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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000176 ID=TCONS_00000176|Name=TCONS_00000176|organism=Clytia hemisphaerica|type=transcript|length=1725bp
cctatccggatcgataagtaatccatcgatcacatatcgatccgtcatcg
agccgctccgatgatcgatcctatcgagcgcgggggtctggaatATAAGA
TAGAAAAATTTCCCTGACTGAACACCCACGACATTCTGATAAAAGCAAAA
GATCTATTTCGAGAAGAGGTGTCTTACCATTGTATCAAAACACCTTTCTG
AACGTTCACCATCGTTGATAGGTATAGAAAATATGAACAAATATGCCAGA
TGAAATCTTTTAAAGTTGAAAATCTTTAATGCGACTgcgtttttctgact
ttttcttCTCTTGATAGATTTCATAATGGTCAAGAATggactttcgtttt
ctaatatttagaaaacaacttttaatttaCAGACCGATAATTGTCGACAT
TACCCAGCCAGTTTTATTGAACCAGCAAGCTAGTCCGATCCCCATTTCGG
TTATGTATTACAGTCTGTATTTTCTTTGGTCGACAATTACATAATCATTT
CTTTAGTTTTCCTTCAACGTGCGCCGCAGCGTCCACTACTAAATTTTGAT
CGGACCAAAGATGTCCGCCaactaaaaaaattagaaatggacttaaaata
acaaaaataagcTGCTGTTGGAAGTAATTTGAAAAGCAAAATGATGAATG
GAAACTATCCTGAAACAGATTACTCCTCTGTTGGAAATATATCAgTGTAC
TCGTCCGGACTTGGAAGCTTGTCACCTTACTTGAATGTTGACCCTTCCTT
TCTACACCAGGATGGTGGAGCTGAATTCGTTTTTGCCGAGGACAGTCATA
AAAAGAGAGGCTGGGGTGAACGGATGTTTACAAGTATTGGTTGGTCATAT
GGGTCCGGTCTTTTGGTTGGAGGAATCTGGGGTCTTGCTGAAGGCCTACG
TAGACCTGATGGTACAACATTCAAATTGCGATTGAACAGtGTACTCAATG
GGTGTACAAGAAGGGGTCCTTTTCTTGGAAACAGCCTTGCTGTTGTAGct
ttattgtATGGTTGCACAAGTACTGCAATTGAAAAAGCTCGTGGAGTTGA
AGATGAATACAACTCAATAGCTGCGGGTGTTACAAGTGGTGTCCTTTTTA
AATCAACGGGTGGACCACGTGCGATTGCTATCGCAGGAACCATTGGTGGG
GCAGCTGCGCTCATGTTTATTGCATCAAACCGCTTATGGAACAATAGAGG
ACAGACCTGGAGCAAGTCACAGCCTAATTGGGCTTAAAATTAAACTTGAT
CATTGTCAACATATCAAGCTCATACAAGAACCTATTTTGCATTAATCAAC
GAAAATAATTCGTCTTGATTTAGCGTTGACAAAGAGAATCTGAACTTTAA
CAGTTGAACTTTAAAACAAGTGCAAAATGGCTTCTTTGTTTCTGAACTTC
ACaccaaaaaaaacgtaaaatcttCAACATATCAAAACATTATGGAAGAC
TTTTTATAAACAAGCTTTTTCTCTAAAAGATAGAAGCAAGACTCTACTTG
tatattttaacttttattgCCTTTTGACAGAcatattttgtaaaataatt
tttttttcagatttaaaaTAATGGAGTTAGAATATAGTCTTTTATGAGAT
TTTGCTTTCGATTAGGGTTGTTGTGGTCTGTTGTGGTCATCTTTTAATCC
CGGCTTTCtaacttttgattaaaaagatTACCGTTCTAAAATATGTACCA
TAATTCTTTCCTTGGGAAAAATTAG Run BLAST on NCBI protein sequence of TCONS_00000176-protein >TCONS_00000176-protein ID=TCONS_00000176-protein|Name=TCONS_00000176-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MMNGNYPETDYSSVGNISVYSSGLGSLSPYLNVDPSFLHQDGGAEFVFAE
DSHKKRGWGERMFTSIGWSYGSGLLVGGIWGLAEGLRRPDGTTFKLRLNS
VLNGCTRRGPFLGNSLAVVALLYGCTSTAIEKARGVEDEYNSIAAGVTSG
VLFKSTGGPRAIAIAGTIGGAAALMFIASNRLWNNRGQTWSKSQPNWA Run BLAST on NCBI transcript from alignment at sc0000001:757420..766970- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000176 ID=TCONS_00000176|Name=TCONS_00000176|organism=Clytia hemisphaerica|type=transcript|length=9551bp|location=Sequence derived from alignment at sc0000001:757420..766970- (Clytia hemisphaerica)
CCTATCCGGATCGATAAGTAATCCATCGATCACATATCGATCCGTCATCG
AGCCGCTCCGATGATCGATCCTATCGAGCGCGGGGGTCTGGAATATAAGA
TAGAAAAATTTCCCTGACTGAACACCCACGACATTCTGATAAAAGCAAAA
GATCTATTTCGAGAAGAGGTGTCTTACCATTGTATCAAAACACCTTTCTG
AACGTTCACCATCGTTGATAGGTATAGAAAATATGAACAAATATGCCAGA
TGAAATCTTTTAAAGTTGAAAATCTTTAATGCGACTGCGTTTTTCTGACT
TTTTCTTCTCTTGATAGATTTCATAATGGTCAAGAATGGACTTTCGTTTT
CTAATATTTAGAAAACAACTTTTAATTTACAGACCGATAATTGTCGACAT
TACCCAGCCAGTTTTATTGAACCAGCAAGCTAGTCCGATCCCCATTTCGG
TTATGTATTACAGTCTGTATTTTCTTTGGTCGACAATTACATAATCATTT
CTTTAGTTTTCCTTCAACGTGCGCCGCAGCGTCCACTACTAAATTTTGAT
CGGACCAAAGATGTCCGCCAACTAAAAAAATTAGAAATGGACTTAAAATA
ACAAAAATAAGCTGCTGTTGGAAGTAATTTGAAAAGCAAAATGATGAATG
GAAACTATCCTGAAACAGATTACTCCTCTGTTGGAAATATATCAGGTATT
TTTTTTAGTTTTTAAGGGGCAACAAAACTACTGCCGGTTAACAAGTAAAT
AGTTTTCACCTCCAATCTCAGGTAATCCTCTACTTTAATACTCTACTATT
CTCTTAATTAGAGTAAAATCCCGTCTGTCATAGCAACTATTTGGTTAGCC
TGGACATCCAAACTCCAGACCAAAAAACAATTTCACCTTTTAGCTGGTCT
GGTCCAAACTAACAAGAGCAGAACTATCTATCTGTTCTGTATCCTCCGCC
CGACTAGGCTCTCCTGGATTATATCATCTGTTCTGGGAAAAAATGGGACT
CTGTTCAAAATAAAAATTCTGAAAATGCATATCTGTTCTTAAGAAATATT
ATGCTCCGGGAAAAATATAACAGCTATCCCCTTCAGTATAGACCTAACTC
TTCATACAAAAATTACAGAAAAACGCATGTTTGGACTTTGTACCCTATGC
TGCACGCAAGCACTTAAGCCAAAGTTCCACAAAGGCGGGACAAAAATCAG
TTTTTGAAGTTTGCAAAAAAACGCCACATAGAAGATCTTTCAAATTCAGT
ATATATCACAAGTGTTTCAACCGGTATTCCAACGAAGCCATATTTTGGTT
TGTACAGAAATTTCGCCCGCTCAANTCACGATTCACAAGTGTTTCAACCG
GTATTCCAACGAAGCCATATTTTGGTTTGTACAGAAATTTCGCCCGCTCA
AATCTAAACAACAAAATGGTCAAACTCACTAAAGCAAAACATTGCCGCCA
CGGCATTTCCCTAGATAAAATTCTGGTCATGTGACCATCCGTGATTTTAG
ACCAATGAAAACGCTTCATTTCCCCGGATTAAAGTTGTGTCTACACTAAC
AACCGGGAACTAGCTAGAAAAAGAGAGAAAAAACCGGGGGTCAAATTAAA
TGTTTCTCCCTTCTTGCGGCAAACATAAAAGACTTTAAGAGGCCATTTAT
TTAAGAAAGGGGTGTTATATCATAAATAAATTATATAAGTAAGTGATATT
TTAAGTAATAAGTTCATTAACCAGTCTGAGAAATCCTCTTAATTGCACGC
TTATGTTCCGAGGCCGTAAGCGCGCAATTGCACGGTTATCAAAATGGCAG
AATTTTTAAGCGTGTAATTACAAGCTTATCGAAATTGTTCTGAAACAGGC
GGTAAGCGTTCAGCAAGATTGACAGGTGACGGCTTTTGCGGTAAGCATGT
AAGTAATTGCACGCTTTAAAATTTCCTATATTTTTGACACGTAGTTCCTT
CTGAAAGCTATGTTGAATTTCAAAAGCCTAGGGCAGTTTTACTCAAAATT
TATCGTAGAAGAAGATTCCGTAAAAATGGATTGCCCGTTAAATTTTTCAG
TTTTCAATAACATGAAAACCAGAATATGGTTTTTCAATGGAAATAAAAAC
TATAAAGTGCACTTTATACAAACATCAATTTGTCAGATCTAACAAAATTA
ACAACAGCACTGTCATCATTGACAATAAAACAAACGATATTTTGCCAAGA
GCCTTGCAAAAACATTCCAACAACTTCCATCAAAATGATCTGCCACAACT
ATGTCTACCATTTTAGCGCGCAGTCTGAGGATTGAGCTGAGAACGCTCAC
AGAACGCCTGTCATCTCCCGCACGGGTAAAAAAAAATTTAATATTCCAAA
GCAAAAAGACGCAATGCGATTCTAGCTTTACAATAGTGGCGCAGATCATC
AGTGAAGAGTATTCAATTATCATTACCGTATCCTTTTATTTTCATTTTTA
GAACTTTTGCAAAAAAAAGGAAAAATAGAAAAGTTGTATTTTCTACTGCT
CTATTCAAATACTTAATTTGAAAGATCTTCTACTGTATGTGGCATTTTTT
TGCACTGATTTTTGTCCCGCTTTTGCGGGACTTTAGCTTAAATGCTTGCA
TGCAGCACAGGGTACAAAGTACAAATATGCAAAAAATCTTTTTCTGATTA
TGCTTGGGGGTACCTGCATTTTCACTAGTGGGGGCAGAGGCTGTTGTTTT
TGTATGAAGTCATGGTGACCAGCGACCCTTGAAACCCTTGAAACACCCTT
GATTCTTTTCCTGCCCTGGAAAATTTCCTTGAAACCCTTGAAATGCCAAA
TTTTGTGGCATATTTCAGCCATTTTAACTTTCAGGAATACAAAATTTTTC
AAACATGAGTGTATTAGATGAGAAAATATTCTTTTGGAACCCCTGAGATT
CAAGGTGATGATATTCCAAGCTCGTTCTTAAAGGGGTTTATCTTTTAACC
CGTTAAAGTGCCACTTGAGTTATATGAGATCGGCAGGTCTGGGTGATAGA
ATGAGTGGTTGTAAAATTATCAATTATCAGCCAATCTAAAGCACTGAAAA
TCAAAGATTTTCCCCGTCAGGCCAAACTATAGCTGAGCCCTCCTTTACCT
CAACTTACTATAAAGAAAAAGTACAATTAATCTGCCCCCCCAGACCCTCG
CTACCACCTGCTACCACATAGATCTTTTTTCTTGAAATGATTATATATAC
AAATAAACCAGCTGCGCTGGAAGCTCCGGCTTAAGAGATTAAAAGATGTG
AAAGATGAGCTTGTTGAGTTAGTTGTGTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNATTTTCGGCCAATCAAATCACAGTATTATCGGAATCAG
TGATCCGTTTTTGTTAAATCGGAATAGATCATCGGATTAGATAAACAGAC
AAAAAATGTCTTGACCCTTCTTCTTGTCGGAAGAGAGAATTAAAGGCTCC
TAGGCCGGAGCAATAATGATCTTCCAAACAGGATGATCTTATCATGTCTA
CCATTCAAACCATGAATTTGTTCTGCTTTAAAAAATTTGATCTTTAGAGT
TACTTTTAATAACACATTTAATCATATACGTACACACTTTTTTATTATAA
GAATATCTTCTATAAGAATATCAGGGTGAAAATTGGCCAAATTGTAAGAA
TACCCTAAGAATACCCTGTAGGGTGAATTTCACAAAATTTGATAAGAATA
CAGTTTTGGTTAACTTCCTTAGTTAGAGATAAATTGAAGGTTTGAAGAAG
AAATGTAATTTTAAGGTTTAAACCCAAATGTTCACTCTAAAGTCCAAAAC
TCCCAAATTGATCATTTCTCATGTTTGTAAAAAAGTCTAAAGAAAGTCTA
GAAAAGTAAGAATACGTTAAGAATATTTCACCCTCAATTTTGGCACTTTT
TTAAGAATACTTGACCCTCATCCAAAGTACACTATTCTTATAAAAAGAAA
AGCGTATAGGTTGCAAATTGCACTGTTTGTATTTTTGTACTTTAGTGTAC
TCGTCCGGACTTGGAAGCTTGTCACCTTACTTGAATGTTGACCCTTCCTT
TCTACACCAGGTAAGATTTATTAAACAGCTACTACCACCTACTTTCAATG
GCATCAAAAGCACCAATCAAGGGTGATTGGAGCAATCTAGGAAGAAAACC
TTTGAGAGGATAGCTATCATAAGAGGATACTTTAGGTTGGTTGATGTTGT
CAAAGACTTTACCCTAAAGGAAAGACAGAAGGTTGACTGAGTTGGCCGCT
TCAAATCTTTTGAAAAAGGTTGTAAGTGAATGCATTGGTATCCAGAGAGG
GTTGACTTAAGGGTCCAGATGTTGACTTTCCTCTCGCTAACTTTTGTCAG
AAATGAGGAAAGGGACCTTAATTCCATAAATTTTCATGCGCCTTTTTATT
TACGTGCGCAAAAATAAAAGGAGCACGAAATAGCCTATTTTCACGCACTT
GGAGGCGCGAAAATTAAAGGGTGCGCAAATTAGTAATGGTTCTGAACGTG
TAGAAATCTCATCTTAAGGCTTTTTTACTAAAATGGGACCTCGATTCATG
GTAAATATGCCTCTGGGATGTAAGATCTAGCTTGAATACACACTGAAAGC
AAGTAGTTAACTCACTTTAATCATCAAAAACACTCAGAAAATATGCCAGA
AATTGCAACATGAGTGAAAATTAAAGGATTCGGGAATATTTTATTTTACA
AGCTGCGCGAGAATTAAAGGCGCGAAAATAAAAGGCGCGCAAAAATTAAT
GGAATTAAGATAGAGACTTGATCAATTAAATTAGAATTTAGAAACAAAGT
CACATTTGAGAATGCTTTTGTCGGCATGCCAACAACCACTAAAAAATACG
CCTGTGTTCTGTGGGCCAGGGACTAAGTTTTTTTCCTTGTTTGCTACCAG
GGGTATCAGCAGTAGGTTCTGGTAGGTTCAACATCTCTTTAACTTTTAGG
ATGGTGGAGCTGAATTCGTTTTTGCCGAGGACAGTCATAAAAAGAGAGGC
TGGGGTGAACGGATGTTTACAAGTATTGGTTGGTCATATGGGTCCGGTAA
GATATGACGTACCTGAAAGGAACTAATTTGTCCAAATTTTGCCAAAATAA
GGTTGCCTCACCAAAATATGATTCATTTAATTATTTTTTCATCATCTGTA
AAATAACTCCCTAATTTCAAACTTTTTTACTAACTTTTTTCTTGCTGTTA
TTTGGCAAAGTCAGTCAATCTCTTACTAAAATATGCTCCTCTCCAAATTA
TTTTTATTGTATTTTTGTTACTCACACTAAACTTAGACTTTTTCTTAGGA
TAATATCTTTTTAAATAGAAATGTAAGTCCTCCATACAAATTTACTCCAA
GAATCTCATTTCAAAGCTTTCCTTTTTTATTGAAAATGAAAAATTATGGT
CTGAAAAAAATACAAGGAAATACACCCAAAAGAAACCTGTTATTTACAAA
TTTTTATATTCTAGGTCTTTTGGTTGGAGGAATCTGGGGTCTTGCTGAAG
GCCTACGTAGACCTGATGGTACAACATTCAAATTGCGATTGAACAGGTCT
GTCTTTTTCTCAAATGAAAGTAATTTACTCAAGGTGGTCAATGAAATTAG
AAAATAGGGTTTAGTCACAGGGTACTTGTGCCCCTAAAAGTGCCTTTGGC
CCTATGTTATGACTCGAGTCCAACCCTGACCCTAACTGATAATAATCAAA
TCCTGACCCCCGGAAAATTATCACAGATAGAAAGAACGAAAAAAATTGCT
GATTGACAAACACCCTCTTGTTACTTATATCTCCAAACAAAATGTAATTA
GCCATTATGAAAGCAAAACAGACGTTTCTTATGAAAGTATCAATTGAAAT
AATATGGGTTTAATAATAATTGAGTAAATTTCACTACCTAGAAAGGTAAG
AAGCACTATACTGTTAACCCTTGCTAATTCGAATTGAAACAGGAAGTCTA
ATTTTGTTCAAATTATAGAGAGTATCTCAGGCTGCATCGTTTAAGGCGTG
TGATAGCACGCGCACGCCTCCACACACACCTAAAATCTCTGAGCGGTGTG
ATCAATCACACGCCATAAATGCAAATTTCACTACTAAAGTTGTACACAGC
ACTCCTTATCACACGCCTAAATTCCAAAAAATAAAGTTTTGGGAGTGTGA
TTGACCATACGCCTGCATTTTTCAAATGACAAAGCCGGGTATCTTTTGAG
ACTTTTCCTTCAACTGGAACTGAAAATTAGTTTGAATTATAGAAGGATTT
GTATGATAGAAGTTTGAATTAGTGAGAGTCTACTGTATGTATAATAATAG
TTTGGATCACAATTTTCGGCTGATGACTTATTAACCCCAGGCTCTACTGG
TACTGAAATAGTTTGGTTTATATTGATGACAGATTGTTTTTTATATGTTT
TCTTATTTATTTTAGTGTACTCAATGGGTGTACAAGAAGGGGTCCTTTTC
TTGGAAACAGCCTTGCTGTTGTAGGTGAGTGATATGATATGGTTGTCATC
ACAAGTGATAACTAAATAAGCATTGAGATCAGCATTTGGGGTAAATTTAA
AAGATTTTCAGTGTGAATTCCCTTTTGTAAATTATGATTTTTAACTCTTT
CACAGAAGTTTTTAAGTGTATAACAGATAAGGTTTAAAAAAGTTTGAAGG
ACTTAGGTATAGACATTACTAAAGATGATTTGTATAATTCCTTGTTTTAG
CTTTATTGTATGGTTGCACAAGTACTGCAATTGAAAAAGCTCGTGGAGTT
GAAGATGAATACAACTCAATAGCTGCGGGTGTTACAAGTGGTGTCCTTTT
TAAATCAACGGGTATGTAAACTTAATAATTACGCATTACCTTTTAAGGAA
ACTATACTTCACTATATTTCACAGGAAGTTTTATTATCAGCTTTGGATGT
CTACCGTGAAAATTATTTCCACAAAATAAAATCCGTAAAGAAGCCTTTGA
GTCTTAAATGTCTTAAACCATTAAAATATTTGAGTCTCAACTACAAATTT
AGGTTCTACAAAAAGCTTATTTTATAACGTTGCAATACAAAAAGTAGTAT
TTTTTGGGGGCGACAGGACAAGTTCTAGTGCCAAAACAAAGTTTTAAATC
AGACAGCCTTAAGATTTTCAAAAAATGATCAGCACATTCAACAGTATTGA
AAATCAAATTATTTTTACTACTAAATTATTTTCAGGTGGACCACGTGCGA
TTGCTATCGCAGGAACCATTGGTGGGGCAGCTGCGCTCATGTTTATTGCA
TCAAACCGCTTATGGAACAATAGAGGACAGACCTGGAGCAAGTCACAGCC
TAATTGGGCTTAAAATTAAACTTGATCATTGTCAACATATCAAGCTCATA
CAAGAACCTATTTTGCATTAATCAACGAAAATAATTCGTCTTGATTTAGC
GTTGACAAAGAGAATCTGAACTTTAACAGTTGAACTTTAAAACAAGTGCA
AAATGGCTTCTTTGTTTCTGAACTTCACACCAAAAAAAACGTAAAATCTT
CAACATATCAAAACATTATGGAAGACTTTTTATAAACAAGCTTTTTCTCT
AAAAGATAGAAGCAAGACTCTACTTGTATATTTTAACTTTTATTGCCTTT
TGACAGACATATTTTGTAAAATAATTTTTTTTTCAGATTTAAAATAATGG
AGTTAGAATATAGTCTTTTATGAGATTTTGCTTTCGATTAGGGTTGTTGT
GGTCTGTTGTGGTCATCTTTTAATCCCGGCTTTCTAACTTTTGATTAAAA
AGATTACCGTTCTAAAATATGTACCATAATTCTTTCCTTGGGAAAAATTA
G Coding sequence (CDS) from alignment at sc0000001:757420..766970- >TCONS_00000176 ID=TCONS_00000176|Name=TCONS_00000176|organism=Clytia hemisphaerica|type=CDS|length=4179bp|location=Sequence derived from alignment at sc0000001:757420..766970- (Clytia hemisphaerica)
GTGGACCACGTGCGATTGCTATCGCAGGAACCATTGGTGGGGCAGCTGCG
CTCATGTTTATTGCATCAAACCGCTTATGGAACAATAGAGGACAGACCTG
GAGCAAGTCACAGCCTAATTGGGCTTAACTTTATTGTATGGTTGCACAAG
TACTGCAATTGAAAAAGCTCGTGGAGTTGAAGATGAATACAACTCAATAG
CTGCGGGTGTTACAAGTGGTGTCCTTTTTAAATCAACGGTGTACTCAATG
GGTGTACAAGAAGGGGTCCTTTTCTTGGAAACAGCCTTGCTGTTGTAGGT
CTTTTGGTTGGAGGAATCTGGGGTCTTGCTGAAGGCCTACGTAGACCTGA
TGGTACAACATTCAAATTGCGATTGAACAGGATGGTGGAGCTGAATTCGT
TTTTGCCGAGGACAGTCATAAAAAGAGAGGCTGGGGTGAACGGATGTTTA
CAAGTATTGGTTGGTCATATGGGTCCGTGTACTCGTCCGGACTTGGAAGC
TTGTCACCTTACTTGAATGTTGACCCTTCCTTTCTACACCAGATGATGAA
TGGAAACTATCCTGAAACAGATTACTCCTCTGTTGGAAATATATCAGGTG
GACCACGTGCGATTGCTATCGCAGGAACCATTGGTGGGGCAGCTGCGCTC
ATGTTTATTGCATCAAACCGCTTATGGAACAATAGAGGACAGACCTGGAG
CAAGTCACAGCCTAATTGGGCTTAACTTTATTGTATGGTTGCACAAGTAC
TGCAATTGAAAAAGCTCGTGGAGTTGAAGATGAATACAACTCAATAGCTG
CGGGTGTTACAAGTGGTGTCCTTTTTAAATCAACGGTGTACTCAATGGGT
GTACAAGAAGGGGTCCTTTTCTTGGAAACAGCCTTGCTGTTGTAGGTCTT
TTGGTTGGAGGAATCTGGGGTCTTGCTGAAGGCCTACGTAGACCTGATGG
TACAACATTCAAATTGCGATTGAACAGGATGGTGGAGCTGAATTCGTTTT
TGCCGAGGACAGTCATAAAAAGAGAGGCTGGGGTGAACGGATGTTTACAA
GTATTGGTTGGTCATATGGGTCCGTGTACTCGTCCGGACTTGGAAGCTTG
TCACCTTACTTGAATGTTGACCCTTCCTTTCTACACCAGATGATGAATGG
AAACTATCCTGAAACAGATTACTCCTCTGTTGGAAATATATCAGGTGGAC
CACGTGCGATTGCTATCGCAGGAACCATTGGTGGGGCAGCTGCGCTCATG
TTTATTGCATCAAACCGCTTATGGAACAATAGAGGACAGACCTGGAGCAA
GTCACAGCCTAATTGGGCTTAACTTTATTGTATGGTTGCACAAGTACTGC
AATTGAAAAAGCTCGTGGAGTTGAAGATGAATACAACTCAATAGCTGCGG
GTGTTACAAGTGGTGTCCTTTTTAAATCAACGGTGTACTCAATGGGTGTA
CAAGAAGGGGTCCTTTTCTTGGAAACAGCCTTGCTGTTGTAGGTCTTTTG
GTTGGAGGAATCTGGGGTCTTGCTGAAGGCCTACGTAGACCTGATGGTAC
AACATTCAAATTGCGATTGAACAGGATGGTGGAGCTGAATTCGTTTTTGC
CGAGGACAGTCATAAAAAGAGAGGCTGGGGTGAACGGATGTTTACAAGTA
TTGGTTGGTCATATGGGTCCGTGTACTCGTCCGGACTTGGAAGCTTGTCA
CCTTACTTGAATGTTGACCCTTCCTTTCTACACCAGATGATGAATGGAAA
CTATCCTGAAACAGATTACTCCTCTGTTGGAAATATATCAGGTGGACCAC
GTGCGATTGCTATCGCAGGAACCATTGGTGGGGCAGCTGCGCTCATGTTT
ATTGCATCAAACCGCTTATGGAACAATAGAGGACAGACCTGGAGCAAGTC
ACAGCCTAATTGGGCTTAACTTTATTGTATGGTTGCACAAGTACTGCAAT
TGAAAAAGCTCGTGGAGTTGAAGATGAATACAACTCAATAGCTGCGGGTG
TTACAAGTGGTGTCCTTTTTAAATCAACGGTGTACTCAATGGGTGTACAA
GAAGGGGTCCTTTTCTTGGAAACAGCCTTGCTGTTGTAGGTCTTTTGGTT
GGAGGAATCTGGGGTCTTGCTGAAGGCCTACGTAGACCTGATGGTACAAC
ATTCAAATTGCGATTGAACAGGATGGTGGAGCTGAATTCGTTTTTGCCGA
GGACAGTCATAAAAAGAGAGGCTGGGGTGAACGGATGTTTACAAGTATTG
GTTGGTCATATGGGTCCGTGTACTCGTCCGGACTTGGAAGCTTGTCACCT
TACTTGAATGTTGACCCTTCCTTTCTACACCAGATGATGAATGGAAACTA
TCCTGAAACAGATTACTCCTCTGTTGGAAATATATCAGGTGGACCACGTG
CGATTGCTATCGCAGGAACCATTGGTGGGGCAGCTGCGCTCATGTTTATT
GCATCAAACCGCTTATGGAACAATAGAGGACAGACCTGGAGCAAGTCACA
GCCTAATTGGGCTTAACTTTATTGTATGGTTGCACAAGTACTGCAATTGA
AAAAGCTCGTGGAGTTGAAGATGAATACAACTCAATAGCTGCGGGTGTTA
CAAGTGGTGTCCTTTTTAAATCAACGGTGTACTCAATGGGTGTACAAGAA
GGGGTCCTTTTCTTGGAAACAGCCTTGCTGTTGTAGGTCTTTTGGTTGGA
GGAATCTGGGGTCTTGCTGAAGGCCTACGTAGACCTGATGGTACAACATT
CAAATTGCGATTGAACAGGATGGTGGAGCTGAATTCGTTTTTGCCGAGGA
CAGTCATAAAAAGAGAGGCTGGGGTGAACGGATGTTTACAAGTATTGGTT
GGTCATATGGGTCCGTGTACTCGTCCGGACTTGGAAGCTTGTCACCTTAC
TTGAATGTTGACCCTTCCTTTCTACACCAGATGATGAATGGAAACTATCC
TGAAACAGATTACTCCTCTGTTGGAAATATATCAGGTGGACCACGTGCGA
TTGCTATCGCAGGAACCATTGGTGGGGCAGCTGCGCTCATGTTTATTGCA
TCAAACCGCTTATGGAACAATAGAGGACAGACCTGGAGCAAGTCACAGCC
TAATTGGGCTTAACTTTATTGTATGGTTGCACAAGTACTGCAATTGAAAA
AGCTCGTGGAGTTGAAGATGAATACAACTCAATAGCTGCGGGTGTTACAA
GTGGTGTCCTTTTTAAATCAACGGTGTACTCAATGGGTGTACAAGAAGGG
GTCCTTTTCTTGGAAACAGCCTTGCTGTTGTAGGTCTTTTGGTTGGAGGA
ATCTGGGGTCTTGCTGAAGGCCTACGTAGACCTGATGGTACAACATTCAA
ATTGCGATTGAACAGGATGGTGGAGCTGAATTCGTTTTTGCCGAGGACAG
TCATAAAAAGAGAGGCTGGGGTGAACGGATGTTTACAAGTATTGGTTGGT
CATATGGGTCCGTGTACTCGTCCGGACTTGGAAGCTTGTCACCTTACTTG
AATGTTGACCCTTCCTTTCTACACCAGATGATGAATGGAAACTATCCTGA
AACAGATTACTCCTCTGTTGGAAATATATCAGGTGGACCACGTGCGATTG
CTATCGCAGGAACCATTGGTGGGGCAGCTGCGCTCATGTTTATTGCATCA
AACCGCTTATGGAACAATAGAGGACAGACCTGGAGCAAGTCACAGCCTAA
TTGGGCTTAACTTTATTGTATGGTTGCACAAGTACTGCAATTGAAAAAGC
TCGTGGAGTTGAAGATGAATACAACTCAATAGCTGCGGGTGTTACAAGTG
GTGTCCTTTTTAAATCAACGGTGTACTCAATGGGTGTACAAGAAGGGGTC
CTTTTCTTGGAAACAGCCTTGCTGTTGTAGGTCTTTTGGTTGGAGGAATC
TGGGGTCTTGCTGAAGGCCTACGTAGACCTGATGGTACAACATTCAAATT
GCGATTGAACAGGATGGTGGAGCTGAATTCGTTTTTGCCGAGGACAGTCA
TAAAAAGAGAGGCTGGGGTGAACGGATGTTTACAAGTATTGGTTGGTCAT
ATGGGTCCGTGTACTCGTCCGGACTTGGAAGCTTGTCACCTTACTTGAAT
GTTGACCCTTCCTTTCTACACCAGATGATGAATGGAAACTATCCTGAAAC
AGATTACTCCTCTGTTGGAAATATATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000176-exon-sc0000001-1575043694:766276..766970 | TCONS_00000176-exon-sc0000001-1575043694:766276..766970 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1575043694:761161..761225 | TCONS_00000176-exon-sc0000001-1575043694:761161..761225 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1575043694:760175..760271 | TCONS_00000176-exon-sc0000001-1575043694:760175..760271 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1575043694:759675..759756 | TCONS_00000176-exon-sc0000001-1575043694:759675..759756 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1575043694:758747..758805 | TCONS_00000176-exon-sc0000001-1575043694:758747..758805 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1575043694:758410..758520 | TCONS_00000176-exon-sc0000001-1575043694:758410..758520 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1575043694:757420..758035 | TCONS_00000176-exon-sc0000001-1575043694:757420..758035 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1510915933:766276..766970 | TCONS_00000176-exon-sc0000001-1510915933:766276..766970 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1510915933:761161..761225 | TCONS_00000176-exon-sc0000001-1510915933:761161..761225 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1510915933:760175..760271 | TCONS_00000176-exon-sc0000001-1510915933:760175..760271 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1510915933:759675..759756 | TCONS_00000176-exon-sc0000001-1510915933:759675..759756 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1510915933:758747..758805 | TCONS_00000176-exon-sc0000001-1510915933:758747..758805 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1510915933:758410..758520 | TCONS_00000176-exon-sc0000001-1510915933:758410..758520 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1510915933:757420..758035 | TCONS_00000176-exon-sc0000001-1510915933:757420..758035 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1491911889:766276..766970 | TCONS_00000176-exon-sc0000001-1491911889:766276..766970 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1491911889:761161..761225 | TCONS_00000176-exon-sc0000001-1491911889:761161..761225 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1491911889:760175..760271 | TCONS_00000176-exon-sc0000001-1491911889:760175..760271 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1491911889:759675..759756 | TCONS_00000176-exon-sc0000001-1491911889:759675..759756 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1491911889:758747..758805 | TCONS_00000176-exon-sc0000001-1491911889:758747..758805 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1491911889:758410..758520 | TCONS_00000176-exon-sc0000001-1491911889:758410..758520 | Clytia hemisphaerica | exon |
| TCONS_00000176-exon-sc0000001-1491911889:757420..758035 | TCONS_00000176-exon-sc0000001-1491911889:757420..758035 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:757420..766970 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR003397 | Tim17/Tim22/Tim23/PMP24 |
Blast
BLAST of TCONS_00000176 vs. Swiss-Prot (Human)
Match: TIM23 (Mitochondrial import inner membrane translocase subunit Tim23 OS=Homo sapiens GN=TIMM23 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.696e-21 Identity = 56/133 (42.11%), Postives = 75/133 (56.39%), Query Frame = 2
Query: 725 PYLNVDPSFLHQDGGAEFVFAEDSHKKRGWGERMFTSIGWSYGSGLLVGGIWGLAEGLRRPDGTTF-KLRLNSVLNGCTRRGPFLGNSLAVVALLYGCTSTAIEKARGVEDEYNSIAAGVTSGVLFKSTGGPR 1120
PYLNVDP +L QD EF+ ++K RG E F +IG +G G + GL GL+ + K R +LN TR+G N+L +ALLY IEK RG ED+ N++AAG +G+L+K TGG R
Sbjct: 44 PYLNVDPRYLVQDT-DEFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNGLRLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLR 175
The following BLAST results are available for this feature:
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