XLOC_000077 (gene) - C. hemisphaerica

Overview
NameXLOC_000077
Unique NameXLOC_000077
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2866590..2870262+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000077 ID=XLOC_000077|Name=XLOC_000077|organism=Clytia hemisphaerica|type=gene|length=3673bp|location=Sequence derived from alignment at sc0000001:2866590..2870262+ (Clytia hemisphaerica)
ttcatattgattgaattatcattgtttaaaatatctctttatttgaaagt
aagagGGTTTCGTGACGTCAGCGCCGAACTTTCATTTCGATAGAGAAACT
GTTTGTAGACAAAAATTATGGAAAGAAGATGTTTTAtagcaaaatataat
tttgatgtacGTAGACGTAGAgatgttttgagaaaaatgtaaTTAGAAGA
ACGAACTTGAAAGATATGGTATTGTGtcaagctttcggatgttcCAATAA
ATCGTCAGGGTCAAAGGCTATAAAAGggaaatgttttttcaaaattcctg
ACCCAAAGAAAGAACGTGATAGATGTTCACGATGGCTACACAACATGGGA
AATGCCCAATTGACTATCAATACTTTCGAAGCTGCTCGTCATCGAGTCTT
ATGCAGTGACAACTTCCACTCANCATGGGAAATGCCAAATTGACTATCAA
CACTTTCGAAGCTGCTCGTCATCGAGTCTTATGCAGTGACCACTTCCACT
CGAAATGCTTTGAACGAGACTTGAAAGCTGAACTTTGTCCATTGTACAAC
ACTAACGATGGACCTGCAAGGGCAAAACGTCTCATTGATGGGGCTATACC
GACAATTTTTGACCATCAGGTATACGAACAAATTAACATGGATGGAACTA
CAATCTCTTCAAGACAACCTAGAAAAAGAATCTCTGATATGGAGAGAGCA
GATGTAAGTAGACAGTTTCCATTTAAACAAcagaaattttggaaaagtta
TAAAATATGGTTTTCCAAGCCCTTTGACAAGTCTTCCTTTTgacttttga
caattttcatCTTTAACAAGATATAAGCCTCATGTCAGGGTCAAGAGCAT
ggtcaacctcgtccccgtgtatcccaggctttatttatgttactgattga
cgccagagaatattatctagcgctatcagtaagcatcaaaaagctgataa
tgcgcagggaacgagttTGGAGCATGGTAAGAAAGATActaagacagggg
tgtatattgCAACAATCGATCAACACTATAAACTTGATTCTACATTTTGG
TTTAAGGTTGTCAAGAAACTCCTGGTTGACTATGAACAATCCATTGATAA
GGAGAGGATCGTAAATCAAGAAAATATCGAACCATCCGATACGAACGACG
CACCTGAGGAGACAGTGAATCAAAACGAAAGTCCAATTGAAAAGGAGATA
GTCGAAACCAGCAGTGACGTAAGAAAAACCAATGAAGTCGGTACACAAAC
GGAAGATATTCTATGGCCAACTTCGTCAAGTCCTATCAAAAATGCAAGTC
AAGATTCCATCTCCCAACCCGATCTCTCATTTGTTCACGATAAAGATGAC
CCTGATTATGAGCCTTCTGTCATCGAAAACTCTAACCGAGAAGAGGTGAA
AATCGATATTTTAAACGATGAAAAATTTGTCGTTTACGAAGGAATGCTGG
ATCAACTTGTTTCATGCTTACGTTGCAAGGTTTGTGCACTACCTGTCGAc
gaaattaagaaaattaagcTAGGAACTAGTATTCACTATAAAATCTTTTG
TGACAACGAACATGTCATAATTGATTGGATGAGCCAACCATTGATTGGGA
AAATGCCTGCTTTTAATTTGTTGATTTCCGCCTCTGTATTTTTTTCTGGA
TCGAATTTTGAAAGCATTAGAAAACCTGTGAGCTTTTCCGGACTGAATTT
TGTAAATGCTAATACCTTCTACAAGATTCAACGTGTACTTGTAATACCTA
GTGTCAACCaagttttcaaacaaaatataGAGGAAGCAAGAgcagaaata
aaaaccaaagcaGATCTTGAAATTGTAGGGGATGGTCGATTCGATTCACC
AGGAAAATCAGCGAAGTACTGCACGTACACATGCCAATCACCCGAGACCA
AAAAGATTATCGCCACCTCAACAGTCCAAACTTCAAAAGGCAAAGGCTCT
GCGCCTCTTGAACTTGaaggttttaaaaattgtttgaccGATTTAGAGAG
CAGTGGTTTCAAGGTTAAGAAGATAGCTACTGATAGGAACATGCAATTGG
CAAAATGGCTGAGAGAAAATCGTGCCCGTATAATCAGAAAGTATGATACC
TGGCATTTTTCGAAGAATATCACTTCAAAATTGAGGAAAGTGTCTAAACG
AAAAGGTTGCAAAGTAATCCAAGAGTGGATTTGACAGATCGGAAATCACC
TATTTTGGTGTGCCGAAAATTGTAAGGGAGATGCTGAAACCTTGAAGCAA
ATGTGGAAATCTCTGTTGCACCACGTCACAAATCGTCATCGATTTAAGAG
GGCTTACCCCAAATACCCCAAGTGCTGCCATAAATCATTGAAAAGGAAGG
AGACTGCACAGAAAAAATGGATCGTGAAAGATTCGGTAGCGTATGATGCA
TTAGAAAATGTCGTGACAGAAAGCAAAACCCTCAATGACATGGATCATCT
CGTCAATCCATTACACACCGGGAGTATCGAAGTATTCCATTCGCTCGTTA
ATTCTTACACCCCAAAAAGATTGGAATTTGAGCTGAACGTGATGGATGCA
CGGGTGAAAGTAGCCGTAATTGATCACAATAGCAACGTGGGCAGGCAGCA
AGCAGTCATTACCTCCGAGCGTAAAGGATCAGGGAAAAAGGGAGAAAAAC
AGTGGAAAATCGTCTCTTCAAAGTTGTCAAAAGATTGGGTGGCCAAAGAG
AAGAAGGAAGCAAAGTCTTACGATTTCGTGAAAACACTTTTAACTGAGGT
tataaaaaggaaagaaaaaggaGAGAAGATTGACCAAAAAGCCTCTGAAT
TAGCGAATAGACTCGTAAGCCCAAAAAACATTGCATTTACAGAACGTCCA
GAAAGACAATTGGTTTtggaaaaacatttcaaaattccttttatattata
tatctATCTATACTGTATCTTCACAAAAGATTATAAGTCTAGTTGCTCAA
TGAAGCTCTTTTGAAACCAGTATATTTTCCACCAATAGACTCAGGGAAcg
tgttttttatttctttcacgACACAAGATGGGATCACCACTCTTTTGTCA
CGCCCAAGTATTTCGAAATAATGTGTCCACGATGTGTATTGGTAATACGC
AGTGTAACGATATTGCCtgtagaaataaaagaaaacaaagactGGTTTTC
TATTTGAACTCTTGCCTAGAATTGATTCAATAAATTTATTTAGAATCTTC
ATTTTGCTAGATTTACAAACTATTTTTATAGATTTACGAACTATTTTACG
ATCTATGATGTATTAAGTAAAACCCAATCAAATTTacctgtttttaattt
ttttgattcttttgaaaattttcttatgTCTCCTTCTTGTTATAAAGGTG
AACTCAAGGGCTGATGGGGTGAGAATGAAAGGTTTGAAGTCTTTGTGTTT
TGTAATACAAGATATGCCTTTAAGTTTTTCTTCGAGAATACTACATTCTT
TGCAACAGAGACATTCTTCTAAAGTGAAATCGGTGCCAATTACACAGTTT
CTACAAGTGCACCAATGCAAGTTCTCAAGTCTACTTGACTCCAGGTCATC
ATTTTCCCGTTCGCTATCACTTGAAGACGAGCTTTCATCTTCCTTGTGCT
TTGCTGACAGGATCGCTAGCTCTTTTTTTGAATACTCAGGTTCAAAACCA
TAAAACCCTCCAATAGCTTCATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000137TCONS_00000137Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000137-proteinTCONS_00000137-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2866590..2870262 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22	0.2	0.19	0.24	0.49	0.18	0.69	0.69	0.54	0.92	0.07	0.76	0.45	0.62	0.26	0.47	0.64	1.31	1.58	1.56	0.76	0.94	0.51	0.61	0.81	0.49	1.26	1.11	0.26	0.09