TCONS_00073362-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073362-protein
Unique NameTCONS_00073362-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073362-protein ID=TCONS_00073362-protein|Name=TCONS_00073362-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MSGTLTTKMAAGNSSATDGAKYHCNYCHADCSGLRVSCAECPDFDACIQC
FASGAEMGNHKRGHDYHLIDNGTFYLIVKGWTADEEMLLLDAIEQHGLGN
WDDISDHVGTKSPQEAQDHFEEVYLKKNIGKVTLPKSVSHIPDHASVEGQ
LSPTLLKPMESLDLPVAEQQELGYMMFRDDFEREYDNDAENLIKTLVCSR
DDDELETALKLQLADMYWRVLHERSRWKKIARDYGLITSKHRLIASRRKL
SKEDREFKDKIRPFAQFVQPQQWEELVNNRIRERELKARIKELTKYRRYG
IKKLTGCQEYEDLKTQRERKKENRKRMQVISPPRTTKTSGKKEFSSDDSR
KKDDIDIATKEFEEFKEKMSSDTSFQLLSDKEKHLCATVQLRCSRYMTLK
SYLLNEYASSRMKIPHKTKPPHYLTPSLRLALQEFFIQCGWISE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045517XLOC_045517Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073362TCONS_00073362Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ
IPR001005SANT/Myb
IPR016827Ada2/TADA2
IPR017884SANT_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003713transcription coactivator activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0035065regulation of histone acetylation
GO:0006357regulation of transcription from RNA polymerase II promoter
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035065 regulation of histone acetylation
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
molecular_function GO:0003677 DNA binding
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 310..330
NoneNo IPR availableGENE3D1.10.10.60coord: 76..126
e-value: 7.4E-12
score: 44.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..352
NoneNo IPR availableCDDcd02335ZZ_ADA2coord: 22..69
e-value: 4.53303E-20
score: 82.3404
NoneNo IPR availableCDDcd00167SANTcoord: 81..123
e-value: 6.17214E-10
score: 53.7334
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 21..84
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 18..62
e-value: 1.1E-7
score: 41.5
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 20..61
e-value: 3.0E-8
score: 33.2
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 18..64
score: 10.43
IPR001005SANT/Myb domainSMARTSM00717santcoord: 77..126
e-value: 6.1E-9
score: 45.7
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 81..120
e-value: 2.5E-10
score: 40.3
IPR016827Transcriptional adaptor 2PIRSFPIRSF025024Txn_adaptor_ADA2coord: 8..444
e-value: 3.5E-108
score: 360.7
IPR017884SANT domainPROSITEPS51293SANTcoord: 76..128
score: 18.651
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 79..127
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 369..443

Blast
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BLAST of TCONS_00073362-protein vs. Swiss-Prot (Human)
Match: TAD2B (Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2)

HSP 1 Score: 330.487 bits (846), Expect = 5.405e-110
Identity = 177/438 (40.41%), Postives = 265/438 (60.50%), Query Frame = 0 
Query:   20 AKYHCNYCHADCSGLRVSCAECPDFDACIQCFASGAEMGNHKRGHDYHLIDNGTFYL----IVKGWTADEEMLLLDAIEQHGLGNWDDISDHVG-TKSPQEAQDHFEEVYLKKNIGKVTLPKSVSH-IPDHASVEG-QLSPTLLKPMESLDLPVAEQQELGYMMFRDDFEREYDNDAENLIKTLVCSRDDDELETALKLQLADMYWRVLHERSRWKKIARDYGLITS------KHRLIASRRKLSKEDREFKDKIRPFAQFVQPQQWEELVNNRIRERELKARIKELTKYRRYGIKKLTGCQEYEDLKTQRERKKENRKRMQVISPPRTTKTSGK-KEFSSDDSRKKDDIDIATKEFEEFKEKMSSDTSFQLLSDKEKHLCATVQLRCSRYMTLKSYLLNEYASSRMKIPHKTKPPHYLTPSLRLALQEFFIQCGWIS 443
             K +C YC A+ S LR  C EC D + C +CF++GAE+G+H+R H Y L+D G F L       GWT+ EE LLLDAIEQ G GNW+D++ HVG +++PQE  +H+  +Y+  N+GK  +P ++ + + DH    G  LSP+L  P+  LD+ VAEQQ+LGYM  RDD+E EYD DAE LI  L  + DDD++E  LK    DMY R L ER R K IARDY L+ +      K +  A +RK++KE++E + K+RP  QF+  +++++L  N  +E+ L+A+I+EL +YRR GI K+    EYE  + +RE++KEN+     ++  +  K  GK  EF++                      + +   F+LLSD+EK LC+++ L  +RY+T+K+ ++ ++   R  IP K++ P YL   L+  +  F  + GWIS
Sbjct:    5 GKKYCVYCLAEVSPLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPDTIPNRVTDHTCPSGGPLSPSLTTPLPPLDISVAEQQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHKREKRKENKN----LAGSKRGKEDGKDSEFAA----------------------IENLPGFELLSDREKVLCSSLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESGWIS 416
The following BLAST results are available for this feature:
BLAST of TCONS_00073362-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAD2B5.405e-11040.41Transcriptional adapter 2-beta OS=Homo sapiens GN=... [more]
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