TCONS_00073720-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073720-protein
Unique NameTCONS_00073720-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073720-protein ID=TCONS_00073720-protein|Name=TCONS_00073720-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
MKFELAFLVLAQLVLLYGQQREKKIKKKGGLNLKKLSKLENDAVLHGYAE
SYEFCQQNFKYEPWNCPKPQAVKNAKHPISFTDIYEHATKEASYIYSIVA
AGVTHYVIRACQQGKDRNCQCKSKKPKNGLGAPVVMCQSIIDHGTKRARR
ILKQMDFKKVSDPVRKAFNWKNAASGLQVYRQLMPRECRCSGVSGHCTAT
VCWEATPPSLKVPAQQLKQLYNKAVKIKPTEIEKPFFPTKNPNRSRPARN
LVNDTKLIYITDSPSYCKPNPLLGLPGTLNRECDHTQDNSCNKLCSKCGY
RKHSVVKKHINTKCNCKFHWCCKVTCDTCIERRLVTKCYLPSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045775XLOC_045775Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073720TCONS_00073720Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005817Wnt
Vocabulary: Molecular Function
TermDefinition
GO:0005102receptor binding
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0016055Wnt signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016055 Wnt signaling pathway
cellular_component GO:0005576 extracellular region
molecular_function GO:0005102 receptor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005817WntPRINTSPR01349WNTPROTEINcoord: 189..203
score: 53.28
coord: 256..267
score: 49.8
coord: 109..122
score: 41.45
coord: 90..104
score: 41.97
IPR005817WntSMARTSM00097wnt1_3coord: 27..339
e-value: 1.2E-22
score: 79.0
IPR005817WntPFAMPF00110wntcoord: 42..338
e-value: 5.6E-63
score: 213.2

Blast
BLAST of TCONS_00073720-protein vs. Swiss-Prot (Human)
Match: WNT7B (Protein Wnt-7b OS=Homo sapiens GN=WNT7B PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 7.032e-45
Identity = 98/294 (33.33%), Postives = 138/294 (46.94%), Query Frame = 0
Query:   55 CQQNFKYEPWNCPKPQAVKNAKHPISFTDIYEHATKEASYIYSIVAAGVTHYVIRACQQGKDRNCQCKSKKP---KNGLGAPVVMCQSIIDHGTKRARRILKQMDFKKVSDPVRKAFNWKNAASGLQVYRQLMPRECRCSGVSGHCTATVCWEATPPSLKVPAQQLKQLYNKAVKI---KPTEIEKPFFPTKNPNRS--RPARNLVNDTKLIYITDSPSYCKPNPLLGLPGTLNRECDHTQ--DNSCNKLCSKCGYRKHSVVKKHINTKCNCKFHWCCKVTCDTCIERRLVTKC 338
            CQ  F++  WNC              F       ++EA++ Y+I AAGV H V  AC QG   NC C  +K        G     C + + +G   +RR +   D +++    R+  N  N  +G +V    M  EC+C GVSG CT   CW  T P  +     LK+ YN AV++   + + + +P F      RS  +P      +T L+YI  SP+YC+ +   G  GT  R C+ T    + C+ +C   GY  H   K     +CNCKFHWCC V C+TC ER  V  C
Sbjct:   73 CQYQFRFGRWNCSA------LGEKTVFGQELRVGSREAAFTYAITAAGVAHAVTAACSQGNLSNCGCDREKQGYYNQAEGWKWGGCSADVRYGIDFSRRFV---DAREIKKNARRLMNLHNNEAGRKVLEDRMQLECKCHGVSGSCTTKTCW-TTLPKFREVGHLLKEKYNAAVQVEVVRASRLRQPTFLRIKQLRSYQKPM-----ETDLVYIEKSPNYCEEDAATGSVGTQGRLCNRTSPGADGCDTMCCGRGYNTHQYTKVW---QCNCKFHWCCFVKCNTCSERTEVFTC 348          
The following BLAST results are available for this feature:
BLAST of TCONS_00073720-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WNT7B7.032e-4533.33Protein Wnt-7b OS=Homo sapiens GN=WNT7B PE=2 SV=2[more]
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