XLOC_000117 (gene) - C. hemisphaerica

Overview
NameXLOC_000117
Unique NameXLOC_000117
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:1500623..1503990-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000117 ID=XLOC_000117|Name=XLOC_000117|organism=Clytia hemisphaerica|type=gene|length=3368bp|location=Sequence derived from alignment at sc0000001:1500623..1503990- (Clytia hemisphaerica)
GGTTCTATGACTCATTTAAGGAACCTAGCTGTCTCAAGATTTCACATTCC
ACATTTCCATTTCCACATTATCTTTTTAAAGGTGAAAACCAAATAATCCT
ATCTGACTAATTAATAAAATTTATGAAAAAGTGTAGAAATTGATAATATT
TTAGAGAAAAATAATGAAATAATGCTGTCAACAGTCTTGAATAAAGGCAT
TTTAGTGTCCACTCTTCATGCATCCAATCAAAAGCAATTGCTGAAGCCAT
CTGAGGTAAGAAATATTCTTCAATACTATTTTGGTGCTTACAAGCTATTT
TTCATCAGATTTTCATGGGATGACTTAGAGTAGAGTTACTTTCCTTAAAA
AGTTCACTAGATGGGTAATTCCAGAAAATGGAATGTGGTAGTCTGACAGA
TGACTAAAAATCTATATCTATAGTCACAATTTCTTGTATGGAATATGCAT
TATAATAAAACAGAAATGTTTTAGGGTGTTTTATGTTCAGTAATTTAGAC
AAGAAAGCTTAGNTTAATAGGATTATAATAAAACAGAAATGTTTTAGAGA
GTTTTATGTTCAGTAATTTTAGACAAGAAAGCTTAGAGGAAGGGGTTTAA
TGGTTGATGGAGAAGTGAAATCTGGCCTTTTTTTGCTAGGGATAGCAGAA
TTTAGAAAGAATTAGAGTTTCAAAATTGGTATCAAATACTCAAAGTTTCC
ATCATTTTTGAAGAGAAGTTCCAATTTCTTTGTTTTTTCTTGGGGTTGAG
AACTGAATATGCTTTTTTGGCTTTCTTTAGTTGGATATTTATTATGAGCC
AGAGCCAACAATACCAGCTGAGCGACCATCACCTACACCAGAATTCCTTT
ATGAATACATTCACGTAGGAAGAGAGAGTTTAACTAACGTCTTTTCTGGA
CTATTGGTATTGATTTTTTATTATACTAACAATCTTATCCTAAACCACAT
TCAAAATGATGTTTTTCAGAACCTAGAACAGCTTTTATGGCAATATGAAC
CCTATCTTAGGCCAAATTCCTTTCCGTATCTGTATAGTGTAAATGTGTAT
AGATCGTCATTTTTTTTATTCCCAAAATNGGGCTAAATTCCTTTCCGTAT
CTGTATAGTGTAAAATGTGTATAGATCGTCATTTTTTTTATTCCCAAAAT
CTTACATATCAACATGAAGCTCTTTTTTAAATAACCAATGAGATTTTATC
TTTAATAGTTTTAATAATTTGTTCGAAGTGGAAAACATCTACTGTATTTC
ATAAGATGTTTTTGTTTTTGTCTCTCAGGCTCAAGCTATAGAGATCCCGT
TTAACATTTTTGTCTTTTCTCTTATAGACCACCCATGAAAAGATTTCTGA
CTTTTATGCTACAACGAAAGAAAGAATTTCAAGTGAGCATTGTACTTTTT
ATAAATTATAAAAAATCAAAGAATAGACCTTTTCATAAATTACGTCTCGA
ACATAACTTACCTCGTATTCAAACAATTACCATGGTGATTGTGTCCCTTA
TGCCCACGATTCTTTTATGAAAAGGTCACCATGGCAATAATTTCAGAACG
AGGCAAGTGATGTTCGTAACGTAATTTAAGGTCTATCTGAATAAATTTGA
ACTGTATTTGATTTCCTTTCTAAGATAGATCATGACTATCGAGCTCAGTG
TAAAAAATACAGTGATAAAATTTTCTTCTTTTCTCTTCCAGGTAGTTACA
ACCGAACATTAGAAGATCCATATTTTCTGTTCTCACCTGCAGCAATTGTA
GCTGCAACTGCTACTGGAGCTGTCGTTGCTGGAAAAGGAAGTAAGTCACG
CTTGAAGATATAATGATTATAATCATCTCATTTTATAAGATTACTCTACT
GTAAGTGATTAAAGAACTGATAGATTTTCACTAAGATCTTCTAGATTTCT
AGATTTGTCTAGGACCTCAAATTTTAACTTTAGCTAGAGCGTGTTCCATA
AATACTTTCTTCTTCAAAGAAAAGATTCTATTGTTTTAGTCGATCGTTTT
AGCATAGTGTGCAGAGGGGTCCAGCCTCCAGCATTTTTCAGGGGGGGGGG
GCTAAGGAAAATAGCCCGCAGCTAAATTCCAGAAACATTCATTCATTCCC
ACCTTCACAAGGCAAAATATCCAAGAAATTTTGCATGCAAATTCTCGATA
AATTATTTTAAATTTTTTTTTTAAGAGGGATAAAATCTTCCCCACAGCAT
ATAGATTTTTAACATAATTTAAAATATCTTCAACCTATCAGTTCTGCCCC
AGTTCTATTACACAGCACTCAGCCCCCCTAGCAAGCTAGCCCCCAGTATT
TTTTGAAAAATACAGCCCCCAATCAAGTTAAAATGGTTTAGCCCCCCCCC
TAAGCTCAGGGGGGGGGTGCATTCTATGAATTTAGAGATAATCTTTTTTA
CAGGATGCTTCAAATAACGGAAACATATGTTTTGTGTTCTTCTTATAGGA
AGACCCATCAAAAGGTCATTGTATGGATTACTCTTTGGAACAACAGCTGC
TGCTATATCTTACCCCGAGCGAACACTTGACATTGCTGAGACGAGTTATT
ATCATACCGCTTCTTCCATTGCTCAACTCTTTGCACCAAGTGCACCAACA
ACCACAGAGCGTGTTGTCGAAATTTTAGATGATAAAAACGAGCCTGATGA
AGTAGTAGAATCTGAAATTGTGATATCAGAGGCTGTTACCTCTACCGAGG
AAGAAGAAGTCAGTGCTCCTGCAACTGAGGTAGTTGAGGAAATCATTTCT
GTGATTGAAGATGAAACTCAACCACCGCCTCCACCGCCGCTGCAAGAAGA
AATTGTAACAGAACTGACTGAAGTTGTGGANTCACCGCCTCCGCCGCCGA
CGCCGACGCCACAAGAAGAAGTTGTAGCAGAACTGACTGAGGTTGTGGAA
TCTGAAGGTGGATCCGCTGAAGTTGTGCCTGATTCTGTTAATGATAACGT
ATCAAATGAAAGAAGTGAAGAAATAGTTGGCGAGGAAAATACAGAGGTAC
CTGTGTCAAATAATGAGGTACAAGACTTTGATCCTGGACAAACTGAACTT
CAAGAAATATCTGTCGTTTCATTAGATGATGAAAAAGTTGTTGATGATAA
AGATACTAGACTAGACTTAGATACGGCAGCTAATCAAGAAAATATAATTA
TTGAAGGTGATCTTGGACAATCTGATCCTGAAGATTCTGATATGTATTCA
ACAAGATCTTGATATACGTAATTCTGATTGGACGAGTTTTGTTTTTGTTT
TTGATTTTTTCTTGCTCTACTTTTTTTTAAGTGTGAAAATTTATAATTTT
ATTTTTTATTTTCAATATTTTTTTTTAATTTATTGAATAATTTTATTCAA
ACAAACAAAAAATGAGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000214TCONS_00000214Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000214-proteinTCONS_00000214-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1500623..1503990 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (23.49 tpm) - - (73.88 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
60.93	58.48	46.75	47.13	30.59	24.08	45.24	47.64	42.21	49.55	39.05	36.95	23.96	23.49	27.05	27.63	73.88	71.48	25.2	27.25	37.3	36.67	63.04	54.99	40.22	42.75	54.56	41.94	47.97	45.79