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TCONS_00000137 (transcript) - C. hemisphaerica

Overview
NameTCONS_00000137
Unique NameTCONS_00000137
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3240

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00000137 ID=TCONS_00000137|Name=TCONS_00000137|organism=Clytia hemisphaerica|type=transcript|length=3240bp
ttcatattgattgaattatcattgtttaaaatatctctttatttgaaagt
aagagGGTTTCGTGACGTCAGCGCCGAACTTTCATTTCGATAGAGAAACT
GTTTGTAGACAAAAATTATGGAAAGAAGATGTTTTAtagcaaaatataat
tttgatgtacGTAGACGTAGAgatgttttgagaaaaatgtaaTTAGAAGA
ACGAACTTGAAAGATATGGTATTGTGtcaagctttcggatgttcCAATAA
ATCGTCAGGGTCAAAGGCTATAAAAGggaaatgttttttcaaaattcctg
ACCCAAAGAAAGAACGTGATAGATGTTCACGATGGCTACACAACATGGGA
AATGCCAAATTGACTATCAACACTTTCGAAGCTGCTCGTCATCGAGTCTT
ATGCAGTGACCACTTCCACTCGAAATGCTTTGAACGAGACTTGAAAGCTG
AACTTTGTCCATTGTACAACACTAACGATGGACCTGCAAGGGCAAAACGT
CTCATTGATGGGGCTATACCGACAATTTTTGACCATCAGGTATACGAACA
AATTAACATGGATGGAACTACAATCTCTTCAAGACAACCTAGAAAAAGAA
TCTCTGATATGGAGAGAGCAGATGTTGTCAAGAAACTCCTGGTTGACTAT
GAACAATCCATTGATAAGGAGAGGATCGTAAATCAAGAAAATATCGAACC
ATCCGATACGAACGACGCACCTGAGGAGACAGTGAATCAAAACGAAAGTC
CAATTGAAAAGGAGATAGTCGAAACCAGCAGTGACGTAAGAAAAACCAAT
GAAGTCGGTACACAAACGGAAGATATTCTATGGCCAACTTCGTCAAGTCC
TATCAAAAATGCAAGTCAAGATTCCATCTCCCAACCCGATCTCTCATTTG
TTCACGATAAAGATGACCCTGATTATGAGCCTTCTGTCATCGAAAACTCT
AACCGAGAAGAGGTGAAAATCGATATTTTAAACGATGAAAAATTTGTCGT
TTACGAAGGAATGCTGGATCAACTTGTTTCATGCTTACGTTGCAAGGTTT
GTGCACTACCTGTCGAcgaaattaagaaaattaagcTAGGAACTAGTATT
CACTATAAAATCTTTTGTGACAACGAACATGTCATAATTGATTGGATGAG
CCAACCATTGATTGGGAAAATGCCTGCTTTTAATTTGTTGATTTCCGCCT
CTGTATTTTTTTCTGGATCGAATTTTGAAAGCATTAGAAAACCTGTGAGC
TTTTCCGGACTGAATTTTGTAAATGCTAATACCTTCTACAAGATTCAACG
TGTACTTGTAATACCTAGTGTCAACCaagttttcaaacaaaatataGAGG
AAGCAAGAgcagaaataaaaaccaaagcaGATCTTGAAATTGTAGGGGAT
GGTCGATTCGATTCACCAGGAAAATCAGCGAAGTACTGCACGTACACATG
CCAATCACCCGAGACCAAAAAGATTATCGCCACCTCAACAGTCCAAACTT
CAAAAGGCAAAGGCTCTGCGCCTCTTGAACTTGaaggttttaaaaattgt
ttgaccGATTTAGAGAGCAGTGGTTTCAAGGTTAAGAAGATAGCTACTGA
TAGGAACATGCAATTGGCAAAATGGCTGAGAGAAAATCGTGCCCGTATAA
TCAGAAAGTATGATACCTGGCATTTTTCGAAGAATATCACTTCAAAATTG
AGGAAAGTGTCTAAACGAAAAGGTTGCAAAGTAATCCAAGAGTGGATTTG
ACAGATCGGAAATCACCTATTTTGGTGTGCCGAAAATTGTAAGGGAGATG
CTGAAACCTTGAAGCAAATGTGGAAATCTCTGTTGCACCACGTCACAAAT
CGTCATCGATTTAAGAGGGCTTACCCCAAATACCCCAAGTGCTGCCATAA
ATCATTGAAAAGGAAGGAGACTGCACAGAAAAAATGGATCGTGAAAGATT
CGGTAGCGTATGATGCATTAGAAAATGTCGTGACAGAAAGCAAAACCCTC
AATGACATGGATCATCTCGTCAATCCATTACACACCGGGAGTATCGAAGT
ATTCCATTCGCTCGTTAATTCTTACACCCCAAAAAGATTGGAATTTGAGC
TGAACGTGATGGATGCACGGGTGAAAGTAGCCGTAATTGATCACAATAGC
AACGTGGGCAGGCAGCAAGCAGTCATTACCTCCGAGCGTAAAGGATCAGG
GAAAAAGGGAGAAAAACAGTGGAAAATCGTCTCTTCAAAGTTGTCAAAAG
ATTGGGTGGCCAAAGAGAAGAAGGAAGCAAAGTCTTACGATTTCGTGAAA
ACACTTTTAACTGAGGTtataaaaaggaaagaaaaaggaGAGAAGATTGA
CCAAAAAGCCTCTGAATTAGCGAATAGACTCGTAAGCCCAAAAAACATTG
CATTTACAGAACGTCCAGAAAGACAATTGGTTTtggaaaaacatttcaaa
attccttttatattatatatctATCTATACTGTATCTTCACAAAAGATTA
TAAGTCTAGTTGCTCAATGAAGCTCTTTTGAAACCAGTATATTTTCCACC
AATAGACTCAGGGAAcgtgttttttatttctttcacgACACAAGATGGGA
TCACCACTCTTTTGTCACGCCCAAGTATTTCGAAATAATGTGTCCACGAT
GTGTATTGGTAATACGCAGTGTAACGATATTGCCtgtagaaataaaagaa
aacaaagactGGTTTTCTATTTGAACTCTTGCCTAGAATTGATTCAATAA
ATTTATTTAGAATCTTCATTTTGCTAGATTTACAAACTATTTTTATAGAT
TTACGAACTATTTTACGATCTATGATGTATTAAGTAAAACCCAATCAAAT
TTacctgtttttaatttttttgattcttttgaaaattttcttatgTCTCC
TTCTTGTTATAAAGGTGAACTCAAGGGCTGATGGGGTGAGAATGAAAGGT
TTGAAGTCTTTGTGTTTTGTAATACAAGATATGCCTTTAAGTTTTTCTTC
GAGAATACTACATTCTTTGCAACAGAGACATTCTTCTAAAGTGAAATCGG
TGCCAATTACACAGTTTCTACAAGTGCACCAATGCAAGTTCTCAAGTCTA
CTTGACTCCAGGTCATCATTTTCCCGTTCGCTATCACTTGAAGACGAGCT
TTCATCTTCCTTGTGCTTTGCTGACAGGATCGCTAGCTCTTTTTTTGAAT
ACTCAGGTTCAAAACCATAAAACCCTCCAATAGCTTCATC
Run BLAST on NCBI

protein sequence of TCONS_00000137-protein

>TCONS_00000137-protein ID=TCONS_00000137-protein|Name=TCONS_00000137-protein|organism=Clytia hemisphaerica|type=polypeptide|length=511bp
MVLCQAFGCSNKSSGSKAIKGKCFFKIPDPKKERDRCSRWLHNMGNAKLT
INTFEAARHRVLCSDHFHSKCFERDLKAELCPLYNTNDGPARAKRLIDGA
IPTIFDHQVYEQINMDGTTISSRQPRKRISDMERADVVKKLLVDYEQSID
KERIVNQENIEPSDTNDAPEETVNQNESPIEKEIVETSSDVRKTNEVGTQ
TEDILWPTSSSPIKNASQDSISQPDLSFVHDKDDPDYEPSVIENSNREEV
KIDILNDEKFVVYEGMLDQLVSCLRCKVCALPVDEIKKIKLGTSIHYKIF
CDNEHVIIDWMSQPLIGKMPAFNLLISASVFFSGSNFESIRKPVSFSGLN
FVNANTFYKIQRVLVIPSVNQVFKQNIEEARAEIKTKADLEIVGDGRFDS
PGKSAKYCTYTCQSPETKKIIATSTVQTSKGKGSAPLELEGFKNCLTDLE
SSGFKVKKIATDRNMQLAKWLRENRARIIRKYDTWHFSKNITSKLRKVSK
RKGCKVIQEWI
Run BLAST on NCBI

transcript from alignment at sc0000001:2866590..2870262+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00000137 ID=TCONS_00000137|Name=TCONS_00000137|organism=Clytia hemisphaerica|type=transcript|length=3673bp|location=Sequence derived from alignment at sc0000001:2866590..2870262+ (Clytia hemisphaerica)
ttcatattgattgaattatcattgtttaaaatatctctttatttgaaagt aagagGGTTTCGTGACGTCAGCGCCGAACTTTCATTTCGATAGAGAAACT GTTTGTAGACAAAAATTATGGAAAGAAGATGTTTTAtagcaaaatataat tttgatgtacGTAGACGTAGAgatgttttgagaaaaatgtaaTTAGAAGA ACGAACTTGAAAGATATGGTATTGTGtcaagctttcggatgttcCAATAA ATCGTCAGGGTCAAAGGCTATAAAAGggaaatgttttttcaaaattcctg ACCCAAAGAAAGAACGTGATAGATGTTCACGATGGCTACACAACATGGGA AATGCCCAATTGACTATCAATACTTTCGAAGCTGCTCGTCATCGAGTCTT ATGCAGTGACAACTTCCACTCANCATGGGAAATGCCAAATTGACTATCAA CACTTTCGAAGCTGCTCGTCATCGAGTCTTATGCAGTGACCACTTCCACT CGAAATGCTTTGAACGAGACTTGAAAGCTGAACTTTGTCCATTGTACAAC ACTAACGATGGACCTGCAAGGGCAAAACGTCTCATTGATGGGGCTATACC GACAATTTTTGACCATCAGGTATACGAACAAATTAACATGGATGGAACTA CAATCTCTTCAAGACAACCTAGAAAAAGAATCTCTGATATGGAGAGAGCA GATGTAAGTAGACAGTTTCCATTTAAACAAcagaaattttggaaaagtta TAAAATATGGTTTTCCAAGCCCTTTGACAAGTCTTCCTTTTgacttttga caattttcatCTTTAACAAGATATAAGCCTCATGTCAGGGTCAAGAGCAT ggtcaacctcgtccccgtgtatcccaggctttatttatgttactgattga cgccagagaatattatctagcgctatcagtaagcatcaaaaagctgataa tgcgcagggaacgagttTGGAGCATGGTAAGAAAGATActaagacagggg tgtatattgCAACAATCGATCAACACTATAAACTTGATTCTACATTTTGG TTTAAGGTTGTCAAGAAACTCCTGGTTGACTATGAACAATCCATTGATAA GGAGAGGATCGTAAATCAAGAAAATATCGAACCATCCGATACGAACGACG CACCTGAGGAGACAGTGAATCAAAACGAAAGTCCAATTGAAAAGGAGATA GTCGAAACCAGCAGTGACGTAAGAAAAACCAATGAAGTCGGTACACAAAC GGAAGATATTCTATGGCCAACTTCGTCAAGTCCTATCAAAAATGCAAGTC AAGATTCCATCTCCCAACCCGATCTCTCATTTGTTCACGATAAAGATGAC CCTGATTATGAGCCTTCTGTCATCGAAAACTCTAACCGAGAAGAGGTGAA AATCGATATTTTAAACGATGAAAAATTTGTCGTTTACGAAGGAATGCTGG ATCAACTTGTTTCATGCTTACGTTGCAAGGTTTGTGCACTACCTGTCGAc gaaattaagaaaattaagcTAGGAACTAGTATTCACTATAAAATCTTTTG TGACAACGAACATGTCATAATTGATTGGATGAGCCAACCATTGATTGGGA AAATGCCTGCTTTTAATTTGTTGATTTCCGCCTCTGTATTTTTTTCTGGA TCGAATTTTGAAAGCATTAGAAAACCTGTGAGCTTTTCCGGACTGAATTT TGTAAATGCTAATACCTTCTACAAGATTCAACGTGTACTTGTAATACCTA GTGTCAACCaagttttcaaacaaaatataGAGGAAGCAAGAgcagaaata aaaaccaaagcaGATCTTGAAATTGTAGGGGATGGTCGATTCGATTCACC AGGAAAATCAGCGAAGTACTGCACGTACACATGCCAATCACCCGAGACCA AAAAGATTATCGCCACCTCAACAGTCCAAACTTCAAAAGGCAAAGGCTCT GCGCCTCTTGAACTTGaaggttttaaaaattgtttgaccGATTTAGAGAG CAGTGGTTTCAAGGTTAAGAAGATAGCTACTGATAGGAACATGCAATTGG CAAAATGGCTGAGAGAAAATCGTGCCCGTATAATCAGAAAGTATGATACC TGGCATTTTTCGAAGAATATCACTTCAAAATTGAGGAAAGTGTCTAAACG AAAAGGTTGCAAAGTAATCCAAGAGTGGATTTGACAGATCGGAAATCACC TATTTTGGTGTGCCGAAAATTGTAAGGGAGATGCTGAAACCTTGAAGCAA ATGTGGAAATCTCTGTTGCACCACGTCACAAATCGTCATCGATTTAAGAG GGCTTACCCCAAATACCCCAAGTGCTGCCATAAATCATTGAAAAGGAAGG AGACTGCACAGAAAAAATGGATCGTGAAAGATTCGGTAGCGTATGATGCA TTAGAAAATGTCGTGACAGAAAGCAAAACCCTCAATGACATGGATCATCT CGTCAATCCATTACACACCGGGAGTATCGAAGTATTCCATTCGCTCGTTA ATTCTTACACCCCAAAAAGATTGGAATTTGAGCTGAACGTGATGGATGCA CGGGTGAAAGTAGCCGTAATTGATCACAATAGCAACGTGGGCAGGCAGCA AGCAGTCATTACCTCCGAGCGTAAAGGATCAGGGAAAAAGGGAGAAAAAC AGTGGAAAATCGTCTCTTCAAAGTTGTCAAAAGATTGGGTGGCCAAAGAG AAGAAGGAAGCAAAGTCTTACGATTTCGTGAAAACACTTTTAACTGAGGT tataaaaaggaaagaaaaaggaGAGAAGATTGACCAAAAAGCCTCTGAAT TAGCGAATAGACTCGTAAGCCCAAAAAACATTGCATTTACAGAACGTCCA GAAAGACAATTGGTTTtggaaaaacatttcaaaattccttttatattata tatctATCTATACTGTATCTTCACAAAAGATTATAAGTCTAGTTGCTCAA TGAAGCTCTTTTGAAACCAGTATATTTTCCACCAATAGACTCAGGGAAcg tgttttttatttctttcacgACACAAGATGGGATCACCACTCTTTTGTCA CGCCCAAGTATTTCGAAATAATGTGTCCACGATGTGTATTGGTAATACGC AGTGTAACGATATTGCCtgtagaaataaaagaaaacaaagactGGTTTTC TATTTGAACTCTTGCCTAGAATTGATTCAATAAATTTATTTAGAATCTTC ATTTTGCTAGATTTACAAACTATTTTTATAGATTTACGAACTATTTTACG ATCTATGATGTATTAAGTAAAACCCAATCAAATTTacctgtttttaattt ttttgattcttttgaaaattttcttatgTCTCCTTCTTGTTATAAAGGTG AACTCAAGGGCTGATGGGGTGAGAATGAAAGGTTTGAAGTCTTTGTGTTT TGTAATACAAGATATGCCTTTAAGTTTTTCTTCGAGAATACTACATTCTT TGCAACAGAGACATTCTTCTAAAGTGAAATCGGTGCCAATTACACAGTTT CTACAAGTGCACCAATGCAAGTTCTCAAGTCTACTTGACTCCAGGTCATC ATTTTCCCGTTCGCTATCACTTGAAGACGAGCTTTCATCTTCCTTGTGCT TTGCTGACAGGATCGCTAGCTCTTTTTTTGAATACTCAGGTTCAAAACCA TAAAACCCTCCAATAGCTTCATC

Coding sequence (CDS) from alignment at sc0000001:2866590..2870262+

>TCONS_00000137 ID=TCONS_00000137|Name=TCONS_00000137|organism=Clytia hemisphaerica|type=CDS|length=4608bp|location=Sequence derived from alignment at sc0000001:2866590..2870262+ (Clytia hemisphaerica)
ATGGTATTGTGtcaagctttcggatgttcCAATAAATCGTCAGGGTCAAA
GGCTATAAAAGggaaatgttttttcaaaattcctgACCCAAAGAAAGAAC
GTGATAGATGTTCACGATGGCTACACAACATGGGAAATGCCAAATTGACT
ATCAACACTTTCGAAGCTGCTCGTCATCGAGTCTTATGCAGTGACCACTT
CCACTCGAAATGCTTTGAACGAGACTTGAAAGCTGAACTTTGTCCATTGT
ACAACACTAACGATGGACCTGCAAGGGCAAAACGTCTCATTGATGGGGCT
ATACCGACAATTTTTGACCATCAGGTATACGAACAAATTAACATGGATGG
AACTACAATCTCTTCAAGACAACCTAGAAAAAGAATCTCTGATATGGAGA
GAGCAGATGTTGTCAAGAAACTCCTGGTTGACTATGAACAATCCATTGAT
AAGGAGAGGATCGTAAATCAAGAAAATATCGAACCATCCGATACGAACGA
CGCACCTGAGGAGACAGTGAATCAAAACGAAAGTCCAATTGAAAAGGAGA
TAGTCGAAACCAGCAGTGACGTAAGAAAAACCAATGAAGTCGGTACACAA
ACGGAAGATATTCTATGGCCAACTTCGTCAAGTCCTATCAAAAATGCAAG
TCAAGATTCCATCTCCCAACCCGATCTCTCATTTGTTCACGATAAAGATG
ACCCTGATTATGAGCCTTCTGTCATCGAAAACTCTAACCGAGAAGAGGTG
AAAATCGATATTTTAAACGATGAAAAATTTGTCGTTTACGAAGGAATGCT
GGATCAACTTGTTTCATGCTTACGTTGCAAGGTTTGTGCACTACCTGTCG
AcgaaattaagaaaattaagcTAGGAACTAGTATTCACTATAAAATCTTT
TGTGACAACGAACATGTCATAATTGATTGGATGAGCCAACCATTGATTGG
GAAAATGCCTGCTTTTAATTTGTTGATTTCCGCCTCTGTATTTTTTTCTG
GATCGAATTTTGAAAGCATTAGAAAACCTGTGAGCTTTTCCGGACTGAAT
TTTGTAAATGCTAATACCTTCTACAAGATTCAACGTGTACTTGTAATACC
TAGTGTCAACCaagttttcaaacaaaatataGAGGAAGCAAGAgcagaaa
taaaaaccaaagcaGATCTTGAAATTGTAGGGGATGGTCGATTCGATTCA
CCAGGAAAATCAGCGAAGTACTGCACGTACACATGCCAATCACCCGAGAC
CAAAAAGATTATCGCCACCTCAACAGTCCAAACTTCAAAAGGCAAAGGCT
CTGCGCCTCTTGAACTTGaaggttttaaaaattgtttgaccGATTTAGAG
AGCAGTGGTTTCAAGGTTAAGAAGATAGCTACTGATAGGAACATGCAATT
GGCAAAATGGCTGAGAGAAAATCGTGCCCGTATAATCAGAAAGTATGATA
CCTGGCATTTTTCGAAGAATATCACTTCAAAATTGAGGAAAGTGTCTAAA
CGAAAAGGTTGCAAAGTAATCCAAGAGTGGATTTGAATGGTATTGTGtca
agctttcggatgttcCAATAAATCGTCAGGGTCAAAGGCTATAAAAGgga
aatgttttttcaaaattcctgACCCAAAGAAAGAACGTGATAGATGTTCA
CGATGGCTACACAACATGGGAAATGCCAAATTGACTATCAACACTTTCGA
AGCTGCTCGTCATCGAGTCTTATGCAGTGACCACTTCCACTCGAAATGCT
TTGAACGAGACTTGAAAGCTGAACTTTGTCCATTGTACAACACTAACGAT
GGACCTGCAAGGGCAAAACGTCTCATTGATGGGGCTATACCGACAATTTT
TGACCATCAGGTATACGAACAAATTAACATGGATGGAACTACAATCTCTT
CAAGACAACCTAGAAAAAGAATCTCTGATATGGAGAGAGCAGATGTTGTC
AAGAAACTCCTGGTTGACTATGAACAATCCATTGATAAGGAGAGGATCGT
AAATCAAGAAAATATCGAACCATCCGATACGAACGACGCACCTGAGGAGA
CAGTGAATCAAAACGAAAGTCCAATTGAAAAGGAGATAGTCGAAACCAGC
AGTGACGTAAGAAAAACCAATGAAGTCGGTACACAAACGGAAGATATTCT
ATGGCCAACTTCGTCAAGTCCTATCAAAAATGCAAGTCAAGATTCCATCT
CCCAACCCGATCTCTCATTTGTTCACGATAAAGATGACCCTGATTATGAG
CCTTCTGTCATCGAAAACTCTAACCGAGAAGAGGTGAAAATCGATATTTT
AAACGATGAAAAATTTGTCGTTTACGAAGGAATGCTGGATCAACTTGTTT
CATGCTTACGTTGCAAGGTTTGTGCACTACCTGTCGAcgaaattaagaaa
attaagcTAGGAACTAGTATTCACTATAAAATCTTTTGTGACAACGAACA
TGTCATAATTGATTGGATGAGCCAACCATTGATTGGGAAAATGCCTGCTT
TTAATTTGTTGATTTCCGCCTCTGTATTTTTTTCTGGATCGAATTTTGAA
AGCATTAGAAAACCTGTGAGCTTTTCCGGACTGAATTTTGTAAATGCTAA
TACCTTCTACAAGATTCAACGTGTACTTGTAATACCTAGTGTCAACCaag
ttttcaaacaaaatataGAGGAAGCAAGAgcagaaataaaaaccaaagca
GATCTTGAAATTGTAGGGGATGGTCGATTCGATTCACCAGGAAAATCAGC
GAAGTACTGCACGTACACATGCCAATCACCCGAGACCAAAAAGATTATCG
CCACCTCAACAGTCCAAACTTCAAAAGGCAAAGGCTCTGCGCCTCTTGAA
CTTGaaggttttaaaaattgtttgaccGATTTAGAGAGCAGTGGTTTCAA
GGTTAAGAAGATAGCTACTGATAGGAACATGCAATTGGCAAAATGGCTGA
GAGAAAATCGTGCCCGTATAATCAGAAAGTATGATACCTGGCATTTTTCG
AAGAATATCACTTCAAAATTGAGGAAAGTGTCTAAACGAAAAGGTTGCAA
AGTAATCCAAGAGTGGATTTGAATGGTATTGTGtcaagctttcggatgtt
cCAATAAATCGTCAGGGTCAAAGGCTATAAAAGggaaatgttttttcaaa
attcctgACCCAAAGAAAGAACGTGATAGATGTTCACGATGGCTACACAA
CATGGGAAATGCCAAATTGACTATCAACACTTTCGAAGCTGCTCGTCATC
GAGTCTTATGCAGTGACCACTTCCACTCGAAATGCTTTGAACGAGACTTG
AAAGCTGAACTTTGTCCATTGTACAACACTAACGATGGACCTGCAAGGGC
AAAACGTCTCATTGATGGGGCTATACCGACAATTTTTGACCATCAGGTAT
ACGAACAAATTAACATGGATGGAACTACAATCTCTTCAAGACAACCTAGA
AAAAGAATCTCTGATATGGAGAGAGCAGATGTTGTCAAGAAACTCCTGGT
TGACTATGAACAATCCATTGATAAGGAGAGGATCGTAAATCAAGAAAATA
TCGAACCATCCGATACGAACGACGCACCTGAGGAGACAGTGAATCAAAAC
GAAAGTCCAATTGAAAAGGAGATAGTCGAAACCAGCAGTGACGTAAGAAA
AACCAATGAAGTCGGTACACAAACGGAAGATATTCTATGGCCAACTTCGT
CAAGTCCTATCAAAAATGCAAGTCAAGATTCCATCTCCCAACCCGATCTC
TCATTTGTTCACGATAAAGATGACCCTGATTATGAGCCTTCTGTCATCGA
AAACTCTAACCGAGAAGAGGTGAAAATCGATATTTTAAACGATGAAAAAT
TTGTCGTTTACGAAGGAATGCTGGATCAACTTGTTTCATGCTTACGTTGC
AAGGTTTGTGCACTACCTGTCGAcgaaattaagaaaattaagcTAGGAAC
TAGTATTCACTATAAAATCTTTTGTGACAACGAACATGTCATAATTGATT
GGATGAGCCAACCATTGATTGGGAAAATGCCTGCTTTTAATTTGTTGATT
TCCGCCTCTGTATTTTTTTCTGGATCGAATTTTGAAAGCATTAGAAAACC
TGTGAGCTTTTCCGGACTGAATTTTGTAAATGCTAATACCTTCTACAAGA
TTCAACGTGTACTTGTAATACCTAGTGTCAACCaagttttcaaacaaaat
ataGAGGAAGCAAGAgcagaaataaaaaccaaagcaGATCTTGAAATTGT
AGGGGATGGTCGATTCGATTCACCAGGAAAATCAGCGAAGTACTGCACGT
ACACATGCCAATCACCCGAGACCAAAAAGATTATCGCCACCTCAACAGTC
CAAACTTCAAAAGGCAAAGGCTCTGCGCCTCTTGAACTTGaaggttttaa
aaattgtttgaccGATTTAGAGAGCAGTGGTTTCAAGGTTAAGAAGATAG
CTACTGATAGGAACATGCAATTGGCAAAATGGCTGAGAGAAAATCGTGCC
CGTATAATCAGAAAGTATGATACCTGGCATTTTTCGAAGAATATCACTTC
AAAATTGAGGAAAGTGTCTAAACGAAAAGGTTGCAAAGTAATCCAAGAGT
GGATTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000077XLOC_000077Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000137-proteinTCONS_00000137-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00000137-exon-sc0000001-1491911889:2866590..2866933TCONS_00000137-exon-sc0000001-1491911889:2866590..2866933Clytia hemisphaericaexon
TCONS_00000137-exon-sc0000001-1510915933:2866590..2866933TCONS_00000137-exon-sc0000001-1510915933:2866590..2866933Clytia hemisphaericaexon
TCONS_00000137-exon-sc0000001-1575043694:2866590..2866933TCONS_00000137-exon-sc0000001-1575043694:2866590..2866933Clytia hemisphaericaexon
TCONS_00000137-exon-sc0000001-1491911889:2867014..2867292TCONS_00000137-exon-sc0000001-1491911889:2867014..2867292Clytia hemisphaericaexon
TCONS_00000137-exon-sc0000001-1510915933:2867014..2867292TCONS_00000137-exon-sc0000001-1510915933:2867014..2867292Clytia hemisphaericaexon
TCONS_00000137-exon-sc0000001-1575043694:2867014..2867292TCONS_00000137-exon-sc0000001-1575043694:2867014..2867292Clytia hemisphaericaexon
TCONS_00000137-exon-sc0000001-1491911889:2867646..2870262TCONS_00000137-exon-sc0000001-1491911889:2867646..2870262Clytia hemisphaericaexon
TCONS_00000137-exon-sc0000001-1510915933:2867646..2870262TCONS_00000137-exon-sc0000001-1510915933:2867646..2870262Clytia hemisphaericaexon
TCONS_00000137-exon-sc0000001-1575043694:2867646..2870262TCONS_00000137-exon-sc0000001-1575043694:2867646..2870262Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2866590..2870262 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.222394 0.195884 0.185541 0.237569 0.491887 0.18279 0.689481 0.685595 0.541662 0.922838 0.0709701 0.760376 0.446129 0.622052 0.257147 0.465656 0.639765 1.31469 1.58184 1.56423 0.764817 0.935959 0.513911 0.607201 0.806095 0.492296 1.26105 1.10736 0.261686 0.0874029
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006612Znf_C2CH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000137 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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