Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00073495-protein ID=TCONS_00073495-protein|Name=TCONS_00073495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term Definition
GO:0055085 transmembrane transport
Vocabulary: Cellular Component
Term Definition
GO:0016021 integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0055085 transmembrane transport
cellular_component
GO:0016021 integral component of membrane
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 400 450 500 Expect = 1.0E-18 / Score = 66.8 Expect = 1.0E-19 / Score = 70.1 Expect = 6.2E-25 / Score = 87.8 Score = 12.611 Expect = 4.90187E-24 / Score = 100.851 Score = Sequence G3DSA:1.20.1250.20 G3DSA:1.20.1250.20 PF07690 PS50850 cd06174 SSF103473
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available GENE3D 1.20.1250.20 coord: 41..261 None No IPR available GENE3D 1.20.1250.20 coord: 262..498 IPR011701 Major facilitator superfamily PFAM PF07690 MFS_1 coord: 95..424 IPR020846 Major facilitator superfamily domain PROSITE PS50850 MFS coord: 49..473 IPR020846 Major facilitator superfamily domain CDD cd06174 MFS coord: 97..465 IPR020846 Major facilitator superfamily domain SUPERFAMILY 103473 MFS general substrate transporter coord: 46..470
Blast
BLAST of TCONS_00073495-protein vs. Swiss-Prot (Human)
Match:
MFSD1 (Major facilitator superfamily domain-containing protein 1 OS=Homo sapiens GN=MFSD1 PE=2 SV=2)
HSP 1 Score: 202.986 bits (515), Expect = 2.166e-59
Identity = 137/392 (34.95%), Postives = 199/392 (50.77%), Query Frame = 0
Query: 57 CLLTFGSYFCFDMPSVLQDSFTGTYGINCTTNSHNVTKCEEHLGMTETEYNLLYTVYAWMNALVVIGSGIFIDKV-GQRVGAVFFSALCVVGSAIFASGYFLKGRGSMLVLFLTGRLLFGAGNGSLTIAQNRISAYWFEGKELAFAFGATLSFSRLGSILNF----FLTKDFSQTYG------LKWTLWGGVFLCILGFGGALVLYVLDKNGMEQIAQREPGAKKSRKMKVGDIRHLSLQFVLLAVTTMSFYNTVFPFVADASQFIREKYHYSDDSEMPSYYAGSVYDVSLVATPILGIIVDYLGYRGLLAFVCAIF-TIPVYLILAFTTWHPLYGTVLLGLTYSAAATSLWPSAPLVVNPGVLGTALGLMTSLQMIGIGVCSLVVGAILDK 436
C L FGSYFC+D P+ LQ T+ + + + T++ LLY Y+W N ++ G ID+V G R G + FS +G +FA G G + L GR +FG G SL +AQN + WF+GKEL FG LS +R+GS +N +L G L TL G CIL AL L LD+ E+I +E G K +K+ D++ SL L+ + + +Y VFPF+ F EK+ +S S+ S VY +S +P+ G++VD G + ++ +CA+ T+ +++LAFT W+P LLGL+YS A +LWP VV LGTA G M S+Q +G+ + S++ G ILD
Sbjct: 50 CFLGFGSYFCYDNPAALQ------------------TQVKRDMQVNTTKFMLLYAWYSWPNVVLCFFGGFLIDRVFGIRWGTIIFSCFVCIGQVVFALG----GIFNAFWLMEFGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKIEALLGSAGHTTLGITLMIGGITCILSLICALALAYLDQRA-ERILHKEQG-KTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFS--SQAASAINSVVYVISAPMSPVFGLLVDKTG-KNIIWVLCAVAATLVSHMMLAFTMWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAIISIIAGMILDS 414
The following BLAST results are available for this feature:
BLAST of TCONS_00073495-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
K N F N L E S P S K V C R N S R Q K K V N L H A R M A E E I N F A G E S A H W C L N A N K G Y Y R F L V L F F N C L L T F G S Y F C F D M P S V L Q D S F T G T Y G I N C T T N S H N V T K C E E H L G M T E T E Y N L L Y T V Y A W M N A L V V I G S G I F I D K V G Q R V G A V F F S A L C V V G S A I F A S G Y F L K G R G S M L V L F L T G R L L F G A G N G S L T I A Q N R I S A Y W F E G K E L A F A F G A T L S F S R L G S I L N F F L T K D F S Q T Y G L K W T L W G G V F L C I L G F G G A L V L Y V L D K N G M E Q I A Q R E P G A K K S R K M K V G D I R H L S L Q F V L L A V T T M S F Y N T V F P F V A D A S Q F I R E K Y H Y S D D S E M P S Y Y A G S V Y D V S L V A T P I L G I I V D Y L G Y R G L L A F V C A I F T I P V Y L I L A F T T W H P L Y G T V L L G L T Y S A A A T S L W P S A P L V V N P G V L G T A L G L M T S L Q M I G I G V C S L V V G A I L D K L K T N D H K W E Y V M I F L L A N A V L C V I S A L F L N I V D W R R S G I L N K T K K R N S Q K M K K L T E S R E A L V G D A A E G D G D S I N 50 100 150 200 250 300 350 400 450 500 Expect = 2.17e-59 / Id = 34.95 Sequence MFSD1
Match Name E-value Identity Description
MFSD1 2.166e-59 34.95 Major facilitator superfamily domain-containing pr... [more]
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