Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00073362-protein ID=TCONS_00073362-protein|Name=TCONS_00073362-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0008270 zinc ion binding GO:0003713 transcription coactivator activity GO:0003677 DNA binding
Vocabulary: Biological Process
Term Definition
GO:0035065 regulation of histone acetylation GO:0006357 regulation of transcription from RNA polymerase II promoter
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0035065 regulation of histone acetylation
biological_process
GO:0006357 regulation of transcription from RNA polymerase II promoter
molecular_function
GO:0003677 DNA binding
molecular_function
GO:0003713 transcription coactivator activity
molecular_function
GO:0008270 zinc ion binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 400 Score = Expect = 7.4E-12 / Score = 44.6 Score = Expect = 4.53303E-20 / Score = 82.3404 Expect = 6.17214E-10 / Score = 53.7334 Score = Expect = 1.1E-7 / Score = 41.5 Expect = 3.0E-8 / Score = 33.2 Score = 10.43 Expect = 6.1E-9 / Score = 45.7 Expect = 2.5E-10 / Score = 40.3 Expect = 3.5E-108 / Score = 360.7 Score = 18.651 Score = Score = Sequence Coil G3DSA:1.10.10.60 mobidb-lite cd02335 cd00167 SSF57850 SM00291 PF00569 PS50135 SM00717 PF00249 PIRSF025024 PS51293 SSF46689 SSF46689
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 310..330 None No IPR available GENE3D 1.10.10.60 coord: 76..126 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 315..352 None No IPR available CDD cd02335 ZZ_ADA2 coord: 22..69 None No IPR available CDD cd00167 SANT coord: 81..123 None No IPR available SUPERFAMILY 57850 RING/U-box coord: 21..84 IPR000433 Zinc finger, ZZ-type SMART SM00291 zz_5 coord: 18..62 IPR000433 Zinc finger, ZZ-type PFAM PF00569 ZZ coord: 20..61 IPR000433 Zinc finger, ZZ-type PROSITE PS50135 ZF_ZZ_2 coord: 18..64 IPR001005 SANT/Myb domain SMART SM00717 sant coord: 77..126 IPR001005 SANT/Myb domain PFAM PF00249 Myb_DNA-binding coord: 81..120 IPR016827 Transcriptional adaptor 2 PIRSF PIRSF025024 Txn_adaptor_ADA2 coord: 8..444 IPR017884 SANT domain PROSITE PS51293 SANT coord: 76..128 IPR009057 Homeobox domain-like SUPERFAMILY 46689 Homeodomain-like coord: 79..127 IPR009057 Homeobox domain-like SUPERFAMILY 46689 Homeodomain-like coord: 369..443
Blast
BLAST of TCONS_00073362-protein vs. Swiss-Prot (Human)
Match:
TAD2B (Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2)
HSP 1 Score: 330.487 bits (846), Expect = 5.405e-110
Identity = 177/438 (40.41%), Postives = 265/438 (60.50%), Query Frame = 0
Query: 20 AKYHCNYCHADCSGLRVSCAECPDFDACIQCFASGAEMGNHKRGHDYHLIDNGTFYL----IVKGWTADEEMLLLDAIEQHGLGNWDDISDHVG-TKSPQEAQDHFEEVYLKKNIGKVTLPKSVSH-IPDHASVEG-QLSPTLLKPMESLDLPVAEQQELGYMMFRDDFEREYDNDAENLIKTLVCSRDDDELETALKLQLADMYWRVLHERSRWKKIARDYGLITS------KHRLIASRRKLSKEDREFKDKIRPFAQFVQPQQWEELVNNRIRERELKARIKELTKYRRYGIKKLTGCQEYEDLKTQRERKKENRKRMQVISPPRTTKTSGK-KEFSSDDSRKKDDIDIATKEFEEFKEKMSSDTSFQLLSDKEKHLCATVQLRCSRYMTLKSYLLNEYASSRMKIPHKTKPPHYLTPSLRLALQEFFIQCGWIS 443
K +C YC A+ S LR C EC D + C +CF++GAE+G+H+R H Y L+D G F L GWT+ EE LLLDAIEQ G GNW+D++ HVG +++PQE +H+ +Y+ N+GK +P ++ + + DH G LSP+L P+ LD+ VAEQQ+LGYM RDD+E EYD DAE LI L + DDD++E LK DMY R L ER R K IARDY L+ + K + A +RK++KE++E + K+RP QF+ +++++L N +E+ L+A+I+EL +YRR GI K+ EYE + +RE++KEN+ ++ + K GK EF++ + + F+LLSD+EK LC+++ L +RY+T+K+ ++ ++ R IP K++ P YL L+ + F + GWIS
Sbjct: 5 GKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKN----LAGSKRGKEDGKDSEFAA----------------------IENLPGFELLSDREKVLCSSLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESGWIS 416
The following BLAST results are available for this feature:
BLAST of TCONS_00073362-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M S G T L T T K M A A G N S S A T D G A K Y H C N Y C H A D C S G L R V S C A E C P D F D A C I Q C F A S G A E M G N H K R G H D Y H L I D N G T F Y L I V K G W T A D E E M L L L D A I E Q H G L G N W D D I S D H V G T K S P Q E A Q D H F E E V Y L K K N I G K V T L P K S V S H I P D H A S V E G Q L S P T L L K P M E S L D L P V A E Q Q E L G Y M M F R D D F E R E Y D N D A E N L I K T L V C S R D D D E L E T A L K L Q L A D M Y W R V L H E R S R W K K I A R D Y G L I T S K H R L I A S R R K L S K E D R E F K D K I R P F A Q F V Q P Q Q W E E L V N N R I R E R E L K A R I K E L T K Y R R Y G I K K L T G C Q E Y E D L K T Q R E R K K E N R K R M Q V I S P P R T T K T S G K K E F S S D D S R K K D D I D I A T K E F E E F K E K M S S D T S F Q L L S D K E K H L C A T V Q L R C S R Y M T L K S Y L L N E Y A S S R M K I P H K T K P P H Y L T P S L R L A L Q E F F I Q C G W I S E 50 100 150 200 250 300 350 400 Expect = 5.41e-110 / Id = 40.41 Sequence TAD2B
Match Name E-value Identity Description
TAD2B 5.405e-110 40.41 Transcriptional adapter 2-beta OS=Homo sapiens GN=... [more]
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