTATGTTCAGTAATTTTAGACAAGAAAGCTTAGAGGAAGGGGTTTAA
TGGTTGATGGAGAAGTGAAATCTGGCCTTTTTTTGCTAGGGATAGCAGAA
TTTAGAAAGAATTAGAGTTTCAAAATTGGTATCAAATACTCAAAGTTTCC
ATCATTTTTGAAGAGAAGTTCCAATTTCTTTGTTTTTTCTTGGGGTTGAG
AACTGAATATGCTTTTTTGGCTTTCTTTAGTTGGATATTTATTATGAGCC
AGAGCCAACAATACCAGCTGAGCGACCATCACCTACACCAGAATTCCTTT
ATGAATACATTCACGTAGGAAGAGAGAGTTTAACTAACGTCTTTTCTGGA
CTATTGGTATTGATTTTTTATTATACTAACAATCTTATCCTAAACCACAT
TCAAAATGATGTTTTTCAGAACCTAGAACAGCTTTTATGGCAATATGAAC
CCTATCTTAGGCCAAATTCCTTTCCGTATCTGTATAGTGTAAATGTGTAT
AGATCGTCATTTTTTTTATTCCCAAAATNGGGCTAAATTCCTTTCCGTAT
CTGTATAGTGTAAAATGTGTATAGATCGTCATTTTTTTTATTCCCAAAAT
CTTACATATCAACATGAAGCTCTTTTTTAAATAACCAATGAGATTTTATC
TTTAATAGTTTTAATAATTTGTTCGAAGTGGAAAACATCTACTGTATTTC
ATAAGATGTTTTTGTTTTTGTCTCTCAGGCTCAAGCTATAGAGATCCCGT
TTAACATTTTTGTCTTTTCTCTTATAGACCACCCATGAAAAGATTTCTGA
CTTTTATGCTACAACGAAAGAAAGAATTTCAAGTGAGCATTGTACTTTTT
ATAAATTATAAAAAATCAAAGAATAGACCTTTTCATAAATTACGTCTCGA
ACATAACTTACCTCGTATTCAAACAATTACCATGGTGATTGTGTCCCTTA
TGCCCACGATTCTTTTATGAAAAGGTCACCATGGCAATAATTTCAGAACG
AGGCAAGTGATGTTCGTAACGTAATTTAAGGTCTATCTGAATAAATTTGA
ACTGTATTTGATTTCCTTTCTAAGATAGATCATGACTATCGAGCTCAGTG
TAAAAAATACAGTGATAAAATTTTCTTCTTTTCTCTTCCAGGTAGTTACA
ACCGAACATTAGAAGATCCATATTTTCTGTTCTCACCTGCAGCAATTGTA
GCTGCAACTGCTACTGGAGCTGTCGTTGCTGGAAAAGGAAGTAAGTCACG
CTTGAAGATATAATGATTATAATCATCTCATTTTATAAGATTACTCTACT
GTAAGTGATTAAAGAACTGATAGATTTTCACTAAGATCTTCTAGATTTCT
AGATTTGTCTAGGACCTCAAATTTTAACTTTAGCTAGAGCGTGTTCCATA
AATACTTTCTTCTTCAAAGAAAAGATTCTATTGTTTTAGTCGATCGTTTT
AGCATAGTGTGCAGAGGGGTCCAGCCTCCAGCATTTTTCAGGGGGGGGGG
GCTAAGGAAAATAGCCCGCAGCTAAATTCCAGAAACATTCATTCATTCCC
ACCTTCACAAGGCAAAATATCCAAGAAATTTTGCATGCAAATTCTCGATA
AATTATTTTAAATTTTTTTTTTAAGAGGGATAAAATCTTCCCCACAGCAT
ATAGATTTTTAACATAATTTAAAATATCTTCAACCTATCAGTTCTGCCCC
AGTTCTATTACACAGCACTCAGCCCCCCTAGCAAGCTAGCCCCCAGTATT
TTTTGAAAAATACAGCCCCCAATCAAGTTAAAATGGTTTAGCCCCCCCCC
TAAGCTCAGGGGGGGGGTGCATTCTATGAATTTAGAGATAATCTTTTTTA
CAGGATGCTTCAAATAACGGAAACATATGTTTTGTGTTCTTCTTATAGGA
AGACCCATCAAAAGGTCATTGTATGGATTACTCTTTGGAACAACAGCTGC
TGCTATATCTTACCCCGAGCGAACACTTGACATTGCTGAGACGAGTTATT
ATCATACCGCTTCTTCCATTGCTCAACTCTTTGCACCAAGTGCACCAACA
ACCACAGAGCGTGTTGTCGAAATTTTAGATGATAAAAACGAGCCTGATGA
AGTAGTAGAATCTGAAATTGTGATATCAGAGGCTGTTACCTCTACCGAGG
AAGAAGAAGTCAGTGCTCCTGCAACTGAGGTAGTTGAGGAAATCATTTCT
GTGATTGAAGATGAAACTCAACCACCGCCTCCACCGCCGCTGCAAGAAGA
AATTGTAACAGAACTGACTGAAGTTGTGGANTCACCGCCTCCGCCGCCGA
CGCCGACGCCACAAGAAGAAGTTGTAGCAGAACTGACTGAGGTTGTGGAA
TCTGAAGGTGGATCCGCTGAAGTTGTGCCTGATTCTGTTAATGATAACGT
ATCAAATGAAAGAAGTGAAGAAATAGTTGGCGAGGAAAATACAGAGGTAC
CTGTGTCAAATAATGAGGTACAAGACTTTGATCCTGGACAAACTGAACTT
CAAGAAATATCTGTCGTTTCATTAGATGATGAAAAAGTTGTTGATGATAA
AGATACTAGACTAGACTTAGATACGGCAGCTAATCAAGAAAATATAATTA
TTGAAGGTGATCTTGGACAATCTGATCCTGAAGATTCTGATATGTATTCA
ACAAGATCTTGATATACGTAATTCTGATTGGACGAGTTTTGTTTTTGTTT
TTGATTTTTTCTTGCTCTACTTTTTTTTAAGTGTGAAAATTTATAATTTT
ATTTTTTATTTTCAATATTTTTTTTTAATTTATTGAATAATTTTATTCAA
ACAAACAAAAAATGAGAT

Coding sequence (CDS) from alignment at sc0000001:1500623..1503990-

>TCONS_00000214 ID=TCONS_00000214|Name=TCONS_00000214|organism=Clytia hemisphaerica|type=CDS|length=6354bp|location=Sequence derived from alignment at sc0000001:1500623..1503990- (Clytia hemisphaerica)
GTTGTGGAATCTGAAGGTGGATCCGCTGAAGTTGTGCCTGATTCTGTTAA
TGATAACGTATCAAATGAAAGAAGTGAAGAAATAGTTGGCGAGGAAAATA
CAGAGGTACCTGTGTCAAATAATGAGGTACAAGACTTTGATCCTGGACAA
ACTGAACTTCAAGAAATATCTGTCGTTTCATTAGATGATGAAAAAGTTGT
TGATGATAAAGATACTAGACTAGACTTAGATACGGCAGCTAATCAAGAAA
ATATAATTATTGAAGGTGATCTTGGACAATCTGATCCTGAAGATTCTGAT
ATGTATTCAACAAGATCTTGAGAAGACCCATCAAAAGGTCATTGTATGGA
TTACTCTTTGGAACAACAGCTGCTGCTATATCTTACCCCGAGCGAACACT
TGACATTGCTGAGACGAGTTATTATCATACCGCTTCTTCCATTGCTCAAC
TCTTTGCACCAAGTGCACCAACAACCACAGAGCGTGTTGTCGAAATTTTA
GATGATAAAAACGAGCCTGATGAAGTAGTAGAATCTGAAATTGTGATATC
AGAGGCTGTTACCTCTACCGAGGAAGAAGAAGTCAGTGCTCCTGCAACTG
AGGTAGTTGAGGAAATCATTTCTGTGATTGAAGATGAAACTCAACCACCG
CCTCCACCGCCGCTGCAAGAAGAAATTGTAACAGAACTGACTGAAGTAGT
TACAACCGAACATTAGAAGATCCATATTTTCTGTTCTCACCTGCAGCAAT
TGTAGCTGCAACTGCTACTGGAGCTGTCGTTGCTGGAAAAGGAAACCACC
CATGAAAAGATTTCTGACTTTTATGCTACAACGAAAGAAAGAATTTCAAT
TGGATATTTATTATGAGCCAGAGCCAACAATACCAGCTGAGCGACCATCA
CCTACACCAGAATTCCTTTATGAATACATTCACGTAGGAAGAGAGAGTTT
AACTAACGTCTTTTCTGGACTATTGATGCTGTCAACAGTCTTGAATAAAG
GCATTTTAGTGTCCACTCTTCATGCATCCAATCAAAAGCAATTGCTGAAG
CCATCTGAGGTTGTGGAATCTGAAGGTGGATCCGCTGAAGTTGTGCCTGA
TTCTGTTAATGATAACGTATCAAATGAAAGAAGTGAAGAAATAGTTGGCG
AGGAAAATACAGAGGTACCTGTGTCAAATAATGAGGTACAAGACTTTGAT
CCTGGACAAACTGAACTTCAAGAAATATCTGTCGTTTCATTAGATGATGA
AAAAGTTGTTGATGATAAAGATACTAGACTAGACTTAGATACGGCAGCTA
ATCAAGAAAATATAATTATTGAAGGTGATCTTGGACAATCTGATCCTGAA
GATTCTGATATGTATTCAACAAGATCTTGAGAAGACCCATCAAAAGGTCA
TTGTATGGATTACTCTTTGGAACAACAGCTGCTGCTATATCTTACCCCGA
GCGAACACTTGACATTGCTGAGACGAGTTATTATCATACCGCTTCTTCCA
TTGCTCAACTCTTTGCACCAAGTGCACCAACAACCACAGAGCGTGTTGTC
GAAATTTTAGATGATAAAAACGAGCCTGATGAAGTAGTAGAATCTGAAAT
TGTGATATCAGAGGCTGTTACCTCTACCGAGGAAGAAGAAGTCAGTGCTC
CTGCAACTGAGGTAGTTGAGGAAATCATTTCTGTGATTGAAGATGAAACT
CAACCACCGCCTCCACCGCCGCTGCAAGAAGAAATTGTAACAGAACTGAC
TGAAGTAGTTACAACCGAACATTAGAAGATCCATATTTTCTGTTCTCACC
TGCAGCAATTGTAGCTGCAACTGCTACTGGAGCTGTCGTTGCTGGAAAAG
GAAACCACCCATGAAAAGATTTCTGACTTTTATGCTACAACGAAAGAAAG
AATTTCAATTGGATATTTATTATGAGCCAGAGCCAACAATACCAGCTGAG
CGACCATCACCTACACCAGAATTCCTTTATGAATACATTCACGTAGGAAG
AGAGAGTTTAACTAACGTCTTTTCTGGACTATTGATGCTGTCAACAGTCT
TGAATAAAGGCATTTTAGTGTCCACTCTTCATGCATCCAATCAAAAGCAA
TTGCTGAAGCCATCTGAGGTTGTGGAATCTGAAGGTGGATCCGCTGAAGT
TGTGCCTGATTCTGTTAATGATAACGTATCAAATGAAAGAAGTGAAGAAA
TAGTTGGCGAGGAAAATACAGAGGTACCTGTGTCAAATAATGAGGTACAA
GACTTTGATCCTGGACAAACTGAACTTCAAGAAATATCTGTCGTTTCATT
AGATGATGAAAAAGTTGTTGATGATAAAGATACTAGACTAGACTTAGATA
CGGCAGCTAATCAAGAAAATATAATTATTGAAGGTGATCTTGGACAATCT
GATCCTGAAGATTCTGATATGTATTCAACAAGATCTTGAGAAGACCCATC
AAAAGGTCATTGTATGGATTACTCTTTGGAACAACAGCTGCTGCTATATC
TTACCCCGAGCGAACACTTGACATTGCTGAGACGAGTTATTATCATACCG
CTTCTTCCATTGCTCAACTCTTTGCACCAAGTGCACCAACAACCACAGAG
CGTGTTGTCGAAATTTTAGATGATAAAAACGAGCCTGATGAAGTAGTAGA
ATCTGAAATTGTGATATCAGAGGCTGTTACCTCTACCGAGGAAGAAGAAG
TCAGTGCTCCTGCAACTGAGGTAGTTGAGGAAATCATTTCTGTGATTGAA
GATGAAACTCAACCACCGCCTCCACCGCCGCTGCAAGAAGAAATTGTAAC
AGAACTGACTGAAGTAGTTACAACCGAACATTAGAAGATCCATATTTTCT
GTTCTCACCTGCAGCAATTGTAGCTGCAACTGCTACTGGAGCTGTCGTTG
CTGGAAAAGGAAACCACCCATGAAAAGATTTCTGACTTTTATGCTACAAC
GAAAGAAAGAATTTCAATTGGATATTTATTATGAGCCAGAGCCAACAATA
CCAGCTGAGCGACCATCACCTACACCAGAATTCCTTTATGAATACATTCA
CGTAGGAAGAGAGAGTTTAACTAACGTCTTTTCTGGACTATTGATGCTGT
CAACAGTCTTGAATAAAGGCATTTTAGTGTCCACTCTTCATGCATCCAAT
CAAAAGCAATTGCTGAAGCCATCTGAGGTTGTGGAATCTGAAGGTGGATC
CGCTGAAGTTGTGCCTGATTCTGTTAATGATAACGTATCAAATGAAAGAA
GTGAAGAAATAGTTGGCGAGGAAAATACAGAGGTACCTGTGTCAAATAAT
GAGGTACAAGACTTTGATCCTGGACAAACTGAACTTCAAGAAATATCTGT
CGTTTCATTAGATGATGAAAAAGTTGTTGATGATAAAGATACTAGACTAG
ACTTAGATACGGCAGCTAATCAAGAAAATATAATTATTGAAGGTGATCTT
GGACAATCTGATCCTGAAGATTCTGATATGTATTCAACAAGATCTTGAGA
AGACCCATCAAAAGGTCATTGTATGGATTACTCTTTGGAACAACAGCTGC
TGCTATATCTTACCCCGAGCGAACACTTGACATTGCTGAGACGAGTTATT
ATCATACCGCTTCTTCCATTGCTCAACTCTTTGCACCAAGTGCACCAACA
ACCACAGAGCGTGTTGTCGAAATTTTAGATGATAAAAACGAGCCTGATGA
AGTAGTAGAATCTGAAATTGTGATATCAGAGGCTGTTACCTCTACCGAGG
AAGAAGAAGTCAGTGCTCCTGCAACTGAGGTAGTTGAGGAAATCATTTCT
GTGATTGAAGATGAAACTCAACCACCGCCTCCACCGCCGCTGCAAGAAGA
AATTGTAACAGAACTGACTGAAGTAGTTACAACCGAACATTAGAAGATCC
ATATTTTCTGTTCTCACCTGCAGCAATTGTAGCTGCAACTGCTACTGGAG
CTGTCGTTGCTGGAAAAGGAAACCACCCATGAAAAGATTTCTGACTTTTA
TGCTACAACGAAAGAAAGAATTTCAATTGGATATTTATTATGAGCCAGAG
CCAACAATACCAGCTGAGCGACCATCACCTACACCAGAATTCCTTTATGA
ATACATTCACGTAGGAAGAGAGAGTTTAACTAACGTCTTTTCTGGACTAT
TGATGCTGTCAACAGTCTTGAATAAAGGCATTTTAGTGTCCACTCTTCAT
GCATCCAATCAAAAGCAATTGCTGAAGCCATCTGAGGTTGTGGAATCTGA
AGGTGGATCCGCTGAAGTTGTGCCTGATTCTGTTAATGATAACGTATCAA
ATGAAAGAAGTGAAGAAATAGTTGGCGAGGAAAATACAGAGGTACCTGTG
TCAAATAATGAGGTACAAGACTTTGATCCTGGACAAACTGAACTTCAAGA
AATATCTGTCGTTTCATTAGATGATGAAAAAGTTGTTGATGATAAAGATA
CTAGACTAGACTTAGATACGGCAGCTAATCAAGAAAATATAATTATTGAA
GGTGATCTTGGACAATCTGATCCTGAAGATTCTGATATGTATTCAACAAG
ATCTTGAGAAGACCCATCAAAAGGTCATTGTATGGATTACTCTTTGGAAC
AACAGCTGCTGCTATATCTTACCCCGAGCGAACACTTGACATTGCTGAGA
CGAGTTATTATCATACCGCTTCTTCCATTGCTCAACTCTTTGCACCAAGT
GCACCAACAACCACAGAGCGTGTTGTCGAAATTTTAGATGATAAAAACGA
GCCTGATGAAGTAGTAGAATCTGAAATTGTGATATCAGAGGCTGTTACCT
CTACCGAGGAAGAAGAAGTCAGTGCTCCTGCAACTGAGGTAGTTGAGGAA
ATCATTTCTGTGATTGAAGATGAAACTCAACCACCGCCTCCACCGCCGCT
GCAAGAAGAAATTGTAACAGAACTGACTGAAGTAGTTACAACCGAACATT
AGAAGATCCATATTTTCTGTTCTCACCTGCAGCAATTGTAGCTGCAACTG
CTACTGGAGCTGTCGTTGCTGGAAAAGGAAACCACCCATGAAAAGATTTC
TGACTTTTATGCTACAACGAAAGAAAGAATTTCAATTGGATATTTATTAT
GAGCCAGAGCCAACAATACCAGCTGAGCGACCATCACCTACACCAGAATT
CCTTTATGAATACATTCACGTAGGAAGAGAGAGTTTAACTAACGTCTTTT
CTGGACTATTGATGCTGTCAACAGTCTTGAATAAAGGCATTTTAGTGTCC
ACTCTTCATGCATCCAATCAAAAGCAATTGCTGAAGCCATCTGAGGTTGT
GGAATCTGAAGGTGGATCCGCTGAAGTTGTGCCTGATTCTGTTAATGATA
ACGTATCAAATGAAAGAAGTGAAGAAATAGTTGGCGAGGAAAATACAGAG
GTACCTGTGTCAAATAATGAGGTACAAGACTTTGATCCTGGACAAACTGA
ACTTCAAGAAATATCTGTCGTTTCATTAGATGATGAAAAAGTTGTTGATG
ATAAAGATACTAGACTAGACTTAGATACGGCAGCTAATCAAGAAAATATA
ATTATTGAAGGTGATCTTGGACAATCTGATCCTGAAGATTCTGATATGTA
TTCAACAAGATCTTGAGAAGACCCATCAAAAGGTCATTGTATGGATTACT
CTTTGGAACAACAGCTGCTGCTATATCTTACCCCGAGCGAACACTTGACA
TTGCTGAGACGAGTTATTATCATACCGCTTCTTCCATTGCTCAACTCTTT
GCACCAAGTGCACCAACAACCACAGAGCGTGTTGTCGAAATTTTAGATGA
TAAAAACGAGCCTGATGAAGTAGTAGAATCTGAAATTGTGATATCAGAGG
CTGTTACCTCTACCGAGGAAGAAGAAGTCAGTGCTCCTGCAACTGAGGTA
GTTGAGGAAATCATTTCTGTGATTGAAGATGAAACTCAACCACCGCCTCC
ACCGCCGCTGCAAGAAGAAATTGTAACAGAACTGACTGAAGTAGTTACAA
CCGAACATTAGAAGATCCATATTTTCTGTTCTCACCTGCAGCAATTGTAG
CTGCAACTGCTACTGGAGCTGTCGTTGCTGGAAAAGGAAACCACCCATGA
AAAGATTTCTGACTTTTATGCTACAACGAAAGAAAGAATTTCAATTGGAT
ATTTATTATGAGCCAGAGCCAACAATACCAGCTGAGCGACCATCACCTAC
ACCAGAATTCCTTTATGAATACATTCACGTAGGAAGAGAGAGTTTAACTA
ACGTCTTTTCTGGACTATTGATGCTGTCAACAGTCTTGAATAAAGGCATT
TTAGTGTCCACTCTTCATGCATCCAATCAAAAGCAATTGCTGAAGCCATC
TGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000117XLOC_000117Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000214-proteinTCONS_00000214-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000214-exon-sc0000001-1575043694:1503736..1503990TCONS_00000214-exon-sc0000001-1575043694:1503736..1503990Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1575043694:1503085..1503210TCONS_00000214-exon-sc0000001-1575043694:1503085..1503210Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1575043694:1502609..1502663TCONS_00000214-exon-sc0000001-1575043694:1502609..1502663Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1575043694:1502201..1502299TCONS_00000214-exon-sc0000001-1575043694:1502201..1502299Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1575043694:1501169..1501542TCONS_00000214-exon-sc0000001-1575043694:1501169..1501542Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1575043694:1500623..1501099TCONS_00000214-exon-sc0000001-1575043694:1500623..1501099Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1510915933:1503736..1503990TCONS_00000214-exon-sc0000001-1510915933:1503736..1503990Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1510915933:1503085..1503210TCONS_00000214-exon-sc0000001-1510915933:1503085..1503210Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1510915933:1502609..1502663TCONS_00000214-exon-sc0000001-1510915933:1502609..1502663Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1510915933:1502201..1502299TCONS_00000214-exon-sc0000001-1510915933:1502201..1502299Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1510915933:1501169..1501542TCONS_00000214-exon-sc0000001-1510915933:1501169..1501542Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1510915933:1500623..1501099TCONS_00000214-exon-sc0000001-1510915933:1500623..1501099Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1491911889:1503736..1503990TCONS_00000214-exon-sc0000001-1491911889:1503736..1503990Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1491911889:1503085..1503210TCONS_00000214-exon-sc0000001-1491911889:1503085..1503210Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1491911889:1502609..1502663TCONS_00000214-exon-sc0000001-1491911889:1502609..1502663Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1491911889:1502201..1502299TCONS_00000214-exon-sc0000001-1491911889:1502201..1502299Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1491911889:1501169..1501542TCONS_00000214-exon-sc0000001-1491911889:1501169..1501542Clytia hemisphaericaexon
TCONS_00000214-exon-sc0000001-1491911889:1500623..1501099TCONS_00000214-exon-sc0000001-1491911889:1500623..1501099Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1500623..1503990 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
60.9325	58.4833	46.7477	47.1278	30.591	24.0765	45.2402	47.6437	42.2141	49.5493	39.0517	36.9514	23.9562	23.4882	27.0521	27.6299	73.884	71.4771	25.1982	27.2493	37.295	36.67	63.0361	54.9884	40.2189	42.7469	54.5587	41.9365	47.9739	45.7917
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019166MIC26/MIC27
IPR009080tRNAsynth_Ia_anticodon-bd
Vocabulary: Biological Process
TermDefinition
GO:0042407cristae formation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Cellular Component
TermDefinition
GO:0061617MICOS complex
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042407 cristae formation
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0061617 MICOS complex
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top