TCONS_00073495-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073495-protein
Unique Name	TCONS_00073495-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	510

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073495-protein ID=TCONS_00073495-protein|Name=TCONS_00073495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
KNFNLESPSKVCRNSRQKKVNLHARMAEEINFAGESAHWCLNANKGYYRF
LVLFFNCLLTFGSYFCFDMPSVLQDSFTGTYGINCTTNSHNVTKCEEHLG
MTETEYNLLYTVYAWMNALVVIGSGIFIDKVGQRVGAVFFSALCVVGSAI
FASGYFLKGRGSMLVLFLTGRLLFGAGNGSLTIAQNRISAYWFEGKELAF
AFGATLSFSRLGSILNFFLTKDFSQTYGLKWTLWGGVFLCILGFGGALVL
YVLDKNGMEQIAQREPGAKKSRKMKVGDIRHLSLQFVLLAVTTMSFYNTV
FPFVADASQFIREKYHYSDDSEMPSYYAGSVYDVSLVATPILGIIVDYLG
YRGLLAFVCAIFTIPVYLILAFTTWHPLYGTVLLGLTYSAAATSLWPSAP
LVVNPGVLGTALGLMTSLQMIGIGVCSLVVGAILDKLKTNDHKWEYVMIF
LLANAVLCVISALFLNIVDWRRSGILNKTKKRNSQKMKKLTESREALVGD
AAEGDGDSIN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045617	XLOC_045617	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073495	TCONS_00073495	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 41..261 e-value: 1.0E-18 score: 66.8
None	No IPR available	GENE3D	1.20.1250.20		coord: 262..498 e-value: 1.0E-19 score: 70.1
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 95..424 e-value: 6.2E-25 score: 87.8
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 49..473 score: 12.611
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 97..465 e-value: 4.90187E-24 score: 100.851
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 46..470

Blast

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BLAST of TCONS_00073495-protein vs. Swiss-Prot (Human)
Match: MFSD1 (Major facilitator superfamily domain-containing protein 1 OS=Homo sapiens GN=MFSD1 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 2.166e-59
Identity = 137/392 (34.95%), Postives = 199/392 (50.77%), Query Frame = 0

Query:   57 CLLTFGSYFCFDMPSVLQDSFTGTYGINCTTNSHNVTKCEEHLGMTETEYNLLYTVYAWMNALVVIGSGIFIDKV-GQRVGAVFFSALCVVGSAIFASGYFLKGRGSMLVLFLTGRLLFGAGNGSLTIAQNRISAYWFEGKELAFAFGATLSFSRLGSILNF----FLTKDFSQTYG------LKWTLWGGVFLCILGFGGALVLYVLDKNGMEQIAQREPGAKKSRKMKVGDIRHLSLQFVLLAVTTMSFYNTVFPFVADASQFIREKYHYSDDSEMPSYYAGSVYDVSLVATPILGIIVDYLGYRGLLAFVCAIF-TIPVYLILAFTTWHPLYGTVLLGLTYSAAATSLWPSAPLVVNPGVLGTALGLMTSLQMIGIGVCSLVVGAILDK 436
            C L FGSYFC+D P+ LQ                  T+ +  + +  T++ LLY  Y+W N ++    G  ID+V G R G + FS    +G  +FA G    G  +   L   GR +FG G  SL +AQN  +  WF+GKEL   FG  LS +R+GS +N     +L        G      L  TL  G   CIL    AL L  LD+   E+I  +E G K    +K+ D++  SL   L+ +  + +Y  VFPF+     F  EK+ +S  S+  S     VY +S   +P+ G++VD  G + ++  +CA+  T+  +++LAFT W+P     LLGL+YS  A +LWP    VV    LGTA G M S+Q +G+ + S++ G ILD 
Sbjct:   50 CFLGFGSYFCYDNPAALQ------------------TQVKRDMQVNTTKFMLLYAWYSWPNVVLCFFGGFLIDRVFGIRWGTIIFSCFVCIGQVVFALG----GIFNAFWLMEFGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKIEALLGSAGHTTLGITLMIGGITCILSLICALALAYLDQRA-ERILHKEQG-KTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFS--SQAASAINSVVYVISAPMSPVFGLLVDKTG-KNIIWVLCAVAATLVSHMMLAFTMWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAIISIIAGMILDS 414

The following BLAST results are available for this feature:

BLAST of TCONS_00073495-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073495-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MFSD1	2.166e-59	34.95	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00073495-protein (polypeptide) - C. hemisphaerica