TCONS_00000137-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000137-protein
Unique NameTCONS_00000137-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length511

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000137-protein ID=TCONS_00000137-protein|Name=TCONS_00000137-protein|organism=Clytia hemisphaerica|type=polypeptide|length=511bp
MVLCQAFGCSNKSSGSKAIKGKCFFKIPDPKKERDRCSRWLHNMGNAKLT
INTFEAARHRVLCSDHFHSKCFERDLKAELCPLYNTNDGPARAKRLIDGA
IPTIFDHQVYEQINMDGTTISSRQPRKRISDMERADVVKKLLVDYEQSID
KERIVNQENIEPSDTNDAPEETVNQNESPIEKEIVETSSDVRKTNEVGTQ
TEDILWPTSSSPIKNASQDSISQPDLSFVHDKDDPDYEPSVIENSNREEV
KIDILNDEKFVVYEGMLDQLVSCLRCKVCALPVDEIKKIKLGTSIHYKIF
CDNEHVIIDWMSQPLIGKMPAFNLLISASVFFSGSNFESIRKPVSFSGLN
FVNANTFYKIQRVLVIPSVNQVFKQNIEEARAEIKTKADLEIVGDGRFDS
PGKSAKYCTYTCQSPETKKIIATSTVQTSKGKGSAPLELEGFKNCLTDLE
SSGFKVKKIATDRNMQLAKWLRENRARIIRKYDTWHFSKNITSKLRKVSK
RKGCKVIQEWI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000077XLOC_000077Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000137TCONS_00000137Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006612Znf_C2CH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006612Zinc finger, C2CH-typeSMARTSM00692dm3coord: 24..110
e-value: 1.7E-7
score: 40.9
IPR006612Zinc finger, C2CH-typeSMARTSM00980THAP_2coord: 2..111
e-value: 1.2E-8
score: 44.7
IPR006612Zinc finger, C2CH-typePFAMPF05485THAPcoord: 4..105
e-value: 8.5E-11
score: 42.6
IPR006612Zinc finger, C2CH-typePROSITEPS50950ZF_THAPcoord: 1..105
score: 17.658
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..182
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 1..106

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00000137-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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