TCONS_00000176-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000176-protein
Unique NameTCONS_00000176-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length198

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000176-protein ID=TCONS_00000176-protein|Name=TCONS_00000176-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MMNGNYPETDYSSVGNISVYSSGLGSLSPYLNVDPSFLHQDGGAEFVFAE
DSHKKRGWGERMFTSIGWSYGSGLLVGGIWGLAEGLRRPDGTTFKLRLNS
VLNGCTRRGPFLGNSLAVVALLYGCTSTAIEKARGVEDEYNSIAAGVTSG
VLFKSTGGPRAIAIAGTIGGAAALMFIASNRLWNNRGQTWSKSQPNWA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000104XLOC_000104Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000176TCONS_00000176Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003397Tim17/Tim22/Tim23/PMP24
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24PFAMPF02466Tim17coord: 64..172
e-value: 6.3E-25
score: 87.4

Blast
[Close]
BLAST of TCONS_00000176-protein vs. Swiss-Prot (Human)
Match: TIM23 (Mitochondrial import inner membrane translocase subunit Tim23 OS=Homo sapiens GN=TIMM23 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.028e-28
Identity = 70/176 (39.77%), Postives = 93/176 (52.84%), Query Frame = 0 
Query:   11 YSSVGNISVYSSGLGSLSPYLNVDPSFLHQDGGAEFVFAEDSHKKRGWGERMFTSIGWSYGSGLLVGGIWGLAEGLRRPDGTTF-KLRLNSVLNGCTRRGPFLGNSLAVVALLYGCTSTAIEKARGVEDEYNSIAAGVTSGVLFKSTGGPRAIAIAGTIGGAAALMFIASNRLWNN 185
            YS      V  +G+  LSPYLNVDP +L QD   EF+    ++K RG  E  F +IG    +G   G + GL  GL+      + K R   +LN  TR+G    N+L  +ALLY      IEK RG ED+ N++AAG  +G+L+K TGG R IA     GG   L   +   L+NN
Sbjct:   26 YSHADLAGVPLTGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNGLRLGLKETQNMAWSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIA----RGGLTGLTLTSLYALYNN 196
The following BLAST results are available for this feature:
BLAST of TCONS_00000176-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TIM231.028e-2839.77Mitochondrial import inner membrane translocase su... [more]
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